Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 11036656
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
(793 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 1559 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 1188 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 1181 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 1179 0.0
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 1175 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 1172 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 1161 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 1161 0.0
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 1159 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 1146 0.0
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 1136 0.0
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 1135 0.0
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 1126 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 1123 0.0
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 1102 0.0
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 787 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 647 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 647 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 642 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 642 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 639 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 639 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 634 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 634 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 632 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 632 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 632 0.0
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs... 632 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 631 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 631 0.0
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 1559 bits (4036), Expect = 0.0
Identities = 793/793 (100%), Positives = 793/793 (100%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR
Sbjct: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
Query: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE
Sbjct: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
Query: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI
Sbjct: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
Query: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP
Sbjct: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
Query: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS
Sbjct: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
Query: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS
Sbjct: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
Query: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT
Sbjct: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
Query: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
Sbjct: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPV 720
LLVDGFSQPYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPV
Sbjct: 661 LLVDGFSQPYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPV 720
Query: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGRE 780
GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGRE
Sbjct: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGRE 780
Query: 781 VEENRPFQNNLGF 793
VEENRPFQNNLGF
Sbjct: 781 VEENRPFQNNLGF 793
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 1188 bits (3073), Expect = 0.0
Identities = 607/790 (76%), Positives = 667/790 (84%), Gaps = 2/790 (0%)
Query: 6 ERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTR 65
ER ++RQVL V LG++ A +P Y VAEETE G+F+ NL KDLGL +GEL RG R
Sbjct: 8 ERVPKQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGAR 67
Query: 66 IVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRD 125
+VS L TGDLLLNEKLDREELCGP EPCVLPFQ+LLE P Q F+AEL +RD
Sbjct: 68 VVSKGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRD 127
Query: 126 INDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDS 185
+NDH+PVFLD+EI LKI ES TPG FL+E AQD DVGTNSL NYTISPN +FH+N+ DS
Sbjct: 128 VNDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDS 187
Query: 186 GEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRS 245
+G I P+LVLN+ LDREE PE LTLTALDGGSPPRSGTALVRI V+D+NDN P+F +
Sbjct: 188 LDGIILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKL 247
Query: 246 LYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKA 305
LY+VQ+PE+SPVGS V VSARDLD G+NGEI+YAFS A+E I KTF+++ SG L L+
Sbjct: 248 LYEVQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQ 307
Query: 306 QLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVV 365
+LD+E+IQTYT+ IQA DGGGLSG C V V V D+NDN PEL +S+L + I EN +T++
Sbjct: 308 KLDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLI 367
Query: 366 AVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTD 425
AVF + D DSG+NG+ VCSIQDD+PF LKPSVENFYTLV LDRE +EYNITITVTD
Sbjct: 368 AVFSVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTD 427
Query: 426 LGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQ 485
GTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDSGTNAQ
Sbjct: 428 FGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 487
Query: 486 VIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEA 545
V YSLLP QDPHLPLASLVSINADNGHLFAL+SLDYEALQAFEFRVGA DRGSPALSSEA
Sbjct: 488 VTYSLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEA 547
Query: 546 LVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
LVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLSYQ
Sbjct: 548 LVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 607
Query: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDG 665
LLKATEPGLFGVWAHNGEVRTARLL ERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDG
Sbjct: 608 LLKATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDG 667
Query: 666 FSQPYLRLPEAAPDQANS--LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRC 723
FSQPYL LPEAAP QA + LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA VGRC
Sbjct: 668 FSQPYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 727
Query: 724 SVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGREVEE 783
SVPEGPFP +VD+SGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPN + Q R E
Sbjct: 728 SVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEA 787
Query: 784 NRPFQNNLGF 793
N F+ + F
Sbjct: 788 NPSFRKSFEF 797
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 1181 bits (3055), Expect = 0.0
Identities = 600/786 (76%), Positives = 673/786 (85%), Gaps = 2/786 (0%)
Query: 10 QKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSD 69
++RQVLFL +F G+S AG+ RY V EETE+G+F+ NLAKDLGL GEL ARGTR+VSD
Sbjct: 10 RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
Query: 70 QNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDH 129
N Q LLL S TG+LL NEKLDRE+LCGP+EPC+L FQ+L++ PFQI+RAEL VRDINDH
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
Query: 130 APVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGN 189
+PVF +E+ LKI E+T G AF LE AQD D G NS+ NYTIS N++FHI + S EG
Sbjct: 130 SPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGM 189
Query: 190 IYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKV 249
IYPELVL++ LDREE E SLTLTALDGGSP RSGT+ +RI+VLDVNDNAP F ++LY+
Sbjct: 190 IYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYET 249
Query: 250 QVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDY 309
Q PENSPVGS++V VSA D D+G N E++Y+F A+E IL TFQINP SG + L+ LDY
Sbjct: 250 QAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDY 309
Query: 310 EAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVVAVFR 369
E + +Y + IQA DGGGLS +CTV++ V D NDN PEL++SSL++ +AENSP V+AVF+
Sbjct: 310 ELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVFK 369
Query: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429
I+DRDSG NGKT+C +QD++PF LKPSV+NFY L+TE LDRE EYNITITVTDLGTP
Sbjct: 370 IKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTP 429
Query: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489
RLKTEH+IT+ VSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDSGTNAQV YS
Sbjct: 430 RLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549
LLP QDPHLPLASLVSINADNGHLFALRSLDYEALQAF+FRVGA+DRGSPALSSEALVRV
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRV 549
Query: 550 LVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
Query: 670 YLRLPEAAPDQANS--LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRCSVPE 727
YL LPEAAP QA + LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA VGRCSVPE
Sbjct: 670 YLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 729
Query: 728 GPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGREVEENRPF 787
GPFP HLVD+SGTGTL QSYQYEVCLTGGS T EFKFLKPI P+L P G+E+EEN
Sbjct: 730 GPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGGKEIEENSTL 789
Query: 788 QNNLGF 793
N+ GF
Sbjct: 790 PNSFGF 795
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 1179 bits (3049), Expect = 0.0
Identities = 600/788 (76%), Positives = 670/788 (85%), Gaps = 4/788 (0%)
Query: 10 QKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSD 69
++RQVLFL +F G+S AG+ RY V EETE+G+F+ NLAKDLGL GEL ARGTR+VSD
Sbjct: 10 RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
Query: 70 QNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDH 129
N Q LLL S TG+LL NEKLDRE+LCGP+EPC+L FQ+L++ PFQI+RAEL VRDINDH
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
