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Search of human proteins with 155030234
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
(1374 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 2891 0.0
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 2791 0.0
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 89 2e-17
gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 84 9e-16
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 84 9e-16
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 79 2e-14
gi|160707881 formin 2 [Homo sapiens] 79 4e-14
gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 78 7e-14
gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 78 7e-14
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 78 7e-14
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 78 7e-14
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 78 7e-14
gi|11386183 WAS protein family, member 2 [Homo sapiens] 77 9e-14
gi|47132519 Ras association and pleckstrin homology domains 1 is... 77 1e-13
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 76 3e-13
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 76 3e-13
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 75 4e-13
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 75 6e-13
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 74 1e-12
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 74 1e-12
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 74 1e-12
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 74 1e-12
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 74 1e-12
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 73 2e-12
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 72 3e-12
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 72 3e-12
gi|153792074 proline rich 12 [Homo sapiens] 72 4e-12
gi|157168329 formin 1 [Homo sapiens] 72 5e-12
gi|210032580 SET domain containing 1B [Homo sapiens] 72 5e-12
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 71 6e-12
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 2891 bits (7494), Expect = 0.0
Identities = 1374/1374 (100%), Positives = 1374/1374 (100%)
Query: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS
Sbjct: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
Query: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM
Sbjct: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
Query: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
Sbjct: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
Query: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
Sbjct: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
Query: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS
Sbjct: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
Query: 301 PSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK 360
PSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK
Sbjct: 301 PSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK 360
Query: 361 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 420
KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN
Sbjct: 361 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 420
Query: 421 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 480
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
Sbjct: 421 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 480
Query: 481 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 540
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
Sbjct: 481 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 540
Query: 541 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 600
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI
Sbjct: 541 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 600
Query: 601 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 660
FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY
Sbjct: 601 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 660
Query: 661 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 720
DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA
Sbjct: 661 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 720
Query: 721 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 780
NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA
Sbjct: 721 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 780
Query: 781 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 840
QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV
Sbjct: 781 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 840
Query: 841 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 900
ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP
Sbjct: 841 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 900
Query: 901 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 960
SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS
Sbjct: 901 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 960
Query: 961 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 1020
RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR
Sbjct: 961 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 1020
Query: 1021 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 1080
FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN
Sbjct: 1021 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 1080
Query: 1081 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1140
YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL
Sbjct: 1081 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1140
Query: 1141 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1200
GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA
Sbjct: 1141 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1200
