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Search of human proteins with 157671913
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157671913 notch1-induced protein isoform b [Homo sapiens]
(401 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157671913 notch1-induced protein isoform b [Homo sapiens] 795 0.0
gi|157412259 notch1-induced protein isoform a [Homo sapiens] 772 0.0
gi|116686122 kinesin family member 4 [Homo sapiens] 38 0.014
gi|9966779 eukaryotic translation initiation factor 2B, subunit ... 34 0.27
gi|157504499 ankyrin repeat domain 47 [Homo sapiens] 32 0.78
gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens] 32 1.0
gi|109638749 signal recognition particle 72kDa [Homo sapiens] 32 1.0
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 31 1.7
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 31 1.7
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 31 1.7
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 31 1.7
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 31 1.7
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 31 1.7
gi|154800453 tastin isoform 1 [Homo sapiens] 31 1.7
gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens] 31 1.7
gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens] 31 1.7
gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens] 31 1.7
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 31 1.7
gi|157502184 kinesin family member 6 [Homo sapiens] 31 2.3
gi|169216092 PREDICTED: similar to hCG2038853 [Homo sapiens] 30 3.0
gi|169215887 PREDICTED: similar to hCG2038853 [Homo sapiens] 30 3.0
gi|169215666 PREDICTED: similar to hCG2038853 [Homo sapiens] 30 3.0
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 30 3.0
gi|8051586 ficolin 2 isoform b precursor [Homo sapiens] 30 3.0
gi|61744445 ficolin 2 isoform a precursor [Homo sapiens] 30 3.0
gi|194272172 double homeobox, 4 [Homo sapiens] 30 3.0
gi|194272217 double homeobox, 4-like [Homo sapiens] 30 3.0
gi|194272216 double homeobox, 4-like [Homo sapiens] 30 3.0
gi|194272215 double homeobox, 4-like [Homo sapiens] 30 3.0
gi|194272192 double homeobox, 4-like [Homo sapiens] 30 3.0
>gi|157671913 notch1-induced protein isoform b [Homo sapiens]
Length = 401
Score = 795 bits (2054), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 1 MEAGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERM 60
MEAGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERM
Sbjct: 1 MEAGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERM 60
Query: 61 GVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLV 120
GVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLV
Sbjct: 61 GVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLV 120
Query: 121 EAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGCS 180
EAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGCS
Sbjct: 121 EAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGCS 180
Query: 181 DYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMD 240
DYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMD
Sbjct: 181 DYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMD 240
Query: 241 TEEDNKHVGHLLEEVLKSELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQE 300
TEEDNKHVGHLLEEVLKSELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQE
Sbjct: 241 TEEDNKHVGHLLEEVLKSELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQE 300
Query: 301 TQKLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYG 360
TQKLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYG
Sbjct: 301 TQKLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYG 360
Query: 361 LLISYPQDDQKLQESLRQGAIIIASLIKERNSGLIGQLLIA 401
LLISYPQDDQKLQESLRQGAIIIASLIKERNSGLIGQLLIA
Sbjct: 361 LLISYPQDDQKLQESLRQGAIIIASLIKERNSGLIGQLLIA 401
>gi|157412259 notch1-induced protein isoform a [Homo sapiens]
Length = 451
Score = 772 bits (1993), Expect = 0.0
Identities = 401/451 (88%), Positives = 401/451 (88%), Gaps = 50/451 (11%)
Query: 1 MEAGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERM 60
MEAGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERM
Sbjct: 1 MEAGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERM 60
Query: 61 GVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLV 120
GVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLV
Sbjct: 61 GVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLV 120
Query: 121 EAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHG-- 178
EAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHG
Sbjct: 121 EAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGAA 180
Query: 179 ------------------------------------------------CSDYDLEFGTEC 190
CSDYDLEFGTEC
Sbjct: 181 GAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCSDYDLEFGTEC 240
Query: 191 LQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGH 250
LQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGH
Sbjct: 241 LQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGH 300
Query: 251 LLEEVLKSELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQETQKLLSMLEE 310
LLEEVLKSELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQETQKLLSMLEE
Sbjct: 301 LLEEVLKSELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQETQKLLSMLEE 360
Query: 311 SSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQ 370
SSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQ
Sbjct: 361 SSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQ 420
Query: 371 KLQESLRQGAIIIASLIKERNSGLIGQLLIA 401
KLQESLRQGAIIIASLIKERNSGLIGQLLIA
Sbjct: 421 KLQESLRQGAIIIASLIKERNSGLIGQLLIA 451
>gi|116686122 kinesin family member 4 [Homo sapiens]
Length = 1232
Score = 38.1 bits (87), Expect = 0.014
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 210 DLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGHLLEE--VLKSELNHVKVTS 267
D K T R + + +K + EI V++ TEE +H+ LLE+ +L ++ +K
Sbjct: 726 DKRKETQSRGMEGTAARVKNWLGNEIEVMVSTEEAKRHLNDLLEDRKILAQDVAQLKEKK 785
Query: 268 EALGHAGRHLQQIILDQCYNFVCVNVTTSDFQET-QKLLSMLEESSLCILYPVVVVSVHF 326
E +G + + + ++ V S+ +++ K + LE + +
Sbjct: 786 E----SGENPPPKLRRRTFSLTEVRGQVSESEDSITKQIESLETEMEFRSAQIADLQQKL 841
Query: 327 LDFKLVP-PSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQKLQESLRQGAIIIAS 385
LD + P Q+ EN+ I E +K L G L+S KL+ SL+Q A
Sbjct: 842 LDAESEDRPKQRWENIATILEAKCALK----YLIGELVSSKIQVSKLESSLKQSKTSCAD 897
Query: 386 ----LIKERN 391
L +ERN
Sbjct: 898 MQKMLFEERN 907
>gi|9966779 eukaryotic translation initiation factor 2B, subunit 3
gamma [Homo sapiens]
Length = 452
Score = 33.9 bits (76), Expect = 0.27
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 49 AVLPAGGCGERMGVPT---PKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVM 105
AV+ A G G RM T PK P+ +PLI Y L LERV + + IVV +V
Sbjct: 5 AVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVT----TRDVQ 60
Query: 106 KSIIQKYQHK 115
K++ +++ K
Sbjct: 61 KALCAEFKMK 70
>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
Length = 821
Score = 32.3 bits (72), Expect = 0.78
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 4 GPPGSARPAEPGPCLSGQRG-ADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERMGV 62
GPP S RP P P L+G R T+S SL S G PG Q + L R V
Sbjct: 66 GPPTSRRPRAPRPGLAGARSPGAWTSSESLASDDGGAPGILSQGAPSGLLMQPLSPRAPV 125
Query: 63 PTPK 66
P+
Sbjct: 126 RNPR 129
>gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens]
Length = 3996
Score = 32.0 bits (71), Expect = 1.0
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 259 ELNHVKVTSEALGHAGRHLQQIILDQCYNFV-CVNVTTSDFQETQKLLSMLEESSLCILY 317
E +H ++ E L + L+ ++ + C C V+ DFQ KLLS + +S C+ Y
Sbjct: 396 EDDHYRLNDELLHYI---LKIVVRESCILITKCQTVSKDDFQ---KLLSTVPAASSCLRY 449
Query: 318 PVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQKLQESLR 377
+ V + + L+ P + ++ ++ +V+E + + L ++ E L+
Sbjct: 450 LMAVQNHLLSNTILIKPDENDDSDSSLQGETLKVQELKVSILALATQILTGCDEVLEMLQ 509
Query: 378 Q-GAIIIASLIKERNSGLIG 396
Q +I S I +R L G
Sbjct: 510 QVTTALINSDIADREQRLKG 529
>gi|109638749 signal recognition particle 72kDa [Homo sapiens]
Length = 671
Score = 32.0 bits (71), Expect = 1.0
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 12/172 (6%)
