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Search of human proteins with 156071467
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156071467 arrestin 3, retinal (X-arrestin) [Homo sapiens]
(388 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156071467 arrestin 3, retinal (X-arrestin) [Homo sapiens] 768 0.0
gi|10880136 arrestin beta 1 isoform A [Homo sapiens] 464 e-131
gi|10880134 arrestin beta 1 isoform B [Homo sapiens] 447 e-125
gi|4757780 arrestin, beta 2 isoform 1 [Homo sapiens] 417 e-117
gi|116008178 S-arrestin [Homo sapiens] 384 e-107
gi|39812055 arrestin, beta 2 isoform 2 [Homo sapiens] 382 e-106
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 31 1.7
gi|61743954 AHNAK nucleoprotein isoform 1 [Homo sapiens] 31 1.7
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 31 2.2
gi|19923242 zinc finger protein 161 homolog [Homo sapiens] 30 4.8
gi|219689126 zinc finger protein 161 homolog [Homo sapiens] 30 4.8
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 29 8.3
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 29 8.3
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 29 8.3
gi|7662074 zinc finger and BTB domain containing 5 [Homo sapiens] 29 8.3
gi|190886442 arrestin domain containing 4 [Homo sapiens] 29 8.3
>gi|156071467 arrestin 3, retinal (X-arrestin) [Homo sapiens]
Length = 388
Score = 768 bits (1984), Expect = 0.0
Identities = 388/388 (100%), Positives = 388/388 (100%)
Query: 1 MSKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYG 60
MSKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYG
Sbjct: 1 MSKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYG 60
Query: 61 RDDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNL 120
RDDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNL
Sbjct: 61 RDDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNL 120
Query: 121 PCSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPS 180
PCSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPS
Sbjct: 121 PCSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPS 180
Query: 181 AQTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDVVL 240
AQTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDVVL
Sbjct: 181 AQTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDVVL 240
Query: 241 YSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLASS 300
YSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLASS
Sbjct: 241 YSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLASS 300
Query: 301 TIIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKPSHEAASS 360
TIIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKPSHEAASS
Sbjct: 301 TIIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKPSHEAASS 360
Query: 361 EDIVIEEFTRKGEEESQKAVEAEGDEGS 388
EDIVIEEFTRKGEEESQKAVEAEGDEGS
Sbjct: 361 EDIVIEEFTRKGEEESQKAVEAEGDEGS 388
>gi|10880136 arrestin beta 1 isoform A [Homo sapiens]
Length = 418
Score = 464 bits (1195), Expect = e-131
Identities = 231/404 (57%), Positives = 302/404 (74%), Gaps = 21/404 (5%)
Query: 2 SKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYGR 61
++VFKK S NGKL++YLGKRDFVDH+D V+P+DGVVLVDPEYLK R+++V LTCAFRYGR
Sbjct: 6 TRVFKKASPNGKLTVYLGKRDFVDHIDLVDPVDGVVLVDPEYLKERRVYVTLTCAFRYGR 65