Query: 130 APVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGN 189
APVF D+E LKI E+T G AF LE AQD D G N + NYTISPN++FHIN+ EG
Sbjct: 130 APVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGM 189
Query: 190 IYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKV 249
IYPELVL++ LDREE E SLTLTALDGGSP RSGT+ VRI+VLDVNDNAP F ++LY+
Sbjct: 190 IYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYET 249
Query: 250 QVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDY 309
Q PENSP+G ++V V A D+D+G N E++Y+F A+E I TFQINP SG + L+ LDY
Sbjct: 250 QAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDY 309
Query: 310 EAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVVAVFR 369
E + +Y + IQA DGGGLS +C V+V+V D NDN PEL++SS ++ +AENSPET +AVF+
Sbjct: 310 ELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFK 369
Query: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429
I DRDSG NGK VC IQ+++PF+LKPSVENFY L+TE LDRE EYNITITVTDLGTP
Sbjct: 370 INDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTP 429
Query: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489
RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDSGTNAQV YS
Sbjct: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549
LLP QDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALS EALVRV
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRV 549
Query: 550 LVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLH+LLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQP 669
Query: 670 YLRLPEAAPDQANS----LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRCSV 725
YL LPEAAP QA + LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA VGRCSV
Sbjct: 670 YLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSV 729
Query: 726 PEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGREVEENR 785
PEGPFP HLVD+ G TLSQSYQYEVCLTGG GT+EFKFLKP+I ++ Q GR+ EEN
Sbjct: 730 PEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENS 789
Query: 786 PFQNNLGF 793
F+N+ GF
Sbjct: 790 TFRNSFGF 797
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 1175 bits (3040), Expect = 0.0
Identities = 599/794 (75%), Positives = 677/794 (85%), Gaps = 2/794 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
ME R ++KRQVL V LG+S AG E Y VAEETE G+F+ NLA+DLGLGV EL
Sbjct: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
Query: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
+R R+VSD N + L L LTG+LLLNEKLDR+ELCG EPCVL FQ++LE P Q FR E
Sbjct: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
Query: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
L V+DINDH+P FLD+EI +KI E TT GA FL+ESAQD DVG+NSL NYTISPN++F+I
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
Query: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
+ DS + IYPELVL++ LD E+ E LTLTA+DGGSPP+SGT LV I VLD+NDNAP
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
Query: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
+F +SLY+VQVPE+ P+GS + ++SA+DLD G+ G+I+Y F +A+E I KTF+INP SG
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
Query: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
++L++ LD+E IQ+YT+ IQA DGGGLSGKCT++V V DINDN PE+ +SS+T I EN+
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
Query: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
ET+VA+F I D+DSG+NG+ +CSIQD++PF LKP+ +NF+TLV+EK LDRE EYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
ITVTDLGTPRLKTE+NITVL+SDVNDNAP FTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
GTNAQV YSLLP QD HLPLASLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
VGRCSVPEGPFP HLVD+SGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPN TG
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
Query: 779 REVEENRPFQNNLG 792
R + E F+N+ G
Sbjct: 781 RNMGEIENFRNSFG 794
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 1172 bits (3031), Expect = 0.0
Identities = 594/787 (75%), Positives = 676/787 (85%), Gaps = 2/787 (0%)
Query: 9 VQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVS 68
+Q RQVL V LGMS AG+E + V EE + G+F+ NLAK LGL V EL +RG R+VS
Sbjct: 9 LQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELSSRGARVVS 68
Query: 69 DQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDIND 128
+ N + L L + TGDLLL E LDREELCG EPCVL FQ+L++ P Q + EL VRDIND
Sbjct: 69 NDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIELQVRDIND 128
Query: 129 HAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEG 188
H+PVFL++E+ L+I E++ GA FLLESA+D DVG N++ +YTI+PN++FH+ + + +
Sbjct: 129 HSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHVKIRVNPDN 188
Query: 189 NIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYK 248
YPELVL++ LD EE PE S LTALDGGSPPRSGTALVR++V+D+NDN+P+F ++ Y+
Sbjct: 189 RKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYE 248
Query: 249 VQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLD 308
V++ ENS +GS+VV+VSA DLD+G+N E++Y FS+A+E I KTF+IN SG + L A LD
Sbjct: 249 VKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGDITLTAPLD 308
Query: 309 YEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVVAVF 368
+EAI++Y++ IQA DGGGL GK TV + V D+NDN PE+ +SS+TSPI EN+PETVV VF
Sbjct: 309 FEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENTPETVVMVF 368
Query: 369 RIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGT 428
RIRDRDSG+NGK VCSI +D+PF+LK SV N+YTL TE+PLDRE EYNITITVTDLGT
Sbjct: 369 RIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNITITVTDLGT 428
Query: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIY 488
PRLKTEHNITVLVSDVNDNAPAFTQTSY LFVRENNSPAL IGS+SATDRDSGTNAQV Y
Sbjct: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDSGTNAQVNY 488
Query: 489 SLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVR 548
SLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQ F+FRVGATD GSPALSSEALVR
Sbjct: 489 SLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPALSSEALVR 548
Query: 549 VLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
VLVLDANDNSPFVLYPLQN SAPCTE +P AAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
ATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
Query: 669 PYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRCSVP 726
PYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAAPVGRCSVP
Sbjct: 669 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAPVGRCSVP 728
Query: 727 EGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGREVEENRP 786
EGPFP HLVD+SGTGTLSQSY YEVC+TGGS +N+FKFLKPIIPN LPQSTG EVEEN P
Sbjct: 729 EGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTGSEVEENPP 788
Query: 787 FQNNLGF 793
FQNNLGF
Sbjct: 789 FQNNLGF 795
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 1161 bits (3004), Expect = 0.0
Identities = 597/795 (75%), Positives = 667/795 (83%), Gaps = 2/795 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
MEA ER +++RQVL L VFLG S AG+E RY VAEE E+G + NLAKDLGL V EL
Sbjct: 1 MEAGGERFLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELA 60
Query: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
ARG ++VS N Q LS TGDLLLNEKLDREELCGP EPC+L FQ+LL+ P Q E
Sbjct: 61 ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNE 120
Query: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
L + D+NDH+PVF + E+ LKILEST PG L +A+D DVG NSL NYTI+PN++FH+
Sbjct: 121 LRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHV 180
Query: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
+G YPELVL++ LDREE PE SLTLTALDGGSPPRSGTA + I VLD+NDNAP
Sbjct: 181 LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAP 240
Query: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
+F + LY+V V EN+PV S++V+VSA DLDTGS G I+YAF +A+E I KTFQ+NP +G
Sbjct: 241 EFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD 300
Query: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
+ L L++EAI +Y + I+AKDGGGLSGK TV+V V D+NDN PEL LSS+ SPI ENS
Sbjct: 301 MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS 360
Query: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
ETV+AVF + D DSG+NG+ +CSI++++PF LKPSVENFYTLV+E LDRE +EYNIT
Sbjct: 361 GETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNIT 420
Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
IT+TDLGTPRLKT++NITVLVSDVNDNAPAFTQ SYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
GTNAQV YSLLP QDPHLPL+SLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLRLPEAAPDQANS--LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
LLVDGFSQPYL LPEAAP QA + LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
VGRCSVPEGPFP +VD+SGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPN + Q
Sbjct: 721 SVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAE 780
Query: 779 REVEENRPFQNNLGF 793
R E N F+ + F
Sbjct: 781 RVSEANPSFRKSFEF 795
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 1161 bits (3003), Expect = 0.0
Identities = 590/792 (74%), Positives = 669/792 (84%), Gaps = 2/792 (0%)
Query: 4 RVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARG 63
++ R RQVL + + +S EP+RY V EETE G+F+ +LAKDLGLG+GEL +R
Sbjct: 3 KLGRIHPNRQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRS 62
Query: 64 TRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWV 123
R++SD + Q L L TGDLLL EKLDREELCGP EPCVL FQ+ LE P Q F+ EL +
Sbjct: 63 ARVLSDDDKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLI 122
Query: 124 RDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVH 183
+DINDH+P+F +RE+ LKILE++ PG F L A+D DVG+N L YTISPN++FHI
Sbjct: 123 QDINDHSPIFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTR 182
Query: 184 DSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFV 243
