Guide to the Human Genome
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Name: DTNA Sequence: fasta or formatted (686aa) NCBI GI: 42717999
Description:

dystrobrevin alpha isoform 2

Referenced in:

Synapses

Other entries for this name:
alt prot [192aa] dystrobrevin alpha isoform 8
alt prot [371aa] dystrobrevin alpha isoform 9
alt prot [374aa] dystrobrevin alpha isoform 7
alt prot [513aa] dystrobrevin alpha isoform 5
alt prot [567aa] dystrobrevin alpha isoform 4
alt prot [570aa] dystrobrevin alpha isoform 3
alt prot [743aa] dystrobrevin alpha isoform 1
alt prot [391aa] dystrobrevin alpha isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         46           2
 C cysteine            1.9         13           1
 D aspartate           4.5         31           1
 E glutamate           7.6         52           2
 F phenylalanine       3.4         23           1
 G glycine             3.9         27           2
 H histidine           2.9         20           1
 I isoleucine          3.6         25           1
 K lysine              4.2         29           2
 L leucine            10.8         74           3
 M methionine          3.4         23           2
 N asparagine          4.5         31           2
 P proline             5.7         39           3
 Q glutamine           6.9         47           2
 R arginine            6.9         47           2
 S serine             10.2         70           4
 T threonine           5.2         36           2
 V valine              4.7         32           1
 W tryptophan          0.7          5           1
 Y tyrosine            2.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dystrobrevin alpha isoform 2 
DTNA                  0.967   dystrobrevin alpha isoform 1 
DTNA                  0.726   dystrobrevin alpha isoform 5 
DTNA                  0.692   dystrobrevin alpha isoform 3 
DTNA                  0.682   dystrobrevin alpha isoform 4 
DTNB                  0.645   dystrobrevin, beta isoform 1 
DTNB                  0.643   dystrobrevin, beta isoform 4 
DTNB                  0.625   dystrobrevin, beta isoform 5 
DTNB                  0.619   dystrobrevin, beta isoform 3 
DTNB                  0.607   dystrobrevin, beta isoform 2 
DTNA                  0.542   dystrobrevin alpha isoform 7 
DTNA                  0.532   dystrobrevin alpha isoform 9 
DTNA                  0.495   dystrobrevin alpha isoform 6 
DTNA                  0.231   dystrobrevin alpha isoform 8 
DMD                   0.147   dystrophin Dp140ab isoform 
DMD                   0.147   dystrophin Dp71ab isoform 
DMD                   0.146   dystrophin Dp140b isoform 
DMD                   0.146   dystrophin Dp71b isoform 
DMD                   0.140   dystrophin Dp71a isoform 
DMD                   0.139   dystrophin Dp427c isoform 
DMD                   0.139   dystrophin Dp116 isoform 
DMD                   0.139   dystrophin Dp260-2 isoform 
DMD                   0.139   dystrophin Dp260-1 isoform 
DMD                   0.139   dystrophin Dp427p2 isoform 
DMD                   0.139   dystrophin Dp427p1 isoform 
DMD                   0.139   dystrophin Dp71 isoform 
DMD                   0.139   dystrophin Dp140 isoform 
DMD                   0.139   dystrophin Dp427l isoform 
DMD                   0.139   dystrophin Dp427m isoform 
UTRN                  0.129   utrophin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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