Query: 62 DDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNLP 121
+DL+V+GLTFRKDL+V +Q P + PLT LQERL+ KLG++AYPFT ++ NLP
Sbjct: 66 EDLDVLGLTFRKDLFVANVQSFPPAPEDKK-PLTRLQERLIKKLGEHAYPFTFEIPPNLP 124
Query: 122 CSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPSA 181
CSVTLQPGPED GK CG+D+EVK+FCAEN EE + KR+ VRLV+RKVQ+AP GP P+A
Sbjct: 125 CSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTA 184
Query: 182 QTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDVVLY 241
+T R+FL+S +PL L+A +D+E++YHGEPISVNV + N TNK +KKIKISV Q D+ L+
Sbjct: 185 ETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLF 244
Query: 242 SLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLASST 301
+ +Y V ++E +TVA +S+F + + +TP LA + +KRGLALDGKLKHEDTNLASST
Sbjct: 245 NTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASST 304
Query: 302 IIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKPSHEA---- 357
++R G ++E+LGI+VSYKV+V L+VS GG+LGDL +SDV VELP L+HPKP E
Sbjct: 305 LLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKPKEEPPHRE 364
Query: 358 ----------------ASSEDIVIEEFTRKGEEESQKAVEAEGD 385
+ +DIV E+F R+ + + E E D
Sbjct: 365 VPENETPVDTNLIELDTNDDDIVFEDFARQRLKGMKDDKEEEED 408
>gi|10880134 arrestin beta 1 isoform B [Homo sapiens]
Length = 410
Score = 447 bits (1149), Expect = e-125
Identities = 226/404 (55%), Positives = 295/404 (73%), Gaps = 29/404 (7%)
Query: 2 SKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYGR 61
++VFKK S NGKL++YLGKRDFVDH+D V+P+DGVVLVDPEYLK R+++V LTCAFRYGR
Sbjct: 6 TRVFKKASPNGKLTVYLGKRDFVDHIDLVDPVDGVVLVDPEYLKERRVYVTLTCAFRYGR 65
Query: 62 DDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNLP 121
+DL+V+GLTFRKDL+V +Q P + PLT LQERL+ KLG++AYPFT ++ NLP
Sbjct: 66 EDLDVLGLTFRKDLFVANVQSFPPAPEDKK-PLTRLQERLIKKLGEHAYPFTFEIPPNLP 124
Query: 122 CSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPSA 181
CSVTLQPGPED GK CG+D+EVK+FCAEN EE + KR+ VRLV+RKVQ+AP GP P+A
Sbjct: 125 CSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTA 184
Query: 182 QTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDVVLY 241
+T R+FL+S +PL L+A +D+E++YHGEPISVNV + N TNK +KKIKISV Q D+ L+
Sbjct: 185 ETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLF 244
Query: 242 SLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLASST 301
+ +Y V ++E +TVA +S+F + + +TP LA + +KRGLALDGKLKHEDTNLASST
Sbjct: 245 NTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASST 304
Query: 302 IIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKPSHEA---- 357
++R G ++E+LGI+VSYKV+V L+VS GG DV VELP L+HPKP E
Sbjct: 305 LLREGANREILGIIVSYKVKVKLVVSRGG--------DVAVELPFTLMHPKPKEEPPHRE 356
Query: 358 ----------------ASSEDIVIEEFTRKGEEESQKAVEAEGD 385
+ +DIV E+F R+ + + E E D
Sbjct: 357 VPENETPVDTNLIELDTNDDDIVFEDFARQRLKGMKDDKEEEED 400
>gi|4757780 arrestin, beta 2 isoform 1 [Homo sapiens]
Length = 409
Score = 417 bits (1072), Expect = e-117
Identities = 206/352 (58%), Positives = 273/352 (77%), Gaps = 9/352 (2%)
Query: 2 SKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYGR 61
++VFKK+S N KL++YLGKRDFVDH+D V+P+DGVVLVDP+YLK RK+FV LTCAFRYGR
Sbjct: 7 TRVFKKSSPNCKLTVYLGKRDFVDHLDKVDPVDGVVLVDPDYLKDRKVFVTLTCAFRYGR 66