+ EG YP+LV ++ LDREE PEFSLTL ALDGGSPPRSGT +VRIL++D+NDNAP+FV
Sbjct: 183 NHSEGKKYPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFV 242
Query: 244 RSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHL 303
+ Y VQV ENSP+ S +V V ARD+D G+ G ++Y A++ I +TF IN +G + L
Sbjct: 243 HTPYGVQVLENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILL 302
Query: 304 KAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPET 363
K +LD+E I++Y + I+A DGGGLSGK TVV++V D+NDN PEL++SSLTS I EN+PET
Sbjct: 303 KKKLDFEKIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPET 362
Query: 364 VVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITV 423
VV++FRIRDRDSG NGK +CSI D++PFILKP+++NFYTLVTE+PLDRE + EYNITI V
Sbjct: 363 VVSIFRIRDRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAV 422
Query: 424 TDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTN 483
TDLGTPRLKT+ NITV VSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDSGTN
Sbjct: 423 TDLGTPRLKTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN 482
Query: 484 AQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSS 543
AQV YSLLP QDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGA+DRGSPALSS
Sbjct: 483 AQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSS 542
Query: 544 EALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLS 603
EALVRVLVLD NDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLS
Sbjct: 543 EALVRVLVLDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLS 602
Query: 604 YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLV 663
YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLV
Sbjct: 603 YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLV 662
Query: 664 DGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVG 721
DGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA VG
Sbjct: 663 DGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVG 722
Query: 722 RCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGREV 781
RCSVPEGPFP HLVD+SGTGTLSQSYQYEVCLTG SGT EFKFLKPI PNLL Q TGREV
Sbjct: 723 RCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREV 782
Query: 782 EENRPFQNNLGF 793
+EN F+N+L F
Sbjct: 783 KENPKFRNSLVF 794
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 1159 bits (2999), Expect = 0.0
Identities = 591/784 (75%), Positives = 666/784 (84%), Gaps = 2/784 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
ME ER ++RQVL L + L ++ AG EP RY V EETERG+F+ NLA DLGLGVGEL
Sbjct: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
Query: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
RG R+VS+ N Q L L TG L+LNEKLDRE+LCGP EPC++ FQ+LL+KP ++FRAE
Sbjct: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
Query: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
L V DINDH+P F +RE++LKI E+++ G F L+ A+D DVG+N++ NY ISPN++FH+
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
Query: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
+ G+G YPELVL+ LDREE E LTLTA+DGGSPPRSGT + ILVLD NDNAP
Sbjct: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
Query: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
+FV++LY+VQVPENSPVGS+VV VSARDLDTG+NGEI+Y+ Y+++ I K F+++ SG
Sbjct: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
Query: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
+ L +LD+E + +Y L I+A DGGGLSGKC+V V V D+NDN PEL +SSLTSPI ENS
Sbjct: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
Query: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
PET VA+FRIRDRDSG NGK +CSIQDDVPF LKPSVENFY LVTE LDRE EYNIT
Sbjct: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
IT+TDLGTPRLKTE +ITVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
GTNAQV YSLLP +DPHLPL SLVSIN DNGHLFAL+SLDYEALQAFEFRVGATDRG PA
Sbjct: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AK RLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
Query: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
VGRCSVPEGPFP HLVD+SGTGTLSQSYQYEVCLTGGS +N+FKFLKPI PN++ Q +
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
Query: 779 REVE 782
R+ E
Sbjct: 781 RKSE 784
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 1146 bits (2965), Expect = 0.0
Identities = 581/794 (73%), Positives = 663/794 (83%), Gaps = 3/794 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
ME + + QKRQV+FL + L + AG+E +RY + EETE G + NLAKDLGLGVGEL
Sbjct: 1 METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
Query: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
RG R+ N ++L L TG+LLL EKLDRE +CG EPC+L FQLLLE P Q F+ +
Sbjct: 61 TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
Query: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
L + DINDHAP F ++E+ LKI EST PG F L+ AQD D+G+N++ NYTISPN++FH+
Sbjct: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
Query: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
H+ G+G YPELVL++ LDREE PE SLTLTALDGG+PPRSGT +RI+VLD NDNAP
Sbjct: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
Query: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
+F++S Y+VQVPENSP+ S+VV VSARDLD G+ G +AYA + + + + F I+ +
Sbjct: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYAL-FQGDEVTQPFVIDEKTAE 299
Query: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
+ LK LD+EA Y + I A DGGGLSGKCTV ++V D+NDN PEL +S+L+SP EN+
Sbjct: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
Query: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
PETVVAVF + D DSG+NG+ +CSIQ+D+PF+LKP+++NFYTLVT++ LDRE EYNIT
Sbjct: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
ITVTD+GTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
Query: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
GTNAQV YSLLP Q+PHL LASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
Sbjct: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
Query: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
Query: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
VGRCSVPEGPFP HLVD+SGTGTLSQSY YEVCLTG SG EFKFLKPIIPNLLPQ G
Sbjct: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
Query: 779 REVEENRPFQNNLG 792
E+ + F+N+ G
Sbjct: 780 EEIGKTAAFRNSFG 793
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 1136 bits (2938), Expect = 0.0
Identities = 580/795 (72%), Positives = 668/795 (84%), Gaps = 2/795 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
ME + R Q RQVL L V LGMS AG+E + VAEE + G+F+ NLAKDLGL V EL
Sbjct: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
Query: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
+RG R+VS+ Q L L TGDLLL+E LDREELCG EPCVL Q+L++ P Q + E
Sbjct: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
Query: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
L VRDINDH+P+F ++++ L+I E++ GA FLLESA+D DVG N++ +YTISPN++FHI
Sbjct: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
Query: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
+ + YPELVL++ LD EE+PE S L+ALDGGSPPRSGTALVR++V+D+NDN+P
Sbjct: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
+F ++ Y+V++ ENS +GS+++ VSA DLD+G+NGEI Y FS+A+E I KTF+IN SG
Sbjct: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
Query: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
+ L+A LD+E I++Y++ IQA DGGGL GK TV++ V D+NDN PE+ +SS+TSPI EN+
Sbjct: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
Query: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
PETVV VF I+D DSG+NG+ VCSI +D+PF+LK SVEN+YTL TE+PLDRE EYNIT
Sbjct: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
ITVTDLG PRLKTEHN TVLVSDVNDNAP FTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
GTNAQV YSLLP QD HLPLASLVSIN DNGHLFALRSLDYEALQAF+FRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
VG CSVP+GPFP HLVD+SGTGTLSQSYQYEVCLTGGS TNEFKFLKP+IPN+ + G
Sbjct: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
Query: 779 REVEENRPFQNNLGF 793
+ EEN F+N+ GF
Sbjct: 781 KNSEENSTFRNSFGF 795
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 1135 bits (2936), Expect = 0.0
Identities = 572/767 (74%), Positives = 655/767 (85%), Gaps = 2/767 (0%)
Query: 10 QKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSD 69
++RQVL V L +S AGAE Y V EETERG+F+ NL KDLGLG+ E+ R RI+S
Sbjct: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
Query: 70 QNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDH 129
N Q L L + TGDLL+NEKLDREELCGP EPC+L FQ+L+E P +IF+AEL V DINDH
Sbjct: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
Query: 130 APVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGN 189
+P+F ++E+ LKI E++ G F L A D DVG+N++ NY ISP+++F + +H+ +G
Sbjct: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
Query: 190 IYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKV 249
YPELVL++ LDREE P+ LTLTALDGGSPPRSGTA VRI V+D+NDNAP+F + +YKV
Sbjct: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
Query: 250 QVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDY 309
Q+PENSP+GS+V +VSARDLD G+NG+I+Y +E I KT ++NP +G + L+ Q+D+
Sbjct: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Query: 310 EAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVVAVFR 369
E + +Y + I+A DGGGLSGKCT+++ V D+NDN P++ +S+LTSPI ENSPE VVAVF
Sbjct: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369
Query: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429
+ D DSGNNGKT+ SIQ+D+PF+LKPSV+NFYTLVTE+ LDRE EYNIT+TVTD+GTP
Sbjct: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
Query: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489
RLKTEHNITV +SDVNDNAP FTQTSYTLFVRENNSPAL IGSVSATDRDSGTNAQV YS
Sbjct: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549
