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Search of human proteins with 156119621
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156119621 inhibitor of DNA binding 3 [Homo sapiens]
(119 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156119621 inhibitor of DNA binding 3 [Homo sapiens] 244 1e-65
gi|31982933 inhibitor of DNA binding 2 [Homo sapiens] 84 2e-17
gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens] 82 7e-17
gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens] 82 7e-17
gi|4504573 inhibitor of DNA binding 4, dominant negative helix-l... 82 7e-17
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 44 2e-05
gi|75677394 transcription factor 23 [Homo sapiens] 37 0.003
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 37 0.005
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo... 37 0.005
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 37 0.005
gi|239754900 PREDICTED: similar to transcription factor 23 [Homo... 35 0.010
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 35 0.010
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 35 0.010
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 35 0.010
gi|206597481 achaete-scute complex-like 4 [Homo sapiens] 35 0.013
gi|116805332 musculin [Homo sapiens] 35 0.013
gi|21553337 atonal homolog 7 [Homo sapiens] 35 0.013
gi|4885075 atonal homolog 1 [Homo sapiens] 35 0.017
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 34 0.029
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 33 0.065
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 33 0.065
gi|38202237 transcription factor 21 [Homo sapiens] 33 0.065
gi|38202239 transcription factor 21 [Homo sapiens] 33 0.065
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 33 0.065
gi|38455396 neurogenin 1 [Homo sapiens] 32 0.14
gi|116517330 factor in the germline alpha [Homo sapiens] 32 0.14
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens] 31 0.25
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 31 0.25
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 31 0.25
gi|148922889 scleraxis homolog B [Homo sapiens] 30 0.42
>gi|156119621 inhibitor of DNA binding 3 [Homo sapiens]
Length = 119
Score = 244 bits (623), Expect = 1e-65
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPR 60
MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPR
Sbjct: 1 MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPR 60
Query: 61 GTQLSQVEILQRVIDYILDLQVVLAEPAPGPPDGPHLPIQTAELTPELVISNDKRSFCH 119
GTQLSQVEILQRVIDYILDLQVVLAEPAPGPPDGPHLPIQTAELTPELVISNDKRSFCH
Sbjct: 61 GTQLSQVEILQRVIDYILDLQVVLAEPAPGPPDGPHLPIQTAELTPELVISNDKRSFCH 119
>gi|31982933 inhibitor of DNA binding 2 [Homo sapiens]
Length = 134
Score = 84.3 bits (207), Expect = 2e-17
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 25/138 (18%)
Query: 1 MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPR 60
MKA SPVR + LS+ SL I+R + ++P+SLL +MN CYS+L+ELVP +P+
Sbjct: 1 MKAFSPVRSVRKN--SLSDHSLGISRSK---TPVDDPMSLLYNMNDCYSKLKELVPSIPQ 55
Query: 61 GTQLSQVEILQRVIDYILDLQVVL-AEPA--------PGPPDGPHLPIQT---------- 101
++S++EILQ VIDYILDLQ+ L + P PG P+ T
Sbjct: 56 NKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQNQASRTPLTTLNTDISILSL 115
Query: 102 -AELTPELVISNDKRSFC 118
A P ++SND ++ C
Sbjct: 116 QASEFPSELMSNDSKALC 133
>gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]
Length = 155
Score = 82.4 bits (202), Expect = 7e-17
Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 1 MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSL--------LDDMNHCYSRLR 52
+KA G E V CLSE+S+AI+R G G A P L L DMN CYSRL+
Sbjct: 19 LKAGKTASGAGEVVRCLSEQSVAISRCAG-GAGARLPALLDEQQVNVLLYDMNGCYSRLK 77
Query: 53 ELVPGVPRGTQLSQVEILQRVIDYILDLQVVL-AEPAPGPPDGPHLPIQ 100
ELVP +P+ ++S+VEILQ VIDYI DLQ+ L +E G P G LP++
Sbjct: 78 ELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRGLPVR 126
>gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]
Length = 149
Score = 82.4 bits (202), Expect = 7e-17
Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 1 MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSL--------LDDMNHCYSRLR 52
+KA G E V CLSE+S+AI+R G G A P L L DMN CYSRL+
Sbjct: 19 LKAGKTASGAGEVVRCLSEQSVAISRCAG-GAGARLPALLDEQQVNVLLYDMNGCYSRLK 77
Query: 53 ELVPGVPRGTQLSQVEILQRVIDYILDLQVVL-AEPAPGPPDGPHLPIQ 100
ELVP +P+ ++S+VEILQ VIDYI DLQ+ L +E G P G LP++
