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Search of human proteins with 156523268
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156523268 transcriptional adaptor 2 (ADA2 homolog,
yeast)-beta [Homo sapiens]
(420 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156523268 transcriptional adaptor 2 (ADA2 homolog, yeast)-bet... 857 0.0
gi|68509270 transcriptional adaptor 2-like isoform a [Homo sapiens] 159 4e-39
gi|68509268 transcriptional adaptor 2-like isoform b [Homo sapiens] 121 1e-27
gi|42718005 dystrobrevin alpha isoform 1 [Homo sapiens] 42 0.001
gi|42718003 dystrobrevin alpha isoform 3 [Homo sapiens] 42 0.001
gi|56549694 enabled homolog isoform a [Homo sapiens] 40 0.004
gi|39930375 enabled homolog isoform b [Homo sapiens] 40 0.004
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 40 0.005
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 39 0.007
gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens] 39 0.009
gi|42718001 dystrobrevin alpha isoform 4 [Homo sapiens] 39 0.009
gi|42717997 dystrobrevin alpha isoform 5 [Homo sapiens] 39 0.009
gi|42717994 dystrobrevin alpha isoform 7 [Homo sapiens] 39 0.009
gi|189571587 dystrobrevin alpha isoform 9 [Homo sapiens] 39 0.009
gi|116686122 kinesin family member 4 [Homo sapiens] 39 0.012
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 38 0.015
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 38 0.015
gi|148746195 trichohyalin [Homo sapiens] 38 0.015
gi|11276069 dystrobrevin, beta isoform 1 [Homo sapiens] 38 0.020
gi|15147341 dystrobrevin, beta isoform 3 [Homo sapiens] 38 0.020
gi|37577099 dystrobrevin, beta isoform 2 [Homo sapiens] 38 0.020
gi|37577097 dystrobrevin, beta isoform 5 [Homo sapiens] 38 0.020
gi|37577095 dystrobrevin, beta isoform 4 [Homo sapiens] 38 0.020
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 37 0.026
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 37 0.026
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 37 0.026
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 37 0.026
gi|155030242 WD repeat domain 60 [Homo sapiens] 37 0.034
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 36 0.057
>gi|156523268 transcriptional adaptor 2 (ADA2 homolog, yeast)-beta
[Homo sapiens]
Length = 420
Score = 857 bits (2215), Expect = 0.0
Identities = 420/420 (100%), Positives = 420/420 (100%)
Query: 1 MAELGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFT 60
MAELGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFT
Sbjct: 1 MAELGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFT 60
Query: 61 LWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLG 120
LWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLG
Sbjct: 61 LWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLG 120
Query: 121 KACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQD 180
KACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQD
Sbjct: 121 KACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQD 180
Query: 181 AETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEK 240
AETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEK
Sbjct: 181 AETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEK 240
Query: 241 EKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGIT 300
EKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGIT
Sbjct: 241 EKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGIT 300
Query: 301 KMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCS 360
KMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCS
Sbjct: 301 KMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCS 360
Query: 361 SLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWISRDAS 420
SLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWISRDAS
Sbjct: 361 SLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWISRDAS 420
>gi|68509270 transcriptional adaptor 2-like isoform a [Homo sapiens]
Length = 443
Score = 159 bits (402), Expect = 4e-39