Query: 62 DDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNLP 121
+DL+V+GL+FRKDL++ T Q P + P+ P T LQ+RLL KLG +A+PF + NLP
Sbjct: 67 EDLDVLGLSFRKDLFIATYQAFPPVPNPPRPP-TRLQDRLLRKLGQHAHPFFFTIPQNLP 125
Query: 122 CSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPSA 181
CSVTLQPGPED GK CG+DFE+++FCA++ EE KR+ VRLV+RKVQFAP + GP PSA
Sbjct: 126 CSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKSHKRNSVRLVIRKVQFAPEKPGPQPSA 185
Query: 182 QTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDVVLY 241
+T R FL+S + L L+A +D+E++YHGEP++VNV + N + K +KKIK+SV Q D+ L+
Sbjct: 186 ETTRHFLMSDRSLHLEASLDKELYYHGEPLNVNVHVTNNSTKTVKKIKVSVRQYADICLF 245
Query: 242 SLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLASST 301
S +Y V E + V+ +S+F + + +TP+L+ + +KRGLALDGKLKHEDTNLASST
Sbjct: 246 STAQYKCPVAQLEQDDQVSPSSTFCKVYTITPLLSDNREKRGLALDGKLKHEDTNLASST 305
Query: 302 IIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKP 353
I++ G +KE+LGILVSY+V+V L+VS GG DV VELP VL+HPKP
Sbjct: 306 IVKEGANKEVLGILVSYRVKVKLVVSRGG--------DVSVELPFVLMHPKP 349
>gi|116008178 S-arrestin [Homo sapiens]
Length = 405
Score = 384 bits (986), Expect = e-107
Identities = 195/391 (49%), Positives = 277/391 (70%), Gaps = 14/391 (3%)
Query: 4 VFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYGRDD 63
+FKK S + ++IYLG RD++DHV V+P+DGVVLVDP+ +K +K++V LTCAFRYG++D
Sbjct: 16 IFKKISRDKSVTIYLGNRDYIDHVSQVQPVDGVVLVDPDLVKGKKVYVTLTCAFRYGQED 75
Query: 64 LEVIGLTFRKDLYVQTLQVVP--AESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNLP 121
++VIGLTFR+DLY +QV P +S+P T LQE LL KLG N YPF L LP
Sbjct: 76 IDVIGLTFRRDLYFSRVQVYPPVGAASTP----TKLQESLLKKLGSNTYPFLLTFPDYLP 131
Query: 122 CSVTLQPGPEDAGKPCGIDFEVKSFCAENP---EETVSKRDYVRLVVRKVQFAPPEAGPG 178
CSV LQP P+D+GK CG+DFEVK+F ++ E+ + K+ VRL++RKVQ AP E GP
Sbjct: 132 CSVMLQPAPQDSGKSCGVDFEVKAFATDSTDAEEDKIPKKSSVRLLIRKVQHAPLEMGPQ 191
Query: 179 PSAQTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDV 238
P A+ +F +S +PL L +++E+++HGEPI V V++ N T K +KKIK V+Q+ +V
Sbjct: 192 PRAEAAWQFFMSDKPLHLAVSLNKEIYFHGEPIPVTVTVTNNTEKTVKKIKAFVEQVANV 251
Query: 239 VLYSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLA 298
VLYS D Y K V ++E E V NS+ +++ + P+LA + ++RG+ALDGK+KHEDTNLA
Sbjct: 252 VLYSSDYYVKPVAMEEAQEKVPPNSTLTKTLTLLPLLANNRERRGIALDGKIKHEDTNLA 311
Query: 299 SSTIIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKPSHEAA 358
SSTII+ G+D+ +LGILVSY+++V L VS G LG+LT+S+V E+P L+HP+P A
Sbjct: 312 SSTIIKEGIDRTVLGILVSYQIKVKLTVS--GFLGELTSSEVATEVPFRLMHPQPEDPAK 369
Query: 359 SS---EDIVIEEFTRKGEEESQKAVEAEGDE 386
S ++V EEF R +++ +A E + D+
Sbjct: 370 ESYQDANLVFEEFARHNLKDAGEAEEGKRDK 400
>gi|39812055 arrestin, beta 2 isoform 2 [Homo sapiens]
Length = 394
Score = 382 bits (980), Expect = e-106
Identities = 193/352 (54%), Positives = 259/352 (73%), Gaps = 24/352 (6%)
Query: 2 SKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYGR 61
++VFKK+S N KL++YLGKRDFVDH+D V+P+ +FV LTCAFRYGR
Sbjct: 7 TRVFKKSSPNCKLTVYLGKRDFVDHLDKVDPV---------------VFVTLTCAFRYGR 51
Query: 62 DDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNLP 121
+DL+V+GL+FRKDL++ T Q P + P+ P T LQ+RLL KLG +A+PF + NLP
Sbjct: 52 EDLDVLGLSFRKDLFIATYQAFPPVPNPPRPP-TRLQDRLLRKLGQHAHPFFFTIPQNLP 110