LLP QDPHLPLASLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPALSSEALVRV
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
Query: 550 LVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
Query: 670 YLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRCSVPE 727
+L LPEAAP QANSLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA VGRCS+PE
Sbjct: 670 FLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPE 729
Query: 728 GPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLP 774
GPFP LVD+SGTGTLSQSYQYEVCLTGGS T+EFKFLKPIIPN P
Sbjct: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 1126 bits (2912), Expect = 0.0
Identities = 575/796 (72%), Positives = 658/796 (82%), Gaps = 3/796 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGA-EPLRYFVAEETERGTFLTNLAKDLGLGVGEL 59
MEA + ++RQVLF + LG+S AGA EP Y V EETE +F+TNLAKDLGL E
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 RARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRA 119
RG R+VS N L L+ T DLLLNEKLDRE+LCG EPCVL FQ+LLE PF+ F+A
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFH 179
EL V DINDH+PVFLD+++ +K+ ES+ PG AF L++A+D D+G N++ NY ISPN+YF
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
Query: 180 INVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNA 239
+ +G YPELVL+ LDREE E LTLTALDGGSPPRSGTA V I V+DVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
Query: 240 PDFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSG 299
P+F + Y+VQ+ E+SP+ +VV VSA D+DTG NGEI+Y+ A++ I KTF+++ +G
Sbjct: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
Query: 300 SLHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAEN 359
+ LK QLD+E Q+Y + I+A+D GG SGKCTV++ V D+ND+ PE+ +S+ TSPI EN
Sbjct: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 SPETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNI 419
+PETVVA+F + D DSG NGK CSIQ+D+PF+LK SV NFYTL+TE PLDRE EYN+
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
Query: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRD 479
TITVTDLGTPRL T N+TVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRD
Sbjct: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
Query: 480 SGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539
SGTNAQV YSLLP QDPHLPLASLVSIN DNGHLFALRSLDYEALQAFEFRVGA+DRGSP
Sbjct: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLH 659
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPP SATATLH
Sbjct: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
Query: 660 VLLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 717
+LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAV LCRRSRA
Sbjct: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
Query: 718 APVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQST 777
A VGRCSVPEGPFP HLVD+ GTG+LSQ+YQYEVCL GGSGTNEF+FLKP++PN+ S
Sbjct: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
Query: 778 GREVEENRPFQNNLGF 793
G E+E+N F+N GF
Sbjct: 781 GPEMEQNSNFRNGFGF 796
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 1123 bits (2905), Expect = 0.0
Identities = 578/796 (72%), Positives = 655/796 (82%), Gaps = 4/796 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGA-EPLRYFVAEETERGTFLTNLAKDLGLGVGEL 59
MEA + ++RQVLF + LG+S AGA EP Y V EETE +F+TNLAKDLGL E
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 RARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRA 119
RG R+VS N L L+ T DLLLNEKLDRE+LCG EPCVL FQ+LLE PF+ F+A
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFH 179
EL V DINDH+PVFLD+++ +K+ ES+ PG F L++A+D DVG N++ NY ISPN+YF
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
Query: 180 INVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNA 239
+ +G YPELVL++ LDREE E LTLTALDGGSPPRSGTA V I VLDVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
Query: 240 PDFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSG 299
P+F + Y+VQ+ E+SPVG +VV VSA D+DTG NGEI+Y+ A+E I KTF+INP +G
Sbjct: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
Query: 300 SLHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAEN 359
+ LK QLD+E +Q+Y + I+A+D G SGKCTV++ V D+ND+ PE+ +S+ TSPI EN
Sbjct: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 SPETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNI 419
+PETVVA+F + D DSG NGK CSIQ+D+PF+LK S ENFYTL+TE+PLDRE EYNI
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNI 419
Query: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRD 479
TITVTDLGTP L T+ N+TVL++DVNDNAPAFTQTSYTLFVRENNSPAL I SVSATDRD
Sbjct: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
Query: 480 SGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539
SGTNAQV YSLLP QDPHLPL SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRV+VLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLH 659
AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 660 VLLVDGFSQPYLRLPEAAPDQANS--LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 717
VLLVDGFSQPYL LPEAAP QA + LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 718 APVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQST 777
A VGRC VPEGP P HLVD+SGT TLSQSYQYEVCL GGSGTNEFKFLKPIIPN PQ
Sbjct: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
Query: 778 GREVEENRPFQNNLGF 793
G+E++ N F NN GF
Sbjct: 780 GKEIQGNSTFPNNFGF 795
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 1102 bits (2850), Expect = 0.0
Identities = 568/795 (71%), Positives = 647/795 (81%), Gaps = 5/795 (0%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
M+ +V+ +KRQV F + + G+E ++Y V EETE GTF+ NL KDLGL VGEL
Sbjct: 2 MQTKVQN--KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELA 59
Query: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
+RG R+V N Q L T DLLLNEKLDREELCG EPCVLPFQ+LLE P Q F+A
Sbjct: 60 SRGARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQAS 119
Query: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
L VRDINDHAP F RE+ LKI E T PG F L+ A D D G+N L YTIS N +FH+
Sbjct: 120 LRVRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHV 179
Query: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
+ EG +PELVL++ LDREE P+ LTL ALDGGSPPRSGT+ ++I VLD+NDN P
Sbjct: 180 LTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVP 239
Query: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
+F + LY+ QVPEN+P+GS+V++VSARDLD GS G+++YA + + + + F+IN +G
Sbjct: 240 EFAQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYAL-FQVDDVNQPFEINAITGE 298
Query: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
+ L+ LD+E IQ+Y + ++A DGGGLSGKC++VV V D+NDN PEL +S S I EN
Sbjct: 299 IRLRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENL 358
Query: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
PE VAVF + D DSG+N + +CSI++++PF+L+PSVENFYTLVTE LDRE EYNIT
Sbjct: 359 PEITVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNIT 418
Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
ITVTDLGTPRLKT+ +ITV VSDVNDN PAFTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 419 ITVTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 478
Query: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
G NAQV YSLLP QDPHLPL+SLVSINADNGHLFALRSLDYEALQ+FEFRVGATDRGSPA
Sbjct: 479 GINAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPA 538
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVR+LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 539 LSSEALVRLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 598
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 599 WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 658
Query: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 659 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 718
Query: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
VGR SVPEGPFP HLVD+SGTGTLSQSYQY+VCLTGGS TNEFKFLKPI+PN PQ T
Sbjct: 719 SVGRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTE 778
Query: 779 REVEENRPFQNNLGF 793
RE+EE +N+ F
Sbjct: 779 REMEETPTSRNSFPF 793
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 787 bits (2033), Expect = 0.0
Identities = 413/779 (53%), Positives = 547/779 (70%), Gaps = 7/779 (0%)
Query: 7 RAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRI 66
+++Q RQV L +FL +S A +RY VAEE E G+F+ N+AKDLGL VG+L ARG R+
Sbjct: 7 KSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARL 66
Query: 67 VSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDI 126
VS+ N L TGDL + EKLDRE LCG +PCVL F+++L +P Q FRAE+ V DI
Sbjct: 67 VSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDI 126
Query: 127 NDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSG 186
ND+APVFL++E LKI EST G+ F L+SAQD DVG N L NYT+S N YFH++
Sbjct: 127 NDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCS 186
Query: 187 EGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSL 246
G Y ELVLN+ LDREE PE +LT+TA+DGGSPP+SGTA + ++VLDVND+ P F R +
Sbjct: 187 HGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLV 246
Query: 247 YKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQ 306
Y+ QV ENSP GS+V +V+A DLD G+N I Y+ + E ILKTFQI+P +G + L+
Sbjct: 247 YRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGP 306
Query: 307 LDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS-PETVV 365
LD+EAI+TY + IQA DGGGLS V+V+V D+NDN PE+++SS++SP+ E+S P+TVV
Sbjct: 307 LDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVV 366
Query: 366 AVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTD 425
A+F IRDRD GK C +++D+PF++KP+ N Y+LVT++ LDRE + YNITI D
Sbjct: 367 ALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMD 426
Query: 426 LGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQ 485