Identities = 121/445 (27%), Positives = 204/445 (45%), Gaps = 49/445 (11%)
Query: 6 KKYCVYCLAEVSPLRFRCTEC--QDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
K C C + + +C EC LC +CF+ G E H+ H Y+++ T
Sbjct: 14 KPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIM-----TSDF 68
Query: 64 PEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKAC 123
P + WT++EE LL+A+ GFGNW+D+A + ++T +E +HY+ +I+ L +
Sbjct: 69 PVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHYMKHFINNPLFAST 127
Query: 124 IPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAET 183
+ + + T + P + P P D S+ + GYMP R D+ E+D AE
Sbjct: 128 LLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPARADFIEEFDNYAEW 185
Query: 184 LISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKA 243
+ + DD D+ LK A VD+Y +LKERQRRK I RD+ L+ K +
Sbjct: 186 DLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-------NLRKFQL 238
Query: 244 LKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKME 303
++R+ KE ++L +R + + E D E+ E LR +I+ LQ YR GIT
Sbjct: 239 MERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFC 298
Query: 304 ESAEYEAARHKREKRKENKNLAGS-----------------KRGKEDGKDSEFAAIEN-- 344
+ Y+ + RE+ + + + + + G N
Sbjct: 299 SARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSG 358
Query: 345 -----------LPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIP-SKSR 392
LPG E L+++EK LC + L P Y+ K+ ++ + K+ G+ +++R
Sbjct: 359 RRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNE-CNKQGGLRLAQAR 417
Query: 393 LPSYLDKVLKKRILNFLTESGWISR 417
+D ++I +FL G+I++
Sbjct: 418 ALIKIDVNKTRKIYDFLIREGYITK 442
>gi|68509268 transcriptional adaptor 2-like isoform b [Homo sapiens]
Length = 305
Score = 121 bits (304), Expect = 1e-27
Identities = 83/274 (30%), Positives = 134/274 (48%), Gaps = 17/274 (6%)
Query: 6 KKYCVYCLAEVSPLRFRCTEC--QDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
K C C + + +C EC LC +CF+ G E H+ H Y+++ T
Sbjct: 14 KPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIM-----TSDF 68
Query: 64 PEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKAC 123
P + WT++EE LL+A+ GFGNW+D+A + ++T +E +HY+ +I+ L +
Sbjct: 69 PVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHYMKHFINNPLFAST 127
Query: 124 IPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAET 183
+ + + T + P + P P D S+ + GYMP R D+ E+D AE
Sbjct: 128 LLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPARADFIEEFDNYAEW 185
Query: 184 LISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKA 243
+ + DD D+ LK A VD+Y +LKERQRRK I RD+ L+ K +
Sbjct: 186 DLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-------NLRKFQL 238
Query: 244 LKRKITKEEKELRLKLRPLYQFMSCKEFDDLFEN 277
++R+ KE ++L +R + + E D E+
Sbjct: 239 MERRYPKEVQDLYETMRRFARIVGPVEHDKFIES 272
>gi|42718005 dystrobrevin alpha isoform 1 [Homo sapiens]
Length = 743
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 37/165 (22%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAE 67
C YC +E + R+RC +C + +LC +CF G G H H + +T W A
Sbjct: 243 CSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMK-----EYTSWKSPA- 296
Query: 68 GGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDT 127
+ L +A+ + + +SR P M L A I DT
Sbjct: 297 --------KKLTNALSK---------SLSCASSREPLHPM---FPDQPEKPLNLAHIVDT 336
Query: 128 IPNR--------VTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQL 164
P R + H+ PS G SP +T PP D V + + L
Sbjct: 337 WPPRPVTSMNDTLFSHSVPSSG--SPFITRSSPPKDSEVEQNKLL 379
>gi|42718003 dystrobrevin alpha isoform 3 [Homo sapiens]
Length = 570
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 37/165 (22%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAE 67
C YC +E + R+RC +C + +LC +CF G G H H + +T W A
Sbjct: 243 CSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMK-----EYTSWKSPA- 296
Query: 68 GGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDT 127
+ L +A+ + + +SR P M L A I DT
Sbjct: 297 --------KKLTNALSK---------SLSCASSREPLHPM---FPDQPEKPLNLAHIVDT 336
