Guide to the Human Genome
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Name: DTNB Sequence: fasta or formatted (627aa) NCBI GI: 11276069
Description:

dystrobrevin, beta isoform 1

Referenced in:

Synapses

Other entries for this name:
alt prot [567aa] dystrobrevin, beta isoform 3
alt prot [609aa] dystrobrevin, beta isoform 4
alt prot [560aa] dystrobrevin, beta isoform 5
alt prot [597aa] dystrobrevin, beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         42           2
 C cysteine            2.4         15           1
 D aspartate           3.8         24           1
 E glutamate           7.8         49           5
 F phenylalanine       3.3         21           1
 G glycine             4.5         28           3
 H histidine           4.0         25           1
 I isoleucine          3.5         22           1
 K lysine              4.9         31           2
 L leucine            10.4         65           3
 M methionine          4.5         28           2
 N asparagine          4.1         26           1
 P proline             5.9         37           3
 Q glutamine           6.5         41           2
 R arginine            7.2         45           2
 S serine              8.0         50           2
 T threonine           5.1         32           2
 V valine              4.8         30           1
 W tryptophan          0.6          4           1
 Y tyrosine            1.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dystrobrevin, beta isoform 1 
DTNB                  0.970   dystrobrevin, beta isoform 4 
DTNB                  0.943   dystrobrevin, beta isoform 2 
DTNB                  0.865   dystrobrevin, beta isoform 3 
DTNB                  0.849   dystrobrevin, beta isoform 5 
DTNA                  0.714   dystrobrevin alpha isoform 1 
DTNA                  0.685   dystrobrevin alpha isoform 2 
DTNA                  0.628   dystrobrevin alpha isoform 4 
DTNA                  0.623   dystrobrevin alpha isoform 3 
DTNA                  0.593   dystrobrevin alpha isoform 5 
DTNA                  0.452   dystrobrevin alpha isoform 9 
DTNA                  0.448   dystrobrevin alpha isoform 7 
DTNA                  0.286   dystrobrevin alpha isoform 6 
DTNA                  0.187   dystrobrevin alpha isoform 8 
DMD                   0.142   dystrophin Dp140ab isoform 
DMD                   0.142   dystrophin Dp140b isoform 
DMD                   0.142   dystrophin Dp71ab isoform 
DMD                   0.142   dystrophin Dp71b isoform 
DMD                   0.137   dystrophin Dp427c isoform 
DMD                   0.137   dystrophin Dp116 isoform 
DMD                   0.137   dystrophin Dp260-2 isoform 
DMD                   0.137   dystrophin Dp260-1 isoform 
DMD                   0.137   dystrophin Dp427p2 isoform 
DMD                   0.137   dystrophin Dp427p1 isoform 
DMD                   0.137   dystrophin Dp71a isoform 
DMD                   0.137   dystrophin Dp71 isoform 
DMD                   0.137   dystrophin Dp140 isoform 
DMD                   0.137   dystrophin Dp427l isoform 
DMD                   0.137   dystrophin Dp427m isoform 
UTRN                  0.128   utrophin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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