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Search of human proteins with 155030236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
(1337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 2812 0.0
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 2791 0.0
gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 93 2e-18
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 89 2e-17
gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 87 1e-16
gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 87 1e-16
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 86 2e-16
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 84 9e-16
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 79 2e-14
gi|52426743 cisplatin resistance-associated overexpressed protei... 79 3e-14
gi|19923485 cisplatin resistance-associated overexpressed protei... 79 3e-14
gi|160707881 formin 2 [Homo sapiens] 79 4e-14
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 78 6e-14
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 78 6e-14
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 78 6e-14
gi|11386183 WAS protein family, member 2 [Homo sapiens] 77 8e-14
gi|47132519 Ras association and pleckstrin homology domains 1 is... 77 1e-13
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 75 3e-13
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 75 4e-13
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 75 5e-13
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 74 9e-13
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 74 9e-13
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 74 1e-12
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 74 1e-12
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 74 1e-12
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 74 1e-12
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 74 1e-12
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 73 2e-12
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 72 3e-12
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 72 3e-12
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 2812 bits (7289), Expect = 0.0
Identities = 1337/1337 (100%), Positives = 1337/1337 (100%)
Query: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS
Sbjct: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
Query: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM
Sbjct: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
Query: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
Sbjct: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
Query: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
Sbjct: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
Query: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS
Sbjct: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
Query: 301 PSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMP 360
PSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMP
Sbjct: 301 PSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMP 360
Query: 361 DKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQE 420
DKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQE
Sbjct: 361 DKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQE 420
Query: 421 KAKAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDR 480
KAKAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDR
Sbjct: 421 KAKAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDR 480
Query: 481 LHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRIT 540
LHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRIT
Sbjct: 481 LHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRIT 540
Query: 541 VSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMP 600
VSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMP
Sbjct: 541 VSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMP 600
Query: 601 ENFCVKGLELFSLFLFRDILELYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVL 660
ENFCVKGLELFSLFLFRDILELYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVL
Sbjct: 601 ENFCVKGLELFSLFLFRDILELYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVL 660
Query: 661 SMHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQL 720
SMHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQL
Sbjct: 661 SMHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQL 720
Query: 721 DREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQK 780
DREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQK
Sbjct: 721 DREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQK 780
Query: 781 LAQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLM 840
LAQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLM
Sbjct: 781 LAQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLM 840
Query: 841 HLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHM 900
HLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHM
Sbjct: 841 HLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHM 900
Query: 901 RKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLA 960
RKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLA
Sbjct: 901 RKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLA 960
Query: 961 TYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSL 1020
TYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSL
Sbjct: 961 TYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSL 1020
Query: 1021 EEAKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVI 1080
EEAKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVI
Sbjct: 1021 EEAKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVI 1080
Query: 1081 FTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLL 1140
FTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLL
Sbjct: 1081 FTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLL 1140
Query: 1141 RSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYV 1200
RSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYV
Sbjct: 1141 RSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYV 1200
Query: 1201 HTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHART 1260
HTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHART
Sbjct: 1201 HTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHART 1260
Query: 1261 YTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRW 1320
YTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRW
Sbjct: 1261 YTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRW 1320
Query: 1321 EREHQEREPDETEDIKK 1337
EREHQEREPDETEDIKK
Sbjct: 1321 EREHQEREPDETEDIKK 1337
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 2791 bits (7236), Expect = 0.0
Identities = 1336/1374 (97%), Positives = 1336/1374 (97%), Gaps = 37/1374 (2%)
Query: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS
Sbjct: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
Query: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM
Sbjct: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
Query: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
Sbjct: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
Query: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
Sbjct: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
Query: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS
Sbjct: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
Query: 301 PSLERSYKKEYKRSGS-------------------------------------RSPSREK 323
PSLERSYKKEYKRSG RSPSREK
Sbjct: 301 PSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK 360
Query: 324 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 383
KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN
Sbjct: 361 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 420
Query: 384 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 443
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
Sbjct: 421 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 480
Query: 444 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 503
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
Sbjct: 481 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 540
Query: 504 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 563
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI
Sbjct: 541 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 600
Query: 564 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 623
FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY
Sbjct: 601 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 660
Query: 624 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 683
DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA
Sbjct: 661 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 720
Query: 684 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 743
NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA
Sbjct: 721 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 780
Query: 744 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 803
QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV
Sbjct: 781 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 840
Query: 804 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 863
ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP
Sbjct: 841 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 900
Query: 864 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 923
SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS
Sbjct: 901 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 960
Query: 924 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 983
RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR
Sbjct: 961 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 1020
Query: 984 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 1043
FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN
Sbjct: 1021 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 1080
Query: 1044 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1103
YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL
Sbjct: 1081 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1140
Query: 1104 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1163
GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA
Sbjct: 1141 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1200
Query: 1164 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1223
ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND
Sbjct: 1201 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1260
Query: 1224 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1283
PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA
Sbjct: 1261 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1320
Query: 1284 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1337
EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK
Sbjct: 1321 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1374
>gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens]
Length = 588
Score = 92.8 bits (229), Expect = 2e-18
Identities = 85/264 (32%), Positives = 106/264 (40%), Gaps = 36/264 (13%)
Query: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYS 173
PP FPP PP P P +P PP T P ++PPP +P PPP P PPG
Sbjct: 342 PPFFPPGAPPTHLPPPPFLP-PPPTVSTAPPLIPPPGIPITVPPPGFPP------PPG-- 392
Query: 174 HHNFPPPS-FNSFQNNPSSFLPSANNSSSPH----FRHLPPYPLPKAPS----------- 217
PPPS + ++ SS S + + P+ F HLP P PS
Sbjct: 393 ---APPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPG-SAPSWPSLVDTSKQWDYY 448
Query: 218 ERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR-TPS 276
RR +R + D R RD R ER R+ RER R D S + SD +R R
Sbjct: 449 ARREKDRDRERDRDRERDRDRDR-ERERT---RERERERDHSPTPSVFNSDEERYRYREY 504
Query: 277 RHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWS 336
R YER R + RHR+ R E +K S R S E R K + S
Sbjct: 505 AERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHR--RHKHKKS 562
Query: 337 DNQSSGKDKNYTSIKEKEPEETMP 360
GK+ E+E E P
Sbjct: 563 KRSKEGKEAGSEPAPEQESTEATP 586
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 89.4 bits (220), Expect = 2e-17
Identities = 104/369 (28%), Positives = 128/369 (34%), Gaps = 92/369 (24%)
Query: 19 PRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDF 78
P+G G G P A P R P P P P P P PP P
Sbjct: 198 PQGGRGRGRFPGAV---PGGDRFPGPAGPG------GPPPPFPAGQTPPRPPLGPPGPPG 248
Query: 79 VPFPPP----MPPSAQGP-----LPPCPI--------RPPFPNHQMRHPFPVPPCFPPMP 121
P PPP +PP GP PP P+ +PP P PVP PP
Sbjct: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPG 308
Query: 122 PPMPCPNNPP----VPGAPPGQGTFPF-MMPPPSMPHPPP----------PPVMPQQVN- 165