Query: 128 IPNR--------VTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQL 164
P R + H+ PS G SP +T PP D V + + L
Sbjct: 337 WPPRPVTSMNDTLFSHSVPSSG--SPFITRSSPPKDSEVEQNKLL 379
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 40.0 bits (92), Expect = 0.004
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 37/195 (18%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRL 257
E+E++R R+L+E+QR+K + R+ L +++ E+E+ + ++ +E RL
Sbjct: 139 ELEIQR-------RQLQEQQRQKELERER------LERERMERERLERERLERE----RL 181
Query: 258 KLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREK 317
+ L Q E + +E+ R + L+R R + + E E +R++
Sbjct: 182 ERERLEQ-----------EQLERERQERERQERLERQER--LERQERLERQERLDRERQE 228
Query: 318 RKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCSSLNLSPARYVTVKTIII 377
R+E + L +R +++ + E L +L +RE+ + S+ +PA T ++
Sbjct: 229 RQERERLERLERERQERERQ-----EQLEREQLEWERERRISSA--AAPASVETPLNSVL 281
Query: 378 KDHLQKRQGIPSKSR 392
D G+ + S+
Sbjct: 282 GDSSASEPGLQAASQ 296
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 40.0 bits (92), Expect = 0.004
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 37/195 (18%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRL 257
E+E++R R+L+E+QR+K + R+ L +++ E+E+ + ++ +E RL
Sbjct: 139 ELEIQR-------RQLQEQQRQKELERER------LERERMERERLERERLERE----RL 181
Query: 258 KLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREK 317
+ L Q E + +E+ R + L+R R + + E E +R++
Sbjct: 182 ERERLEQ-----------EQLERERQERERQERLERQER--LERQERLERQERLDRERQE 228
Query: 318 RKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCSSLNLSPARYVTVKTIII 377
R+E + L +R +++ + E L +L +RE+ + S+ +PA T ++
Sbjct: 229 RQERERLERLERERQERERQ-----EQLEREQLEWERERRISSA--AAPASVETPLNSVL 281
Query: 378 KDHLQKRQGIPSKSR 392
D G+ + S+
Sbjct: 282 GDSSASEPGLQAASQ 296
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 39.7 bits (91), Expect = 0.005
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 24/139 (17%)
Query: 211 RKLKERQRRKNIARDYNLVPAFLGKDKKEKE-------KALKRKITKEEKELRLKLRPLY 263
RK KE++ R +++ GK+++ KE K +RK + EKE K R
Sbjct: 115 RKKKEKKERGRTSKE--------GKERERKEERKREERKERERKKEEREKERERKERKKR 166
Query: 264 QFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENK- 322
+ E ++ E KE+ R K RE R R + +E E + R K+E+RK+ +
Sbjct: 167 ERKQVGEKEE--ERKEKERKERKK-RERNRKERKKERERKERRERKKERKKKEERKKERQ 223
Query: 323 -----NLAGSKRGKEDGKD 336
N +RGK + K+
Sbjct: 224 KDRQTNWREKERGKRERKE 242
Score = 35.0 bits (79), Expect = 0.13
Identities = 25/109 (22%), Positives = 53/109 (48%)
Query: 214 KERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDD 273
+ER+R + R+ +++KE++K ++++ ++E+E + K R + +
Sbjct: 137 EERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKER 196
Query: 274 LFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENK 322
E KE+ R K R+ + R+ K ++ E R KRE+++ K
Sbjct: 197 KKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 33.5 bits (75), Expect = 0.37
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 212 KLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEF 271
+++ER+R ++ GK ++E E+ +R+ ++ K R K R
Sbjct: 37 EIREREREIETRKE--------GKKERESERKKERREREKRKREREKERKR--------- 79
Query: 272 DDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGK 331
E KEK K E +R +R + +E E E KR+K+++ + SK GK
Sbjct: 80 ----ERGKKEKKGERKKEERERKKRRREKENKEGEEKE----KRKKKEKKERGRTSKEGK 131
Query: 332 EDGKDSEFAAIENLPGFELLSDREK 356
E + E E +REK
Sbjct: 132 ERERKEERKREERKERERKKEEREK 156
Score = 32.3 bits (72), Expect = 0.83
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKE--EKEL 255
E E K+ + RK +ER++ + R K+++E++K + K KE EKE
Sbjct: 56 ESERKKERREREKRK-REREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEK 114
Query: 256 RLKLRPLYQFMSCKEF------DDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYE 309
R K + + KE ++ KE+ + + RE +R R+ + + +
Sbjct: 115 RKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEK 174
Query: 310 AARHKREKRKENKNLAGSKRGKEDGKD 336
K ++RKE K +++ ++ ++
Sbjct: 175 EEERKEKERKERKKRERNRKERKKERE 201
