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Search of human proteins with 157739932
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157739932 mesogenin 1 [Homo sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157739932 mesogenin 1 [Homo sapiens] 391 e-109
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 79 3e-15
gi|14149724 mesoderm posterior 1 [Homo sapiens] 75 3e-14
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 59 3e-09
gi|153792190 neurogenic differentiation 4 [Homo sapiens] 56 2e-08
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 53 1e-07
gi|31077092 neurogenin 2 [Homo sapiens] 51 5e-07
gi|27475985 neurogenic differentiation 6 [Homo sapiens] 50 1e-06
gi|68989258 neurogenin 3 [Homo sapiens] 47 1e-05
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 47 1e-05
gi|116805332 musculin [Homo sapiens] 46 2e-05
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 45 4e-05
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 44 1e-04
gi|4507741 twist [Homo sapiens] 43 2e-04
gi|10190680 ASCL3 [Homo sapiens] 42 4e-04
gi|38455396 neurogenin 1 [Homo sapiens] 41 6e-04
gi|148922889 scleraxis homolog B [Homo sapiens] 40 0.001
gi|186972126 scleraxis homolog A [Homo sapiens] 40 0.001
gi|206597481 achaete-scute complex-like 4 [Homo sapiens] 40 0.001
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 40 0.001
gi|57529222 basic helix-loop-helix domain containing, class B, 4... 39 0.004
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 39 0.004
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 39 0.004
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 39 0.004
gi|18765727 myogenin [Homo sapiens] 38 0.005
gi|4505299 myogenic factor 6 [Homo sapiens] 38 0.005
gi|17981708 twist homolog 2 [Homo sapiens] 38 0.006
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 37 0.008
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 37 0.008
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 37 0.008
>gi|157739932 mesogenin 1 [Homo sapiens]
Length = 193
Score = 391 bits (1004), Expect = e-109
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MDNLRETFLSLEDGLGSSDSPGLLSSWDWKDRAGPFELNQASPSQSLSPAPSLESYSSSP 60
MDNLRETFLSLEDGLGSSDSPGLLSSWDWKDRAGPFELNQASPSQSLSPAPSLESYSSSP
Sbjct: 1 MDNLRETFLSLEDGLGSSDSPGLLSSWDWKDRAGPFELNQASPSQSLSPAPSLESYSSSP 60
Query: 61 CPAVAGLPCEHGGASSGGSEGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVR 120
CPAVAGLPCEHGGASSGGSEGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVR
Sbjct: 61 CPAVAGLPCEHGGASSGGSEGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVR 120
Query: 121 MSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTD 180
MSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTD
Sbjct: 121 MSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTD 180
Query: 181 LLNRGREPRAQSA 193
LLNRGREPRAQSA
Sbjct: 181 LLNRGREPRAQSA 193
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 78.6 bits (192), Expect = 3e-15
Identities = 56/142 (39%), Positives = 67/142 (47%), Gaps = 27/142 (19%)
Query: 46 SLSPAPSLESYSSSPCPAVAGLPCEHGGASSGGSEGCSVGGASGLVEVDYNMLAFQPTHL 105
S SPA S +S S PC GLP CS A A T
Sbjct: 30 STSPASSSDSSGSCPCDGARGLPQPQ-------PPSCSSRAAE----------AAATTPR 72
Query: 106 QGGGGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKI 165
+ GP + R+ ASEREKLRMRTLA ALH LR +LPP + GQ LTKI
Sbjct: 73 RARTGPAGGQ----------RQSASEREKLRMRTLARALHELRRFLPPSLAPAGQSLTKI 122
Query: 166 QTLKYTIKYIGELTDLLNRGRE 187