G P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ
Sbjct: 427 TGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQ 486
Query: 486 VIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEA 545
+ YSLLP ++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G +LSS+
Sbjct: 487 ITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQV 546
Query: 546 LVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
VRV+VLD NDN P +LYPLQN + PC + +PR+AE GYLVTKVVAVDGDSGQN+WLSY
Sbjct: 547 TVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYH 606
Query: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDG 665
LLKAT+ GLF V NGE+ T R +SERD Q+L++LV+D+G+P S T +L++LLVDG
Sbjct: 607 LLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDG 666
Query: 666 FSQPYLRL--PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR---AAPV 720
FS+PYL+ P + N T YLV++L +S LFLLSV++ + + ++ + +
Sbjct: 667 FSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTI 726
Query: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNL-LPQSTG 778
+ F +LV G G+LS+ YE+C G+G +EF+FLK +PN P +TG
Sbjct: 727 QEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATG 785
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 647 bits (1668), Expect = 0.0
Identities = 366/787 (46%), Positives = 491/787 (62%), Gaps = 21/787 (2%)
Query: 13 QVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQN 71
+++ LC LGM W A A +RY V EETE+G + N++KDL L EL R RIVS
Sbjct: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
Query: 72 MQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAP 131
Q+ L+ +G L+ ++DREELC C++ F++L+E +++ E+ V DIND AP
Sbjct: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
Query: 132 VFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIY 191
F + +KI E PGA + L A D DVG NSL +Y +SPN +F +NV G I
Sbjct: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
Query: 192 PELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQV 251
PELVL + LDREE L LTA DGG P RS T + + VLD NDNAP F + +Y+V+V
Sbjct: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
Query: 252 PENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEA 311
EN P G+ +++ +A DLD G NG++AY F E+ FQ+N +G + LDYE
Sbjct: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
Query: 312 IQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPE-TVVAVFRI 370
Y + IQA+DGGGL G V++ V D+NDNRPE+ ++SL SP+ E++P+ TV+ +F
Sbjct: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Query: 371 RDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPR 430
DRDSG NG+ VCSIQ+++ F L+ S E++Y L+T + LDRE+ +EYNIT+T TD GTP
Sbjct: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
Query: 431 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSL 490
L TE +IT+ V+D+NDN PAF+Q SY++++ ENN+ I SV A D DS N++VIYSL
Sbjct: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
Query: 491 LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 550
PL++ VSIN+D G L+AL S DYE + + +V A+D GSP LSS +R+
Sbjct: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
Query: 551 VLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
VLD NDN+P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY+L KA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ- 668
+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
Query: 669 ----PYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRL-----CRRSRAAP 719
L++P A +A+ LT+YLVVA+A VS +FL V+ +A+RL RA
Sbjct: 672 LADLGSLQIP--ADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATS 729
Query: 720 VGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGR 779
G VP H V + G Q+Y E LT S + F +P + L + +
Sbjct: 730 DGLAGVPTS----HFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTL--ISQQ 783
Query: 780 EVEENRP 786
E+N P
Sbjct: 784 SCEKNEP 790
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 647 bits (1668), Expect = 0.0
Identities = 366/787 (46%), Positives = 491/787 (62%), Gaps = 21/787 (2%)
Query: 13 QVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQN 71
+++ LC LGM W A A +RY V EETE+G + N++KDL L EL R RIVS
Sbjct: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
Query: 72 MQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAP 131
Q+ L+ +G L+ ++DREELC C++ F++L+E +++ E+ V DIND AP
Sbjct: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
Query: 132 VFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIY 191
F + +KI E PGA + L A D DVG NSL +Y +SPN +F +NV G I
Sbjct: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
Query: 192 PELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQV 251
PELVL + LDREE L LTA DGG P RS T + + VLD NDNAP F + +Y+V+V
Sbjct: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
Query: 252 PENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEA 311
EN P G+ +++ +A DLD G NG++AY F E+ FQ+N +G + LDYE
Sbjct: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
Query: 312 IQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPE-TVVAVFRI 370
Y + IQA+DGGGL G V++ V D+NDNRPE+ ++SL SP+ E++P+ TV+ +F
Sbjct: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Query: 371 RDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPR 430
DRDSG NG+ VCSIQ+++ F L+ S E++Y L+T + LDRE+ +EYNIT+T TD GTP
Sbjct: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
Query: 431 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSL 490
L TE +IT+ V+D+NDN PAF+Q SY++++ ENN+ I SV A D DS N++VIYSL
Sbjct: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
Query: 491 LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 550
PL++ VSIN+D G L+AL S DYE + + +V A+D GSP LSS +R+
Sbjct: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
Query: 551 VLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
VLD NDN+P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY+L KA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ- 668
+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
Query: 669 ----PYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRL-----CRRSRAAP 719
L++P A +A+ LT+YLVVA+A VS +FL V+ +A+RL RA
Sbjct: 672 LADLGSLQIP--ADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATS 729
Query: 720 VGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGR 779
G VP H V + G Q+Y E LT S + F +P + L + +
Sbjct: 730 DGLAGVPTS----HFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTL--ISQQ 783
Query: 780 EVEENRP 786
E+N P
Sbjct: 784 SCEKNEP 790
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 642 bits (1655), Expect = 0.0
Identities = 356/762 (46%), Positives = 472/762 (61%), Gaps = 9/762 (1%)
Query: 14 VLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQNM 72
++ LC+F G+ W AGA + Y + EE E+G+F+ N++KDLGL EL RG RIVS
Sbjct: 17 LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
Query: 73 QILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAPV 132
Q+ L+ +G L+ ++DREELC CV+ F +L+E ++F E+ V DIND+AP
Sbjct: 77 QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
Query: 133 FLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIYP 192
F + +KI E+ G F L A D DVG NSL +Y +SPN +F + V G YP
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
Query: 193 ELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQVP 252
ELVL LDREE L LTA DGG P RSGT LV + V D NDNAP F Y+V VP
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
Query: 253 ENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEAI 312
EN PVG+ +++V+A D D G+NGE+ Y+F + L FQ+N +G + + LDYE
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
Query: 313 QTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSP-ETVVAVFRIR 371
Y + IQA+DGG V++ V D+NDN PEL ++SL SP+ E+SP TVVA+ +
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
Query: 372 DRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPRL 431
D DS NG+ CSI +PF L+ S++++Y LV + LDRE+ + YNIT+T TD G+P L
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
Query: 432 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSLL 491
TE + + V+D+NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+IYSL
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
Query: 492 PSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLV 551
+PL+S +SIN+D G L+ALRS DYE + +V A+D G P LSS + + V
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
Query: 552 LDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
LD NDN+P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
Query: 611 EPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 670
EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D Q
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
Query: 671 LRL---PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAAPVGRCSV 725
L A + + LT+YLVVA+A+VS +FL V++ +A RL R +SR +
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
Query: 726 PEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767
G H V + G Q+Y +EV LT S + F +P
Sbjct: 737 -TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 642 bits (1655), Expect = 0.0
Identities = 356/762 (46%), Positives = 472/762 (61%), Gaps = 9/762 (1%)
Query: 14 VLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQNM 72
++ LC+F G+ W AGA + Y + EE E+G+F+ N++KDLGL EL RG RIVS
Sbjct: 17 LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
Query: 73 QILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAPV 132
Q+ L+ +G L+ ++DREELC CV+ F +L+E ++F E+ V DIND+AP
Sbjct: 77 QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
Query: 133 FLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIYP 192
F + +KI E+ G F L A D DVG NSL +Y +SPN +F + V G YP
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