Score = 30.8 bits (68), Expect = 2.4
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 257 LKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAA---RH 313
+KL Q +SC + +R + RE++ R+ G + E + E +
Sbjct: 11 VKLNTELQMVSCSHISKPCTQPGWQSEIREREREIET-RKEGKKERESERKKERREREKR 69
Query: 314 KREKRKENKNLAGSKRGKEDGKDSE 338
KRE+ KE K G K K + K E
Sbjct: 70 KREREKERKRERGKKEKKGERKKEE 94
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 39.7 bits (91), Expect = 0.005
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 211 RKLKERQRRKNIARDYNLVPAFLGK-------------DKKEKEKALKRKITKEEKELRL 257
RK +E + + D ++PA K DKK+K+K K+K KEEKE
Sbjct: 274 RKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKK-KKKGEKEEKEKEK 332
Query: 258 KLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREK 317
K P + K + + KE+ R K E +R +R + + E + KRE+
Sbjct: 333 KKGP--SKATVKAMQEALAKL-KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRER 389
Query: 318 RKENKNLAGSKRGKEDGK 335
+K+ K +R K++GK
Sbjct: 390 KKQ-KEKERKERLKKEGK 406
Score = 35.0 bits (79), Expect = 0.13
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 30/170 (17%)
Query: 191 NYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEK-EKALKRKIT 249
++D+DD+ EL+ ++ + +K + + N F KDKK+K +K K+
Sbjct: 52 DFDEDDILKELEELSLE--AQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFD 109
Query: 250 K------EEKELRLK--LRPLYQFMSCKEFDDLFENMHKEKMLRA--------------- 286
E+K+ + K +P + S + DD F + K+ +A
Sbjct: 110 DNDSEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDED 169
Query: 287 ---KIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKED 333
KI+E R +G + +ES E+ +R ++K ++NK + G ED
Sbjct: 170 NSKKIKERSRINSSGESG-DESDEFLQSRKGQKKNQKNKPGPNIESGNED 218
Score = 29.3 bits (64), Expect = 7.0
Identities = 30/161 (18%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRL 257
E+E KR + ++ +ER+++K K++KE+ K + +TK ++E R
Sbjct: 371 ELEAKRKEEERLEQEKRERKKQKE-------------KERKERLKKEGKLLTKSQREARA 417
Query: 258 KLRPLYQFMSCKEFD-DLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKRE 316
+ + + + + +++ K++ + + + ++ ++ ES E AA E
Sbjct: 418 RAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSESMELCAAVEVME 477
Query: 317 KRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKV 357
+ K E+ +D+E A +++ + EKV
Sbjct: 478 QGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKV 518
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 39.3 bits (90), Expect = 0.007
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 193 DDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKR--KITK 250
+ ++E++ KR + ++R +E QR K + + +K EK + + ++ K
Sbjct: 686 EQQEIELQKKRQEEETFLRVQEELQRLKELNNN----------EKAEKFQIFQELDQLQK 735
Query: 251 EEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKM-EESAEYE 309
E+ E KL + + +E + + H E+ LR K +Q RR + + EE + E
Sbjct: 736 EKDEQYAKLELEKKRLEEQEKEQVMLVAHLEEQLREKQEMIQLLRRGEVQWVEEEKRDLE 795
Query: 310 AARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCSSLNLSPARY 369
R + KE + AG G EDG++ E A L FE + + L +NL +
Sbjct: 796 GIRESLLRVKEAR--AG---GDEDGEELEKA---QLRFFEF---KRRQLVKLVNLE--KD 842
Query: 370 VTVKTIIIKDHLQKRQGI 387
+ + I+K +Q+ Q I
Sbjct: 843 LVQQKDILKKEVQEEQEI 860
>gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens]
Length = 686
Score = 38.9 bits (89), Expect = 0.009
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC +E + R+RC +C + +LC +CF G G H H
Sbjct: 243 CSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQH 284
>gi|42718001 dystrobrevin alpha isoform 4 [Homo sapiens]
Length = 567
Score = 38.9 bits (89), Expect = 0.009
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC +E + R+RC +C + +LC +CF G G H H
Sbjct: 243 CSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQH 284
>gi|42717997 dystrobrevin alpha isoform 5 [Homo sapiens]
Length = 513
Score = 38.9 bits (89), Expect = 0.009
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC +E + R+RC +C + +LC +CF G G H H
Sbjct: 243 CSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQH 284
