Guide to the Human Genome
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Name: PBOV1 Sequence: fasta or formatted (135aa) NCBI GI: 11056010
Description:

prostate and breast cancer overexpressed 1

Referenced in:

Mammary Tissues
Prostate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7          5           1
 C cysteine            3.0          4           2
 D aspartate           1.5          2           1
 E glutamate           5.2          7           1
 F phenylalanine       4.4          6           1
 G glycine             2.2          3           1
 H histidine           5.2          7           2
 I isoleucine          8.9         12           2
 K lysine              8.1         11           2
 L leucine            15.6         21           2
 M methionine          3.0          4           1
 N asparagine          2.2          3           1
 P proline             4.4          6           1
 Q glutamine           5.9          8           1
 R arginine            5.9          8           1
 S serine              8.1         11           2
 T threonine           7.4         10           1
 V valine              2.2          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostate and breast cancer overexpressed 1 
ELP4                  0.020   elongation protein 4 homolog 
C6orf203              0.016   hypothetical protein LOC51250 isoform b 
C6orf203              0.016   hypothetical protein LOC51250 isoform a 
C6orf203              0.016   hypothetical protein LOC51250 isoform a 
TSC2                  0.016   tuberous sclerosis 2 isoform 1 
TSC2                  0.016   tuberous sclerosis 2 isoform 5 
PCLO                  0.012   piccolo isoform 1 
SIRPB1                0.008   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPG                 0.008   signal-regulatory protein gamma isoform 1 precursor ...
MLPH                  0.008   melanophilin isoform 1 
DSCAML1               0.008   Down syndrome cell adhesion molecule like 1 
CCL20                 0.004   chemokine (C-C motif) ligand 20 isoform 2 
TSEN54                0.004   tRNA splicing endonuclease 54 homolog 
WDR60                 0.004   WD repeat domain 60 
DOPEY2                0.004   pad-1-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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