PP P PP P PPG P + PPP +P PPP P P N
Sbjct: 309 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNS 368
Query: 166 ---------------YQYPPGYSHHNFPPP--------------SFNSFQNNPSSFLPSA 196
Y PP Y ++ PP F N + SA
Sbjct: 369 GMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSA 428
Query: 197 -----NNSSSPHF--------RHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
+++S+ + + K ++ R + D H S G
Sbjct: 429 ISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYG-- 486
Query: 244 HRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSL 303
S RRER R D R SR +S + R+ RH Y R R RERERHR RD R
Sbjct: 487 --SGSRRERSRERDHSR--SREKSRRHKSRSRDRHDDYYRERSRERERHRDRD--RDRDR 540
Query: 304 ERSYKKEYK 312
ER ++EY+
Sbjct: 541 ERDREREYR 549
Score = 88.2 bits (217), Expect = 5e-17
Identities = 94/339 (27%), Positives = 122/339 (35%), Gaps = 66/339 (19%)
Query: 19 PRGRGGH------GARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFL 72
P G GG G P P P PP Q P + P P P
Sbjct: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLF 279
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIR--PPFPNHQMRHPFPVPPCFPPMPP-----PMP 125
P +P P P+PP GP PP P PP P + P P P FPP PP P+
Sbjct: 280 PGQPFGQPPLGPLPP---GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLT 336
Query: 126 CPNNPPVPGAPPGQG-----TFPFMMPPPSMPHPP------PPPVMPQQVNYQYPPGYSH 174
P +PG PPG P PPP+ P PPP P Y PP Y
Sbjct: 337 LAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP----YGRPPPYDR 392
Query: 175 HNFPPPS--------------FNSFQNNPSSFLPSA-----NNSSSPHFRH--------L 207
++ PP F N + SA +++S+ + +
Sbjct: 393 GDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAI 452
Query: 208 PPYPLPKAPSERRSPERLKHYDDHRH--RDHSHGRGERHRSLDRRERGRSPDR-RRQDSR 264
K ++ R + D H S+G G R R+ RS ++ RR SR
Sbjct: 453 SLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRERSRERDHSRSREKSRRHKSR 512
Query: 265 YRSDYD-----RGRTPSRHRSYERSRERERERHRHRDNR 298
R +D R R RHR +R R+RER+R R +R
Sbjct: 513 SRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR 551
>gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens]
Length = 520
Score = 86.7 bits (213), Expect = 1e-16
Identities = 79/253 (31%), Positives = 99/253 (39%), Gaps = 23/253 (9%)
Query: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPP--PPPVMPQQVNYQYPPG 171
PP FPP PP P P +P PP T P ++PPP P PP PPP + + + G
Sbjct: 283 PPFFPPGAPPTHLPPPPFLP-PPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSG 341
Query: 172 Y---SHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHY 228
Y S FP + N LP S+P + L RR +R +
Sbjct: 342 YDSRSARAFP------YGNVAFPHLP----GSAPSWPSLVDTSKQWDYYARREKDRDRER 391
Query: 229 DDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR-TPSRHRSYERSRER 287
D R RD R ER R+ RER R D S + SD +R R R YER R
Sbjct: 392 DRDRERDRDRDR-ERERT---RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRAS 447
Query: 288 ERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNY 347
+ RHR+ R E +K S R S E R K + S GK+
Sbjct: 448 REKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHR--RHKHKKSKRSKEGKEAGS 505
Query: 348 TSIKEKEPEETMP 360
E+E E P
Sbjct: 506 EPAPEQESTEATP 518
>gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens]
Length = 594
Score = 86.7 bits (213), Expect = 1e-16
Identities = 79/253 (31%), Positives = 99/253 (39%), Gaps = 23/253 (9%)
Query: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPP--PPPVMPQQVNYQYPPG 171
PP FPP PP P P +P PP T P ++PPP P PP PPP + + + G
Sbjct: 357 PPFFPPGAPPTHLPPPPFLP-PPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSG 415
Query: 172 Y---SHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHY 228
Y S FP + N LP S+P + L RR +R +
Sbjct: 416 YDSRSARAFP------YGNVAFPHLP----GSAPSWPSLVDTSKQWDYYARREKDRDRER 465
Query: 229 DDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR-TPSRHRSYERSRER 287
D R RD R ER R+ RER R D S + SD +R R R YER R
Sbjct: 466 DRDRERDRDRDR-ERERT---RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRAS 521
Query: 288 ERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNY 347
+ RHR+ R E +K S R S E R K + S GK+
Sbjct: 522 REKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHR--RHKHKKSKRSKEGKEAGS 579
Query: 348 TSIKEKEPEETMP 360
E+E E P
Sbjct: 580 EPAPEQESTEATP 592
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 85.9 bits (211), Expect = 2e-16
Identities = 88/314 (28%), Positives = 114/314 (36%), Gaps = 41/314 (13%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFP-VPPCF--PPMPPPMPCPNNPPVPGAP 136
PF PP +GP PP P F H F PP F PP P P
Sbjct: 513 PFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFD 572
Query: 137 PGQGTFPFMMPPPS------MPHPP----PPPVMPQQVNYQYPP-------------GYS 173
QG FP M PP MPHP PP PQ ++ PP G
Sbjct: 573 YPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPP 632
Query: 174 HHNFPPPSFNS---FQNNPSSFLPSANNSSSPHFRHLPP----YPLPKAPSERRSPERLK 226
H N PS + + P+ + ++ L P P P PSER
Sbjct: 633 HINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEA 692
Query: 227 HYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRE 286
Y H + G L R + RRR+ R+ PSR RS +SR
Sbjct: 693 FYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNS-----GPSRSRSRSKSRG 747
Query: 287 RERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKN 346
R R R ++ S S RS + RS SRS SR + R+R + R +QS + K+
Sbjct: 748 RSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSR---SQSRSRSKS 804
Query: 347 YTSIKEKEPEETMP 360
Y+ + + P
Sbjct: 805 YSPGRRRRSRSRSP 818
Score = 44.3 bits (103), Expect = 8e-04
Identities = 71/292 (24%), Positives = 91/292 (31%), Gaps = 63/292 (21%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIR--PP 101
P PP P P+T +S P +P ++ P+A GP P P PP
Sbjct: 357 PPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPP 416
Query: 102 FPNHQMRHPFPVPPC---FPPMPPPMPCPNNPPVPGAPP-------------------GQ 139
P PV P PP PP P P P PP GQ
Sbjct: 417 NKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGP-PHCPPWNNSHEGMWGEQRGDPGWNGQ 475
Query: 140 GTFP------------FMMPPPSMPHPPP-------PPV---MPQQVNYQYPPGYSHHNF 177
P F P S PP PP P +PP H F
Sbjct: 476 RDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQF 535
Query: 178 -PPPSFNSFQNNPSSFL----PSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHR 232
PP ++F P F+ P + P + H YP P+E P H+ HR
Sbjct: 536 NQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPH---HHPGHR 592
Query: 233 H-----RDHSHGRGERHRSL---DRRERGRSPDRRRQDSRYRSDYDRGRTPS 276
+H G +H G+ P RRQ + + D P+
Sbjct: 593 MPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPN 644
Score = 42.0 bits (97), Expect = 0.004
Identities = 36/111 (32%), Positives = 41/111 (36%), Gaps = 12/111 (10%)
Query: 82 PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGT 141
PPP PP A P P P P Q PP P P P A +G
Sbjct: 356 PPPAPPPAPAPAPAIP-----PTTQPDD--SKPPIQMPGSSEYEAPGGVQDPAAAGPRGP 408
Query: 142 FPFMMPPPSMP--HPPPPPVMP--QQVNYQYPPGYSHHNFPPPSFNSFQNN 188
P PP+ P P PV P QQ + PP Y HH PP + N+
Sbjct: 409 GPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPP-YPHHQGGPPHCPPWNNS 458
Score = 33.5 bits (75), Expect = 1.4
Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 130 PPVPGAPPGQGTFPFMMPPPSMPHPPPPPV-MPQQVNYQYPPGYSH-----------HNF 177
PP P PP P +PP + P PP+ MP Y+ P G H+
Sbjct: 355 PPPPAPPPAPAPAP-AIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQ 413
Query: 178 PPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211
PP+ + + P P PPYP
Sbjct: 414 IPPNKPPWFDQPHPVAPWGQQQPPEQ----PPYP 443
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 84.0 bits (206), Expect = 9e-16
Identities = 74/231 (32%), Positives = 97/231 (41%), Gaps = 38/231 (16%)
Query: 21 GRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVP 80
G+ G G APS R N + P PP P +T+ ++ A PPRP+
Sbjct: 120 GKTGQGPGSRAPSPRLPNKTISGPLIPPAS-----PRLGNTSEAHGAART-APPRPNVPA 173
Query: 81 FPPPMPPSAQGPLPP-----CPIR-----PPFPNHQMRHPFPVPP--CFPPMPPPMPCPN 128
PPP PP PLPP PI+ PP P + P PP C PP PPP P P
Sbjct: 174 PPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPT 233
Query: 129 NPPVPGAP--PGQGTFPFMMPPPSMPHPPPPPVMP-------------QQVNYQYPPGYS 173
PP+P A + P + P P PPP P++P + Q PP
Sbjct: 234 PPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPP 293
Query: 174 HHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPER 224
P S + + P+ LP N+SS PP P PK+PS + P++
Sbjct: 294 PPLPPYASCSPRASLPAPPLPGVNSSSETP----PPLP-PKSPSFQAPPQK 339
Score = 55.1 bits (131), Expect = 5e-07
Identities = 58/199 (29%), Positives = 68/199 (34%), Gaps = 70/199 (35%)
Query: 25 HGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPA------------PNFL 72
HGA +AP RP N+ P PP PP PS++ +P P
Sbjct: 159 HGAARTAPP-RP-NVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVA 216
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPC------------------PIRPPFP----------- 103
PP P P PPP PP PLPP PI PP P
Sbjct: 217 PPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLK 276
Query: 104 ------NHQMRHPFPVPPCFPPMPPPMPCPNN-----PPVPGA-------PPGQGTFPFM 145
+ P P PP PP+PP C PP+PG PP P
Sbjct: 277 AEPASPAQDAQEP-PAPP--PPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSF 333
Query: 146 MPPP------SMPHPPPPP 158
PP ++P PP PP
Sbjct: 334 QAPPQKAGAQALPAPPAPP 352
Score = 48.9 bits (115), Expect = 3e-05
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 35/134 (26%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSP-----APNFLPPRPDFVPFPPPM--------PPS-- 88
P PP PP P++ S+ AP LPP P +P PP P S
Sbjct: 224 PPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPA 283
Query: 89 --AQGPLPPCPIRPPFPNHQMRHPFPVPPCF---------PPMPPPMPCPNNPP------ 131
AQ P P P PP+ + R P PP PP+PP P PP
Sbjct: 284 QDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQ 343
Query: 132 ---VPGAPPGQGTF 142
P APPG F
Sbjct: 344 ALPAPPAPPGSQPF 357
Score = 36.2 bits (82), Expect = 0.22
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 110 PFPVPPCFPPMPPPMPCPNNPPVPGAPP 137
P P PP PP PPP+ P PP P APP
Sbjct: 4 PPPPPPPLPPPPPPLGAP-PPPPPSAPP 30
Score = 35.4 bits (80), Expect = 0.37
Identities = 21/41 (51%), Positives = 22/41 (53%), Gaps = 13/41 (31%)
Query: 112 PVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMP 152
PVPP P PPP+P P PP GAPP PPPS P
Sbjct: 2 PVPP---PPPPPLPPP--PPPLGAPP--------PPPPSAP 29
Score = 32.7 bits (73), Expect = 2.4
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 23/54 (42%)
Query: 79 VPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
+P PPP PP PLPP P PP P PPP P+ PPV
Sbjct: 1 MPVPPPPPP----PLPP----------------PPPPLGAPPPPP---PSAPPV 31
Score = 32.3 bits (72), Expect = 3.1
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 120 MPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYS 173
MP P P P PP+P PP P PPP P PP + P G S
Sbjct: 1 MPVPPPPP--PPLPPPPP-----PLGAPPPPPPSAPPVSTDTSSLRRADPKGRS 47
Score = 32.0 bits (71), Expect = 4.1
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 14/43 (32%)
Query: 119 PMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMP 161
P+PPP P PP+P PP P P PPPP P
Sbjct: 2 PVPPPPP----PPLPPPPP----------PLGAPPPPPPSAPP 30
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 79.3 bits (194), Expect = 2e-14
Identities = 58/160 (36%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 26 GARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPP-- 83
GA +AP+ P L PQ P PP P P +PPRP P PP
Sbjct: 221 GAYYAAPALDPALCVHLVPQLP------RPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMA 274
Query: 84 PMPP-SAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMP--PPM-PCPNNPPVPGAPPGQ 139
P+PP S P+PP P P P P P P P+P PPM P P PP+ PPG
Sbjct: 275 PVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGP 334
Query: 140 GTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPP 179
PP P PP PP+ P PPG PP
Sbjct: 335 PMARVPPGPPMAPLPPGPPMAP------LPPGPPMAPLPP 368
Score = 66.2 bits (160), Expect = 2e-10
Identities = 49/138 (35%), Positives = 57/138 (41%), Gaps = 21/138 (15%)
Query: 32 PSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNS----PAPNF--LPPRPDFVPFP--P 83
P P+ + P +PP+ PP AP S P P +PP P P P P
Sbjct: 250 PPMPPRPPMVPMPPRPPIAPM--PPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWP 307
Query: 84 PMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFP 143
PM P GP P P+ PP P P P PP PP P P PP+ PPG
Sbjct: 308 PMAPVPTGP-PMAPV-PPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPG----- 360
Query: 144 FMMPPPSMPHPPPPPVMP 161
PP P PP PP+ P
Sbjct: 361 ----PPMAPLPPGPPMAP 374
Score = 42.7 bits (99), Expect = 0.002
Identities = 26/79 (32%), Positives = 28/79 (35%)
Query: 55 PPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP 114
PP P P +PP P PP P + P PP PP P P P
Sbjct: 304 PPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPM 363