>gi|42717994 dystrobrevin alpha isoform 7 [Homo sapiens]
Length = 374
Score = 38.9 bits (89), Expect = 0.009
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC +E + R+RC +C + +LC +CF G G H H
Sbjct: 243 CSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQH 284
>gi|189571587 dystrobrevin alpha isoform 9 [Homo sapiens]
Length = 371
Score = 38.9 bits (89), Expect = 0.009
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC +E + R+RC +C + +LC +CF G G H H
Sbjct: 243 CSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQH 284
>gi|116686122 kinesin family member 4 [Homo sapiens]
Length = 1232
Score = 38.5 bits (88), Expect = 0.012
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 168 PLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYN 227
P++ Y+ D E + +++ + +++ +EL+ A D KL ER+R++ ++
Sbjct: 552 PIQYQYQ---DNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKR--LQELE 606
Query: 228 LVPAFLGKDKKEKEKALK------RKITKEEKELRLKLRPLYQFM-SCKEFDDLFENMHK 280
A L K E+ K LK R ++K +E+R+ Q M KE + F +
Sbjct: 607 GQIADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQ 666
Query: 281 EKMLRA-KIRELQRYRRNGITKMEES-----------AEYEAARHKREK---RKENKNLA 325
+K +++E R R+ + K+E + E AA +KR K +K+ +
Sbjct: 667 KKDKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQREVAD 726
Query: 326 GSKRGKEDGKDSEFAAIENLPGFEL 350
K + G + A ++N G E+
Sbjct: 727 KRKETQSRGMEGTAARVKNWLGNEI 751
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 38.1 bits (87), Expect = 0.015
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 33/185 (17%)
Query: 160 EQQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRR 219
E++++ M L + +E+ ++ D D + LK A +Y KLK+ + R
Sbjct: 729 EEERITTMQLEREKALEHKNRMSRMLE------DRDLFVMRLKAARQSVYEEKLKQFEER 782
Query: 220 KNIARDYNLVPAFLGKDKKEKEKALKRKIT----KEEKELRLKLRPLYQFMSCKEFDDLF 275
R L +++++++ +R+IT KEE+E R E L
Sbjct: 783 LAEERHNRL-------EERKRQRKEERRITYYREKEEEEQRRA-----------EEQMLK 824
Query: 276 ENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAAR-----HKREKRKENKNLAGSKRG 330
E +E+ RAK E R + + K+EE + R + +R+E + L S
Sbjct: 825 EREERERAERAKREEELREYQERVKKLEEVERKKRQRELEIEERERRREEERRLGDSSLS 884
Query: 331 KEDGK 335
++D +
Sbjct: 885 RKDSR 889
Score = 32.3 bits (72), Expect = 0.83
Identities = 35/159 (22%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 201 LKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLR 260
+K AH+ L+E++ + +A V A+L +KE ++ L R+ T EE++ RL+
Sbjct: 537 IKPAHI------LQEKEEQHQLA-----VTAYLKNSRKEHQRILARRQTIEERKERLESL 585
Query: 261 PLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKE 320
+ +E ++L + ++ + + E +R R+ + +E E + K++ +E
Sbjct: 586 NIQ-----REKEEL--EQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRE 638
Query: 321 N-KNLAGSKRGKEDGKDSEFAAIENL-PGFELLSDREKV 357
+ + ++ G + KD + +E L P F + E++
Sbjct: 639 RLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQL 677
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 38.1 bits (87), Expect = 0.015
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRL 257
E E KR +K K+R+R K R K +KE+ + +RK KE+K+
Sbjct: 51 EKERKRERGKKEKKKRKKRERGKERERKRKERE----KQRKERREKERRKRKKEKKKRER 106
Query: 258 KLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREK 317
K R + KE + E +K++ R + + ++ RR + +E + E R KR+K
Sbjct: 107 KQRGRRERKKKKERKER-ERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKK 165
Query: 318 RKENKNLAGSKRGKEDGKD 336
+ K +++ ++ ++
Sbjct: 166 EEREKKRERNRKERKKERE 184
Score = 36.6 bits (83), Expect = 0.044
Identities = 25/128 (19%), Positives = 58/128 (45%)
Query: 211 RKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKE 270
R+ KER++RK + + KK+KE+ + + K+ +E + K R + ++
Sbjct: 89 RREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERK 148
Query: 271 FDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRG 330
+ +++ R K ++ RN + +E E K+E++KE + K+
Sbjct: 149 REKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKD 208
Query: 331 KEDGKDSE 338
++ + ++
Sbjct: 209 RKTDRQTD 216