+TL+ I+YIG L+ +L E
Sbjct: 123 ETLRLAIRYIGHLSAVLGLSEE 144
>gi|14149724 mesoderm posterior 1 [Homo sapiens]
Length = 268
Score = 75.1 bits (183), Expect = 3e-14
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 120 RMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELT 179
R+ +R+ ASEREKLRMRTLA ALH LR +LPP + GQ LTKI+TL+ I+YIG L+
Sbjct: 78 RLGSGQRQSASEREKLRMRTLARALHELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLS 137
Query: 180 DLLNRGRE 187
+L E
Sbjct: 138 AVLGLSEE 145
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 58.9 bits (141), Expect = 3e-09
Identities = 62/190 (32%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 7 TFLSLEDGLGSSDSPGLLSSWDWKDRAGPFELNQASPSQSLSPAPSLESYSSSPCPAVAG 66
T L E GL SD P S D +D + A P +P P +P PA A
Sbjct: 3 TRLFSEPGL-LSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPG------APGPARAA 55
Query: 67 LPCEHGGASSGGS------EGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVR 120
P G + E +GG E + L GPK +K TK R
Sbjct: 56 KPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKAR 115
Query: 121 M--SVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGEL 178
+ S RR+KA+ RE+ RM L AL LR + P YS + Q L+KI+TL+ YI L
Sbjct: 116 LERSKLRRQKANARERNRMHDLNAALDNLRKVV-PCYS-KTQKLSKIETLRLAKNYIWAL 173
Query: 179 TDLLNRGREP 188
+++L G+ P
Sbjct: 174 SEILRSGKRP 183
>gi|153792190 neurogenic differentiation 4 [Homo sapiens]
Length = 331
Score = 55.8 bits (133), Expect = 2e-08
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 110 GPKAQKGTKVRMSVQRRR--KASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQT 167
GPK +K TK R+ R R KA+ RE+ RM L DAL LR + P YS + Q L+KI+T
Sbjct: 71 GPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVM-PCYS-KTQKLSKIET 128
Query: 168 LKYTIKYIGELTDLLNRGREPRAQ 191
L+ YI L+++L G+ P +
Sbjct: 129 LRLARNYIWALSEVLETGQTPEGK 152
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 53.1 bits (126), Expect = 1e-07
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 110 GPKAQKGTKVRMS--VQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQT 167
GPK +K TK R+ RR KA+ RE+ RM L AL LR +P YS+ Q L+KI+T
Sbjct: 85 GPKKKKMTKARLERFKLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKT-QKLSKIET 142
Query: 168 LKYTIKYIGELTDLLNRGREP 188
L+ YI L+++L G+ P
Sbjct: 143 LRLAKNYIWALSEILRSGKSP 163
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 51.2 bits (121), Expect = 5e-07
Identities = 48/155 (30%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 38 LNQASPS-QSLSPAPSLESYSSSPCPAVAGLPCEHGGASSG---------GSEGCSVGGA 87
L ASP+ +L+P S P +G GA +G G+EGC
Sbjct: 20 LGSASPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARL 79
Query: 88 SGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHTL 147
GLV + +P+ + T R+ RR KA+ RE+ RM L AL L
Sbjct: 80 LGLV----HDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDAL 135
Query: 148 RNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLL 182
R LP LTKI+TL++ YI LT+ L
Sbjct: 136 REVLPTF--PEDAKLTKIETLRFAHNYIWALTETL 168
>gi|27475985 neurogenic differentiation 6 [Homo sapiens]
Length = 337
Score = 50.1 bits (118), Expect = 1e-06
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 110 GPKAQKGTKVRMSVQ--RRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQT 167
G + +K TK+R+ RR++A+ RE+ RM L DAL LR + P YS + Q L+KI+T
Sbjct: 78 GLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKVV-PCYS-KTQKLSKIET 135
Query: 168 LKYTIKYIGELTDLLNRGREP 188
L+ YI L+++L G+ P
Sbjct: 136 LRLAKNYIWALSEILRIGKRP 156