Query: 115 PCFPPMPPPMPCPNNPPVP 133
PP PP P P VP
Sbjct: 364 APLPPGPPMAPLPPRSHVP 382
Score = 32.3 bits (72), Expect = 3.1
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPP 95
P PP+ PP P P LPP P P PP PP A PLPP
Sbjct: 331 PPGPPMARV--PPGPPMAPLPPGPPMAPLPPGPPMAPLPPG-PPMA--PLPP 377
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 79.0 bits (193), Expect = 3e-14
Identities = 59/164 (35%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 214 KAPSERRSPERLKHYDDH-RHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRG 272
K E R ER + ++ R R E+ R+ DR R RS R R SR SD
Sbjct: 251 KQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR-TSD---- 305
Query: 273 RTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARW---- 328
R SR R ++RSR RER R R RD RRS S +RS +K RS R S+ + R +
Sbjct: 306 RRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRS 365
Query: 329 ---EEEKDRWS-DNQSSGKDKNYTSIKEKEPEETMPDKNEEEEE 368
+ E+DR S + + G D +S+K E+ D N E +E
Sbjct: 366 KSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKE 409
Score = 54.7 bits (130), Expect = 6e-07
Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 214 KAPSERRSPERLKHYDDHRHRDHSHGRG-ERHRSLDR-RERGRSPDRRRQDSRYRSDYDR 271
++ S R R R RDH R ER RS R R R RS DR + R RS DR
Sbjct: 292 RSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSR-DR 350
Query: 272 GRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEE 331
R+ SR R + R + R+R + R ++ KK +SGSR E E
Sbjct: 351 RRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNT---ES 407
Query: 332 KDRWSDNQSSGKDKNYTS 349
K+ + N+ +G ++ S
Sbjct: 408 KESDTKNEVNGTSEDIKS 425
Score = 53.1 bits (126), Expect = 2e-06
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 219 RRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRH 278
+RS R +H R S R + R R RS DRRR S RS+ + R+ SR
Sbjct: 291 KRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER-KHRSRSRD 349
Query: 279 RSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDN 338
R +SR+R+ ++HR R +R K++ KR S K +R ++ +D +++
Sbjct: 350 RRRSKSRDRK--SYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTES 407
Query: 339 QSS 341
+ S
Sbjct: 408 KES 410
Score = 30.8 bits (68), Expect = 9.1
Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 28/197 (14%)
Query: 277 RHRSYERSRERERE-RHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRW 335
+H Y + + E + + R P + KKE + REK+R R EE++R
Sbjct: 216 QHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQER----EEREKEREREREERERK 271
Query: 336 SDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGD 395
+ ++K +E+ ++ + RC+ S ++ S ++
Sbjct: 272 RRREEEEREKERARDRERRKRSRSRSRHSSRTSDR------RCSRSRDHKRSRSRER--- 322
Query: 396 STVVGTSRLRD-----LYDKFEEELGS-----RQEKAKAARPPWEPPKTKLDEDLESSSE 445
SR RD +D+ E + S R+ K++ + K++ E S E
Sbjct: 323 ----RRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKE 378
Query: 446 SECESDEDSTCSSSSDS 462
E +D S S S
Sbjct: 379 KEKRGSDDKKSSVKSGS 395
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 79.0 bits (193), Expect = 3e-14
Identities = 59/164 (35%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 214 KAPSERRSPERLKHYDDH-RHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRG 272
K E R ER + ++ R R E+ R+ DR R RS R R SR SD
Sbjct: 251 KQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR-TSD---- 305
Query: 273 RTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARW---- 328
R SR R ++RSR RER R R RD RRS S +RS +K RS R S+ + R +
Sbjct: 306 RRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRS 365
Query: 329 ---EEEKDRWS-DNQSSGKDKNYTSIKEKEPEETMPDKNEEEEE 368
+ E+DR S + + G D +S+K E+ D N E +E
Sbjct: 366 KSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKE 409
Score = 54.7 bits (130), Expect = 6e-07
Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 214 KAPSERRSPERLKHYDDHRHRDHSHGRG-ERHRSLDR-RERGRSPDRRRQDSRYRSDYDR 271
++ S R R R RDH R ER RS R R R RS DR + R RS DR
Sbjct: 292 RSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSR-DR 350
Query: 272 GRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEE 331
R+ SR R + R + R+R + R ++ KK +SGSR E E
Sbjct: 351 RRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNT---ES 407
Query: 332 KDRWSDNQSSGKDKNYTS 349
K+ + N+ +G ++ S
Sbjct: 408 KESDTKNEVNGTSEDIKS 425
Score = 53.1 bits (126), Expect = 2e-06
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 219 RRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRH 278
+RS R +H R S R + R R RS DRRR S RS+ + R+ SR
Sbjct: 291 KRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER-KHRSRSRD 349
Query: 279 RSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDN 338
R +SR+R+ ++HR R +R K++ KR S K +R ++ +D +++
Sbjct: 350 RRRSKSRDRK--SYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTES 407
Query: 339 QSS 341
+ S
Sbjct: 408 KES 410
Score = 30.8 bits (68), Expect = 9.1
Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 28/197 (14%)
Query: 277 RHRSYERSRERERE-RHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRW 335
+H Y + + E + + R P + KKE + REK+R R EE++R
Sbjct: 216 QHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQER----EEREKEREREREERERK 271
Query: 336 SDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGD 395
+ ++K +E+ ++ + RC+ S ++ S ++
Sbjct: 272 RRREEEEREKERARDRERRKRSRSRSRHSSRTSDR------RCSRSRDHKRSRSRER--- 322
Query: 396 STVVGTSRLRD-----LYDKFEEELGS-----RQEKAKAARPPWEPPKTKLDEDLESSSE 445
SR RD +D+ E + S R+ K++ + K++ E S E
Sbjct: 323 ----RRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKE 378
Query: 446 SECESDEDSTCSSSSDS 462
E +D S S S
Sbjct: 379 KEKRGSDDKKSSVKSGS 395
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 78.6 bits (192), Expect = 4e-14
Identities = 68/198 (34%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 44 PQQPPVQ-YQYEPPSAPSTTFSNSPAPNFLP-----PRPDF----VPFPPPMPPSAQGPL 93
PQ PP+Q + PP P + P P LP P P +P PPP+P +A P
Sbjct: 897 PQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPP 956
Query: 94 PPCP-----IRPPFPNHQMRHPFPVPPCFPPMPPPMPC---PNNPPVPGA---PPGQGTF 142
PP P + PP P + P P+P P PPP+P P PP+PGA PP
Sbjct: 957 PPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1016
Query: 143 PFMMPPPSMPHP--PPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSS 200
+ PPP +P PPPP +P PP PPP P LP A
Sbjct: 1017 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1076
Query: 201 SPHFRHL---PPYPLPKA 215
P PP PLP A
Sbjct: 1077 PPPLPGAGIPPPPPLPGA 1094
Score = 72.4 bits (176), Expect = 3e-12
Identities = 62/190 (32%), Positives = 74/190 (38%), Gaps = 23/190 (12%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF----LPPRPDF----VPFPPPMPPSAQGPLPP 95
P PP+ PP P P P +PP P +P PPP+P + P PP
Sbjct: 976 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1035
Query: 96 CPIR-----PPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPS 150
P PP P + P P+P P PPP+P PP P PG G + PPP
Sbjct: 1036 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL-PGAG----IPPPPP 1090
Query: 151 MPHP--PPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHL- 207
+P PPPP +P PP PPP P LP A P +
Sbjct: 1091 LPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVG 1150
Query: 208 --PPYPLPKA 215
PP PLP A
Sbjct: 1151 IPPPPPLPGA 1160
Score = 66.6 bits (161), Expect = 1e-10
Identities = 55/170 (32%), Positives = 67/170 (39%), Gaps = 33/170 (19%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF----LPPRPDF----VPFPPPMPPSAQGPLPP 95
P PP+ PP P P P +PP P +P PPP+P P PP
Sbjct: 1097 PPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPP 1156
Query: 96 CPIR-----PPFPNHQMRHPFPVPPCFPPMPPPMPC---PNNPPVPGAP-------PGQG 140
P PP P + P P+P P PPP+P P PP+PGA PG G
Sbjct: 1157 LPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMG 1216
Query: 141 TFPF---MMPPPSMPHPPP-------PPVMPQQVNYQYPPGYSHHNFPPP 180
P +PPP PPP PP++PQ + P PPP
Sbjct: 1217 IPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPP 1266
Score = 59.7 bits (143), Expect = 2e-08
Identities = 63/199 (31%), Positives = 73/199 (36%), Gaps = 38/199 (19%)
Query: 46 QPP----VQYQYEPPSAPSTTFSNS---PAPNFLP--------PRPDFVPFPPPMPPSAQ 90
QPP ++Q + S+ F NS P+P LP P VP PPP P
Sbjct: 828 QPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMT 887
Query: 91 GPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPF------ 144
P P P P P PP PPP+P PP P P G G P
Sbjct: 888 VPTLPSTAIPQPP------PLQGTEMLPPPPPPLPGAGIPPPPPLP-GAGILPLPPLPGA 940
Query: 145 -MMPPPSMPH---PPPPPVMPQQVNYQYP-PGYSHHNFPPPSFNSFQNNPSSFLPSANNS 199
+ PPP +P PPPPP+ + P PG PPP P LP A
Sbjct: 941 GIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIP--PPPPLPGAGIPPPPPLPGAGIP 998
Query: 200 SSPHFRHL---PPYPLPKA 215
P PP PLP A
Sbjct: 999 PPPPLPGAGIPPPPPLPGA 1017
Score = 45.4 bits (106), Expect = 4e-04
Identities = 46/151 (30%), Positives = 56/151 (37%), Gaps = 24/151 (15%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNF-- 71
PG G P GA P P R+ P PP+ PP P P P
Sbjct: 1125 PGAGIPPPPPLPGAGIPPPPPLP---RVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1181
Query: 72 --LPPRPDF----VPFPPPMPPSAQGPLPPCPIR--PPFPNHQMRHPFPVPPCFPPMPPP 123
+PP P +P PPP+P + P PP P PP P P+PP +PPP
Sbjct: 1182 VGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAP------PLPPPGTGIPPP 1235
Query: 124 MPCPNNPPVPGAPPGQGTFPF-----MMPPP 149
P + P G T P +PPP
Sbjct: 1236 PLLPVSGPPLLPQVGSSTLPTPQVCGFLPPP 1266
Score = 32.3 bits (72), Expect = 3.1
Identities = 29/117 (24%), Positives = 40/117 (34%), Gaps = 24/117 (20%)
Query: 120 MPPPMPCPNNPPVP-GAPPGQGT------------------FPFMMPPPSMPHPPPPPVM 160
+PP P PP P GA G T P S+ PPPPP +
Sbjct: 757 LPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSL 816
Query: 161 PQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPS 217
P H+ S +++ SS ++ N SP PP P ++ S
Sbjct: 817 LWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSP-----PPLPCTESSS 868
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
sapiens]
Length = 1125
Score = 77.8 bits (190), Expect = 6e-14
Identities = 92/297 (30%), Positives = 111/297 (37%), Gaps = 47/297 (15%)
Query: 24 GHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFS-NSPAPNFLPPRPDFVPF- 81
G P+AP+ P P PV AP +P+ L RP +P
Sbjct: 784 GSAVPPAAPTNLPTP-----PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 838
Query: 82 -PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM----PCPNNPPV--PG 134
PP MPP P P RP P+ R P P P F MPPP P P + P PG
Sbjct: 839 RPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-AMPPPHGMKGPFPPHGPFVRPG 897
Query: 135 APPGQGTFPFMMP-----------PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
PG G P P PP P P P PQQ Q PPP+
Sbjct: 898 GMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPT-- 954
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
Q P F N + F + RRS D R+ + + R
Sbjct: 955 --QQQPQQF----RNDNRQQFNS----GRDQERFGRRSFGNRVENDRERYGNRNDDRDNS 1004
Query: 244 HRSLDRRERG-RSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRR 299
+R DRRE G RSPDR R+R +R R S HR ER R+RE R ++ R
Sbjct: 1005 NR--DRREWGRRSPDR----DRHRDLEERNRRSSGHRDRERD-SRDRESRREKEEAR 1054
Score = 74.7 bits (182), Expect = 5e-13
Identities = 96/390 (24%), Positives = 144/390 (36%), Gaps = 86/390 (22%)
Query: 43 HPQQPPVQYQYEPPSAPSTTFSNSPAPNF---LPPRPDFVPF------PPPMPPSAQGPL 93
H PPV +PP+ T P P F +PP P PF P +PP P
Sbjct: 685 HQPGPPVVGALQPPAF--TPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPG 742
Query: 94 PPCPIRPPF---PNHQMRHPFP----------------------VPPCFP---PMPPPMP 125
PP PI PP P H P VPP P P PP
Sbjct: 743 PPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQ 802
Query: 126 CPNNPPVPGAPPGQ------------GTFPFMMP---PPSMPHP--------PPPPVMPQ 162
+ G PG G P ++P PP MP P PP P+ P
Sbjct: 803 PVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPH 862
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
++ PPG PPP P P P P P P P +R
Sbjct: 863 MMHRGPPPGPGGFAMPPPHGMKGPFPPHG--PFVRPGGMPGLGG--PGPGPGGPEDRDGR 918
Query: 223 ERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSD----YDRGRTPSR- 277
++ + + + + ++ + + P ++Q ++R+D ++ GR R
Sbjct: 919 QQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERF 978
Query: 278 -HRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREK--------KRARW 328
RS+ E +RER+ +R++ R S ++ + G RSP R++ +R+
Sbjct: 979 GRRSFGNRVENDRERYGNRNDDRDNS-----NRDRREWGRRSPDRDRHRDLEERNRRSSG 1033
Query: 329 EEEKDRWSDNQSSGKDKNYTSIKEKEPEET 358
+++R S ++ S ++K KEK PE T
Sbjct: 1034 HRDRERDSRDRESRREKEEARGKEK-PEVT 1062
Score = 53.5 bits (127), Expect = 1e-06
Identities = 70/270 (25%), Positives = 87/270 (32%), Gaps = 29/270 (10%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF-LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF 102
