Guide to the Human Genome
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Name: PLXNA4 Sequence: fasta or formatted (522aa) NCBI GI: 157738643
Description:

plexin A4 isoform 2

Referenced in:

Semaphorins

Other entries for this name:
alt prot [1894aa] plexin A4 isoform 1
alt prot [492aa] plexin A4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         24           2
 C cysteine            2.9         15           2
 D aspartate           5.7         30           3
 E glutamate           5.2         27           1
 F phenylalanine       4.6         24           1
 G glycine             7.5         39           2
 H histidine           1.9         10           1
 I isoleucine          5.2         27           2
 K lysine              6.5         34           2
 L leucine            10.5         55           2
 M methionine          2.5         13           1
 N asparagine          4.0         21           2
 P proline             5.2         27           2
 Q glutamine           3.4         18           1
 R arginine            4.0         21           1
 S serine              8.2         43           2
 T threonine           5.7         30           3
 V valine              7.3         38           2
 W tryptophan          0.8          4           1
 Y tyrosine            4.2         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   plexin A4 isoform 2 
PLXNA4                0.874   plexin A4 isoform 1 
PLXNA4                0.871   plexin A4 isoform 3 
PLXNA2                0.484   plexin A2 
PLXNA1                0.430   plexin A1 
PLXNA3                0.420   plexin A3 
PLXNB2                0.127   plexin B2 
MET                   0.103   met proto-oncogene isoform b precursor 
MET                   0.103   met proto-oncogene isoform a precursor 
PLXNB3                0.092   plexin B3 isoform 2 
PLXNB3                0.092   plexin B3 isoform 1 
PLXNB1                0.091   plexin B1 
PLXNB1                0.091   plexin B1 
PLXND1                0.061   plexin D1 
MST1R                 0.049   macrophage stimulating 1 receptor precursor 
SEMA4B                0.029   semaphorin 4B precursor 
SEMA4B                0.029   semaphorin 4B precursor 
SEMA4A                0.013   semaphorin B 
SEMA6B                0.011   semaphorin 6B precursor 
SEMA3A                0.008   semaphorin 3A precursor 
SEMA3G                0.007   semaphorin sem2 
ZCCHC2                0.006   zinc finger, CCHC domain containing 2 
GOLGB1                0.005   golgi autoantigen, golgin subfamily b, macrogolgin ...
C22orf28              0.004   hypothetical protein LOC51493 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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