Query: 193 ELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQVP 252
ELVL LDREE L LTA DGG P RSGT LV + V D NDNAP F Y+V VP
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
Query: 253 ENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEAI 312
EN PVG+ +++V+A D D G+NGE+ Y+F + L FQ+N +G + + LDYE
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
Query: 313 QTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSP-ETVVAVFRIR 371
Y + IQA+DGG V++ V D+NDN PEL ++SL SP+ E+SP TVVA+ +
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
Query: 372 DRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPRL 431
D DS NG+ CSI +PF L+ S++++Y LV + LDRE+ + YNIT+T TD G+P L
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
Query: 432 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSLL 491
TE + + V+D+NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+IYSL
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
Query: 492 PSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLV 551
+PL+S +SIN+D G L+ALRS DYE + +V A+D G P LSS + + V
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
Query: 552 LDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
LD NDN+P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
Query: 611 EPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 670
EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D Q
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
Query: 671 LRL---PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAAPVGRCSV 725
L A + + LT+YLVVA+A+VS +FL V++ +A RL R +SR +
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
Query: 726 PEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767
G H V + G Q+Y +EV LT S + F +P
Sbjct: 737 -TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 639 bits (1647), Expect = 0.0
Identities = 357/773 (46%), Positives = 485/773 (62%), Gaps = 15/773 (1%)
Query: 12 RQVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQ 70
R L + LG W A A + Y V+EET++G+F+ ++AKDLGL EL RG RI+S
Sbjct: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
Query: 71 NMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHA 130
Q+ L+ +G L+ ++DREE+C C++ F +L+E ++ ++ + DIND+
Sbjct: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
Query: 131 PVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNI 190
P FL EI++KI+E+T PG F L A D DVGTNSL +Y +SPN +F + V +
Sbjct: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
Query: 191 YPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQ 250
YPELVL +VLDREE L LTA DGG PPRS TA +++ V+DVND+ P F Y+V
Sbjct: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
Query: 251 VPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYE 310
VPEN PVG+ +++V A DLD G NGE+ Y+F T ++ K F +N +G + LDYE
Sbjct: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
Query: 311 AIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSP-ETVVAVFR 369
Y + +QA+DG G K V++ V D+NDN PE+ ++SL+S I E++P TV+A+F
Sbjct: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
Query: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429
++DRDSG NG+ C+I +++PF L+ S++N+Y LVT K LDRE + YNIT+ TD GTP
Sbjct: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
Query: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489
L E +I + V+D NDN P F +SY++++ ENN I V+A D DS NAQ+ YS
Sbjct: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
Query: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549
L P++S VSIN+D G L+AL+S DYE L+ + RV A D G P LSS + +
Sbjct: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
Query: 550 LVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
VLD NDN P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
A+EPGLF V + GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D +
Sbjct: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
Query: 669 PYLRLPEAAPDQA---NSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AAPV 720
L P LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A+
Sbjct: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
Query: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLL 773
G +VP H V + G Q+Y +EV LT S + F +P ++L
Sbjct: 731 GLANVPTS----HFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDML 779
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 639 bits (1647), Expect = 0.0
Identities = 357/773 (46%), Positives = 485/773 (62%), Gaps = 15/773 (1%)
Query: 12 RQVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQ 70
R L + LG W A A + Y V+EET++G+F+ ++AKDLGL EL RG RI+S
Sbjct: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
Query: 71 NMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHA 130
Q+ L+ +G L+ ++DREE+C C++ F +L+E ++ ++ + DIND+
Sbjct: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
Query: 131 PVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNI 190
P FL EI++KI+E+T PG F L A D DVGTNSL +Y +SPN +F + V +
Sbjct: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
Query: 191 YPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQ 250
YPELVL +VLDREE L LTA DGG PPRS TA +++ V+DVND+ P F Y+V
Sbjct: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
Query: 251 VPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYE 310
VPEN PVG+ +++V A DLD G NGE+ Y+F T ++ K F +N +G + LDYE
Sbjct: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
Query: 311 AIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSP-ETVVAVFR 369
Y + +QA+DG G K V++ V D+NDN PE+ ++SL+S I E++P TV+A+F
Sbjct: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
Query: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429
++DRDSG NG+ C+I +++PF L+ S++N+Y LVT K LDRE + YNIT+ TD GTP
Sbjct: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
Query: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489
L E +I + V+D NDN P F +SY++++ ENN I V+A D DS NAQ+ YS
Sbjct: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
Query: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549
L P++S VSIN+D G L+AL+S DYE L+ + RV A D G P LSS + +
Sbjct: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
Query: 550 LVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
VLD NDN P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
A+EPGLF V + GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D +
Sbjct: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
Query: 669 PYLRLPEAAPDQA---NSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AAPV 720
L P LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A+
Sbjct: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
Query: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLL 773
G +VP H V + G Q+Y +EV LT S + F +P ++L
Sbjct: 731 GLANVPTS----HFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDML 779
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 634 bits (1636), Expect = 0.0
Identities = 363/790 (45%), Positives = 486/790 (61%), Gaps = 17/790 (2%)
Query: 6 ERAVQKRQVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGT 64
+R Q+ + + L LG W A A +RY + EE E+G+F+ N+ KDLGL EL G
Sbjct: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
Query: 65 RIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVR 124
RIVS MQ+ L+ G L+ ++DREELC C++ F +L+E ++ E+ +
Sbjct: 65 RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
Query: 125 DINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHD 184
DIND+ P FL E+ +KILE+ P + F L D DVG NSL + +S N++F ++V
Sbjct: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
Query: 185 SGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVR 244
G YPELVL LDRE + L LTA+DGG P RS A + + VLDVNDN P F +
Sbjct: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
Query: 245 SLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLK 304
+Y+V VPEN PVG+ V++V+A D D G +GE+ Y+F TE+I + F +N +G +
Sbjct: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
Query: 305 AQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPE-T 363
A LDYE Y L ++A+DG GL + V++ + D+NDN PE++++S + IAE++P T
Sbjct: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
Query: 364 VVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITV 423
V+A+F++ DRDSG NG CSI +PF L+ SV N+Y LVT LDRE YNIT+T
Sbjct: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
Query: 424 TDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTN 483
TD GTP L TE I++ V+D NDN P F +SY+++V ENN I SV+A D D N
Sbjct: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
Query: 484 AQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSS 543
AQV YSL PL+S VSIN+D G L+ALRS DYE L+ + V A+D G P LSS
Sbjct: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
Query: 544 EALVRVLVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWL 602
+ + VLD NDN+P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWL
Sbjct: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 603 SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLL 662
SY+LLKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V +
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
Query: 663 VDGFSQPYLRL----PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR 716
D L P A P+ ++ LT+YLVVA+A+VS +FL V++ +A+RL R +SR
Sbjct: 665 ADRIPDILADLGSLEPSAKPNDSD-LTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSR 723
Query: 717 ---AAPVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLL 773
A+ G S+P H V + G Q+Y +EV LT S + F +P + L
Sbjct: 724 LLQASGGGLASMPGS----HFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL 779
Query: 774 PQSTGREVEE 783
E E
Sbjct: 780 INQESYEKSE 789
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 634 bits (1636), Expect = 0.0