P QP Q PP T F F P+ V +A P PP
Sbjct: 238 PTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPA 297
Query: 103 PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQ 162
P + P P PPP P PG G M P H P+
Sbjct: 298 PTATV--PAAAAPAAASPPPPQ-------APFGFPGDG----MQQPAYTQHQNMDQFQPR 344
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
+ Q P HH P P P + P PP P S +
Sbjct: 345 MMGIQQDP--MHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 402
Query: 223 ERLK---HYDDHRHRDHSHGRGERHRSLDRRERGRS----PDRRRQDS-----RYRSDYD 270
E L H + +RH S +R+ R RS P RRR S R R
Sbjct: 403 EPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRS 462
Query: 271 RGRTPSRHRSYERSRERE-RERHRHRDNRR 299
R R+ R R RSR +E R+R + R+ R+
Sbjct: 463 RSRSRDRRRHSPRSRSQERRDREKERERRQ 492
Score = 52.4 bits (124), Expect = 3e-06
Identities = 48/150 (32%), Positives = 57/150 (38%), Gaps = 44/150 (29%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPP--MPPPMPCPNNPPVPGA-P 136
P P P+P P+PP P+ P P PP +PP P PPV GA
Sbjct: 657 PIPKPLPV----PVPPIPV-------------PAPITVPPPQVPPHQP---GPPVVGALQ 696
Query: 137 PGQGTFPFMMPPPSM-----PHPPPPPVMPQQVNYQY-PPGYSHHNFPPPSFNSFQNNPS 190
P T P +PPP P PPPPP + N + PPG+ PPP P
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI-----TPPV 751
Query: 191 SFLPSANNSSSPHFRHLPPYPLPKAPSERR 220
S P H PP +P S R
Sbjct: 752 SIPPP----------HTPPISIPNLVSGAR 771
Score = 52.0 bits (123), Expect = 4e-06
Identities = 46/127 (36%), Positives = 56/127 (44%), Gaps = 20/127 (15%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P++P + + S T SP P LP VP PP +P A +PP P P
Sbjct: 634 PKKPENEVAQNGGAETSHTEPVSPIPKPLP-----VPVPP-IPVPAPITVPP----PQVP 683
Query: 104 NHQMRHPFP---VPPCFPP---MPPPMPCPNNPPVPGAPP--GQGTFPFMMPPPSMPHP- 154
HQ P PP F P +PPP P PP P PP G P +PP +P P
Sbjct: 684 PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLP-PG 742
Query: 155 PPPPVMP 161
PPPP+ P
Sbjct: 743 PPPPITP 749
Score = 47.8 bits (112), Expect = 7e-05
Identities = 56/210 (26%), Positives = 73/210 (34%), Gaps = 22/210 (10%)
Query: 56 PSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPP 115
P AP+ T + AP P P PF P Q P + HQ F P
Sbjct: 295 PPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQ---------PAYTQHQNMDQFQ-PR 344
Query: 116 CFPPMPPPMPCPNNPPVPGAPPGQGTFPFM-MPPPSMPH-PPPPPVM-PQQVNYQ----- 167
PM P G PG G P PP + P PP PPV P Q ++Q
Sbjct: 345 MMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEP 404
Query: 168 --YPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS--PHFRHLPPYPLPKAPSERRSPE 223
P P + + S S + S+S P R + RRS
Sbjct: 405 LTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRS 464
Query: 224 RLKHYDDHRHRDHSHGRGERHRSLDRRERG 253
R + H R S R +R + +RR++G
Sbjct: 465 RSRDRRRHSPRSRSQERRDREKERERRQKG 494
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P R G P P +PQ PQQP Q Q +PP S P P
Sbjct: 907 PGPGGPEDRDGRQQPPQQPQQQPQPQA---PQQPQQQQQQQPPP------SQQPPPTQQQ 957
Query: 74 PR 75
P+
Sbjct: 958 PQ 959
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
sapiens]
Length = 1132
Score = 77.8 bits (190), Expect = 6e-14
Identities = 92/297 (30%), Positives = 111/297 (37%), Gaps = 47/297 (15%)
Query: 24 GHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFS-NSPAPNFLPPRPDFVPF- 81
G P+AP+ P P PV AP +P+ L RP +P
Sbjct: 791 GSAVPPAAPTNLPTP-----PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 845
Query: 82 -PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM----PCPNNPPV--PG 134
PP MPP P P RP P+ R P P P F MPPP P P + P PG
Sbjct: 846 RPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-AMPPPHGMKGPFPPHGPFVRPG 904
Query: 135 APPGQGTFPFMMP-----------PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
PG G P P PP P P P PQQ Q PPP+
Sbjct: 905 GMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPT-- 961
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
Q P F N + F + RRS D R+ + + R
Sbjct: 962 --QQQPQQF----RNDNRQQFNS----GRDQERFGRRSFGNRVENDRERYGNRNDDRDNS 1011
Query: 244 HRSLDRRERG-RSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRR 299
+R DRRE G RSPDR R+R +R R S HR ER R+RE R ++ R
Sbjct: 1012 NR--DRREWGRRSPDR----DRHRDLEERNRRSSGHRDRERD-SRDRESRREKEEAR 1061
Score = 68.2 bits (165), Expect = 5e-11
Identities = 97/412 (23%), Positives = 147/412 (35%), Gaps = 108/412 (26%)
Query: 43 HPQQPPVQYQYEPPSAPSTTFSNSPAPNF---LPPRPDFVPF------PPPMPPSAQGPL 93
H PPV +PP+ T P P F +PP P PF P +PP P
Sbjct: 670 HQPGPPVVGALQPPAF--TPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPG 727
Query: 94 PPCPIRPPF---PNH----------------------QMRHPFP---------------- 112
PP PI PP P H + +P P
Sbjct: 728 PPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSV 787
Query: 113 ------VPPCFP---PMPPPMPCPNNPPVPGAPPGQ------------GTFPFMMP---P 148
VPP P P PP + G PG G P ++P P
Sbjct: 788 KMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRP 847
Query: 149 PSMPHP--------PPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSS 200
P MP P PP P+ P ++ PPG PPP P P
Sbjct: 848 PGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHG--PFVRPGG 905
Query: 201 SPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRR 260
P P P P P +R ++ + + + + ++ + + P ++
Sbjct: 906 MPGLGG--PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQ 963
Query: 261 QDSRYRSD----YDRGRTPSR--HRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRS 314
Q ++R+D ++ GR R RS+ E +RER+ +R++ R S ++ +
Sbjct: 964 QPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNS-----NRDRREW 1018
Query: 315 GSRSPSREK--------KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEET 358
G RSP R++ +R+ +++R S ++ S ++K KEK PE T
Sbjct: 1019 GRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK-PEVT 1069
Score = 57.0 bits (136), Expect = 1e-07
Identities = 45/126 (35%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P++P + + S T SP P LP VP PP +P A +PP P P
Sbjct: 619 PKKPENEVAQNGGAETSHTEPVSPIPKPLP-----VPVPP-IPVPAPITVPP----PQVP 668
Query: 104 NHQMRHPFP---VPPCFPP---MPPPMPCPNNPPVPGAPP--GQGTFPFMMPPPSMPHPP 155
HQ P PP F P +PPP P PP P PP G P +PP +P P
Sbjct: 669 PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGP 728
Query: 156 PPPVMP 161
PPP+ P
Sbjct: 729 PPPITP 734
Score = 53.5 bits (127), Expect = 1e-06
Identities = 70/270 (25%), Positives = 87/270 (32%), Gaps = 29/270 (10%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF-LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF 102
P QP Q PP T F F P+ V +A P PP
Sbjct: 223 PTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPA 282
Query: 103 PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQ 162
P + P P PPP P PG G M P H P+
Sbjct: 283 PTATV--PAAAAPAAASPPPPQ-------APFGFPGDG----MQQPAYTQHQNMDQFQPR 329
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
+ Q P HH P P P + P PP P S +
Sbjct: 330 MMGIQQDP--MHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 387
Query: 223 ERLK---HYDDHRHRDHSHGRGERHRSLDRRERGRS----PDRRRQDS-----RYRSDYD 270
E L H + +RH S +R+ R RS P RRR S R R
Sbjct: 388 EPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRS 447
Query: 271 RGRTPSRHRSYERSRERE-RERHRHRDNRR 299
R R+ R R RSR +E R+R + R+ R+
Sbjct: 448 RSRSRDRRRHSPRSRSQERRDREKERERRQ 477
Score = 51.6 bits (122), Expect = 5e-06
Identities = 39/110 (35%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPP--MPPPMPCPNNPPVPGA-P 136
P P P+P P+PP P+ P P PP +PP P PPV GA
Sbjct: 642 PIPKPLPV----PVPPIPV-------------PAPITVPPPQVPPHQP---GPPVVGALQ 681
Query: 137 PGQGTFPFMMPPPSM-----PHPPPPPVMPQQVNYQY-PPGYSHHNFPPP 180
P T P +PPP P PPPPP + N + PPG+ PPP
Sbjct: 682 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 731
Score = 47.8 bits (112), Expect = 7e-05
Identities = 56/210 (26%), Positives = 73/210 (34%), Gaps = 22/210 (10%)
Query: 56 PSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPP 115
P AP+ T + AP P P PF P Q P + HQ F P
Sbjct: 280 PPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQ---------PAYTQHQNMDQFQ-PR 329
Query: 116 CFPPMPPPMPCPNNPPVPGAPPGQGTFPFM-MPPPSMPH-PPPPPVM-PQQVNYQ----- 167
PM P G PG G P PP + P PP PPV P Q ++Q
Sbjct: 330 MMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEP 389
Query: 168 --YPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS--PHFRHLPPYPLPKAPSERRSPE 223
P P + + S S + S+S P R + RRS
Sbjct: 390 LTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRS 449
Query: 224 RLKHYDDHRHRDHSHGRGERHRSLDRRERG 253
R + H R S R +R + +RR++G
Sbjct: 450 RSRDRRRHSPRSRSQERRDREKERERRQKG 479
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P R G P P +PQ PQQP Q Q +PP S P P
Sbjct: 914 PGPGGPEDRDGRQQPPQQPQQQPQPQA---PQQPQQQQQQQPPP------SQQPPPTQQQ 964
Query: 74 PR 75
P+
Sbjct: 965 PQ 966
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 77.8 bits (190), Expect = 6e-14
Identities = 92/297 (30%), Positives = 111/297 (37%), Gaps = 47/297 (15%)
Query: 24 GHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFS-NSPAPNFLPPRPDFVPF- 81
G P+AP+ P P PV AP +P+ L RP +P
Sbjct: 806 GSAVPPAAPTNLPTP-----PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 860
Query: 82 -PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM----PCPNNPPV--PG 134
PP MPP P P RP P+ R P P P F MPPP P P + P PG
Sbjct: 861 RPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-AMPPPHGMKGPFPPHGPFVRPG 919
Query: 135 APPGQGTFPFMMP-----------PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
PG G P P PP P P P PQQ Q PPP+
Sbjct: 920 GMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPT-- 976
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
Q P F N + F + RRS D R+ + + R
Sbjct: 977 --QQQPQQF----RNDNRQQFNS----GRDQERFGRRSFGNRVENDRERYGNRNDDRDNS 1026
Query: 244 HRSLDRRERG-RSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRR 299
+R DRRE G RSPDR R+R +R R S HR ER R+RE R ++ R
Sbjct: 1027 NR--DRREWGRRSPDR----DRHRDLEERNRRSSGHRDRERD-SRDRESRREKEEAR 1076
Score = 68.2 bits (165), Expect = 5e-11
Identities = 97/412 (23%), Positives = 147/412 (35%), Gaps = 108/412 (26%)
Query: 43 HPQQPPVQYQYEPPSAPSTTFSNSPAPNF---LPPRPDFVPF------PPPMPPSAQGPL 93
H PPV +PP+ T P P F +PP P PF P +PP P
Sbjct: 685 HQPGPPVVGALQPPAF--TPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPG 742
Query: 94 PPCPIRPPF---PNH----------------------QMRHPFP---------------- 112
PP PI PP P H + +P P
Sbjct: 743 PPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSV 802
Query: 113 ------VPPCFP---PMPPPMPCPNNPPVPGAPPGQ------------GTFPFMMP---P 148
VPP P P PP + G PG G P ++P P
Sbjct: 803 KMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRP 862
Query: 149 PSMPHP--------PPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSS 200
P MP P PP P+ P ++ PPG PPP P P
Sbjct: 863 PGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHG--PFVRPGG 920
Query: 201 SPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRR 260
P P P P P +R ++ + + + + ++ + + P ++
Sbjct: 921 MPGLGG--PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQ 978
Query: 261 QDSRYRSD----YDRGRTPSR--HRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRS 314
Q ++R+D ++ GR R RS+ E +RER+ +R++ R S ++ +
Sbjct: 979 QPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNS-----NRDRREW 1033
Query: 315 GSRSPSREK--------KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEET 358
G RSP R++ +R+ +++R S ++ S ++K KEK PE T
Sbjct: 1034 GRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK-PEVT 1084
Score = 57.0 bits (136), Expect = 1e-07
Identities = 45/126 (35%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P++P + + S T SP P LP VP PP +P A +PP P P
Sbjct: 634 PKKPENEVAQNGGAETSHTEPVSPIPKPLP-----VPVPP-IPVPAPITVPP----PQVP 683
Query: 104 NHQMRHPFP---VPPCFPP---MPPPMPCPNNPPVPGAPP--GQGTFPFMMPPPSMPHPP 155
HQ P PP F P +PPP P PP P PP G P +PP +P P
Sbjct: 684 PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGP 743
Query: 156 PPPVMP 161
PPP+ P
Sbjct: 744 PPPITP 749
Score = 53.5 bits (127), Expect = 1e-06
Identities = 70/270 (25%), Positives = 87/270 (32%), Gaps = 29/270 (10%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF-LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF 102
P QP Q PP T F F P+ V +A P PP
Sbjct: 238 PTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPA 297
Query: 103 PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQ 162
P + P P PPP P PG G M P H P+
Sbjct: 298 PTATV--PAAAAPAAASPPPPQ-------APFGFPGDG----MQQPAYTQHQNMDQFQPR 344
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
+ Q P HH P P P + P PP P S +
Sbjct: 345 MMGIQQDP--MHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 402
Query: 223 ERLK---HYDDHRHRDHSHGRGERHRSLDRRERGRS----PDRRRQDS-----RYRSDYD 270
E L H + +RH S +R+ R RS P RRR S R R
Sbjct: 403 EPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRS 462