Sbjct: 78 ELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRGLPVR 126
>gi|4504573 inhibitor of DNA binding 4, dominant negative
helix-loop-helix protein [Homo sapiens]
Length = 161
Score = 82.4 bits (202), Expect = 7e-17
Identities = 61/135 (45%), Positives = 72/135 (53%), Gaps = 29/135 (21%)
Query: 1 MKALSPVR--------GCYE---AVCCLSER------------SLAIARGRGKGPAAEEP 37
MKA+SPVR GC A+ CL+E + A AR + AA+EP
Sbjct: 1 MKAVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEP 60
Query: 38 -LSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVL-AEPA----PGP 91
L L DMN CYSRLR LVP +P ++S+VEILQ VIDYILDLQ+ L PA P P
Sbjct: 61 ALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPP 120
Query: 92 PDGPHLPIQTAELTP 106
P PH P T P
Sbjct: 121 PAPPHHPAGTCPAAP 135
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 27 GRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAE 86
GR KG ++ + +N ++ LRE +P VP T+LS+++ L+ YI L VLA+
Sbjct: 93 GRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAK 152
Query: 87 PA-PGPPDGPHLPIQTAE 103
A G P+ ++ A+
Sbjct: 153 DAQSGDPEAFKAELKKAD 170
>gi|75677394 transcription factor 23 [Homo sapiens]
Length = 214
Score = 37.4 bits (85), Expect = 0.003
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 22 LAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQ 81
LA+ R A S + + + L+ +P VP T+LS++++L YI L
Sbjct: 70 LALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLT 129
Query: 82 VVLAEPAPGPPDGPHL 97
L PGP P L
Sbjct: 130 RTLGHELPGPAWPPFL 145
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 36.6 bits (83), Expect = 0.005
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 27 GRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAE 86
GR A S + + H + L+ +P VP T+LS++++L YI L L +
Sbjct: 48 GRPAAANAARERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQD 107
Query: 87 PAPGPPD 93
A P D
Sbjct: 108 DAEAPAD 114
>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 36.6 bits (83), Expect = 0.005
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 27 GRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAE 86
GR A S + + H + L+ +P VP T+LS++++L YI L L +
Sbjct: 48 GRPAAANAARERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQD 107
Query: 87 PAPGPPD 93
A P D
Sbjct: 108 DAEAPAD 114
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 36.6 bits (83), Expect = 0.005
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 30 KGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAE 86
+G A + +N ++ LRE +P VP T+LS+++ L+ YI L +LA+
Sbjct: 101 RGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
>gi|239754900 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 27 GRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAE 86
GR A S + + H + ++ +P VP T+LS++++L YI L L +
Sbjct: 48 GRPAAENAARERSRVQTLRHAFLEVQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQD 107
Query: 87 PAPGPPD 93
A P D
Sbjct: 108 DAEAPAD 114
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPG--PPDGPHLP 98
+N Y+RLR +PG +LS+VE L+ I YI LQ +L+ G PP LP
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPASRGLP 262
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPG--PPDGPHLP 98
+N Y+RLR +PG +LS+VE L+ I YI LQ +L+ G PP LP
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPASRGLP 262
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPG--PPDGPHLP 98
+N Y+RLR +PG +LS+VE L+ I YI LQ +L+ G PP LP
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPASRGLP 262
>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
Length = 173
Score = 35.0 bits (79), Expect = 0.013
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPG 90
+N Y+RLR+ +P +LS+VE L+ IDYI LQ +L A G
Sbjct: 89 VNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELLERQAWG 135
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 35.0 bits (79), Expect = 0.013
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 6 PVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLS 65
P +G A C S+R+ A AR R + + ++ +SRL+ +P VP T+LS
Sbjct: 96 PAKGS-AAECKQSQRNAANARERAR----------MRVLSKAFSRLKTSLPWVPPDTKLS 144
Query: 66 QVEILQRVIDYILDLQVVLAE 86
+++ L+ YI L+ +L E
Sbjct: 145 KLDTLRLASSYIAHLRQLLQE 165
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 35.0 bits (79), Expect = 0.013
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 CCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVI 74
C + R + AR R A E + +N + RLR +VP + +LS+ E LQ +