Query: 1201 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1260
ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND
Sbjct: 1201 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1260
Query: 1261 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1320
PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA
Sbjct: 1261 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1320
Query: 1321 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1374
EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK
Sbjct: 1321 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1374
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 2791 bits (7236), Expect = 0.0
Identities = 1336/1374 (97%), Positives = 1336/1374 (97%), Gaps = 37/1374 (2%)
Query: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS
Sbjct: 1 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 60
Query: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM
Sbjct: 61 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
Query: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
Sbjct: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
Query: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
Sbjct: 181 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 240
Query: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS
Sbjct: 241 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 300
Query: 301 PSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK 360
PSLERSYKKEYKRSG RSPSREK
Sbjct: 301 PSLERSYKKEYKRSGS-------------------------------------RSPSREK 323
Query: 361 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 420
KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN
Sbjct: 324 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 383
Query: 421 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 480
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
Sbjct: 384 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 443
Query: 481 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 540
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
Sbjct: 444 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 503
Query: 541 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 600
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI
Sbjct: 504 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 563
Query: 601 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 660
FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY
Sbjct: 564 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 623
Query: 661 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 720
DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA
Sbjct: 624 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 683
Query: 721 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 780
NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA
Sbjct: 684 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 743
Query: 781 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 840
QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV
Sbjct: 744 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 803
Query: 841 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 900
ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP
Sbjct: 804 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 863
Query: 901 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 960
SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS
Sbjct: 864 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 923
Query: 961 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 1020
RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR
Sbjct: 924 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 983
Query: 1021 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 1080
FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN
Sbjct: 984 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 1043
Query: 1081 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1140
YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL
Sbjct: 1044 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1103
Query: 1141 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1200
GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA
Sbjct: 1104 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1163
Query: 1201 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1260
ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND
Sbjct: 1164 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1223
Query: 1261 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1320
PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA
Sbjct: 1224 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1283
Query: 1321 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1374
EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK
Sbjct: 1284 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1337
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 89.4 bits (220), Expect = 2e-17
Identities = 104/369 (28%), Positives = 128/369 (34%), Gaps = 92/369 (24%)
Query: 19 PRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDF 78
P+G G G P A P R P P P P P P PP P
Sbjct: 198 PQGGRGRGRFPGAV---PGGDRFPGPAGPG------GPPPPFPAGQTPPRPPLGPPGPPG 248
Query: 79 VPFPPP----MPPSAQGP-----LPPCPI--------RPPFPNHQMRHPFPVPPCFPPMP 121
P PPP +PP GP PP P+ +PP P PVP PP
Sbjct: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPG 308
Query: 122 PPMPCPNNPP----VPGAPPGQGTFPF-MMPPPSMPHPPP----------PPVMPQQVN- 165
PP P PP P PPG P + PPP +P PPP P P N
Sbjct: 309 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNS 368
Query: 166 ---------------YQYPPGYSHHNFPPP--------------SFNSFQNNPSSFLPSA 196