Query: 271 RGRTPSRHRSYERSRERE-RERHRHRDNRR 299
R R+ R R RSR +E R+R + R+ R+
Sbjct: 463 RSRSRDRRRHSPRSRSQERRDREKERERRQ 492
Score = 51.6 bits (122), Expect = 5e-06
Identities = 39/110 (35%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPP--MPPPMPCPNNPPVPGA-P 136
P P P+P P+PP P+ P P PP +PP P PPV GA
Sbjct: 657 PIPKPLPV----PVPPIPV-------------PAPITVPPPQVPPHQP---GPPVVGALQ 696
Query: 137 PGQGTFPFMMPPPSM-----PHPPPPPVMPQQVNYQY-PPGYSHHNFPPP 180
P T P +PPP P PPPPP + N + PPG+ PPP
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 746
Score = 47.8 bits (112), Expect = 7e-05
Identities = 56/210 (26%), Positives = 73/210 (34%), Gaps = 22/210 (10%)
Query: 56 PSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPP 115
P AP+ T + AP P P PF P Q P + HQ F P
Sbjct: 295 PPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQ---------PAYTQHQNMDQFQ-PR 344
Query: 116 CFPPMPPPMPCPNNPPVPGAPPGQGTFPFM-MPPPSMPH-PPPPPVM-PQQVNYQ----- 167
PM P G PG G P PP + P PP PPV P Q ++Q
Sbjct: 345 MMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEP 404
Query: 168 --YPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS--PHFRHLPPYPLPKAPSERRSPE 223
P P + + S S + S+S P R + RRS
Sbjct: 405 LTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRS 464
Query: 224 RLKHYDDHRHRDHSHGRGERHRSLDRRERG 253
R + H R S R +R + +RR++G
Sbjct: 465 RSRDRRRHSPRSRSQERRDREKERERRQKG 494
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P R G P P +PQ PQQP Q Q +PP S P P
Sbjct: 929 PGPGGPEDRDGRQQPPQQPQQQPQPQA---PQQPQQQQQQQPPP------SQQPPPTQQQ 979
Query: 74 PR 75
P+
Sbjct: 980 PQ 981
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 77.4 bits (189), Expect = 8e-14
Identities = 55/160 (34%), Positives = 63/160 (39%), Gaps = 9/160 (5%)
Query: 36 PQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGP--L 93
P+ ++ P PP P P F+ PAP PP P + PPP PP G
Sbjct: 289 PKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPP--PPPPPMIGIPPPPPPVGFGSPGT 346
Query: 94 PPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPH 153
PP P P FP H F PP PP PP P PP P + P G P PPP
Sbjct: 347 PPPPSPPSFPPHP---DFAAPPP-PPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG- 401
Query: 154 PPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFL 193
PPPPP PP S P S + + S L
Sbjct: 402 PPPPPFTGADGQPAIPPPLSDTTKPKSSLPAVSDARSDLL 441
Score = 62.4 bits (150), Expect = 3e-09
Identities = 57/181 (31%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 29 PSAPSFRPQNLR---LLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPM 85
P+ S+ N R L P++ V PP AP P P F PP P PPP
Sbjct: 271 PAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPP-----PAPPPP 325
Query: 86 PPSAQG-PLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPF 144
PP G P PP P+ P P P PP FPP P P PP
Sbjct: 326 PPPMIGIPPPPPPVGFGSPGTP---PPPSPPSFPPHPD-FAAPPPPP------------- 368
Query: 145 MMPPPSMPHP--PPPPV-MPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS 201
PPP+ +P PPPP+ P PP PPP F P + P ++++
Sbjct: 369 --PPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQP-AIPPPLSDTTK 425
Query: 202 P 202
P
Sbjct: 426 P 426
Score = 60.1 bits (144), Expect = 1e-08
Identities = 48/167 (28%), Positives = 56/167 (33%), Gaps = 34/167 (20%)
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMR----------------HPFPVPPC 116
PP P P P ++ LPP P +P R HP P PP
Sbjct: 247 PPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPL 306
Query: 117 FPP-------MPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYP 169
P PPP P P PP+ G PP P P P PP PP P ++ P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPP--PVGFGSPGTPPPPSPPSFPPHPDFAAP 364
Query: 170 PGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
P PPP + P L + P PP P P P
Sbjct: 365 PPP-----PPPPAADYPTLPPPPLSQPTGGAPPP----PPPPPPPGP 402
Score = 60.1 bits (144), Expect = 1e-08
Identities = 50/147 (34%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
P G P G A P AP P + + P PPV + P + S P P+F
Sbjct: 304 PPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA 363
Query: 74 PRPDFVPFPPPMPPSAQGP-LPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
P PPP PP+A P LPP P+ P PP PP PPP P P PP
Sbjct: 364 PP------PPPPPPAADYPTLPPPPLSQPTGG--------APP--PPPPPPPPGPPPPPF 407
Query: 133 PGAPPGQGTFPFMMPPPSMPHPPPPPV 159
GA GQ P + + P P V
Sbjct: 408 TGA-DGQPAIPPPLSDTTKPKSSLPAV 433
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 76.6 bits (187), Expect = 1e-13
Identities = 67/213 (31%), Positives = 79/213 (37%), Gaps = 69/213 (32%)
Query: 53 YEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP-----SAQGPLPPCPIRPPFPN--- 104
++PP+ P S S P L P VP PPP PP SA L P P P P
Sbjct: 684 FKPPTPPVMQ-SQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSA 742
Query: 105 -------HQMRHPFPVPPCFPPMPPPMPCPNNP--------------------------- 130
HQ++H V P PP PPP+P P P
Sbjct: 743 PPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAA 802
Query: 131 ---PVPGAPPG--QGTFPFMMPPPSMPHPP---PPPVMPQQVNYQYPPGYSHHNFPPPSF 182
P P PP Q FP PPS P PP PPP +P+Q ++ PPPS
Sbjct: 803 PPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAK--------PPPS- 853
Query: 183 NSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKA 215
P S +PS + F PP P P A
Sbjct: 854 ------PLSPVPSVVKQIASQF---PPPPTPPA 877
Score = 63.2 bits (152), Expect = 2e-09
Identities = 67/210 (31%), Positives = 78/210 (37%), Gaps = 43/210 (20%)
Query: 44 PQQPPVQYQYEPPSAPST-TFSNSPAPNFLPPRPDFVPF------PPPMPPSAQG-PLPP 95
P PPV PP+ P +F P P+ L P P V PPP PP+ + PL P
Sbjct: 828 PPTPPVPVP--PPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKP 885
Query: 96 CP--IRPPFPNHQMRHP-------------FPVPP-----CFPPMPPPMPCPNNPPVPGA 135
P + P P P FP PP FPP PPP P P PP P
Sbjct: 886 VPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPP-PPPSPVPAPPPPP-- 942
Query: 136 PPGQGTFPFMMPPP-------SMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNN 188
PP P P S P PP PQ+ + + H P P S +
Sbjct: 943 PPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEH--PEPKRPSVDSL 1000
Query: 189 PSSFLPSANNSSSPHFRHLPPYPLPKAPSE 218
S F P A S SP LPP P P +
Sbjct: 1001 VSKFTPPA-ESGSPSKETLPPPAAPPKPGK 1029
Score = 60.1 bits (144), Expect = 1e-08
Identities = 67/217 (30%), Positives = 83/217 (38%), Gaps = 41/217 (18%)
Query: 29 PSAPSFR--PQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPM- 85
PS P F P L++ Q Q PP+ P +P P PP+P V P P
Sbjct: 735 PSLPQFSAPPPPLKIHQVQHIT---QVAPPTPPPPPPIPAPLPPQAPPKP-LVTIPAPTS 790
Query: 86 ------------PPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFP-PMPPP-MP-----C 126
PP+ P+PP +P FP + P PP P P+PPP +P C
Sbjct: 791 TKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIP---PSPPTPPVPVPPPTLPKQQSFC 847
Query: 127 PNNPPVPGAPPGQ------GTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGY-SHHNFPP 179
PP P +P FP PP+M P PV P V Q PP + + P
Sbjct: 848 AKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPV-PANVAPQSPPAVKAKPKWQP 906
Query: 180 PSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
S PS P SS F PP P+P P
Sbjct: 907 SSIPV----PSPDFPPPPPESSLVFPPPPPSPVPAPP 939
Score = 60.1 bits (144), Expect = 1e-08
Identities = 58/189 (30%), Positives = 71/189 (37%), Gaps = 13/189 (6%)
Query: 55 PPSAPSTTFSNSPAPNFLPPRPDF--VPFPPPMPPSAQG---PLPPCPIRP-PFPNHQMR 108
PP P+ PA +++PP P VP PPP P Q PP P+ P P Q+
Sbjct: 808 PPVPPAKKQPAFPA-SYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIA 866
Query: 109 HPFPVPPCFPPMP--PPMPCPNNPPVPGAPPGQGTFPFMMP---PPSMPHPPPPPVMPQQ 163
FP PP P M P P P N P +PP P P P P PPPP
Sbjct: 867 SQFPPPPTPPAMESQPLKPVPANV-APQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSL 925
Query: 164 VNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPE 223
V PP PPP + S P S + P P P+ S +S
Sbjct: 926 VFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSS 985
Query: 224 RLKHYDDHR 232
+H + R
Sbjct: 986 GAEHPEPKR 994
Score = 55.8 bits (133), Expect = 3e-07
Identities = 54/200 (27%), Positives = 64/200 (32%), Gaps = 42/200 (21%)
Query: 52 QYEPPSAPSTTFSNSPAPNFLPP---RPDFV----------PFPPPMPPSAQGPLPPCPI 98
Q E S N P + +PP +P V P PPP PP P PP P
Sbjct: 586 QLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPP 645
Query: 99 RPPFPNHQMRHPFPVPPCF---------------------PPMPPPMPCPNNPPVPGAPP 137
PP P+ P F PP PP M + P PP
Sbjct: 646 PPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPP 705
Query: 138 GQGTFPFMMPPPSMPHPPPPP--VMPQQVNYQYPPGYSHHNFPPPSFNSFQ-NNPSSFLP 194
++PPP P PPP P M Q P + PPP Q + + P
Sbjct: 706 NG-----VVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAP 760
Query: 195 SANNSSSPHFRHLPPYPLPK 214
P LPP PK
Sbjct: 761 PTPPPPPPIPAPLPPQAPPK 780
Score = 50.1 bits (118), Expect = 1e-05
Identities = 48/161 (29%), Positives = 57/161 (35%), Gaps = 36/161 (22%)
Query: 92 PLPPCP-IRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVP--GAPPGQGTFPFMMPP 148
PL P P I P+ Q P P PP PP PPP P P PP+P AP P +
Sbjct: 608 PLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKY 667
Query: 149 PSMPH-------------PPPPPVMPQQ---------VNYQYPPGYSHHNFPPPSFNSFQ 186
++ PP PPVM Q N PP P P Q
Sbjct: 668 STITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQ 727
Query: 187 NNPSSFLPSANNSSSP-------HFRHL----PPYPLPKAP 216
P+ PS S+P +H+ PP P P P
Sbjct: 728 LKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPP 768
Score = 44.3 bits (103), Expect = 8e-04
Identities = 52/207 (25%), Positives = 62/207 (29%), Gaps = 78/207 (37%)
Query: 29 PSAPSFRPQNLRLLH----PQQPPV---QYQYEPPSAPSTTFSNSPAPN-----FLPPRP 76
P+ P+ Q L+ + PQ PP + +++P S P + P P F PP P
Sbjct: 873 PTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPP 932
Query: 77 DFVPFPPPMPPSAQGPLP---------------PCPIRPPFPNHQMR----------HPF 111
VP PPP PP P P P +PP P Q HP
Sbjct: 933 SPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPP-PTPQRNSSIKSSSGAEHPE 991
Query: 112 PVPPCF--------PPMPPPMPCPNNPPVPGAPPGQGTF--------------------- 142
P P PP P P P APP G
Sbjct: 992 PKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPGVLQQGCVSAKAP 1051
Query: 143 -----------PFMMPPPSMPHPPPPP 158
F PP PPPPP
Sbjct: 1052 VLSGRGKDSVVEFPSPPSDSDFPPPPP 1078
Score = 41.2 bits (95), Expect = 0.007
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 23/138 (16%)
Query: 98 IRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPP 157
+ P P ++ P+ PP+PPP P P PP P PP P PS P
Sbjct: 606 VPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPP-------PLPSQSAPSAG 658
Query: 158 PVMPQQVNY------QYPPGYSHHNFPPPS---FNSFQNNPSSFLPSANNSSSPHFRHLP 208
P V Y Q +S F PP+ S P +P N P P
Sbjct: 659 SAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPP--NGVVP-----P 711
Query: 209 PYPLPKAPSERRSPERLK 226
P P P P+ + +LK
Sbjct: 712 PPPPPPPPTPGSAMAQLK 729
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 75.5 bits (184), Expect = 3e-13
Identities = 60/155 (38%), Positives = 77/155 (49%), Gaps = 20/155 (12%)
Query: 214 KAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR 273
++PS++RS K DD R R R RRER RS D+RR SR DR R
Sbjct: 25 RSPSDKRS----KRGDDRRSRSRDRDR--------RRERSRSRDKRRSRSR-----DRKR 67
Query: 274 TPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKD 333
R RS ER R RER R R RD RRS S R + G++S E R+R +E+ D
Sbjct: 68 L-RRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTE-NRSRSKEKTD 125
Query: 334 RWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEE 368
++ KDK+ EKE + D+N+ EEE
Sbjct: 126 GGESSKEKKKDKD-DKEDEKEKDAGNFDQNKLEEE 159
Score = 71.2 bits (173), Expect = 6e-12
Identities = 51/146 (34%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 239 GRGERHRSLDRRERGRSPDRRRQDS-----RYRSDYDRGRTPSRHRSYERSRERERERHR 293
GR RH RGRS R R S R D R R+ R R ERSR R++ R R
Sbjct: 2 GRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR 61
Query: 294 HRDN---RRSPSLERSYKKEYKRSGSRSPSREKKRARWEE-------EKDRWSDNQSSGK 343
RD RRS S ER +E +RS SR R + R+R K + ++N+S K
Sbjct: 62 SRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSK 121
Query: 344 DKNYTSIKEKEPEETMPDKNEEEEEE 369
+K KE ++ DK +E+E++
Sbjct: 122 EKTDGGESSKEKKKDKDDKEDEKEKD 147
Score = 43.1 bits (100), Expect = 0.002
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 16/171 (9%)
Query: 214 KAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRE-RGRSPDRRRQDSRYRSDYDRG 272
K S R +RL+ R RD S R R RS DRR R RS RR + S + +
Sbjct: 57 KRRSRSRDRKRLRR-SRSRERDRSRER-RRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKT 114
Query: 273 RTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEK 332
SR + E +E+ + +D++ + + + + R+++ +W EE+
Sbjct: 115 ENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQ 174
Query: 333 DRWSDNQSSGKDKNYTSIK-------------EKEPEETMPDKNEEEEEEL 370
+ + K +K E +P E + NE E EEL
Sbjct: 175 RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEEL 225