Score = 34.7 bits (78), Expect = 0.17
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 26/104 (25%)
Query: 235 KDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRY 294
K K+E+EK KR+ K+EK+ R K KE+ + K RE QR
Sbjct: 45 KRKREREKERKRERGKKEKKKRKK-----------------RERGKERERKRKEREKQR- 86
Query: 295 RRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSE 338
+E E E + K+EK+K + G + K+ + E
Sbjct: 87 --------KERREKERRKRKKEKKKRERKQRGRRERKKKKERKE 122
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.1 bits (87), Expect = 0.015
Identities = 41/200 (20%), Positives = 93/200 (46%), Gaps = 29/200 (14%)
Query: 160 EQQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRR 219
EQQ R + ++ +Q+ E L +++ E +L+R + +R+ ++ +R
Sbjct: 336 EQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRR---EQQLRREQQLRRE 392
Query: 220 KNIARDYNLVPAFLGKDKKEKEKALKRKIT-KEEKELRLKLRPLYQFMSCKEFDDLFENM 278
+ + R+ L +E+ L+R+ + E++LR + Q + ++ ++ E
Sbjct: 393 QQLRREQQL----------RREQQLRREQQLRREQQLRRE-----QQLRREQEEERHEQK 437
Query: 279 HKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSE 338
H+++ +++ Q RR+ + + EE+ RH++E+RK+ KR +E+ +
Sbjct: 438 HEQERREQRLKREQEERRDWLKREEET-----ERHEQERRKQQ-----LKRDQEEERRER 487
Query: 339 FAAIENLPGFELLSDREKVL 358
+ +E E RE+ L
Sbjct: 488 WLKLEEEERREQQERREQQL 507
Score = 35.8 bits (81), Expect = 0.075
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 212 KLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEF 271
KL+E +RR+ R + ++E+E+ ++++ ++E+E RL+ R + +E
Sbjct: 490 KLEEEERREQQERREQQL-------RREQEERREQRLKRQEEEERLQQRLRSEQQLRREQ 542
Query: 272 DDLFENMHK---EKMLRAKIREL-----QRYRRNGITKMEESAEYEAARHKREKRKENK 322
++ E + K EK L + RE Q RR+ + K EE + + ++E+R E +
Sbjct: 543 EERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQR 601
Score = 33.5 bits (75), Expect = 0.37
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNL-------VPAFLGKDKKEKEKALKRKITK 250
E E + + +R+ +E++RR+ R Y LG++ +++ + + K +
Sbjct: 932 EEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYR 991
Query: 251 EEKELRLKLRPLYQFMSCKEFDDLFENMHKEK-MLRAKIRELQRYRRNGITKMEESAEYE 309
EE+EL+ + L + K +E +++K L+ + +L R R E +Y
Sbjct: 992 EEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQY- 1050
Query: 310 AARHKREKRKENKNLAGSKR 329
R + E ++E + L G +R
Sbjct: 1051 --REEEELQQEEEQLLGEER 1068
Score = 32.3 bits (72), Expect = 0.83
Identities = 23/114 (20%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 211 RKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLY----QFM 266
R+ ++R+ R+ R FL ++++ + + +RK KEE++LR + R +
Sbjct: 1355 RQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQLRQDRDR 1414
Query: 267 SCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKE 320
+E + +++ R + ++++R R +EE + RH++ + +E
Sbjct: 1415 KFREEEQQLSRQERDRKFREEEQQVRRQERER-KFLEEEQQLRQERHRKFREEE 1467
Score = 32.0 bits (71), Expect = 1.1
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKR----KITKEEK 253
E +L+R + ++LK ++ + + + + ++ +E+ LKR ++ +E +
Sbjct: 504 EQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERR 563
Query: 254 ELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARH 313
E RLK + D L + + + R K + +R + + E E E R
Sbjct: 564 EQRLKRE------QEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERRE 617
Query: 314 KREKRKE 320
+R KR+E
Sbjct: 618 QRLKREE 624
Score = 31.6 bits (70), Expect = 1.4
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 207 DMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFM 266
+ +R+ +E++RR+ R Y KK++ + + ++ +EE+E R Q+
Sbjct: 1001 EQLLREEREKRRRQEWERQYR---------KKDELQQEEEQLLREEREKRRLQERERQYR 1051
Query: 267 SCKEFDDLFENMHKEKMLRAKIRELQR-YRRNGITKMEESAEYEAARHKREKRKENKNLA 325
+E E + E+ + +EL+R YR+ + EE + R + EKR+ +
Sbjct: 1052 EEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEE---QLLREEPEKRRRQERER 1108
Query: 326 GSKRGKEDGKDSE 338
+ +E ++ E
Sbjct: 1109 QCREEEELQQEEE 1121
Score = 31.2 bits (69), Expect = 1.8
Identities = 37/176 (21%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 169 LRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNL 228