Y PP Y ++ PP F N + SA
Sbjct: 369 GMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSA 428
Query: 197 -----NNSSSPHF--------RHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
+++S+ + + K ++ R + D H S G
Sbjct: 429 ISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYG-- 486
Query: 244 HRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSL 303
S RRER R D R SR +S + R+ RH Y R R RERERHR RD R
Sbjct: 487 --SGSRRERSRERDHSR--SREKSRRHKSRSRDRHDDYYRERSRERERHRDRD--RDRDR 540
Query: 304 ERSYKKEYK 312
ER ++EY+
Sbjct: 541 ERDREREYR 549
Score = 88.2 bits (217), Expect = 5e-17
Identities = 94/339 (27%), Positives = 122/339 (35%), Gaps = 66/339 (19%)
Query: 19 PRGRGGH------GARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFL 72
P G GG G P P P PP Q P + P P P
Sbjct: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLF 279
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIR--PPFPNHQMRHPFPVPPCFPPMPP-----PMP 125
P +P P P+PP GP PP P PP P + P P P FPP PP P+
Sbjct: 280 PGQPFGQPPLGPLPP---GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLT 336
Query: 126 CPNNPPVPGAPPGQG-----TFPFMMPPPSMPHPP------PPPVMPQQVNYQYPPGYSH 174
P +PG PPG P PPP+ P PPP P Y PP Y
Sbjct: 337 LAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP----YGRPPPYDR 392
Query: 175 HNFPPPS--------------FNSFQNNPSSFLPSA-----NNSSSPHFRH--------L 207
++ PP F N + SA +++S+ + +
Sbjct: 393 GDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAI 452
Query: 208 PPYPLPKAPSERRSPERLKHYDDHRH--RDHSHGRGERHRSLDRRERGRSPDR-RRQDSR 264
K ++ R + D H S+G G R R+ RS ++ RR SR
Sbjct: 453 SLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRERSRERDHSRSREKSRRHKSR 512
Query: 265 YRSDYD-----RGRTPSRHRSYERSRERERERHRHRDNR 298
R +D R R RHR +R R+RER+R R +R
Sbjct: 513 SRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR 551
>gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens]
Length = 588
Score = 84.0 bits (206), Expect = 9e-16
Identities = 74/222 (33%), Positives = 93/222 (41%), Gaps = 34/222 (15%)
Query: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYS 173
PP FPP PP P P +P PP T P ++PPP +P PPP P PPG
Sbjct: 342 PPFFPPGAPPTHLPPPPFLP-PPPTVSTAPPLIPPPGIPITVPPPGFPP------PPG-- 392
Query: 174 HHNFPPPS-FNSFQNNPSSFLPSANNSSSPH----FRHLPPYPLPKAPS----------- 217
PPPS + ++ SS S + + P+ F HLP P PS
Sbjct: 393 ---APPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPG-SAPSWPSLVDTSKQWDYY 448
Query: 218 ERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR-TPS 276
RR +R + D R RD R ER R+ RER R D S + SD +R R
Sbjct: 449 ARREKDRDRERDRDRERDRDRDR-ERERT---RERERERDHSPTPSVFNSDEERYRYREY 504
Query: 277 RHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRSY 318
R YER R + RHR+ R E +K S R +
Sbjct: 505 AERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRH 546
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 84.0 bits (206), Expect = 9e-16
Identities = 74/231 (32%), Positives = 97/231 (41%), Gaps = 38/231 (16%)
Query: 21 GRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVP 80
G+ G G APS R N + P PP P +T+ ++ A PPRP+
Sbjct: 120 GKTGQGPGSRAPSPRLPNKTISGPLIPPAS-----PRLGNTSEAHGAART-APPRPNVPA 173
Query: 81 FPPPMPPSAQGPLPP-----CPIR-----PPFPNHQMRHPFPVPP--CFPPMPPPMPCPN 128
PPP PP PLPP PI+ PP P + P PP C PP PPP P P
Sbjct: 174 PPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPT 233
Query: 129 NPPVPGAP--PGQGTFPFMMPPPSMPHPPPPPVMP-------------QQVNYQYPPGYS 173
PP+P A + P + P P PPP P++P + Q PP
Sbjct: 234 PPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPP 293
Query: 174 HHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPER 224
P S + + P+ LP N+SS PP P PK+PS + P++
Sbjct: 294 PPLPPYASCSPRASLPAPPLPGVNSSSETP----PPLP-PKSPSFQAPPQK 339
Score = 55.1 bits (131), Expect = 5e-07
Identities = 58/199 (29%), Positives = 68/199 (34%), Gaps = 70/199 (35%)
Query: 25 HGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPA------------PNFL 72
HGA +AP RP N+ P PP PP PS++ +P P
Sbjct: 159 HGAARTAPP-RP-NVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVA 216
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPC------------------PIRPPFP----------- 103
PP P P PPP PP PLPP PI PP P
Sbjct: 217 PPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLK 276
Query: 104 ------NHQMRHPFPVPPCFPPMPPPMPCPNN-----PPVPGA-------PPGQGTFPFM 145
+ P P PP PP+PP C PP+PG PP P
Sbjct: 277 AEPASPAQDAQEP-PAPP--PPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSF 333
Query: 146 MPPP------SMPHPPPPP 158
PP ++P PP PP
Sbjct: 334 QAPPQKAGAQALPAPPAPP 352
Score = 48.9 bits (115), Expect = 3e-05
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 35/134 (26%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSP-----APNFLPPRPDFVPFPPPM--------PPS-- 88
P PP PP P++ S+ AP LPP P +P PP P S
Sbjct: 224 PPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPA 283
Query: 89 --AQGPLPPCPIRPPFPNHQMRHPFPVPPCF---------PPMPPPMPCPNNPP------ 131
AQ P P P PP+ + R P PP PP+PP P PP
Sbjct: 284 QDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQ 343
Query: 132 ---VPGAPPGQGTF 142
P APPG F
Sbjct: 344 ALPAPPAPPGSQPF 357
Score = 36.2 bits (82), Expect = 0.22
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 110 PFPVPPCFPPMPPPMPCPNNPPVPGAPP 137
P P PP PP PPP+ P PP P APP
Sbjct: 4 PPPPPPPLPPPPPPLGAP-PPPPPSAPP 30
Score = 35.4 bits (80), Expect = 0.38
Identities = 21/41 (51%), Positives = 22/41 (53%), Gaps = 13/41 (31%)
Query: 112 PVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMP 152
PVPP P PPP+P P PP GAPP PPPS P
Sbjct: 2 PVPP---PPPPPLPPP--PPPLGAPP--------PPPPSAP 29
Score = 32.7 bits (73), Expect = 2.5
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 23/54 (42%)
Query: 79 VPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
+P PPP PP PLPP P PP P PPP P+ PPV