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 47.0 bits (110), Expect = 1e-05
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 102 PTHLQGGGGPKAQKGTKVRMSVQRR---RKASEREKLRMRTLADALHTLRNYLPPVYSQR 158
P L+ G +++ +++ +S QRR +KA++RE+ RM L AL LR LP
Sbjct: 58 PRKLRARRGGRSRPKSELALSKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTFPDD- 116
Query: 159 GQPLTKIQTLKYTIKYIGELTDLL 182
LTKI+TL++ YI LT L
Sbjct: 117 -AKLTKIETLRFAHNYIWALTQTL 139
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 47.0 bits (110), Expect = 1e-05
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 38 LNQASPSQSLSPAPSLESYSSSPCPAVAGLPCEHGGASSGGSEGCSVGGASGLVEVDYNM 97
L A P+ L+ AP P G C GA GG S L
Sbjct: 70 LQPAPPAAPLALAPPSSGGLGEPDDGGGGGYCCETGAPPGGFPYSPGSPPSCLAYPCAGA 129
Query: 98 LAFQP----THLQGGGGPKAQKGTKVRMSV---QRRRKASEREKLRMRTLADALHTLRNY 150
P L G A++ +VR Q R+ A+ RE+ RM+++ DA LR++
Sbjct: 130 AVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEGLRSH 189
Query: 151 LPPV-YSQRGQPLTKIQTLKYTIKYIGELTDLL 182
+P + Y +R L+K+ TL+ I YI L++L+
Sbjct: 190 IPTLPYEKR---LSKVDTLRLAIGYINFLSELV 219
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 45.8 bits (107), Expect = 2e-05
Identities = 42/155 (27%), Positives = 58/155 (37%), Gaps = 27/155 (17%)
Query: 37 ELNQASPSQSLS-----PAPSLESYSSSPCPAVAGLPCEHGGASSGGSEGCSVGGASGLV 91
E + ASPS + S P E + + G + + GG G S GG
Sbjct: 35 ERSYASPSDNSSAEEEDPDGEEERCALGTAGSAEGCKRKRPRVAGGGGAGGSAGG----- 89
Query: 92 EVDYNMLAFQPTHLQGGGGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHTLRNYL 151
GG P KG+ +R A+ RE+ RMR L+ A L+ L
Sbjct: 90 ---------------GGKKPLPAKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSL 134
Query: 152 PPVYSQRGQPLTKIQTLKYTIKYIGELTDLLNRGR 186
P + L+K+ TL+ YI L LL R
Sbjct: 135 P--WVPPDTKLSKLDTLRLASSYIAHLRQLLQEDR 167
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 45.1 bits (105), Expect = 4e-05
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 18/140 (12%)
Query: 40 QASPSQSLSPAPSLESYSSSPCPAVAGLPCEH-GGASSGGSEGCSVGGASGLVEVDYNML 98
+ASP A + E S++ A +P GG GGS S GG G
Sbjct: 168 RASPGAGGGGAKAAEGCSNAHLHGGASVPPGGLGGGGGGGSSSGSSGGGGGSGS------ 221
Query: 99 AFQPTHLQGGGGPKAQKGTKVRMSVQR---RRKASEREKLRMRTLADALHTLRNYLPPVY 155
G GG + + + S ++ R + RE+ RM L DAL LR +P +
Sbjct: 222 --------GSGGSSSSSSSSSKKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAH 273
Query: 156 SQRGQPLTKIQTLKYTIKYI 175
S + L+KI TL YI
Sbjct: 274 SPSVRKLSKIATLLLAKNYI 293
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 43.5 bits (101), Expect = 1e-04
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 107 GGGGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQ 166
G GP ++ + S+QRR +++ERE+ RM L +A LR +P V + + L+KI+
Sbjct: 62 GPSGPGGRRDS----SIQRRLESNERERQRMHKLNNAFQALREVIPHVRADK--KLSKIE 115
Query: 167 TLKYTIKYIGELT 179
TL YI LT
Sbjct: 116 TLTLAKNYIKSLT 128
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 42.7 bits (99), Expect = 2e-04
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 72 GGASSGGSEGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTK--------VRMSV 123
GGA GG+ G VGG + GGGG G+
Sbjct: 48 GGAGPGGAAGGGVGGGDEPGSPAQGKRGKKSAGCGGGGGAGGGGGSSSGGGSPQSYEELQ 107
Query: 124 QRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLL 182
+R A+ RE+ R ++L +A LR +P + S + L+KIQTLK +YI L +L
Sbjct: 108 TQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDK---LSKIQTLKLAARYIDFLYQVL 163
>gi|10190680 ASCL3 [Homo sapiens]
Length = 181