Score = 37.7 bits (86), Expect = 0.074
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 24/218 (11%)
Query: 277 RHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGS--------RSPSREKKRARW 328
R + R R R R R RSPS +RS + + +RS S RS SR+K+R+R
Sbjct: 3 RESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRS 62
Query: 329 EEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSENYYSSD 388
+ K R ++S +D++ + + + + +EN S
Sbjct: 63 RDRK-RLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSK 121
Query: 389 PMDQVGDSTVVGTSRLRDLYD------------KFEEELGSRQEKAKAARPPWEPPKTKL 436
G+S+ D D K EEE+ R+E+ + R E + K
Sbjct: 122 EKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWR---EEQRKKA 178
Query: 437 DEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRK 474
E++ + E + S D + D AE +++
Sbjct: 179 MENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKE 216
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 75.1 bits (183), Expect = 4e-13
Identities = 62/187 (33%), Positives = 78/187 (41%), Gaps = 24/187 (12%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPA----PNFLPPRPDFVPFPPPMPPSAQGPLPPCPIR 99
P PPVQ + PP++P + S +P P+ P P PP PP + PP
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 727
Query: 100 PPFPNHQMRHPFPVPPCFPPMPPPM-PCPNNPPVPGAPPGQGTFPFMMPPPSMPHPP--- 155
PP ++ P P PP PPM P P P PP+ APP Q PP S+P P
Sbjct: 728 PPLAAPPLQVP-PSPPASPPMSPSATPPPRVPPLLAAPPLQVP---PSPPASLPMSPLAK 783
Query: 156 PPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKA 215
PPP P + P PP SF + F PSA+ SP P P+A
Sbjct: 784 PPPQAPPAL---ATPPLQALPSPPASF----PGQAPFSPSASLPMSP-----LATPPPQA 831
Query: 216 PSERRSP 222
P +P
Sbjct: 832 PPVLAAP 838
Score = 67.4 bits (163), Expect = 9e-11
Identities = 69/247 (27%), Positives = 86/247 (34%), Gaps = 32/247 (12%)
Query: 29 PSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPR-------PDFVPF 81
P +PS P + PP+Q PP++P + S +P P PP P P
Sbjct: 684 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA 743
Query: 82 PPPMPPSAQGP--------LPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVP 133
PPM PSA P PP + P P P PP P PP + P +P
Sbjct: 744 SPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPP--PQAPPALATPPLQALP 801
Query: 134 GAP---PGQGTF----PFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQ 186
P PGQ F M P + P P PPV+ + Q PP PP+ + Q
Sbjct: 802 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL-LQVPPS-------PPASPTLQ 853
Query: 187 NNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRS 246
P + S S L P P P R L D H + E R
Sbjct: 854 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRG 913
Query: 247 LDRRERG 253
D G
Sbjct: 914 YDSGPEG 920
Score = 65.5 bits (158), Expect = 3e-10
Identities = 64/206 (31%), Positives = 76/206 (36%), Gaps = 32/206 (15%)
Query: 47 PPVQYQYEPPSAPSTTFSNSP---APNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF- 102
PP+Q PP++P + +P APN L PF PP P Q P P P PP
Sbjct: 628 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP-PASPPVS 686
Query: 103 ---------PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP------ 147
P P VPP PP PPM P+ P P APP P +P
Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPS-PPASPPM-SPSATPPPQAPPPLAAPPLQVPPSPPAS 744
Query: 148 PPSMPHPPPPPVMPQQV---NYQYPPG------YSHHNFPPPSF-NSFQNNPSSFLPSAN 197
PP P PPP +P + Q PP S PPP + P LPS
Sbjct: 745 PPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 198 NSSSPHFRHLPPYPLPKAPSERRSPE 223
S P LP +P P+
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQ 830
Score = 57.4 bits (137), Expect = 9e-08
Identities = 58/189 (30%), Positives = 65/189 (34%), Gaps = 56/189 (29%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQP-PVQYQYEPPSAPSTTFSNSPAPNFL 72
P R P RG P AP+ HP QP P Q P P
Sbjct: 252 PARSGPSARG----TPRAPA---------HPSQPKPKGLQALRP------------PQVT 286
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFP--------VPPCFPPMPP-P 123
PPR D P A GPL P+ P P+ P P +P PP PP
Sbjct: 287 PPRKDAAP--------ALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLA 338
Query: 124 MPCPNNPPVPGAPPGQGTFPF------MMPPPSMPHPP--PPPVMPQQVNYQYPPGYSHH 175
P P PP P APP T P PPSM PP PP + PP H
Sbjct: 339 TPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSL-----QTIPPIQVPH 393
Query: 176 NFPPPSFNS 184
+ PS +
Sbjct: 394 SLTSPSLQA 402
Score = 52.0 bits (123), Expect = 4e-06
Identities = 62/217 (28%), Positives = 75/217 (34%), Gaps = 47/217 (21%)
Query: 43 HPQQPPVQYQYEPP-----SAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPL---- 93
H Q P+ PP S + PA PP + PP +A PL
Sbjct: 498 HSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPH 557
Query: 94 ---PPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGT-----FPFM 145
PPCP P P P PP P P P PP +PP QG P
Sbjct: 558 LETPPCPA--PCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLA 615
Query: 146 MPPPSMPH----------PPP---PPVMPQQV-NYQYPPGYSHHNF-----PPPS----- 181
PPP P P P PP+ P + Q P + H PPPS
Sbjct: 616 TPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 675
Query: 182 -FNSFQNNPSSFLPSAN-NSSSPHFRHLPPYPLPKAP 216
F+ + P S PSA S +P PP +P +P
Sbjct: 676 PFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPPSP 710
Score = 39.7 bits (91), Expect = 0.020
Identities = 62/253 (24%), Positives = 79/253 (31%), Gaps = 65/253 (25%)
Query: 29 PSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPR---PDFVPFPP-P 84
PS P P L P PP PS P+T S +P PP P PP
Sbjct: 333 PSPPLATPLPLAPPSPSAPPSLQTL--PSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQ 390
Query: 85 MPPSAQGP---LPPCPIRPPF---------PNHQMRHPF-------------------PV 113
+P S P PP P+ P Q H F
Sbjct: 391 VPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPAST 450
Query: 114 PPCFPPMPPPMPCPNNPPV-----PGAPPGQGTF---PFMMPPPSMPHPPPPPVMPQQVN 165
PP PP+ P+ P +PP+ P P P H P P+ +
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLS----S 506
Query: 166 YQYPPGYSHHNFPPPSFNS---------FQNNPSSFLPSANNSS----SPHFRHLP---P 209
PP + + PPS + +N PS P +S +PH P P
Sbjct: 507 LIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAP 566
Query: 210 YPLPKAPSERRSP 222
PL PS +P
Sbjct: 567 CPLQAPPSPLTTP 579
Score = 32.0 bits (71), Expect = 4.1
Identities = 48/198 (24%), Positives = 65/198 (32%), Gaps = 37/198 (18%)
Query: 31 APSFRPQNLRLLHPQQPPVQYQYEPPSAPS--TTFSNSPAPNFLPPRPDFVPFPPPMPPS 88
APS RP+ PP + + S+ S +T SPA P + P S
Sbjct: 193 APSARPR---------PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLS 243
Query: 89 AQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPP 148
+ P+ P + P P P P P P PP + P + P
Sbjct: 244 SSAT----PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL 299
Query: 149 PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLP 208
S P P P G PPP +N ++ LP+ S P
Sbjct: 300 SSSPLATPS-----------PSGTKARPVPPP------DNAATPLPATLPPSPP-----L 337
Query: 209 PYPLPKAPSERRSPERLK 226
PLP AP +P L+
Sbjct: 338 ATPLPLAPPSPSAPPSLQ 355
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 74.7 bits (182), Expect = 5e-13
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 217 SERRSPERLKHYDDHRHRDHSHGRG--ERHRSLDRR-----ERGRSPDRRRQDSRYRSDY 269
+ R ER K + R RD R ER R DR+ ER R +R+R+ R R +
Sbjct: 251 ASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRER-ER 309
Query: 270 DRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSRE-KKRARW 328
+R R R R ER RERER+R RD + +R + E R +R RE +++A
Sbjct: 310 ERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAER 369
Query: 329 EEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 369
E E++R D QS+ +E+E E D++ ++E E
Sbjct: 370 ERERERERDRQSA---------REREERERDRDRDRQKERE 401
Score = 68.9 bits (167), Expect = 3e-11
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 27/250 (10%)
Query: 214 KAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR 273
+ P + SP R G G+ H+ D +R R+ + R+ R + +R
Sbjct: 29 RRPGSQESPRR-------------RGLGQAHKDADGDDRERNRQKERERRREKRQTERET 75
Query: 274 TPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRAR-WEEEK 332
R R E+ R R+R+RHR R R ER +E R + +R+K+R R E E
Sbjct: 76 DRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREG 135
Query: 333 DRWSDNQSSG---KDKNYTSIKEKEPE-----ETMPDKNEEEEEELLKPVWIRCTHSENY 384
+R D Q+ G +++ + KE+E + + ++N ++E E K R E
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKN---RQERRERE 192
Query: 385 YSSDPMDQVGD-STVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 443
+ ++ D + G R R+ + E E + ++ + + E + K + E +
Sbjct: 193 RQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREK-QAERERA 251
Query: 444 SESECESDED 453
SE E E D++
Sbjct: 252 SERETERDKE 261
Score = 66.2 bits (160), Expect = 2e-10
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 218 ERRSPERLKHYDDHRHRDHSHGRGERHRSLDR---RERGRSPDRRRQDSRYRSDYDRGRT 274
ERR +R + R R+ + +RHR DR R+R R +R RQ R R
Sbjct: 63 ERRREKRQTERETDRKRERRREK-DRHRKRDRHRERQRDREKERERQTDRERD------- 114
Query: 275 PSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDR 334
R R ER+R++ERER R+ R + ++E +R RE++ R + +
Sbjct: 115 --RQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTE 172
Query: 335 WSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVG 394
+ + ++KN +E+E + +K E+ E + R E ++ Q
Sbjct: 173 RNRQKEREREKNRQERRERERQREKENKTEDRHSERGRE---RERERETETETERKRQ-- 227
Query: 395 DSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSSESECESDED 453
T R RD K E E + E+ +A+ + + E E E E D D
Sbjct: 228 ------TDRERDRQRKTEREREKQAERERAS-----------ERETERDKERERERDRD 269
Score = 65.9 bits (159), Expect = 3e-10
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 218 ERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRS-DYDRGRTPS 276
+RR ER + D R R R + +RER R +R R+ R R + +R R
Sbjct: 273 DRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRE 332
Query: 277 RHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWS 336
R E+ RER+R+R D R+ R +++ +R R R+++ AR EE++R
Sbjct: 333 TERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDR 392
Query: 337 DNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 369
D + + T ET + E++ E
Sbjct: 393 DRDRQKERERQTEKDRDGQRETEKQREREKDRE 425
Score = 63.5 bits (153), Expect = 1e-09
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 223 ERLKHYDDHRHRDHSHGRGERHRSLDR-RERGRSPDRRRQDSRYRSDYDRGRTPSRHRSY 281
ER + D + R+ R ER R +R R++ R ++ RQ+ R R + R
Sbjct: 148 ERERQRDAEKERERQTDR-ERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHS 206
Query: 282 ERSRERERERH------------RHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWE 329
ER RERERER R RD +R ER + E +R+ R R+K+R R E
Sbjct: 207 ERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERER-E 265
Query: 330 EEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEE 368
++DR D + +++ +++ E + + E +
Sbjct: 266 RDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQ 304
Score = 63.5 bits (153), Expect = 1e-09
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 223 ERLKHYDDHRHRDHSHGR-----GERHRSLDR-----RERGRSPDRRRQDSRYRSDYDRG 272
ER + D R R R ER R+ +R +ER R DR R R + + +R
Sbjct: 223 ERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQ 282
Query: 273 RTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEE-- 330
R R ER RE ER+R R R+ R R ++E +R R RE +R R +E
Sbjct: 283 TDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERE 342
Query: 331 -------EKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 369
E DR N+ +G++ + +E+E E ++ E EE
Sbjct: 343 RKRKRQTEMDR-ERNRQTGREGRRQAERERERERERDRQSAREREE 387
Score = 60.5 bits (145), Expect = 1e-08
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 218 ERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSR 277
+ R +R + + R R+ GR R ++ RER R +R RQ +R R + +R R
Sbjct: 339 KERERKRKRQTEMDRERNRQTGREGRRQA--ERERERERERDRQSAREREERERDR---- 392
Query: 278 HRSYERSRERERERHRHRDNRRSPSLERSYKK--EYKRSGSRSPSREKKRARWEEEKDRW 335
+R +ERER+ + RD +R +R +K E +R R REK++ R E +++R
Sbjct: 393 --DRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGR-ERDRERQ 449
Query: 336 SDNQSSGKDKNYTSIKEKEPEET 358
+D Q +G+ + +++ P T
Sbjct: 450 TDRQ-AGRQRKRSTLYVNPPPRT 471
Score = 60.1 bits (144), Expect = 1e-08
Identities = 66/255 (25%), Positives = 97/255 (38%), Gaps = 23/255 (9%)
Query: 214 KAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR 273
K ERR ER + ++ HS ER R RE +R+RQ R R DR R
Sbjct: 183 KNRQERRERERQREKENKTEDRHSERGRERERE---RETETETERKRQTDRER---DRQR 236
Query: 274 TPSRHRSYERSRERERERHRHRDNRRSPSLERS-----YKKEYKRSGSRSPSREKKRARW 328
R R + RER ER RD R +R +KE +R R R +R R
Sbjct: 237 KTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRE 296
Query: 329 EEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSENYYSSD 388
E K + +++N +E+E E + E E + + R +E
Sbjct: 297 TERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTE------ 350