Sbjct: 1 MPVPPPPPP----PLPP----------------PPPPLGAPPPPP---PSAPPV 31
Score = 32.3 bits (72), Expect = 3.2
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 120 MPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYS 173
MP P P P PP+P PP P PPP P PP + P G S
Sbjct: 1 MPVPPPPP--PPLPPPPP-----PLGAPPPPPPSAPPVSTDTSSLRRADPKGRS 47
Score = 32.0 bits (71), Expect = 4.2
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 14/43 (32%)
Query: 119 PMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMP 161
P+PPP P PP+P PP P P PPPP P
Sbjct: 2 PVPPPPP----PPLPPPPP----------PLGAPPPPPPSAPP 30
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 79.3 bits (194), Expect = 2e-14
Identities = 58/160 (36%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 26 GARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPP-- 83
GA +AP+ P L PQ P PP P P +PPRP P PP
Sbjct: 221 GAYYAAPALDPALCVHLVPQLP------RPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMA 274
Query: 84 PMPP-SAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMP--PPM-PCPNNPPVPGAPPGQ 139
P+PP S P+PP P P P P P P P+P PPM P P PP+ PPG
Sbjct: 275 PVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGP 334
Query: 140 GTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPP 179
PP P PP PP+ P PPG PP
Sbjct: 335 PMARVPPGPPMAPLPPGPPMAP------LPPGPPMAPLPP 368
Score = 66.2 bits (160), Expect = 2e-10
Identities = 49/138 (35%), Positives = 57/138 (41%), Gaps = 21/138 (15%)
Query: 32 PSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNS----PAPNF--LPPRPDFVPFP--P 83
P P+ + P +PP+ PP AP S P P +PP P P P P
Sbjct: 250 PPMPPRPPMVPMPPRPPIAPM--PPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWP 307
Query: 84 PMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFP 143
PM P GP P P+ PP P P P PP PP P P PP+ PPG
Sbjct: 308 PMAPVPTGP-PMAPV-PPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPG----- 360
Query: 144 FMMPPPSMPHPPPPPVMP 161
PP P PP PP+ P
Sbjct: 361 ----PPMAPLPPGPPMAP 374
Score = 42.7 bits (99), Expect = 0.002
Identities = 26/79 (32%), Positives = 28/79 (35%)
Query: 55 PPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP 114
PP P P +PP P PP P + P PP PP P P P
Sbjct: 304 PPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPM 363
Query: 115 PCFPPMPPPMPCPNNPPVP 133
PP PP P P VP
Sbjct: 364 APLPPGPPMAPLPPRSHVP 382
Score = 32.3 bits (72), Expect = 3.2
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPP 95
P PP+ PP P P LPP P P PP PP A PLPP
Sbjct: 331 PPGPPMARV--PPGPPMAPLPPGPPMAPLPPGPPMAPLPPG-PPMA--PLPP 377
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 78.6 bits (192), Expect = 4e-14
Identities = 68/198 (34%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 44 PQQPPVQ-YQYEPPSAPSTTFSNSPAPNFLP-----PRPDF----VPFPPPMPPSAQGPL 93
PQ PP+Q + PP P + P P LP P P +P PPP+P +A P
Sbjct: 897 PQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPP 956
Query: 94 PPCP-----IRPPFPNHQMRHPFPVPPCFPPMPPPMPC---PNNPPVPGA---PPGQGTF 142
PP P + PP P + P P+P P PPP+P P PP+PGA PP
Sbjct: 957 PPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1016
Query: 143 PFMMPPPSMPHP--PPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSS 200
+ PPP +P PPPP +P PP PPP P LP A
Sbjct: 1017 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1076
Query: 201 SPHFRHL---PPYPLPKA 215
P PP PLP A
Sbjct: 1077 PPPLPGAGIPPPPPLPGA 1094
Score = 72.4 bits (176), Expect = 3e-12
Identities = 62/190 (32%), Positives = 74/190 (38%), Gaps = 23/190 (12%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF----LPPRPDF----VPFPPPMPPSAQGPLPP 95
P PP+ PP P P P +PP P +P PPP+P + P PP
Sbjct: 976 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1035
Query: 96 CPIR-----PPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPS 150
P PP P + P P+P P PPP+P PP P PG G + PPP
Sbjct: 1036 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL-PGAG----IPPPPP 1090
Query: 151 MPHP--PPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHL- 207
+P PPPP +P PP PPP P LP A P +
Sbjct: 1091 LPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVG 1150
Query: 208 --PPYPLPKA 215
PP PLP A
Sbjct: 1151 IPPPPPLPGA 1160
Score = 66.6 bits (161), Expect = 2e-10
Identities = 55/170 (32%), Positives = 67/170 (39%), Gaps = 33/170 (19%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF----LPPRPDF----VPFPPPMPPSAQGPLPP 95
P PP+ PP P P P +PP P +P PPP+P P PP
Sbjct: 1097 PPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPP 1156
Query: 96 CPIR-----PPFPNHQMRHPFPVPPCFPPMPPPMPC---PNNPPVPGAP-------PGQG 140
P PP P + P P+P P PPP+P P PP+PGA PG G
Sbjct: 1157 LPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMG 1216
Query: 141 TFPF---MMPPPSMPHPPP-------PPVMPQQVNYQYPPGYSHHNFPPP 180
P +PPP PPP PP++PQ + P PPP
Sbjct: 1217 IPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPP 1266
Score = 59.7 bits (143), Expect = 2e-08
Identities = 63/199 (31%), Positives = 73/199 (36%), Gaps = 38/199 (19%)
Query: 46 QPP----VQYQYEPPSAPSTTFSNS---PAPNFLP--------PRPDFVPFPPPMPPSAQ 90
QPP ++Q + S+ F NS P+P LP P VP PPP P
Sbjct: 828 QPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMT 887
Query: 91 GPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPF------ 144
P P P P P PP PPP+P PP P P G G P
Sbjct: 888 VPTLPSTAIPQPP------PLQGTEMLPPPPPPLPGAGIPPPPPLP-GAGILPLPPLPGA 940
Query: 145 -MMPPPSMPH---PPPPPVMPQQVNYQYP-PGYSHHNFPPPSFNSFQNNPSSFLPSANNS 199
+ PPP +P PPPPP+ + P PG PPP P LP A
Sbjct: 941 GIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIP--PPPPLPGAGIPPPPPLPGAGIP 998
Query: 200 SSPHFRHL---PPYPLPKA 215
P PP PLP A
Sbjct: 999 PPPPLPGAGIPPPPPLPGA 1017
Score = 45.4 bits (106), Expect = 4e-04
Identities = 46/151 (30%), Positives = 56/151 (37%), Gaps = 24/151 (15%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNF-- 71