Query: 122 CSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPSA 181
CSVTLQPGPED GK CG+DFE+++FCA++ EE KR+ VRLV+RKVQFAP + GP PSA
Sbjct: 111 CSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKSHKRNSVRLVIRKVQFAPEKPGPQPSA 170
Query: 182 QTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVIKKIKISVDQITDVVLY 241
+T R FL+S + L L+A +D+E++YHGEP++VNV + N + K +KKIK+SV Q D+ L+
Sbjct: 171 ETTRHFLMSDRSLHLEASLDKELYYHGEPLNVNVHVTNNSTKTVKKIKVSVRQYADICLF 230
Query: 242 SLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQKRGLALDGKLKHEDTNLASST 301
S +Y V E + V+ +S+F + + +TP+L+ + +KRGLALDGKLKHEDTNLASST
Sbjct: 231 STAQYKCPVAQLEQDDQVSPSSTFCKVYTITPLLSDNREKRGLALDGKLKHEDTNLASST 290
Query: 302 IIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIHPKP 353
I++ G +KE+LGILVSY+V+V L+VS GG DV VELP VL+HPKP
Sbjct: 291 IVKEGANKEVLGILVSYRVKVKLVVSRGG--------DVSVELPFVLMHPKP 334
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 31.2 bits (69), Expect = 1.7
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 75 LYVQTLQVVPAESSSPQGPLTVLQERLLH--KLGDNAYPFTLQMVTNLPCSVTLQPGPED 132
L +Q L V E + +T ER LH KLG + L + LPC TLQP P
Sbjct: 12 LMLQMLLFVAGEQGTQD--ITDASERGLHMQKLGSGSVQAALAELVALPCLFTLQPRPSA 69
Query: 133 A 133
A
Sbjct: 70 A 70
>gi|61743954 AHNAK nucleoprotein isoform 1 [Homo sapiens]
Length = 5890
Score = 31.2 bits (69), Expect = 1.7
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 289 KLKHEDTNLASSTIIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELP 345
K K D + + I P +D L G KV+ ++ VS + GDLT VGVE+P
Sbjct: 1909 KFKMPDMHFKAPKISMPDVDLHLKGP----KVKGDVDVSVPKLEGDLTGPSVGVEVP 1961
Score = 28.9 bits (63), Expect = 8.3
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 289 KLKHEDTNLASSTIIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELP 345
K K + + + I P +D L G KV+ + VS + GDLT VGVE+P
Sbjct: 1842 KFKMPEMHFKAPKISMPDVDLHLKGP----KVKGDADVSVPKLEGDLTGPSVGVEVP 1894
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 30.8 bits (68), Expect = 2.2
Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 1/103 (0%)
Query: 79 TLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNLPCSVTLQPGPEDAGKPCG 138
T V+P +S+P P V R + GD P Q P S QP E + P
Sbjct: 106 TSTVLPRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQDTPGGPASEPAQPPGERSADPPL 165
Query: 139 IDFEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPSA 181
E+ E P + PP+A PGP A
Sbjct: 166 PALELAQ-ATERPSADAAPPPRAPSEAASPCSDPPDAEPGPGA 207
>gi|19923242 zinc finger protein 161 homolog [Homo sapiens]
Length = 449
Score = 29.6 bits (65), Expect = 4.8
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 28/174 (16%)
Query: 235 ITDVVLYSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPI-------LAASCQKRGLALD 287
+++ + Y+ D + KT+F++ E + V + + A+C L
Sbjct: 7 MSETIKYNDDDH-KTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLF 65
Query: 288 GKLKHEDTNLASSTIIRPGMDKELLGILVSYKVRV-----NLMVSCGGILG--------- 333
KL+ + +++ +R + +E+L + + K+ V NLM+S G ILG
Sbjct: 66 KKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCS 125
Query: 334 ---DLTASDVG---VELPLVLIHPKPSHEAASSEDIVIEEFTRKGEEESQKAVE 381
D+++ D + L +P +AA ++D +EE + + S VE
Sbjct: 126 QKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVE 179
>gi|219689126 zinc finger protein 161 homolog [Homo sapiens]