LR D + ++ ++ + L G E +L+R D R+ +++ RR+ R
Sbjct: 1661 LRHDRDRKFREEEQLLQEG---------EEQQLRRQERDRKFREEEQQLRRQERER---- 1707
Query: 229 VPAFLGKDKKEKEKALKRKITKEEKELRL-----KLRPLYQFMSCKEFDDLFENMHKEKM 283
FL ++++ + + L+RK +EE++LR +LR ++ E + L ++++
Sbjct: 1708 --KFLQEEQQLRRQELERKF-REEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQL 1764
Query: 284 LR----AKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKEDGK 335
R K RE ++ R+ + S E + + E+ ++ + + + DGK
Sbjct: 1765 RRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEEQLRQEREEQQLRPQQRDGK 1820
Score = 30.4 bits (67), Expect = 3.1
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 214 KERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDD 273
+E +RR+ + R Y K+E+ + + ++ +EE E R + Q +E
Sbjct: 1068 RETRRRQELERQYR---------KEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQ 1118
Query: 274 LFENMHKEKMLRAKIRELQR-YRRNGITKMEESAEYEAARHKREKRKENK 322
E + +E+ + + +EL+R YR + EE + R + EKR+ +
Sbjct: 1119 EEEQLLREEREKRRRQELERQYREEEEVQQEEE---QLLREEPEKRRRQE 1165
Score = 29.3 bits (64), Expect = 7.0
Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 211 RKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKE 270
R+ ++R+ R+ R FL ++++ + +RK +EE++LR + R +
Sbjct: 1496 RQERDRKFREQELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQER------GQQR 1549
Query: 271 FDDLFENMHKEKMLRAKIRE--LQRYRRNGITKMEES--AEYEAARHKREKRKENKNLAG 326
D +E+ LR + E L R R+ ++EE E R E ++ + G
Sbjct: 1550 RQDRDRKFREEEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEG 1609
Query: 327 SKRGKEDGKDSEFAAIENLPGFELLSDREK 356
++ +++ +D +F E +LL +RE+
Sbjct: 1610 QQQLRQE-RDRKFREDE-----QLLQEREE 1633
Score = 28.9 bits (63), Expect = 9.1
Identities = 28/138 (20%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 198 EIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKR---KITKEEKE 254
E +L+R + RK +E ++++ R + K+ +++E L++ K+ +EE +
Sbjct: 207 EEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQ 266
Query: 255 LRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHK 314
+ +L+ + + E +L +E+ + ++R Q+ RR K EE E +
Sbjct: 267 RQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRR----KQEE----ERREQQ 318
Query: 315 REKRKENKNLAGSKRGKE 332
E+R++ + + +E
Sbjct: 319 EERREQQERREQQEERRE 336
Score = 28.9 bits (63), Expect = 9.1
Identities = 24/127 (18%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 207 DMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFM 266
+ +R+ +E++R + R Y ++E+ + + ++ EE+E R + Q+
Sbjct: 1031 EQLLREEREKRRLQERERQYR---------EEEELQQEEEQLLGEERETRRRQELERQYR 1081
Query: 267 SCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAG 326
+E +E++LR + + +R R + EE + E + RE+R++ +
Sbjct: 1082 KEEELQQ-----EEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQEL 1136
Query: 327 SKRGKED 333
++ +E+
Sbjct: 1137 ERQYREE 1143
>gi|11276069 dystrobrevin, beta isoform 1 [Homo sapiens]
Length = 627
Score = 37.7 bits (86), Expect = 0.020
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC E + R+RC +C + +LC CF G G H H
Sbjct: 243 CSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQH 284
>gi|15147341 dystrobrevin, beta isoform 3 [Homo sapiens]
Length = 567
Score = 37.7 bits (86), Expect = 0.020
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC E + R+RC +C + +LC CF G G H H
Sbjct: 243 CSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQH 284
>gi|37577099 dystrobrevin, beta isoform 2 [Homo sapiens]
Length = 597
Score = 37.7 bits (86), Expect = 0.020
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC E + R+RC +C + +LC CF G G H H
Sbjct: 243 CSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQH 284
>gi|37577097 dystrobrevin, beta isoform 5 [Homo sapiens]
Length = 560
Score = 37.7 bits (86), Expect = 0.020
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC E + R+RC +C + +LC CF G G H H
Sbjct: 243 CSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQH 284
>gi|37577095 dystrobrevin, beta isoform 4 [Homo sapiens]