Sbjct: 29 CAGAGRLESAARRRLAANARER--RRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMAL 86
Query: 75 DYILDLQVVLAE 86
YI+ L +LAE
Sbjct: 87 SYIMALTRILAE 98
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPG--PPDGP 95
+NH + +LR ++P +LS+ E LQ YI L +L P+ G PP P
Sbjct: 175 LNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELLQTPSGGEQPPPPP 228
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 33.9 bits (76), Expect = 0.029
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)
Query: 43 DMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAE--------PAPGP--- 91
++N +++LR+L+P P +LS+ E L+ + YI L VL E A G
Sbjct: 17 NVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQQTGVAAQGNILG 76
Query: 92 --PDGPHLP 98
P GPHLP
Sbjct: 77 LFPQGPHLP 85
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 41 LDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVL 84
++ N ++ LR+L+P +P +LS++EIL+ I YI L VL
Sbjct: 90 VEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 41 LDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVL 84
++ N ++ LR+L+P +P +LS++EIL+ I YI L VL
Sbjct: 90 VEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 32.7 bits (73), Expect = 0.065
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLA 85
++ +SRL+ +P VP T+LS+++ L+ YI L+ +LA
Sbjct: 95 LSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILA 136
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 32.7 bits (73), Expect = 0.065
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLA 85
++ +SRL+ +P VP T+LS+++ L+ YI L+ +LA
Sbjct: 95 LSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILA 136
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 41 LDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVL 84
++ N ++ LR+L+P +P +LS++EIL+ I YI L VL
Sbjct: 88 VEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 131
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 18 SERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYI 77
SE L R + A + + + ++N LR ++P P T+L+++E L+ +YI
Sbjct: 82 SEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYI 141
Query: 78 LDLQVVLAEPAPGPPDG 94
L L G P G
Sbjct: 142 WALAETLRLADQGLPGG 158
>gi|116517330 factor in the germline alpha [Homo sapiens]
Length = 219
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 41 LDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVL 84
+ ++N ++RL+ LVP +P+ + S+V+IL+ +YI L +L
Sbjct: 78 IKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDLL 121
>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
Length = 236
Score = 30.8 bits (68), Expect = 0.25
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 44 MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPGPPDGPHLPIQTAE 103
+N ++ LRE VP ++S+VE L+ ++YI LQ +L E D Q
Sbjct: 134 VNLGFATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLDE-----HDAVSAAFQAGV 188
Query: 104 LTPELV--ISNDKRS 116
L+P + SND S
Sbjct: 189 LSPTISPNYSNDLNS 203
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 30.8 bits (68), Expect = 0.25
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 12 EAVCCLSERSLAIARGRGKGPAA----EEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQV 67
E + C R A A G A E + + +N + LR+ VP +LS+V
Sbjct: 30 ELLRCSRRRRPATAETGGGAAAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKV 89
Query: 68 EILQRVIDYILDLQVVLAE 86
E L+ ++YI LQ +LAE
Sbjct: 90 ETLRSAVEYIRALQRLLAE 108
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 30.8 bits (68), Expect = 0.25
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 43 DMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPGPPDGPHLP 98
++N ++ LR+L+P P +LS+ E+L+ + YI L +L + A GP P
Sbjct: 165 NVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPP 220
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 30.0 bits (66), Expect = 0.42
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 42 DDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDL-QVVLAEPAPG 90
+ +N ++ LR L+P P +LS++E L+ YI L V+LA A G
Sbjct: 89 NSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACG 138
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.139 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,609,491
Number of Sequences: 37866
Number of extensions: 273458
Number of successful extensions: 1295
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1229
Number of HSP's gapped (non-prelim): 77
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.