Query: 145 KLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHG--CSDYDLEFGTECLQLALKYCCTKA 202
+++K +V +H V ++ G + + H ++ L F + L
Sbjct: 39 QINKDDVTALHCKVVCLIQNGSFKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIENAL 98
Query: 203 KLVEGS---PDLWKVTYKRDLYAAESIIKERISQEICVVMDTEED-NKHVGHLLEEVLKS 258
K +E + D K Y + LY E E ++ +V ++++D ++ L V+ +
Sbjct: 99 KTIESANQQTDKLKELYGQVLYRLERY-DECLAVYRDLVRNSQDDYDEERKTNLSAVVAA 157
Query: 259 ELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQETQKLLSMLEE 310
+ N KV E LG LQ+ + CYN C + + K+L E+
Sbjct: 158 QSNWEKVVPENLG-----LQEGTHELCYNTACALIGQGQLNQAMKILQKAED 204
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 16/80 (20%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 ---------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASARQGQMQGIPAPSQ 416
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 16/80 (20%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 ---------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASARQGQMQGIPAPSQ 416
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 16/80 (20%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 ---------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASARQGQMQGIPAPSQ 416
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 16/80 (20%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 ---------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASARQGQMQGIPAPSQ 416
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 16/80 (20%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 ---------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASARQGQMQGIPAPSQ 416
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 16/80 (20%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 ---------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASARQGQMQGIPAPSQ 416
>gi|154800453 tastin isoform 1 [Homo sapiens]
Length = 778
Score = 31.2 bits (69), Expect = 1.7
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 2 EAGPPGSARPAEPGPCLSGQRGADHTASASLQ---SVAGTEPGRHPQAVAAV------LP 52
E G P PAEPGP + R SLQ V P P+ + + +P
Sbjct: 508 ECGEPQPCPPAEPGPPEAFCRSEPEIPEPSLQEQLEVPEPYPPAEPRPLESCCRSEPEIP 567
Query: 53 AGGCGERMGVPTPKQFCPILE-RPLISY 79
E++ VP P CP E RPL SY
Sbjct: 568 ESSRQEQLEVPEP---CPPAEPRPLESY 592
>gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens]
Length = 220
Score = 31.2 bits (69), Expect = 1.7
Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 30/136 (22%)
Query: 120 VEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGC 179
V+ GV GL E+++ ++L+K E EE V L+ V AAKE C
Sbjct: 27 VDTGVAARTPAVEGLTEAEEEELRAELTKVE------------EEIVTLRQVLAAKERHC 74
Query: 180 SDYDLEFGTECL--------------QLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAES 225
+ G L Q++ Y T KL E + KVT + DLY
Sbjct: 75 GELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNE---KVT-QSDLYKKTQ 130
Query: 226 IIKERISQEICVVMDT 241
+ Q+ + T
Sbjct: 131 ETLSQAGQKTSAALST 146
>gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens]
Length = 206
Score = 31.2 bits (69), Expect = 1.7
Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 30/136 (22%)
Query: 120 VEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGC 179
V+ GV GL E+++ ++L+K E EE V L+ V AAKE C
Sbjct: 27 VDTGVAARTPAVEGLTEAEEEELRAELTKVE------------EEIVTLRQVLAAKERHC 74
Query: 180 SDYDLEFGTECL--------------QLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAES 225
+ G L Q++ Y T KL E + KVT + DLY
Sbjct: 75 GELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNE---KVT-QSDLYKKTQ 130
Query: 226 IIKERISQEICVVMDT 241
+ Q+ + T
Sbjct: 131 ETLSQAGQKTSAALST 146
>gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens]
Length = 229
Score = 31.2 bits (69), Expect = 1.7
Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 30/136 (22%)
Query: 120 VEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGC 179
V+ GV GL E+++ ++L+K E EE V L+ V AAKE C
Sbjct: 27 VDTGVAARTPAVEGLTEAEEEELRAELTKVE------------EEIVTLRQVLAAKERHC 74
Query: 180 SDYDLEFGTECL--------------QLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAES 225
+ G L Q++ Y T KL E + KVT + DLY