Score = 41.6 bits (96), Expect = 4e-04
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 127 RKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLL 182
RK +ERE+ R++ + + LR++LP Y ++ L+K++TL+ IKYI L LL
Sbjct: 96 RKRNERERQRVKCVNEGYAQLRHHLPEEYLEK--RLSKVETLRAAIKYINYLQSLL 149
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 41.2 bits (95), Expect = 6e-04
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 125 RRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLL 182
RR KA++RE+ RM L AL LR+ LP LTKI+TL++ YI L + L
Sbjct: 93 RRVKANDRERNRMHNLNAALDALRSVLPSFPDDT--KLTKIETLRFAYNYIWALAETL 148
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 107 GGGGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQ 166
GGGGP + G + R +R A+ RE+ R ++ A LR +P + R L+KI+
Sbjct: 62 GGGGPGGRPGREPR----QRHTANARERDRTNSVNTAFTALRTLIPTEPADR--KLSKIE 115
Query: 167 TLKYTIKYIGELTDLLNRG 185
TL+ YI L ++L G
Sbjct: 116 TLRLASSYISHLGNVLLAG 134
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 107 GGGGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQ 166
GGGGP + G + R +R A+ RE+ R ++ A LR +P + R L+KI+
Sbjct: 62 GGGGPGGRPGREPR----QRHTANARERDRTNSVNTAFTALRTLIPTEPADR--KLSKIE 115
Query: 167 TLKYTIKYIGELTDLLNRG 185
TL+ YI L ++L G
Sbjct: 116 TLRLASSYISHLGNVLLAG 134
>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
Length = 173
Score = 40.0 bits (92), Expect = 0.001
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 127 RKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLNR 184
RK +ERE+ R+R + + LR++LP + + L+K++TL+ I YI L +LL R
Sbjct: 76 RKRNERERQRVRCVNEGYARLRDHLPRELADK--RLSKVETLRAAIDYIKHLQELLER 131
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 40.0 bits (92), Expect = 0.001
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 87 ASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHT 146
ASG +D++ P G GP G + V+RR A+ +E+ R +++ A
Sbjct: 69 ASGAAGLDHSHYGGVPP----GAGPPGLGGPR---PVKRRGTANRKERRRTQSINSAFAE 121
Query: 147 LRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLL 182
LR +P V + L+KI+TL+ YI L DLL
Sbjct: 122 LRECIPNVPADT--KLSKIKTLRLATSYIAYLMDLL 155
>gi|57529222 basic helix-loop-helix domain containing, class B, 4
[Homo sapiens]
Length = 225
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 17/118 (14%)
Query: 58 SSPCPAVAGLPCEHGGASSGGSEGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGT 117
++P P E G SG + AF+ + G G A
Sbjct: 51 AAPAPRAPAQAAESSGEQSGDEDD-----------------AFEQRRRRRGPGSAADGRR 93
Query: 118 KVRMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYI 175
+ R R + RE+ RM L DAL LR +P +S + L+KI TL YI
Sbjct: 94 RPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYI 151
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 30 KDRAGPFELNQASPSQSLSPAPSLESYSSSPCPAVAGLPCEHG-GASSGGSEGCSVGGAS 88
++ +G L A LSP+ + E + S G G GA GG G S GG +
Sbjct: 16 EEESGKEVLGSAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGA 75
Query: 89 GLVEVDYNMLAFQPTHLQGGGGPKAQK----GTKVRMSVQRRRKASEREKLRMRTLADAL 144
G QP+ GGG P + K + ++R +K E K R++ +
Sbjct: 76 G---------GLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVM 126
Query: 145 ----HTLRNYLPPVYSQRGQPLTK--IQTLK 169
+ P ++R Q ++K +QT+K
Sbjct: 127 RCIAYPFNAKQPTDMARRQQKISKQQLQTVK 157
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 30 KDRAGPFELNQASPSQSLSPAPSLESYSSSPCPAVAGLPCEHG-GASSGGSEGCSVGGAS 88
++ +G L A LSP+ + E + S G G GA GG G S GG +
Sbjct: 16 EEESGKEVLGSAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGA 75