PG G P GA P P R+ P PP+ PP P P P
Sbjct: 1125 PGAGIPPPPPLPGAGIPPPPPLP---RVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1181
Query: 72 --LPPRPDF----VPFPPPMPPSAQGPLPPCPIR--PPFPNHQMRHPFPVPPCFPPMPPP 123
+PP P +P PPP+P + P PP P PP P P+PP +PPP
Sbjct: 1182 VGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAP------PLPPPGTGIPPP 1235
Query: 124 MPCPNNPPVPGAPPGQGTFPF-----MMPPP 149
P + P G T P +PPP
Sbjct: 1236 PLLPVSGPPLLPQVGSSTLPTPQVCGFLPPP 1266
Score = 32.3 bits (72), Expect = 3.2
Identities = 29/117 (24%), Positives = 40/117 (34%), Gaps = 24/117 (20%)
Query: 120 MPPPMPCPNNPPVP-GAPPGQGT------------------FPFMMPPPSMPHPPPPPVM 160
+PP P PP P GA G T P S+ PPPPP +
Sbjct: 757 LPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSL 816
Query: 161 PQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPS 217
P H+ S +++ SS ++ N SP PP P ++ S
Sbjct: 817 LWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSP-----PPLPCTESSS 868
>gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens]
Length = 520
Score = 77.8 bits (190), Expect = 7e-14
Identities = 68/211 (32%), Positives = 86/211 (40%), Gaps = 21/211 (9%)
Query: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPP--PPPVMPQQVNYQYPPG 171
PP FPP PP P P +P PP T P ++PPP P PP PPP + + + G
Sbjct: 283 PPFFPPGAPPTHLPPPPFLP-PPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSG 341
Query: 172 Y---SHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHY 228
Y S FP + N LP S+P + L RR +R +
Sbjct: 342 YDSRSARAFP------YGNVAFPHLP----GSAPSWPSLVDTSKQWDYYARREKDRDRER 391
Query: 229 DDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR-TPSRHRSYERSRER 287
D R RD R ER R+ RER R D S + SD +R R R YER R
Sbjct: 392 DRDRERDRDRDR-ERERT---RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRAS 447
Query: 288 ERERHRHRDNRRSPSLERSYKKEYKRSGRSY 318
+ RHR+ R E +K S R +
Sbjct: 448 REKEERHRERRHREKEETRHKSSRSNSRRRH 478
>gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens]
Length = 594
Score = 77.8 bits (190), Expect = 7e-14
Identities = 68/211 (32%), Positives = 86/211 (40%), Gaps = 21/211 (9%)
Query: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPP--PPPVMPQQVNYQYPPG 171
PP FPP PP P P +P PP T P ++PPP P PP PPP + + + G
Sbjct: 357 PPFFPPGAPPTHLPPPPFLP-PPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSG 415
Query: 172 Y---SHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHY 228
Y S FP + N LP S+P + L RR +R +
Sbjct: 416 YDSRSARAFP------YGNVAFPHLP----GSAPSWPSLVDTSKQWDYYARREKDRDRER 465
Query: 229 DDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGR-TPSRHRSYERSRER 287
D R RD R ER R+ RER R D S + SD +R R R YER R
Sbjct: 466 DRDRERDRDRDR-ERERT---RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRAS 521
Query: 288 ERERHRHRDNRRSPSLERSYKKEYKRSGRSY 318
+ RHR+ R E +K S R +
Sbjct: 522 REKEERHRERRHREKEETRHKSSRSNSRRRH 552
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
sapiens]
Length = 1125
Score = 77.8 bits (190), Expect = 7e-14
Identities = 92/297 (30%), Positives = 111/297 (37%), Gaps = 47/297 (15%)
Query: 24 GHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFS-NSPAPNFLPPRPDFVPF- 81
G P+AP+ P P PV AP +P+ L RP +P
Sbjct: 784 GSAVPPAAPTNLPTP-----PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 838
Query: 82 -PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM----PCPNNPPV--PG 134
PP MPP P P RP P+ R P P P F MPPP P P + P PG
Sbjct: 839 RPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-AMPPPHGMKGPFPPHGPFVRPG 897
Query: 135 APPGQGTFPFMMP-----------PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
PG G P P PP P P P PQQ Q PPP+
Sbjct: 898 GMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPT-- 954
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
Q P F N + F + RRS D R+ + + R
Sbjct: 955 --QQQPQQF----RNDNRQQFNS----GRDQERFGRRSFGNRVENDRERYGNRNDDRDNS 1004
Query: 244 HRSLDRRERG-RSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRR 299
+R DRRE G RSPDR R+R +R R S HR ER R+RE R ++ R
Sbjct: 1005 NR--DRREWGRRSPDR----DRHRDLEERNRRSSGHRDRERD-SRDRESRREKEEAR 1054
Score = 62.4 bits (150), Expect = 3e-09
Identities = 87/305 (28%), Positives = 106/305 (34%), Gaps = 30/305 (9%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF-LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF 102
P QP Q PP T F F P+ V +A P PP
Sbjct: 238 PTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPA 297
Query: 103 PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQ 162
P + P P PPP P PG G M P H P+
Sbjct: 298 PTATV--PAAAAPAAASPPPPQ-------APFGFPGDG----MQQPAYTQHQNMDQFQPR 344
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
+ Q P HH P P P + P PP P S +
Sbjct: 345 MMGIQQDP--MHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 402
Query: 223 ERLK---HYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHR 279
E L H + +RH S +R+ R RS R + R RS R SRHR
Sbjct: 403 EPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRR--SRHR 460
Query: 280 SYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRSYGL-SVVPEPAG-CTPEL-PGE 336
RSR R R+R RH + RS S ER +E +R R GL V PE A C+ L G+
Sbjct: 461 ---RSRSRSRDRRRH--SPRSRSQERR-DREKERERRQKGLPQVKPETASVCSTTLWVGQ 514
Query: 337 IIKNT 341
+ K T
Sbjct: 515 LDKRT 519
Score = 61.2 bits (147), Expect = 6e-09
Identities = 92/356 (25%), Positives = 123/356 (34%), Gaps = 86/356 (24%)
Query: 43 HPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPP-------PM--PPSAQGPL 93
H PPV +PP+ T P P F P P P PP PM PP P
Sbjct: 685 HQPGPPVVGALQPPAF--TPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPG 742
Query: 94 PPCPIRPPF---PNHQMRHPFP----------------------VPPCFP---PMPPPMP 125
PP PI PP P H P VPP P P PP
Sbjct: 743 PPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQ 802
Query: 126 CPNNPPVPGAPPGQ------------GTFPFMMP---PPSMPHP--------PPPPVMPQ 162