Query: 389 PMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSSESEC 448
MD+ + G R + E E R+ ++AR E + + D D + E +
Sbjct: 351 -MDRERNRQ-TGREGRRQAERERERE---RERDRQSAREREERERDR-DRDRQKERERQT 404
Query: 449 ESDEDSTCSSSSDSE 463
E D D + E
Sbjct: 405 EKDRDGQRETEKQRE 419
Score = 59.3 bits (142), Expect = 2e-08
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 220 RSPERLKHYDDHRHRDHSHGRGERHRSLDRR-ERGRSPDRRRQDSRYRSDYDRGRTPSRH 278
R ER + + R+ R + +++ DR ERGR +R R+ ++ +R R R
Sbjct: 175 RQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETE---TETERKRQTDRE 231
Query: 279 RSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRS-PSREKKRARWEEEKDRWSD 337
R +R ERERE+ R+ ER ++E +R R R+K+R R + K +
Sbjct: 232 RDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRT 291
Query: 338 NQSSGKDKNYTSIKEKEPEETMPDKNEEEEE 368
+ ++ +E+E E K E E E
Sbjct: 292 ERDRETERKRERQRERERERERNRKRERERE 322
Score = 57.8 bits (138), Expect = 7e-08
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 220 RSPERLKHYDDHRHRDHSHGRG-ERHRSLDR-RERGRSPDRRRQDSRYR-----SDYDRG 272
R ER + R R+ R ER R +R RER R +R R+ R R ++ DR
Sbjct: 295 RETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRE 354
Query: 273 RTPSRHRSYERSRERERERHRHRDNR---------RSPSLERSYKKEYKRSGSRSPSREK 323
R R R ERERER R RD + R +R ++E + R RE
Sbjct: 355 RNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRET 414
Query: 324 KRARWEEEKDRWSD-NQSSGKDKNYTSIKEKEPE 356
++ R E EKDR S+ + G+++ +E++ E
Sbjct: 415 EKQR-EREKDRESERGRERGREREKQKGRERDRE 447
Score = 37.7 bits (86), Expect = 0.074
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 259 RRQDSRYRSDYDRGRTPSRHRSYERSRERERERHR-HRDNRRSPSLERSYKKEYKRSGSR 317
RR+ S RG + + RER R++ R R +R E K+E +R R
Sbjct: 28 RRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDR 87
Query: 318 SPSREKKRARW---EEEKDRWSD---NQSSGKDKNYTSIKEKEPE 356
R++ R R E+E++R +D ++ K++N +E+E E
Sbjct: 88 HRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETE 132
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 73.9 bits (180), Expect = 9e-13
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 214 KAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDR-RERGRSPDRRRQDSRYRSDYDRG 272
K ER+ E+ + + R R+ R ER R +R RER + +R R+ R R D DR
Sbjct: 297 KKEKERQEIEKERR-ERERERERERERREREREREREREREKEKERERERERDR-DRDRT 354
Query: 273 RTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEK 332
+ R R ER R+R+RER R+ RS S E+S +E +R R RE++R R E E+
Sbjct: 355 KERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERER-ERER 413
Query: 333 DRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELL--KPVWIRCTHSENYYSSDPM 390
+R + + +E+E E+ EE+EE+ + + + E Y
Sbjct: 414 ERERERE-----------REREREKDKKRDREEDEEDAYERRKLERKLREKEAAY----Q 458
Query: 391 DQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAAR----------PPWEPPKTKLDEDL 440
+++ + + + R+ + E E R+E AK A+ + PK L
Sbjct: 459 ERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSAL 518
Query: 441 ES---SSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPD 479
+ E E E+DE + E + I + + HPD
Sbjct: 519 QKRLRDREKEMEADER---DRKREKEELEEIRQRLLAEGHPD 557
Score = 67.8 bits (164), Expect = 7e-11
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 221 SPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRS 280
S E K D H+ + G+ E+ R +ER R +R R+ R R + +R R R R
Sbjct: 278 SREISKFRDTHKKLEEEKGKKEKERQEIEKER-RERERERERERERRERERERERERERE 336
Query: 281 YERSRERE----------RERHRHRDNR--RSPSLERSYKKEYKRSGSRSPSREKKRARW 328
E+ RERE +ER R RD R ERS + RS SR SR+++R R
Sbjct: 337 KEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERE 396
Query: 329 EEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 369
E + + +++ +E+E E K + EE+E
Sbjct: 397 REREREREREREREREREREREREREREREKDKKRDREEDE 437
Score = 53.5 bits (127), Expect = 1e-06
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 8/215 (3%)
Query: 242 ERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERER-HRHRDNRRS 300
E R L RE + D ++ + ++ R ER RERERER R R+ R
Sbjct: 271 EDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERE 330
Query: 301 PSLERSYKKEYKRSGSRSPSREKKRAR---WEEEKDRWSDNQ-SSGKDKNYTSIKEKEPE 356
ER +KE +R R R++ + R + E+DR D + SS ++K+ + +EK +
Sbjct: 331 REREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRD 390
Query: 357 ETMPDKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYD--KFEEE 414
+ E E E + R E + ++ D D Y+ K E +
Sbjct: 391 RERERERERERERERERERERERERERERERE-REREKDKKRDREEDEEDAYERRKLERK 449
Query: 415 LGSRQEKAKAARPPWEPPKTKLDEDLESSSESECE 449
L ++ + WE + K + E +E E E
Sbjct: 450 LREKEAAYQERLKNWEIRERKKTREYEKEAEREEE 484
Score = 48.1 bits (113), Expect = 6e-05
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 223 ERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRT-PSRHRS- 280
ERLK+++ + E R +RR +R ++ + DYD R P +R
Sbjct: 459 ERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKE--FLEDYDDDRDDPKYYRGS 516
Query: 281 --YERSRERERERHR-HRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRW-- 335
+R R+RE+E RD +R ++ G P E +R E E+ R
Sbjct: 517 ALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQ 576
Query: 336 -SDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKP 373
S +++ KE++ EE M ++ E E++ LKP
Sbjct: 577 IKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKP 615
Score = 37.4 bits (85), Expect = 0.097
Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 220 RSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHR 279
R ER + D R R+ R L+R+ R + R ++ R R +R
Sbjct: 419 REREREREKDKKRDREEDEEDAYERRKLERKLREKEA---AYQERLKNWEIRERKKTREY 475
Query: 280 SYERSRERERERHRHRDNRRSPSL------ERSYKKEYKRSGSRSPSREKKRARWEEEKD 333
E RE ER R ++ +R +R K Y+ S + R++++ +E+D
Sbjct: 476 EKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERD 535
Query: 334 R------------------WSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 369
R D + + + + ++P+ ++EEEEEE
Sbjct: 536 RKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEE 589
Score = 35.4 bits (80), Expect = 0.37
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 102 FPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMP 161
FP H R P +P P +PPP PPVP P M+P P P P V+
Sbjct: 3 FPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTP-------MIPVPMSIMAPAPTVLV 55
Query: 162 QQVN 165
V+
Sbjct: 56 PTVS 59
Score = 31.6 bits (70), Expect = 5.3
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 81 FPPPM--PPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM 124
FPP + PP LPP P FP P PVPP P +P PM
Sbjct: 3 FPPHLNRPPMGIPALPPGIPPPQFPG----FPPPVPPGTPMIPVPM 44
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo
sapiens]
Length = 1758
Score = 73.9 bits (180), Expect = 9e-13
Identities = 83/301 (27%), Positives = 111/301 (36%), Gaps = 52/301 (17%)
Query: 56 PSAPST-TFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP 114
PS P+T F P P PP P +P PP +PP P P P +PP + + P
Sbjct: 548 PSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFP-PGQPPPAGYSV-----PP 601
Query: 115 PCFPPMPPPMPCP-----------NNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQ 163
P FPP P + P N P APP F + P
Sbjct: 602 PGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPP-LSREEFYREQRRLKEESKSPYSGS- 659
Query: 164 VNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPE 223
YS ++ S S+ S + S S + PPYP RR
Sbjct: 660 -------SYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYP-------RRGRG 705
Query: 224 RLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYD-RGRTPSRHRSYE 282
+ ++Y R R SHG HRS R RSP RR SR RS RG++P++ +
Sbjct: 706 KSRNY---RSRSRSHG---YHRS-----RSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQ 754
Query: 283 RSRERERERHRHRDNRRSPSLERSYKKEYKRS-GSRSPSREKKRARWEEEKDRWSDNQSS 341
ERE + + R K Y RS R P +++ WE + W +
Sbjct: 755 GETERE-----YFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKYYK 809
Query: 342 G 342
G
Sbjct: 810 G 810
Score = 50.1 bits (118), Expect = 1e-05
Identities = 78/355 (21%), Positives = 130/355 (36%), Gaps = 49/355 (13%)
Query: 167 QYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFR-HLPPYPLPKAPSER----RS 221
+Y GY+ P PS N +P FLP N +SP R Y ++ R
Sbjct: 806 KYYKGYAAGAQPRPSANRENFSPERFLP-LNIRNSPFTRGRREDYVGGQSHRSRNIGSNY 864
Query: 222 PERLKHYDDHRHRDHS------------HGRGERHRSLDRRERG---------------- 253
PE+L D H +D++ G+G +H+ +R +G
Sbjct: 865 PEKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSR 924
Query: 254 --RSP---DRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYK 308
R P + + DS + TP R + + R + K
Sbjct: 925 KSREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPKAKGDK 984
Query: 309 KEYKRSGSRSPSREK--KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEE 366
+ K GS +E K A+ +EK D + ++ IK K EET N +
Sbjct: 985 TKRKNDGSAVSKKENIVKPAKGPQEK---VDGERERSPRSEPPIK-KAKEETPKTDNTKS 1040
Query: 367 EEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDK--FEEELGSRQEKAKA 424
K I T + + S Q ++ V +++ Y K E+L +++EKAK
Sbjct: 1041 SSSSQKDEKITGTPRKAHSKSAKEHQ--ETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKK 1098
Query: 425 ARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPD 479
+P K ++ + E + D +S+ S EV +++ ++K PD
Sbjct: 1099 PNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPD 1153
Score = 36.2 bits (82), Expect = 0.22
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 146 MPPPSMPHPPPPPVMPQQV---------NYQYP---PGYSHHNFPPPSFNSFQNNPSSFL 193
+PPP P PPP P++ + + Q P P S P PS +S +N SS
Sbjct: 336 LPPPPPPIPPPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHPAPSISSLTSNQSSLA 395
Query: 194 P--SANNSSSP 202
P S N SS+P
Sbjct: 396 PPVSGNPSSAP 406
Score = 35.0 bits (79), Expect = 0.48
Identities = 43/216 (19%), Positives = 84/216 (38%), Gaps = 25/216 (11%)
Query: 195 SANNSSSPHFRHLPPYPLPKAPSERRSPER--LKHYDDHRHRDHSHGRGERHRSLDRRER 252
S+N +P+ Y + S +R E+ L D R+ G++++ + R+
Sbjct: 1428 SSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDL 1487
Query: 253 GR-----------SPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERH--RHRDNRR 299
+ SP R R+ +++ YD R +S +++ ++RE+H R+N+
Sbjct: 1488 PKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKSVDKNPCKDREKHVLEARNNKE 1547
Query: 300 SPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETM 359
S + Y + EK++ + +K +S +E +E
Sbjct: 1548 SSGNKLLYILNPPET-----QVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRETDEAA 1602
Query: 360 --PDKNEEEEEELLKPVWIRCTHSENYYSSDPMDQV 393
PD NE + E V ++ S S D D++
Sbjct: 1603 FEPDYNESDSE---SNVSVKEEESSGNISKDLKDKI 1635
Score = 33.5 bits (75), Expect = 1.4
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 29 PSAPSFRPQNLRLLHP-QQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPM-- 85
P P RP R L P + P+ Q +P P T+ S PAP+ + PP+
Sbjct: 341 PPIPPPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHPAPSISSLTSNQSSLAPPVSG 400
Query: 86 -PPSAQGPLP 94
P SA P+P
Sbjct: 401 NPSSAPAPVP 410
Score = 32.3 bits (72), Expect = 3.1
Identities = 16/82 (19%), Positives = 36/82 (43%)
Query: 252 RGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEY 311
R SP + S S S+ + ++ +++ ++ +H+ +++ E +K
Sbjct: 1668 RSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQ 1727
Query: 312 KRSGSRSPSREKKRARWEEEKD 333
K + S++ K E+EKD
Sbjct: 1728 KHKHKKKKSKKNKDKEKEKEKD 1749
Score = 31.6 bits (70), Expect = 5.3
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 255 SPDRRRQDSR--YRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYK 312
+P++R+ ++ S+ DR +S +S + R +H R S + + + ++ K
Sbjct: 1381 NPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKK 1440
Query: 313 RSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 369
KR + E R D+ S KD + E +P K + ++
Sbjct: 1441 TDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSKK 1497
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.074
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.074
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.074
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.074
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 73.6 bits (179), Expect = 1e-12
Identities = 69/246 (28%), Positives = 88/246 (35%), Gaps = 63/246 (25%)
Query: 19 PRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPP-------------SAP--STTF 63
P GGHG P + + P PP+ PP S P S +
Sbjct: 402 PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVY 461
Query: 64 SNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFP-PMPP 122
+PP P + PPP PPS Q P PP PP+ Q + P P PP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASST 521
Query: 123 PMPCPNN-------------PP----------VPGAPPGQGTFPFMMP---------PPS 150
P+P N PP PGAP QG P M+P PP
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN-PTMVPLPPGVQPPLPPG 580