Sbjct: 75 GELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNE---KVT-QSDLYKKTQ 130
Query: 226 IIKERISQEICVVMDT 241
+ Q+ + T
Sbjct: 131 ETLSQAGQKTSAALST 146
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 31.2 bits (69), Expect = 1.7
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 3 AGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHP 44
AGPP SA PA+ G RGA + A S AG +P P
Sbjct: 872 AGPPTSALPAQRGLATFPSRGAKASPVAVGSSGAGADPSFQP 913
>gi|157502184 kinesin family member 6 [Homo sapiens]
Length = 814
Score = 30.8 bits (68), Expect = 2.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 20/87 (22%)
Query: 224 ESIIKERISQEICVVMDTEEDNKHVGHLLEEVLKSELNHVKVTSEALGHAGRHLQQIILD 283
+ I+K+R S+ + E +GHL EE+ + RH+QQ+ L
Sbjct: 579 KQILKQRFSEAKALGESINEARSKIGHLKEEITQ-----------------RHIQQVALG 621
Query: 284 QCYNFVCVNVTTSDFQETQKLLSMLEE 310
N V Q+ +KL S LEE
Sbjct: 622 ISENMA---VPLMPDQQEEKLRSQLEE 645
>gi|169216092 PREDICTED: similar to hCG2038853 [Homo sapiens]
Length = 191
Score = 30.4 bits (67), Expect = 3.0
Identities = 20/59 (33%), Positives = 25/59 (42%)
Query: 3 AGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERMG 61
+GP G ARPA L+ ++GA HT A A G Q A CG +G
Sbjct: 75 SGPTGKARPASESGPLTPRKGASHTPEAPGVGRAFRVQGTACQRPRAGTEGSRCGWCLG 133
>gi|169215887 PREDICTED: similar to hCG2038853 [Homo sapiens]
Length = 191
Score = 30.4 bits (67), Expect = 3.0
Identities = 20/59 (33%), Positives = 25/59 (42%)
Query: 3 AGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERMG 61
+GP G ARPA L+ ++GA HT A A G Q A CG +G
Sbjct: 75 SGPTGKARPASESGPLTPRKGASHTPEAPGVGRAFRVQGTACQRPRAGTEGSRCGWCLG 133
>gi|169215666 PREDICTED: similar to hCG2038853 [Homo sapiens]
Length = 191
Score = 30.4 bits (67), Expect = 3.0
Identities = 20/59 (33%), Positives = 25/59 (42%)
Query: 3 AGPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQAVAAVLPAGGCGERMG 61
+GP G ARPA L+ ++GA HT A A G Q A CG +G
Sbjct: 75 SGPTGKARPASESGPLTPRKGASHTPEAPGVGRAFRVQGTACQRPRAGTEGSRCGWCLG 133
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 -----------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASASARQGQMQGIPAPSQ 418
>gi|8051586 ficolin 2 isoform b precursor [Homo sapiens]
Length = 275
Score = 30.4 bits (67), Expect = 3.0
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 2 EAGPPG-SARPAEPGPCLSGQR 22
+AGPPG + P EP PCL+G R
Sbjct: 44 KAGPPGPNGAPGEPQPCLTGPR 65
>gi|61744445 ficolin 2 isoform a precursor [Homo sapiens]
Length = 313
Score = 30.4 bits (67), Expect = 3.0
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 2 EAGPPG-SARPAEPGPCLSGQR 22
+AGPPG + P EP PCL+G R
Sbjct: 82 KAGPPGPNGAPGEPQPCLTGPR 103
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 -----------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASASARQGQMQGIPAPSQ 418
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 -----------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASASARQGQMQGIPAPSQ 418
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 -----------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASASARQGQMQGIPAPSQ 418
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 -----------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASASARQGQMQGIPAPSQ 418
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 4 GPPGSARPAEPGPCLSGQRGADHTASASLQSVAGTEPGRHPQ-AVAAVLPAGGC------ 56
G PG A+PGP +G +G A + Q GR PQ A AA P G
Sbjct: 337 GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQP 396
Query: 57 -----------GERMGVPTPKQ 67
G+ G+P P Q
Sbjct: 397 APPDASASARQGQMQGIPAPSQ 418
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,198,260
Number of Sequences: 37866
Number of extensions: 674959
Number of successful extensions: 2777
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 2752
Number of HSP's gapped (non-prelim): 75
length of query: 401
length of database: 18,247,518
effective HSP length: 104
effective length of query: 297
effective length of database: 14,309,454
effective search space: 4249907838
effective search space used: 4249907838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.