+ G PG G P ++P PP MP P PP P+ P
Sbjct: 803 PVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPH 862
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
++ PPG PPP P P P P P P P +R
Sbjct: 863 MMHRGPPPGPGGFAMPPPHGMKGPFPPHG--PFVRPGGMPGLG--GPGPGPGGPEDRDGR 918
Query: 223 ERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSD----YDRGRTPSR- 277
++ + + + + ++ + + P ++Q ++R+D ++ GR R
Sbjct: 919 QQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERF 978
Query: 278 -HRSY----ERSRERERERHRHRDN---------RRSPSLERSYKKEYKRSGRSYG 319
RS+ E RER R+ RDN RRSP +R E +R+ RS G
Sbjct: 979 GRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLE-ERNRRSSG 1033
Score = 52.4 bits (124), Expect = 3e-06
Identities = 48/150 (32%), Positives = 57/150 (38%), Gaps = 44/150 (29%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPP--MPPPMPCPNNPPVPGA-P 136
P P P+P P+PP P+ P P PP +PP P PPV GA
Sbjct: 657 PIPKPLPV----PVPPIPV-------------PAPITVPPPQVPPHQP---GPPVVGALQ 696
Query: 137 PGQGTFPFMMPPPSM-----PHPPPPPVMPQQVNYQY-PPGYSHHNFPPPSFNSFQNNPS 190
P T P +PPP P PPPPP + N + PPG+ PPP P
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI-----TPPV 751
Query: 191 SFLPSANNSSSPHFRHLPPYPLPKAPSERR 220
S P H PP +P S R
Sbjct: 752 SIPPP----------HTPPISIPNLVSGAR 771
Score = 52.0 bits (123), Expect = 4e-06
Identities = 46/127 (36%), Positives = 56/127 (44%), Gaps = 20/127 (15%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P++P + + S T SP P LP VP PP +P A +PP P P
Sbjct: 634 PKKPENEVAQNGGAETSHTEPVSPIPKPLP-----VPVPP-IPVPAPITVPP----PQVP 683
Query: 104 NHQMRHPFP---VPPCFPP---MPPPMPCPNNPPVPGAPP--GQGTFPFMMPPPSMPHP- 154
HQ P PP F P +PPP P PP P PP G P +PP +P P
Sbjct: 684 PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLP-PG 742
Query: 155 PPPPVMP 161
PPPP+ P
Sbjct: 743 PPPPITP 749
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P R G P P +PQ PQQP Q Q +PP S P P
Sbjct: 907 PGPGGPEDRDGRQQPPQQPQQQPQPQA---PQQPQQQQQQQPPP------SQQPPPTQQQ 957
Query: 74 PR 75
P+
Sbjct: 958 PQ 959
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
sapiens]
Length = 1132
Score = 77.8 bits (190), Expect = 7e-14
Identities = 92/297 (30%), Positives = 111/297 (37%), Gaps = 47/297 (15%)
Query: 24 GHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFS-NSPAPNFLPPRPDFVPF- 81
G P+AP+ P P PV AP +P+ L RP +P
Sbjct: 791 GSAVPPAAPTNLPTP-----PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 845
Query: 82 -PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM----PCPNNPPV--PG 134
PP MPP P P RP P+ R P P P F MPPP P P + P PG
Sbjct: 846 RPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-AMPPPHGMKGPFPPHGPFVRPG 904
Query: 135 APPGQGTFPFMMP-----------PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
PG G P P PP P P P PQQ Q PPP+
Sbjct: 905 GMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPT-- 961
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
Q P F N + F + RRS D R+ + + R
Sbjct: 962 --QQQPQQF----RNDNRQQFNS----GRDQERFGRRSFGNRVENDRERYGNRNDDRDNS 1011
Query: 244 HRSLDRRERG-RSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRR 299
+R DRRE G RSPDR R+R +R R S HR ER R+RE R ++ R
Sbjct: 1012 NR--DRREWGRRSPDR----DRHRDLEERNRRSSGHRDRERD-SRDRESRREKEEAR 1061
Score = 62.4 bits (150), Expect = 3e-09
Identities = 87/305 (28%), Positives = 106/305 (34%), Gaps = 30/305 (9%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF-LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF 102
P QP Q PP T F F P+ V +A P PP
Sbjct: 223 PTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPA 282
Query: 103 PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQ 162
P + P P PPP P PG G M P H P+
Sbjct: 283 PTATV--PAAAAPAAASPPPPQ-------APFGFPGDG----MQQPAYTQHQNMDQFQPR 329
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
+ Q P HH P P P + P PP P S +
Sbjct: 330 MMGIQQDP--MHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 387
Query: 223 ERLK---HYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHR 279
E L H + +RH S +R+ R RS R + R RS R SRHR
Sbjct: 388 EPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRR--SRHR 445
Query: 280 SYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRSYGL-SVVPEPAG-CTPEL-PGE 336
RSR R R+R RH + RS S ER +E +R R GL V PE A C+ L G+
Sbjct: 446 ---RSRSRSRDRRRH--SPRSRSQERR-DREKERERRQKGLPQVKPETASVCSTTLWVGQ 499
Query: 337 IIKNT 341
+ K T
Sbjct: 500 LDKRT 504
Score = 57.0 bits (136), Expect = 1e-07
Identities = 45/126 (35%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P++P + + S T SP P LP VP PP +P A +PP P P
Sbjct: 619 PKKPENEVAQNGGAETSHTEPVSPIPKPLP-----VPVPP-IPVPAPITVPP----PQVP 668
Query: 104 NHQMRHPFP---VPPCFPP---MPPPMPCPNNPPVPGAPP--GQGTFPFMMPPPSMPHPP 155
HQ P PP F P +PPP P PP P PP G P +PP +P P
Sbjct: 669 PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGP 728
Query: 156 PPPVMP 161
PPP+ P
Sbjct: 729 PPPITP 734
Score = 51.6 bits (122), Expect = 5e-06
Identities = 39/110 (35%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPP--MPPPMPCPNNPPVPGA-P 136
P P P+P P+PP P+ P P PP +PP P PPV GA
Sbjct: 642 PIPKPLPV----PVPPIPV-------------PAPITVPPPQVPPHQP---GPPVVGALQ 681
Query: 137 PGQGTFPFMMPPPSM-----PHPPPPPVMPQQVNYQY-PPGYSHHNFPPP 180
P T P +PPP P PPPPP + N + PPG+ PPP
Sbjct: 682 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 731
Score = 48.9 bits (115), Expect = 3e-05
Identities = 87/381 (22%), Positives = 127/381 (33%), Gaps = 114/381 (29%)
Query: 43 HPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPI---- 98
H PPV +PP+ T P P F P VP PPP PP + P +
Sbjct: 670 HQPGPPVVGALQPPAF--TPPLGIPPPGFGPG----VPPPPPPPPFLRPGFNPMHLPPGF 723
Query: 99 RPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNP----------------PVPGAPPG---- 138
PP P + P +P PP PP+ PN+ P+P G