Query: 151 MPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPY 210
P PPPPP PPG + + PP +PS+F+ + +PP+
Sbjct: 581 APPPPPPP----------PPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVA----GMPPF 626
Query: 211 PLPKAP 216
+P AP
Sbjct: 627 GMPPAP 632
Score = 48.5 bits (114), Expect = 4e-05
Identities = 56/182 (30%), Positives = 65/182 (35%), Gaps = 46/182 (25%)
Query: 13 HPGRGC--PRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAP----------- 59
H G+G P G P PS +P P P Q Q +PP P
Sbjct: 464 HQGKGMMPPPPMGMMPPPPPPPSGQPPPPPS-GPLPPWQQQQQQPPPPPPPSSSMASSTP 522
Query: 60 ------STTFSNSPAPNFLPP--RPDFVPFPPPMPPSAQG-----PLPPCPIRPPFPNHQ 106
+TT + S +PP + P P QG PLPP ++PP P
Sbjct: 523 LPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP-GVQPPLP--- 578
Query: 107 MRHPFPVPPCFPPMPPP-----MPCPNNPPVPGAPPG-----QGTFPFMMPPPSMPHPPP 156
P PP PP PPP M P PP P P G MPP MP PP
Sbjct: 579 ---PGAPPP--PPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPP 633
Query: 157 PP 158
PP
Sbjct: 634 PP 635
Score = 38.5 bits (88), Expect = 0.044
Identities = 45/139 (32%), Positives = 52/139 (37%), Gaps = 19/139 (13%)
Query: 46 QPPVQYQYEPPSAPSTT-FSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF-- 102
+ PV S P+TT +++P P P PPP S PP P
Sbjct: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNP-----PPPSLMSTTQSRPPWMNSGPSES 376
Query: 103 -PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSM-PHPPPPPVM 160
P H M P P P P P P+ G P Q P PPP M P PPP
Sbjct: 377 RPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN-PNGPPPPWMQPPPPPMNQG 435
Query: 161 PQQVNYQYPPGYSHHNFPP 179
P +PPG HH PP
Sbjct: 436 P------HPPG--HHGPPP 446
Score = 36.6 bits (83), Expect = 0.17
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 69 PNFLPPRPDFVPFPPPMPPS-------AQGPLPPCPIRPP-FPNHQMRHPFPVPPCFPPM 120
P PP P P PPP PP A P PP P+ P F +PP P
Sbjct: 571 PGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPP 630
Query: 121 PPPMPCPNN 129
PP P P N
Sbjct: 631 APPPPPPQN 639
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 72.8 bits (177), Expect = 2e-12
Identities = 66/211 (31%), Positives = 77/211 (36%), Gaps = 49/211 (23%)
Query: 55 PPSAP----STTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGP------LPPCPIRP---- 100
PPSAP S+ S P P PP FPPP+PP P +PP P+ P
Sbjct: 217 PPSAPNPVVSSLGSGLPPPGMPPPGS----FPPPVPPPGALPPGIPPAMPPPPMPPGAAG 272
Query: 101 -----------PFPNHQMRHPFPVPPCFPPMP--PPMPCPNNPP-----VPGAPPGQGTF 142
P H HP P PP P P M ++ P PPG G
Sbjct: 273 HGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQ 332
Query: 143 PFMMPPPSMPHPPPPPV-MPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS 201
P PPP MPHP PPP+ MP + PP S P P P +P +
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPP----RGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGP 388
Query: 202 PHFRHL--------PPYPLPKAPSERRSPER 224
P PP P P+ P R P R
Sbjct: 389 PRPPPYGYQRGPLPPPRPTPRPPVPPRGPLR 419
Score = 62.4 bits (150), Expect = 3e-09
Identities = 50/150 (33%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P G G P P P HP +Q + P + P P
Sbjct: 281 PGAGHP-GHGHSHPHPFPPGGMP------HPGMSQMQLAHHGPHGLGHPHAGPPGSGGQP 333
Query: 74 PRPDFVPFPPP-MPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
P P PPP MP P+ P PPF + M HP P+PP PPP+ P+
Sbjct: 334 P-----PRPPPGMPHPGPPPMGMPPRGPPFGS-PMGHPGPMPPHGMRGPPPLMPPHGYTG 387
Query: 133 PGAPPGQGTFPFMMPPP-SMPHPPPPPVMP 161
P PP G +PPP P PP PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVPPRGP 417
Score = 58.5 bits (140), Expect = 4e-08
Identities = 49/153 (32%), Positives = 53/153 (34%), Gaps = 28/153 (18%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQ------------- 90
P PP + PPSA T + P P P F P P P +Q
Sbjct: 264 PPMPPGAAGHGPPSA-GTPGAGHPGHGHSHPHP-FPPGGMPHPGMSQMQLAHHGPHGLGH 321
Query: 91 ---GPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP 147
GP PP P M HP P P PP PP P P P P G P +MP
Sbjct: 322 PHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMP 381
Query: 148 PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
P PP PP P GY PPP
Sbjct: 382 PHGYTGPPRPP----------PYGYQRGPLPPP 404
Score = 48.1 bits (113), Expect = 6e-05
Identities = 47/145 (32%), Positives = 60/145 (41%), Gaps = 24/145 (16%)
Query: 88 SAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP 147
+AQ PL RP HQ+ P PP P P + P PG PP G+FP +P
Sbjct: 196 AAQNPLSQAD-RP----HQLFADAPPPPS-APNPVVSSLGSGLPPPGMPP-PGSFPPPVP 248
Query: 148 PP-SMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRH 206
PP ++P P PP MP PPG + H PS+ P A + H H
Sbjct: 249 PPGALP-PGIPPAMPPP---PMPPGAAGH-----------GPPSAGTPGAGHPGHGH-SH 292
Query: 207 LPPYPLPKAPSERRSPERLKHYDDH 231
P+P P S +L H+ H
Sbjct: 293 PHPFPPGGMPHPGMSQMQLAHHGPH 317
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 72.4 bits (176), Expect = 3e-12
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 32/183 (17%)
Query: 220 RSPERLKHYDDHRHRDHSHGRGERHRSLDR-------RERGRSPDRRRQDSR-------- 264
R +R + ++ R++ H + +RHR DR RER + DR+RQ R
Sbjct: 19 RERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETER 78
Query: 265 ---YRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSR 321
+ +R R R R +R RER+RE R+R+ R ER + E +R R R
Sbjct: 79 QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR 138
Query: 322 EKKRAR---------WEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLK 372
+++R R + E+ RW++ + K++ K++ +E K EE+ E K
Sbjct: 139 QRERERQRQRERKRETDRERQRWAEREERKKER-----KKERKKERKEKKKEEKRREDKK 193
Query: 373 PVW 375
W
Sbjct: 194 RKW 196
Score = 68.2 bits (165), Expect = 5e-11
Identities = 52/156 (33%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 223 ERLKHYDDHRHRDHSHGRG-ERHRSLDR-RERGRSPDRRRQDSRYRS---DYDRGRTPSR 277
ER K D R R+ R ER R R RER R DR R R R + DR R +R
Sbjct: 57 ERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNR 116
Query: 278 HRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSD 337
ER ++ ERER R R+ +R ER ++E KR R +R RW E ++R +
Sbjct: 117 KGGRERDKQTERERDRERERQRQRERERQRQRERKRETDR------ERQRWAEREERKKE 170
Query: 338 NQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKP 373
+ K + KEK+ EE + + + E + P
Sbjct: 171 RKKERKKER----KEKKKEEKRREDKKRKWGEGISP 202
Score = 66.2 bits (160), Expect = 2e-10
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 220 RSPERLKHYDDHRHRDHSHGRGERHRSLDR-RERGRSPDRRRQDSRYRSDYDRGRTPSRH 278
R E + D R R++ R RHR DR RER R DR ++ R + + DR R R
Sbjct: 13 RGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQK-ERDRQRQRERE 71
Query: 279 RSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDN 338
E R+RER+R R R + ++ +E KR R+ R +K R E+D+ ++
Sbjct: 72 TERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGR---ERDKQTER 128
Query: 339 QSSGKDKNYTSIKEKEPEETMPDKNEEEEE 368
+ +++ +E+E + K E + E
Sbjct: 129 ERD-RERERQRQRERERQRQRERKRETDRE 157
Score = 62.4 bits (150), Expect = 3e-09
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 219 RRSPERLKHYDDHRHRDHSHGRGERHRSLDR-RERGRSPDRRRQDSRYRSDYDRGRTPSR 277
+R ER + D R +D ER R DR RER R R R D + + DR R R
Sbjct: 83 QRQRERKRQTDRERDKDRDR---ERKRETDRNRERNRKGGRER-DKQTERERDRERERQR 138
Query: 278 HRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSD 337
R ER R+RER+R R+ +R E K+ K ++K+ R E++K +W +
Sbjct: 139 QRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKKRKWGE 198
Query: 338 NQS 340
S
Sbjct: 199 GIS 201
Score = 62.0 bits (149), Expect = 4e-09
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 232 RHRDHSHGRG---ERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERE 288
R R+ G+ ER R +R + +R RQ R+R +R R R + ER +ER+
Sbjct: 7 RKRETDRGKETERERDRQRERENQTERENRHRQRDRHR---ERDRQTDREKERERQKERD 63
Query: 289 RERHRHRDNRRSP--SLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKN 346
R+R R R+ R ER ++E KR R +++ R R E N+ G++++
Sbjct: 64 RQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERD 123
Query: 347 YTSIKEKEPEETMPDKNEEEEE 368
+ +E++ E + E E +
Sbjct: 124 KQTERERDRERERQRQRERERQ 145
Score = 49.7 bits (117), Expect = 2e-05
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 249 RRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRH--RDNRRSPSLERS 306
+RER R DR ++ R R + + R R+R RER R R+ R ER
Sbjct: 4 QRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERD 63
Query: 307 YKKEYKRSGSRSPSREKKRARWEEEK---DRWSDNQSSGKDKNYTSIKEKEPEETMPDKN 363
+++ +R R R+++R R E K DR D + K T + + +++
Sbjct: 64 RQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERD 123
Query: 364 EEEEEE 369
++ E E
Sbjct: 124 KQTERE 129
Score = 44.7 bits (104), Expect = 6e-04
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 260 RQDSRYRSDYDRGRTPSRHRSYERSRE-------RERERHRHRDNRRSPSLERSYKKEYK 312
RQ R R + DRG+ R R +R RE R R+R RHR+ R E+ +++ +
Sbjct: 3 RQRERKR-ETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61
Query: 313 RSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEE 366
R R RE +R E +R + Q + K T +E++ + K E +
Sbjct: 62 RDRQRQRERETER-----ETERQRERQRQRERKRQTD-RERDKDRDRERKRETD 109
Score = 39.7 bits (91), Expect = 0.020
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 270 DRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWE 329
+R R R + ERER+R R R+N+ R +++ R R REK+R R +
Sbjct: 2 ERQRERKRETDRGKETERERDRQRERENQTERE-NRHRQRDRHRERDRQTDREKERERQK 60
Query: 330 E-----EKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 369
E +++R ++ ++ + + + K + DK+ + E +
Sbjct: 61 ERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERK 105
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 72.4 bits (176), Expect = 3e-12
Identities = 72/248 (29%), Positives = 89/248 (35%), Gaps = 50/248 (20%)
Query: 35 RPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQG--P 92
RP R P PP + PS P + S+ P PP P P PPP+PPS+ G
Sbjct: 274 RPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPP---PPPPPSRPGPPPLPPSSSGNDE 330
Query: 93 LPPCPIR--------PPFPNHQMRHPFPVPPC-------------FPPMPPPMPCPNNPP 131
P P R PP P+ P P PP P+PPP P N
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGS 390
Query: 132 VPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSF---NSFQNN 188
A P P S P PP+ P + + PP PPPS N FQ++
Sbjct: 391 TSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP------PPPSTSIRNGFQDS 444
Query: 189 PSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLD 248
P + P LPP P P + + P +L R E +
Sbjct: 445 PCEDEWESRFYFHP-ISDLPP-PEPYVQTTKSYPSKL-------------ARNESRSGSN 489
Query: 249 RRERGRSP 256
RRERG P
Sbjct: 490 RRERGAPP 497
Score = 67.8 bits (164), Expect = 7e-11
Identities = 76/246 (30%), Positives = 92/246 (37%), Gaps = 62/246 (25%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYE--PPSAPSTT--FSNSPAP 69
PGR P GH + P PQ R+ P +P V + + PP PST +SP
Sbjct: 147 PGR-FPVPSPGHRSGPP----EPQRNRM-PPPRPDVGSKPDSIPPPVPSTPRPIQSSPHN 200
Query: 70 NFLPP------RPDFVPFPPPMPPSA----------QGPLP---PCPIRPPFPNHQMRHP 110
PP +P P PPP P + Q PL P RPP P R
Sbjct: 201 RGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRAL 260
Query: 111 FPVPPCFPP------------MPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPP 158
PP PP +PPP P N PPVP P + PPP P PPP
Sbjct: 261 DDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPP 320
Query: 159 VMPQQVNYQYPPGYSHHNFPP--PSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
+ PP S ++ P P N ++ + LPS S PLP P
Sbjct: 321 L---------PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSG----------PLPPPP 361
Query: 217 SERRSP 222
SER P
Sbjct: 362 SERPPP 367
Score = 40.0 bits (92), Expect = 0.015
Identities = 48/160 (30%), Positives = 55/160 (34%), Gaps = 29/160 (18%)
Query: 64 SNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPP 123
S P LPP P PPS G P P P H+ PP P
Sbjct: 121 SGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPV-----PSPGHRSG---------PPEPQR 166
Query: 124 MPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
P PP P G+ P +PPP P P P PG P P+
Sbjct: 167 NRMP--PPRPDV----GSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220
Query: 184 SFQNNPSSFL------PSANNSSSPHFRHLPPYPLPKAPS 217
F N + L S +SSSP F + P PLP PS
Sbjct: 221 PFPGNRGTALGGGSIRQSPLSSSSP-FSNRP--PLPPTPS 257
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,182,757
Number of Sequences: 37866
Number of extensions: 4152092
Number of successful extensions: 66044
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 1548
Number of HSP's that attempted gapping in prelim test: 23923
Number of HSP's gapped (non-prelim): 17626
length of query: 1337
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1223
effective length of database: 13,930,794
effective search space: 17037361062
effective search space used: 17037361062
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.