Length = 609
Score = 37.7 bits (86), Expect = 0.020
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 9 CVYCLAE-VSPLRFRCTECQDIELCPECFSAGAEIGHHRRYH 49
C YC E + R+RC +C + +LC CF G G H H
Sbjct: 243 CSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQH 284
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 37.4 bits (85), Expect = 0.026
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 40/165 (24%)
Query: 192 YDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKE 251
++D D +++LK D VRK KE+ + K R+ K KK+K+K K K+ +
Sbjct: 595 FEDVDPKVKLK----DGLVRKEKEKHKDKKKDRE---------KGKKDKDKREKEKVKDK 641
Query: 252 EKELRLKLRPLYQFMSCKEF-------------------------DDLFENMHKEKMLRA 286
+E ++K + KE + LFE KEK+
Sbjct: 642 GREDKMKAPAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLPEKLFEE--KEKVKEK 699
Query: 287 KIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGK 331
+ ++ ++ ++ K +E E E + KRE+ K K K K
Sbjct: 700 EKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHKHEK 744
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 37.4 bits (85), Expect = 0.026
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 235 KDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRY 294
K + E AL + K+EKELR + + ++ E + KE+ K ++ Q
Sbjct: 462 KARIHAETALLMEKNKQEKELRERQQ-----------EEQKEKLRKEEQ-EQKAKKKQEA 509
Query: 295 RRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKE 332
N IT+ ++ A+ E + + E+ K+ +KRGKE
Sbjct: 510 EENEITEKQQKAKEEMEKKESEQAKKEDKETSAKRGKE 547
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 37.4 bits (85), Expect = 0.026
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 235 KDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRY 294
K + E AL + K+EKELR + + ++ E + KE+ K ++ Q
Sbjct: 462 KARIHAETALLMEKNKQEKELRERQQ-----------EEQKEKLRKEEQ-EQKAKKKQEA 509
Query: 295 RRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKE 332
N IT+ ++ A+ E + + E+ K+ +KRGKE
Sbjct: 510 EENEITEKQQKAKEEMEKKESEQAKKEDKETSAKRGKE 547
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 37.4 bits (85), Expect = 0.026
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 235 KDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRY 294
K + E AL + K+EKELR + + ++ E + KE+ K ++ Q
Sbjct: 462 KARIHAETALLMEKNKQEKELRERQQ-----------EEQKEKLRKEEQ-EQKAKKKQEA 509
Query: 295 RRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKE 332
N IT+ ++ A+ E + + E+ K+ +KRGKE
Sbjct: 510 EENEITEKQQKAKEEMEKKESEQAKKEDKETSAKRGKE 547
>gi|155030242 WD repeat domain 60 [Homo sapiens]
Length = 1066
Score = 37.0 bits (84), Expect = 0.034
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 211 RKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKE----EKELRLKLRPLYQFM 266
R+ +ER+ + ++D N + +L K++ E+ R+ ++ EK + R Y
Sbjct: 185 RRYRERKLQYGDSKD-NPLKYWLYKEEGERRHRKPREPDRDNKHREKSSTREKREKYSKE 243
Query: 267 SCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAG 326
F D E HKEK + ++ + + E+SA+ E + + + + A
Sbjct: 244 KSNSFSDKGEERHKEKRHKEGFHFDDERHQSNVDRKEKSAKDEPRKRESQNGEHRNRGAS 303
Query: 327 SKRGKEDGKDSEFAAIENL 345
SKR DG S+ A ENL
Sbjct: 304 SKR---DGTSSQHA--ENL 317
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 36.2 bits (82), Expect = 0.057
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 63 GPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
G A WT +E LLL+A+E + +W ++ HVG SRT E + H++ + I
Sbjct: 616 GASAGREWTEQETLLLLEALEMYK-DDWNKVSEHVG-SRTQDECILHFLRLPI 666
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,007,595
Number of Sequences: 37866
Number of extensions: 843791
Number of successful extensions: 5144
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 4586
Number of HSP's gapped (non-prelim): 683
length of query: 420
length of database: 18,247,518
effective HSP length: 105
effective length of query: 315
effective length of database: 14,271,588
effective search space: 4495550220
effective search space used: 4495550220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.