Identities = 363/790 (45%), Positives = 486/790 (61%), Gaps = 17/790 (2%)
Query: 6 ERAVQKRQVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGT 64
+R Q+ + + L LG W A A +RY + EE E+G+F+ N+ KDLGL EL G
Sbjct: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
Query: 65 RIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVR 124
RIVS MQ+ L+ G L+ ++DREELC C++ F +L+E ++ E+ +
Sbjct: 65 RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
Query: 125 DINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHD 184
DIND+ P FL E+ +KILE+ P + F L D DVG NSL + +S N++F ++V
Sbjct: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
Query: 185 SGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVR 244
G YPELVL LDRE + L LTA+DGG P RS A + + VLDVNDN P F +
Sbjct: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
Query: 245 SLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLK 304
+Y+V VPEN PVG+ V++V+A D D G +GE+ Y+F TE+I + F +N +G +
Sbjct: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
Query: 305 AQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPE-T 363
A LDYE Y L ++A+DG GL + V++ + D+NDN PE++++S + IAE++P T
Sbjct: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
Query: 364 VVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITV 423
V+A+F++ DRDSG NG CSI +PF L+ SV N+Y LVT LDRE YNIT+T
Sbjct: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
Query: 424 TDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTN 483
TD GTP L TE I++ V+D NDN P F +SY+++V ENN I SV+A D D N
Sbjct: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
Query: 484 AQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSS 543
AQV YSL PL+S VSIN+D G L+ALRS DYE L+ + V A+D G P LSS
Sbjct: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
Query: 544 EALVRVLVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWL 602
+ + VLD NDN+P +LYP L + E PR+AEPGYLVTKVVAVD DSGQNAWL
Sbjct: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 603 SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLL 662
SY+LLKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V +
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
Query: 663 VDGFSQPYLRL----PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR 716
D L P A P+ ++ LT+YLVVA+A+VS +FL V++ +A+RL R +SR
Sbjct: 665 ADRIPDILADLGSLEPSAKPNDSD-LTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSR 723
Query: 717 ---AAPVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLL 773
A+ G S+P H V + G Q+Y +EV LT S + F +P + L
Sbjct: 724 LLQASGGGLASMPGS----HFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL 779
Query: 774 PQSTGREVEE 783
E E
Sbjct: 780 INQESYEKSE 789
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 632 bits (1630), Expect = 0.0
Identities = 359/783 (45%), Positives = 491/783 (62%), Gaps = 16/783 (2%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEP--LRYFVAEETERGTFLTNLAKDLGLGVGE 58
M+A R R + L FL + GA P +RY + EE + + + NLAKDLGL V +
Sbjct: 1 MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRD 60
Query: 59 LRARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFR 118
L AR R+ +++ + ++ +GDLL+++++DRE++CG + CVL F + E P IF
Sbjct: 61 LPARKLRVSAEK--EYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFY 118
Query: 119 AELWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYF 178
+ V+DIND+ P+F +I+LKI EST PG F L+ A DSDVG NSL Y ++ N YF
Sbjct: 119 IAVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYF 178
Query: 179 HINVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDN 238
+ + +G YPEL+L LDREE L LTA+DGG PP+SGT +RI V D NDN
Sbjct: 179 DLAEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDN 238
Query: 239 APDFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTS 298
P F + +Y+V + E+ P G V+ V+A D D G N EI Y+F E++ F +N +
Sbjct: 239 PPVFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKT 298
Query: 299 GSLHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAE 358
G + K LD+E +YTL+I+AKD G L+ C++ V++ D ND PE++++S+++P+ E
Sbjct: 299 GEITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPE 358
Query: 359 NSPE-TVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEY 417
+SP TV+A+ + RDRDSG NG+ C + + FILK S +N+Y LVT+ LDRE EY
Sbjct: 359 DSPPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEY 418
Query: 418 NITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATD 477
N+TIT TD G P L + +T+ +SDVNDNAP F QTSY + V ENN P I +SA+D
Sbjct: 419 NLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASD 478
Query: 478 RDSGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRG 537
D G + QV YS++ S + S VS++A +G +FA R+ D+E L+AFE + A D+G
Sbjct: 479 PDLGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQG 538
Query: 538 SPALSSEALVRVLVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDS 596
SPALS+ +RVLV D NDN+P VLYP L + + +PRAAEPGYLVTKVVAVD DS
Sbjct: 539 SPALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADS 598
Query: 597 GQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATA 656
G NAWLSY +L+A+EPGLF + GEVRTAR L +RDAA+QRL+V V+D G+PP SATA
Sbjct: 599 GHNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATA 658
Query: 657 TLHVLLVDGFSQ--PYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRR 714
TLH++ D + P L D L YLVVALA +S LF L+V+L +++RL R
Sbjct: 659 TLHLIFADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRL-RL 717
Query: 715 SRAAPVGRCSVP---EGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPN 771
S + C P P P L + S GTL Y Y +C+ S EF FL I P
Sbjct: 718 SSRSDAWDCFQPGLSSKPGPGVLPNYS-EGTL--PYSYNLCVASQSAKTEFNFLN-ITPE 773
Query: 772 LLP 774
L+P
Sbjct: 774 LVP 776
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 632 bits (1630), Expect = 0.0
Identities = 355/755 (47%), Positives = 476/755 (63%), Gaps = 22/755 (2%)
Query: 27 GAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQNMQILLLSSLTGDLLL 86
G+ +RY + EE ++G+F+ N+AKDLGL EL RG RIVS Q+ L+ +G L+
Sbjct: 27 GSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQLFALNPRSGSLVT 86
Query: 87 NEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAPVFLDREISLKILEST 146
++DREELC CV+ F +L+E +I+ E+ + DIND+ P F D E+ +K+ E+
Sbjct: 87 AGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRFRDEELKVKVNENA 146
Query: 147 TPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIYPELVLNQVLDREEIP 206
G +L A+D+DVG NSL +Y +S N +F ++V +G YPELVL Q LDRE+
Sbjct: 147 AAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKET 206
Query: 207 EFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQVPENSPVGSMVVSVSA 266
L LTALDGG P SGT +R+ VLD NDNAP F S Y V VPEN PVG+ ++ ++A
Sbjct: 207 VHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTA 266
Query: 267 RDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEAIQTYTLTIQAKDGGG 326
D D G NG++ Y+F E+I +TFQ++ G + LDYE + Y + + A+DGG
Sbjct: 267 TDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA 326
Query: 327 LSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS-PETVVAVFRIRDRDSGNNGKTVCSI 385
L VVV V D+NDN PE++L+SLTS I+E+ P TV+A+F + D DSG NG+ CSI
Sbjct: 327 LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSI 386
Query: 386 QDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVN 445
++PF L+ SV+N+Y L+T + LDRE ++YNIT+TV D GTP L TE +I + V+DVN
Sbjct: 387 PRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVN 446
Query: 446 DNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSLLPSQDPHLPLASLVS 505
DN P F Q SY+ V ENN + I SV+A D DSG NA+V YSL PL+S VS
Sbjct: 447 DNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVS 506
Query: 506 INADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYP- 564
IN+D G L+ALRS DYE L+ + V A+D G+P LSS + + VLD NDN+P +LYP
Sbjct: 507 INSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA 566
Query: 565 LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV 624
L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V H GEV
Sbjct: 567 LPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEV 626
Query: 625 RTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLRLPEAAPDQAN-- 682
RTAR L +RDA KQ LVV V+D+G+PP SAT T+ V + D R+P+ D +
Sbjct: 627 RTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVAD-------RIPDILADLGSIK 679
Query: 683 --------SLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAAPVGRCSVPEGPFPR 732
LT+YLVVA+A+VS +FL V++ + +RL R +SR + P
Sbjct: 680 TPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLAGVP-AS 738
Query: 733 HLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767
H V + G Q+Y +EV LT S + F +P
Sbjct: 739 HFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 632 bits (1630), Expect = 0.0
Identities = 355/755 (47%), Positives = 476/755 (63%), Gaps = 22/755 (2%)
Query: 27 GAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQNMQILLLSSLTGDLLL 86
G+ +RY + EE ++G+F+ N+AKDLGL EL RG RIVS Q+ L+ +G L+
Sbjct: 27 GSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQLFALNPRSGSLVT 86
Query: 87 NEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAPVFLDREISLKILEST 146
++DREELC CV+ F +L+E +I+ E+ + DIND+ P F D E+ +K+ E+
Sbjct: 87 AGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRFRDEELKVKVNENA 146
Query: 147 TPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIYPELVLNQVLDREEIP 206
G +L A+D+DVG NSL +Y +S N +F ++V +G YPELVL Q LDRE+
Sbjct: 147 AAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKET 206
Query: 207 EFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQVPENSPVGSMVVSVSA 266
L LTALDGG P SGT +R+ VLD NDNAP F S Y V VPEN PVG+ ++ ++A
Sbjct: 207 VHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTA 266