Sbjct: 724 LPPGPPPPITPPVSIP---PPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGN 780
Query: 139 ---------QGTFPFMMPPPSMPHPP--------------PPPVM-------------PQ 162
G+ P ++P PP P PV+ P
Sbjct: 781 AESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPG 840
Query: 163 QVNYQYPPG-------------------YSHHNFPPPSFNSFQNNPSSFLPSANNSSSPH 203
+ Q PPG + H PPP F P + P
Sbjct: 841 LIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPF 900
Query: 204 FR--HLP----PYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPD 257
R +P P P P P +R ++ + + + + ++ + + P
Sbjct: 901 VRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPP 960
Query: 258 RRRQDSRYRSD----YDRGRTPSR--HRSY----ERSRERERERHRHRDN---------R 298
++Q ++R+D ++ GR R RS+ E RER R+ RDN R
Sbjct: 961 TQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGR 1020
Query: 299 RSPSLERSYKKEYKRSGRSYG 319
RSP +R E +R+ RS G
Sbjct: 1021 RSPDRDRHRDLE-ERNRRSSG 1040
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P R G P P +PQ PQQP Q Q +PP S P P
Sbjct: 914 PGPGGPEDRDGRQQPPQQPQQQPQPQA---PQQPQQQQQQQPPP------SQQPPPTQQQ 964
Query: 74 PR 75
P+
Sbjct: 965 PQ 966
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 77.8 bits (190), Expect = 7e-14
Identities = 92/297 (30%), Positives = 111/297 (37%), Gaps = 47/297 (15%)
Query: 24 GHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFS-NSPAPNFLPPRPDFVPF- 81
G P+AP+ P P PV AP +P+ L RP +P
Sbjct: 806 GSAVPPAAPTNLPTP-----PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 860
Query: 82 -PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM----PCPNNPPV--PG 134
PP MPP P P RP P+ R P P P F MPPP P P + P PG
Sbjct: 861 RPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-AMPPPHGMKGPFPPHGPFVRPG 919
Query: 135 APPGQGTFPFMMP-----------PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
PG G P P PP P P P PQQ Q PPP+
Sbjct: 920 GMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPT-- 976
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGER 243
Q P F N + F + RRS D R+ + + R
Sbjct: 977 --QQQPQQF----RNDNRQQFNS----GRDQERFGRRSFGNRVENDRERYGNRNDDRDNS 1026
Query: 244 HRSLDRRERG-RSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRR 299
+R DRRE G RSPDR R+R +R R S HR ER R+RE R ++ R
Sbjct: 1027 NR--DRREWGRRSPDR----DRHRDLEERNRRSSGHRDRERD-SRDRESRREKEEAR 1076
Score = 62.4 bits (150), Expect = 3e-09
Identities = 87/305 (28%), Positives = 106/305 (34%), Gaps = 30/305 (9%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNF-LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF 102
P QP Q PP T F F P+ V +A P PP
Sbjct: 238 PTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPA 297
Query: 103 PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQ 162
P + P P PPP P PG G M P H P+
Sbjct: 298 PTATV--PAAAAPAAASPPPPQ-------APFGFPGDG----MQQPAYTQHQNMDQFQPR 344
Query: 163 QVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
+ Q P HH P P P + P PP P S +
Sbjct: 345 MMGIQQDP--MHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 402
Query: 223 ERLK---HYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHR 279
E L H + +RH S +R+ R RS R + R RS R SRHR
Sbjct: 403 EPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRR--SRHR 460
Query: 280 SYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRSYGL-SVVPEPAG-CTPEL-PGE 336
RSR R R+R RH + RS S ER +E +R R GL V PE A C+ L G+
Sbjct: 461 ---RSRSRSRDRRRH--SPRSRSQERR-DREKERERRQKGLPQVKPETASVCSTTLWVGQ 514
Query: 337 IIKNT 341
+ K T
Sbjct: 515 LDKRT 519
Score = 57.0 bits (136), Expect = 1e-07
Identities = 45/126 (35%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P++P + + S T SP P LP VP PP +P A +PP P P
Sbjct: 634 PKKPENEVAQNGGAETSHTEPVSPIPKPLP-----VPVPP-IPVPAPITVPP----PQVP 683
Query: 104 NHQMRHPFP---VPPCFPP---MPPPMPCPNNPPVPGAPP--GQGTFPFMMPPPSMPHPP 155
HQ P PP F P +PPP P PP P PP G P +PP +P P
Sbjct: 684 PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGP 743
Query: 156 PPPVMP 161
PPP+ P
Sbjct: 744 PPPITP 749
Score = 51.6 bits (122), Expect = 5e-06
Identities = 39/110 (35%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPP--MPPPMPCPNNPPVPGA-P 136
P P P+P P+PP P+ P P PP +PP P PPV GA
Sbjct: 657 PIPKPLPV----PVPPIPV-------------PAPITVPPPQVPPHQP---GPPVVGALQ 696
Query: 137 PGQGTFPFMMPPPSM-----PHPPPPPVMPQQVNYQY-PPGYSHHNFPPP 180
P T P +PPP P PPPPP + N + PPG+ PPP
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 746
Score = 48.9 bits (115), Expect = 3e-05
Identities = 87/381 (22%), Positives = 127/381 (33%), Gaps = 114/381 (29%)
Query: 43 HPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPI---- 98
H PPV +PP+ T P P F P VP PPP PP + P +
Sbjct: 685 HQPGPPVVGALQPPAF--TPPLGIPPPGFGPG----VPPPPPPPPFLRPGFNPMHLPPGF 738
Query: 99 RPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNP----------------PVPGAPPG---- 138
PP P + P +P PP PP+ PN+ P+P G
Sbjct: 739 LPPGPPPPITPPVSIP---PPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGN 795
Query: 139 ---------QGTFPFMMPPPSMPHPP--------------PPPVM-------------PQ 162
G+ P ++P PP P PV+ P
Sbjct: 796 AESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPG 855
Query: 163 QVNYQYPPG-------------------YSHHNFPPPSFNSFQNNPSSFLPSANNSSSPH 203
+ Q PPG + H PPP F P + P
Sbjct: 856 LIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPF 915
Query: 204 FR--HLP----PYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPD 257
R +P P P P P +R ++ + + + + ++ + + P
Sbjct: 916 VRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPP 975
Query: 258 RRRQDSRYRSD----YDRGRTPSR--HRSY----ERSRERERERHRHRDN---------R 298
++Q ++R+D ++ GR R RS+ E RER R+ RDN R
Sbjct: 976 TQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGR 1035
Query: 299 RSPSLERSYKKEYKRSGRSYG 319
RSP +R E +R+ RS G
Sbjct: 1036 RSPDRDRHRDLE-ERNRRSSG 1055
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P R G P P +PQ PQQP Q Q +PP S P P
