Guide to the Human Genome
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Name: RNASE1 Sequence: fasta or formatted (156aa) NCBI GI: 38201686
Description:

pancreatic ribonuclease precursor

Referenced in:

Pancreas and Insulin
RNases and RNA Stability

Other entries for this name:
alt mRNA [156aa] pancreatic ribonuclease precursor
alt mRNA [156aa] pancreatic ribonuclease precursor
alt mRNA [156aa] pancreatic ribonuclease precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          5           1
 C cysteine            5.1          8           1
 D aspartate           3.8          6           1
 E glutamate           4.5          7           1
 F phenylalanine       2.6          4           1
 G glycine             4.5          7           1
 H histidine           3.2          5           1
 I isoleucine          2.6          4           2
 K lysine              5.8          9           2
 L leucine             8.3         13           4
 M methionine          3.8          6           2
 N asparagine          5.8          9           1
 P proline             5.1          8           1
 Q glutamine           5.1          8           1
 R arginine            7.1         11           3
 S serine             11.5         18           4
 T threonine           5.1          8           1
 V valine              9.0         14           1
 W tryptophan          0.6          1           1
 Y tyrosine            3.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pancreatic ribonuclease precursor 
RNASE1                1.000   pancreatic ribonuclease precursor 
RNASE1                1.000   pancreatic ribonuclease precursor 
RNASE1                1.000   pancreatic ribonuclease precursor 
RNASE4                0.398   ribonuclease, RNase A family, 4 precursor 
RNASE4                0.398   ribonuclease, RNase A family, 4 precursor 
RNASE7                0.224   ribonuclease, RNase A family, 7 
ANG                   0.211   angiogenin, ribonuclease, RNase A family, 5 precurs...
ANG                   0.211   angiogenin, ribonuclease, RNase A family, 5 precursor...
RNASE6                0.204   ribonuclease, RNase A family, k6 
RNASE8                0.197   ribonuclease, RNase A family, 8 
RNASE12               0.154   ribonuclease, RNase A family, 12 (non-active) 
RNASE2                0.151   ribonuclease, RNase A family, 2 (liver, eosinophil-de...
RNASE3                0.147   ribonuclease, RNase A family, 3 (eosinophil cationic...
RNASE10               0.107   ribonuclease, RNase A family, 10 (non-active) 
RNASE9                0.080   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.080   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.080   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.080   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.080   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.080   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.080   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE13               0.060   ribonuclease, RNase A family, 13 (non-active) 
RNASE11               0.027   ribonuclease, RNase A family, 11 (non-active) 
ZNF816A               0.017   zinc finger protein 816A 
L1CAM                 0.017   L1 cell adhesion molecule isoform 3 precursor [Homo...
L1CAM                 0.017   L1 cell adhesion molecule isoform 2 precursor 
L1CAM                 0.017   L1 cell adhesion molecule isoform 1 precursor 
LRP2                  0.013   low density lipoprotein-related protein 2 
CENPC1                0.013   centromere protein C 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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