Query: 89 GLVEVDYNMLAFQPTHLQGGGGPKAQK----GTKVRMSVQRRRKASEREKLRMRTLADAL 144
G QP+ GGG P + K + ++R +K E K R++ +
Sbjct: 76 G---------GLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVM 126
Query: 145 ----HTLRNYLPPVYSQRGQPLTK--IQTLK 169
+ P ++R Q ++K +QT+K
Sbjct: 127 RCIAYPFNAKQPTDMARRQQKISKQQLQTVK 157
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 30 KDRAGPFELNQASPSQSLSPAPSLESYSSSPCPAVAGLPCEHG-GASSGGSEGCSVGGAS 88
++ +G L A LSP+ + E + S G G GA GG G S GG +
Sbjct: 16 EEESGKEVLGSAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGA 75
Query: 89 GLVEVDYNMLAFQPTHLQGGGGPKAQK----GTKVRMSVQRRRKASEREKLRMRTLADAL 144
G QP+ GGG P + K + ++R +K E K R++ +
Sbjct: 76 G---------GLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVM 126
Query: 145 ----HTLRNYLPPVYSQRGQPLTK--IQTLK 169
+ P ++R Q ++K +QT+K
Sbjct: 127 RCIAYPFNAKQPTDMARRQQKISKQQLQTVK 157
>gi|18765727 myogenin [Homo sapiens]
Length = 224
Score = 38.1 bits (87), Expect = 0.005
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 102 PTHLQGGGGPKAQKGTKVR-MSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQ 160
P H G P A K K + +SV RRR A+ REK R++ + +A L+ Q
Sbjct: 58 PEHCPGQCLPWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALKR---STLLNPNQ 114
Query: 161 PLTKIQTLKYTIKYIGELTDLLN 183
L K++ L+ I+YI L LL+
Sbjct: 115 RLPKVEILRSAIQYIERLQALLS 137
>gi|4505299 myogenic factor 6 [Homo sapiens]
Length = 242
Score = 38.1 bits (87), Expect = 0.005
Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 25/151 (16%)
Query: 35 PFELNQASPSQSLSPAPSLESYSSSPCPAVAGLPCEHGGASSGGSEGCSVGGASGLVEVD 94
P E+ + SP S + SPC +P E G SSG + G
Sbjct: 24 PLEVAEGSPLYPGSDG------TLSPCQDQ--MPPEAGSDSSGEEHVLAPPG-------- 67
Query: 95 YNMLAFQPTHLQGGGGPKAQKGTKVRMSVQRRRKASE-REKLRMRTLADALHTLRNYLPP 153
QP H G A K K + + RRKA+ RE+ R++ + +A L+
Sbjct: 68 -----LQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVA 122
Query: 154 VYSQRGQPLTKIQTLKYTIKYIGELTDLLNR 184
+QR L K++ L+ I YI L DLL+R
Sbjct: 123 NPNQR---LPKVEILRSAISYIERLQDLLHR 150
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 37.7 bits (86), Expect = 0.006
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 109 GGPKAQKGTKVRMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTL 168
G P AQ +++ +R A+ RE+ R ++L +A LR +P + S + L+KIQTL
Sbjct: 54 GSPSAQSFEELQ---SQRILANVRERQRTQSLNEAFAALRKIIPTLPSDK---LSKIQTL 107
Query: 169 KYTIKYIGELTDLL 182
K +YI L +L
Sbjct: 108 KLAARYIDFLYQVL 121
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 127 RKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLN 183
+K +ERE+ R++ + + LR +LP +++ L+K++TL+ I+YI L +LL+
Sbjct: 193 QKRNERERQRVKCVNEGYARLRGHLPGALAEKR--LSKVETLRAAIRYIKYLQELLS 247
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 127 RKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLN 183
+K +ERE+ R++ + + LR +LP +++ L+K++TL+ I+YI L +LL+
Sbjct: 193 QKRNERERQRVKCVNEGYARLRGHLPGALAEKR--LSKVETLRAAIRYIKYLQELLS 247
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 127 RKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLN 183
+K +ERE+ R++ + + LR +LP +++ L+K++TL+ I+YI L +LL+
Sbjct: 193 QKRNERERQRVKCVNEGYARLRGHLPGALAEKR--LSKVETLRAAIRYIKYLQELLS 247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,334,679
Number of Sequences: 37866
Number of extensions: 430322
Number of successful extensions: 2253
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 2109
Number of HSP's gapped (non-prelim): 232
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.