Length = 449
Score = 29.6 bits (65), Expect = 4.8
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 28/174 (16%)
Query: 235 ITDVVLYSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPI-------LAASCQKRGLALD 287
+++ + Y+ D + KT+F++ E + V + + A+C L
Sbjct: 7 MSETIKYNDDDH-KTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLF 65
Query: 288 GKLKHEDTNLASSTIIRPGMDKELLGILVSYKVRV-----NLMVSCGGILG--------- 333
KL+ + +++ +R + +E+L + + K+ V NLM+S G ILG
Sbjct: 66 KKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCS 125
Query: 334 ---DLTASDVG---VELPLVLIHPKPSHEAASSEDIVIEEFTRKGEEESQKAVE 381
D+++ D + L +P +AA ++D +EE + + S VE
Sbjct: 126 QKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVE 179
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 28.9 bits (63), Expect = 8.3
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 113 TLQMVTNLPCSVTLQPGPE---DAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQ 169
TL + LP + PGPE DA + + A P S+R L KV+
Sbjct: 340 TLAFRSRLP--LLRSPGPEGTSDAARAPAPGLRDRDLRAAPPRPRPSQRPVSGLF--KVK 395
Query: 170 FAPPEAGPGPSA------QTIRRFLLSAQP 193
F P++GPG SA T R LL ++P
Sbjct: 396 FFVPQSGPGSSACEVAVPTTAGRELLGSEP 425
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 28.9 bits (63), Expect = 8.3
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 113 TLQMVTNLPCSVTLQPGPE---DAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQ 169
TL + LP + PGPE DA + + A P S+R L KV+
Sbjct: 340 TLAFRSRLP--LLRSPGPEGTSDAARAPAPGLRDRDLRAAPPRPRPSQRPVSGLF--KVK 395
Query: 170 FAPPEAGPGPSA------QTIRRFLLSAQP 193
F P++GPG SA T R LL ++P
Sbjct: 396 FFVPQSGPGSSACEVAVPTTAGRELLGSEP 425
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 28.9 bits (63), Expect = 8.3
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 113 TLQMVTNLPCSVTLQPGPE---DAGKPCGIDFEVKSFCAENPEETVSKRDYVRLVVRKVQ 169
TL + LP + PGPE DA + + A P S+R L KV+
Sbjct: 340 TLAFRSRLP--LLRSPGPEGTSDAARAPAPGLRDRDLRAAPPRPRPSQRPVSGLF--KVK 395
Query: 170 FAPPEAGPGPSA------QTIRRFLLSAQP 193
F P++GPG SA T R LL ++P
Sbjct: 396 FFVPQSGPGSSACEVAVPTTAGRELLGSEP 425
>gi|7662074 zinc finger and BTB domain containing 5 [Homo sapiens]
Length = 677
Score = 28.9 bits (63), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 142 EVKSFCAENPEETVSKRDYVRLVVRKVQFAPPE 174
E SF ENPE + +++++R+VV+ + PE
Sbjct: 306 EKSSFQCENPEVGLGEKEHMRVVVKSEPLSSPE 338
>gi|190886442 arrestin domain containing 4 [Homo sapiens]
Length = 418
Score = 28.9 bits (63), Expect = 8.3
Identities = 11/39 (28%), Positives = 25/39 (64%)
Query: 187 FLLSAQPLQLQAWMDREVHYHGEPISVNVSINNCTNKVI 225
+ ++ P+ L A ++R+ + +GE I + I NC++++I
Sbjct: 188 WFFTSGPVSLSAKIERKGYCNGEAIPIYAEIENCSSRLI 226
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,686,766
Number of Sequences: 37866
Number of extensions: 653899
Number of successful extensions: 1806
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1782
Number of HSP's gapped (non-prelim): 20
length of query: 388
length of database: 18,247,518
effective HSP length: 104
effective length of query: 284
effective length of database: 14,309,454
effective search space: 4063884936
effective search space used: 4063884936
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.