Query: 267 RDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEAIQTYTLTIQAKDGGG 326
D D G NG++ Y+F E+I +TFQ++ G + LDYE + Y + + A+DGG
Sbjct: 267 TDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA 326
Query: 327 LSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS-PETVVAVFRIRDRDSGNNGKTVCSI 385
L VVV V D+NDN PE++L+SLTS I+E+ P TV+A+F + D DSG NG+ CSI
Sbjct: 327 LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSI 386
Query: 386 QDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVN 445
++PF L+ SV+N+Y L+T + LDRE ++YNIT+TV D GTP L TE +I + V+DVN
Sbjct: 387 PRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVN 446
Query: 446 DNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSLLPSQDPHLPLASLVS 505
DN P F Q SY+ V ENN + I SV+A D DSG NA+V YSL PL+S VS
Sbjct: 447 DNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVS 506
Query: 506 INADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYP- 564
IN+D G L+ALRS DYE L+ + V A+D G+P LSS + + VLD NDN+P +LYP
Sbjct: 507 INSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA 566
Query: 565 LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV 624
L + E PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V H GEV
Sbjct: 567 LPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEV 626
Query: 625 RTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLRLPEAAPDQAN-- 682
RTAR L +RDA KQ LVV V+D+G+PP SAT T+ V + D R+P+ D +
Sbjct: 627 RTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVAD-------RIPDILADLGSIK 679
Query: 683 --------SLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAAPVGRCSVPEGPFPR 732
LT+YLVVA+A+VS +FL V++ + +RL R +SR + P
Sbjct: 680 TPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLAGVP-AS 738
Query: 733 HLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767
H V + G Q+Y +EV LT S + F +P
Sbjct: 739 HFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
[Homo sapiens]
Length = 811
Score = 632 bits (1630), Expect = 0.0
Identities = 359/783 (45%), Positives = 491/783 (62%), Gaps = 16/783 (2%)
Query: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEP--LRYFVAEETERGTFLTNLAKDLGLGVGE 58
M+A R R + L FL + GA P +RY + EE + + + NLAKDLGL V +
Sbjct: 1 MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRD 60
Query: 59 LRARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFR 118
L AR R+ +++ + ++ +GDLL+++++DRE++CG + CVL F + E P IF
Sbjct: 61 LPARKLRVSAEK--EYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFY 118
Query: 119 AELWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYF 178
+ V+DIND+ P+F +I+LKI EST PG F L+ A DSDVG NSL Y ++ N YF
Sbjct: 119 IAVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYF 178
Query: 179 HINVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDN 238
+ + +G YPEL+L LDREE L LTA+DGG PP+SGT +RI V D NDN
Sbjct: 179 DLAEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDN 238
Query: 239 APDFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTS 298
P F + +Y+V + E+ P G V+ V+A D D G N EI Y+F E++ F +N +
Sbjct: 239 PPVFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKT 298
Query: 299 GSLHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAE 358
G + K LD+E +YTL+I+AKD G L+ C++ V++ D ND PE++++S+++P+ E
Sbjct: 299 GEITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPE 358
Query: 359 NSPE-TVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEY 417
+SP TV+A+ + RDRDSG NG+ C + + FILK S +N+Y LVT+ LDRE EY
Sbjct: 359 DSPPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEY 418
Query: 418 NITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATD 477
N+TIT TD G P L + +T+ +SDVNDNAP F QTSY + V ENN P I +SA+D
Sbjct: 419 NLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASD 478
Query: 478 RDSGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRG 537
D G + QV YS++ S + S VS++A +G +FA R+ D+E L+AFE + A D+G
Sbjct: 479 PDLGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQG 538
Query: 538 SPALSSEALVRVLVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDS 596
SPALS+ +RVLV D NDN+P VLYP L + + +PRAAEPGYLVTKVVAVD DS
Sbjct: 539 SPALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADS 598
Query: 597 GQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATA 656
G NAWLSY +L+A+EPGLF + GEVRTAR L +RDAA+QRL+V V+D G+PP SATA
Sbjct: 599 GHNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATA 658
Query: 657 TLHVLLVDGFSQ--PYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRR 714
TLH++ D + P L D L YLVVALA +S LF L+V+L +++RL R
Sbjct: 659 TLHLIFADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRL-RL 717
Query: 715 SRAAPVGRCSVP---EGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPN 771
S + C P P P L + S GTL Y Y +C+ S EF FL I P
Sbjct: 718 SSRSDAWDCFQPGLSSKPGPGVLPNYS-EGTL--PYSYNLCVASQSAKTEFNFLN-ITPE 773
Query: 772 LLP 774
L+P
Sbjct: 774 LVP 776
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 631 bits (1627), Expect = 0.0
Identities = 350/767 (45%), Positives = 484/767 (63%), Gaps = 17/767 (2%)
Query: 13 QVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQN 71
+++ LC+ L + AGA + Y V EET++G+F+ N+AKDLGL EL G RIVS
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 MQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAP 131
M + L+ +G L+ ++DREELC PC++ F +L+E ++F E+ + DIND+ P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 VFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIY 191
F E+ K+ E TTPG L QD DVG NSL +Y +S N +F ++V +G +
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQV 251
PE+VL LDREE L LTA DGG P RSGT + I V+D NDN P F ++ Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 PENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEA 311
PEN P+G+ ++ V+A D D G+NGE+ Y+F R+ + F+++ +G + K LD+E
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 IQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAEN-SPETVVAVFRI 370
+ Y++ +QA+DG GL K V++ V D+NDN PE+ ++S+T+ + EN P T++A+ +
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 371 RDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPR 430
D+DSG+NG T C I ++PF L+ V+N+Y LVTE+ LDRE + YNITIT D GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 431 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSL 490
L TE +I++LV+D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+ YSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 491 LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 550
+ PL++ +SIN+D G L+ALRS DYE + + +V A D G P LSS + +
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
+LD NDN+P +LYP L + E P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D S
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 670 YLRL----PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AAPV 720
L P A P+ ++ LT+YLVVA A+VS +FL V++ +A RL R +SR A+
Sbjct: 672 LADLGSLEPSAKPNDSD-LTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767
G S+P H V + G Q+Y +EV LT S + F +P
Sbjct: 731 GLASMPGS----HFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 631 bits (1627), Expect = 0.0
Identities = 350/767 (45%), Positives = 484/767 (63%), Gaps = 17/767 (2%)
Query: 13 QVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSDQN 71
+++ LC+ L + AGA + Y V EET++G+F+ N+AKDLGL EL G RIVS
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 MQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDHAP 131
M + L+ +G L+ ++DREELC PC++ F +L+E ++F E+ + DIND+ P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 VFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGNIY 191
F E+ K+ E TTPG L QD DVG NSL +Y +S N +F ++V +G +
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQV 251
PE+VL LDREE L LTA DGG P RSGT + I V+D NDN P F ++ Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 PENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDYEA 311
PEN P+G+ ++ V+A D D G+NGE+ Y+F R+ + F+++ +G + K LD+E
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 IQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAEN-SPETVVAVFRI 370
+ Y++ +QA+DG GL K V++ V D+NDN PE+ ++S+T+ + EN P T++A+ +
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 371 RDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPR 430
D+DSG+NG T C I ++PF L+ V+N+Y LVTE+ LDRE + YNITIT D GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 431 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYSL 490
L TE +I++LV+D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+ YSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 491 LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 550
+ PL++ +SIN+D G L+ALRS DYE + + +V A D G P LSS + +
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
+LD NDN+P +LYP L + E P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D S
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 670 YLRL----PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AAPV 720
L P A P+ ++ LT+YLVVA A+VS +FL V++ +A RL R +SR A+
Sbjct: 672 LADLGSLEPSAKPNDSD-LTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767
G S+P H V + G Q+Y +EV LT S + F +P
Sbjct: 731 GLASMPGS----HFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,167,038
Number of Sequences: 37866
Number of extensions: 1390968
Number of successful extensions: 10053
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2905
Number of HSP's gapped (non-prelim): 682
length of query: 793
length of database: 18,247,518
effective HSP length: 110
effective length of query: 683
effective length of database: 14,082,258
effective search space: 9618182214
effective search space used: 9618182214
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.