Sbjct: 929 PGPGGPEDRDGRQQPPQQPQQQPQPQA---PQQPQQQQQQQPPP------SQQPPPTQQQ 979
Query: 74 PR 75
P+
Sbjct: 980 PQ 981
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 77.4 bits (189), Expect = 9e-14
Identities = 55/160 (34%), Positives = 63/160 (39%), Gaps = 9/160 (5%)
Query: 36 PQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGP--L 93
P+ ++ P PP P P F+ PAP PP P + PPP PP G
Sbjct: 289 PKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPP--PPPPPMIGIPPPPPPVGFGSPGT 346
Query: 94 PPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPH 153
PP P P FP H F PP PP PP P PP P + P G P PPP
Sbjct: 347 PPPPSPPSFPPHP---DFAAPPP-PPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG- 401
Query: 154 PPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFL 193
PPPPP PP S P S + + S L
Sbjct: 402 PPPPPFTGADGQPAIPPPLSDTTKPKSSLPAVSDARSDLL 441
Score = 62.4 bits (150), Expect = 3e-09
Identities = 57/181 (31%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 29 PSAPSFRPQNLR---LLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPM 85
P+ S+ N R L P++ V PP AP P P F PP P PPP
Sbjct: 271 PAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPP-----PAPPPP 325
Query: 86 PPSAQG-PLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPF 144
PP G P PP P+ P P P PP FPP P P PP
Sbjct: 326 PPPMIGIPPPPPPVGFGSPGTP---PPPSPPSFPPHPD-FAAPPPPP------------- 368
Query: 145 MMPPPSMPHP--PPPPV-MPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS 201
PPP+ +P PPPP+ P PP PPP F P + P ++++
Sbjct: 369 --PPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQP-AIPPPLSDTTK 425
Query: 202 P 202
P
Sbjct: 426 P 426
Score = 60.1 bits (144), Expect = 1e-08
Identities = 48/167 (28%), Positives = 56/167 (33%), Gaps = 34/167 (20%)
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMR----------------HPFPVPPC 116
PP P P P ++ LPP P +P R HP P PP
Sbjct: 247 PPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPL 306
Query: 117 FPP-------MPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYP 169
P PPP P P PP+ G PP P P P PP PP P ++ P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPP--PVGFGSPGTPPPPSPPSFPPHPDFAAP 364
Query: 170 PGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
P PPP + P L + P PP P P P
Sbjct: 365 PPP-----PPPPAADYPTLPPPPLSQPTGGAPPP----PPPPPPPGP 402
Score = 60.1 bits (144), Expect = 1e-08
Identities = 50/147 (34%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
P G P G A P AP P + + P PPV + P + S P P+F
Sbjct: 304 PPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA 363
Query: 74 PRPDFVPFPPPMPPSAQGP-LPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
P PPP PP+A P LPP P+ P PP PP PPP P P PP
Sbjct: 364 PP------PPPPPPAADYPTLPPPPLSQPTGG--------APP--PPPPPPPPGPPPPPF 407
Query: 133 PGAPPGQGTFPFMMPPPSMPHPPPPPV 159
GA GQ P + + P P V
Sbjct: 408 TGA-DGQPAIPPPLSDTTKPKSSLPAV 433
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 76.6 bits (187), Expect = 1e-13
Identities = 67/213 (31%), Positives = 79/213 (37%), Gaps = 69/213 (32%)
Query: 53 YEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP-----SAQGPLPPCPIRPPFPN--- 104
++PP+ P S S P L P VP PPP PP SA L P P P P
Sbjct: 684 FKPPTPPVMQ-SQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSA 742
Query: 105 -------HQMRHPFPVPPCFPPMPPPMPCPNNP--------------------------- 130
HQ++H V P PP PPP+P P P
Sbjct: 743 PPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAA 802
Query: 131 ---PVPGAPPG--QGTFPFMMPPPSMPHPP---PPPVMPQQVNYQYPPGYSHHNFPPPSF 182
P P PP Q FP PPS P PP PPP +P+Q ++ PPPS
Sbjct: 803 PPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAK--------PPPS- 853
Query: 183 NSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKA 215
P S +PS + F PP P P A
Sbjct: 854 ------PLSPVPSVVKQIASQF---PPPPTPPA 877
Score = 63.2 bits (152), Expect = 2e-09
Identities = 67/210 (31%), Positives = 78/210 (37%), Gaps = 43/210 (20%)
Query: 44 PQQPPVQYQYEPPSAPST-TFSNSPAPNFLPPRPDFVPF------PPPMPPSAQG-PLPP 95
P PPV PP+ P +F P P+ L P P V PPP PP+ + PL P
Sbjct: 828 PPTPPVPVP--PPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKP 885
Query: 96 CP--IRPPFPNHQMRHP-------------FPVPP-----CFPPMPPPMPCPNNPPVPGA 135
P + P P P FP PP FPP PPP P P PP P
Sbjct: 886 VPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPP-PPPSPVPAPPPPP-- 942
Query: 136 PPGQGTFPFMMPPP-------SMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNN 188
PP P P S P PP PQ+ + + H P P S +
Sbjct: 943 PPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEH--PEPKRPSVDSL 1000
Query: 189 PSSFLPSANNSSSPHFRHLPPYPLPKAPSE 218
S F P A S SP LPP P P +
Sbjct: 1001 VSKFTPPA-ESGSPSKETLPPPAAPPKPGK 1029
Score = 60.1 bits (144), Expect = 1e-08
Identities = 67/217 (30%), Positives = 83/217 (38%), Gaps = 41/217 (18%)
Query: 29 PSAPSFR--PQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPM- 85
PS P F P L++ Q Q PP+ P +P P PP+P V P P
Sbjct: 735 PSLPQFSAPPPPLKIHQVQHIT---QVAPPTPPPPPPIPAPLPPQAPPKP-LVTIPAPTS 790
Query: 86 ------------PPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFP-PMPPP-MP-----C 126
PP+ P+PP +P FP + P PP P P+PPP +P C
Sbjct: 791 TKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIP---PSPPTPPVPVPPPTLPKQQSFC 847
Query: 127 PNNPPVPGAPPGQ------GTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGY-SHHNFPP 179
PP P +P FP PP+M P PV P V Q PP + + P
Sbjct: 848 AKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPV-PANVAPQSPPAVKAKPKWQP 906
Query: 180 PSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
S PS P SS F PP P+P P
Sbjct: 907 SSIPV----PSPDFPPPPPESSLVFPPPPPSPVPAPP 939
Score = 60.1 bits (144), Expect = 1e-08
Identities = 58/189 (30%), Positives = 71/189 (37%), Gaps = 13/189 (6%)
Query: 55 PPSAPSTTFSNSPAPNFLPPRPDF--VPFPPPMPPSAQG---PLPPCPIRP-PFPNHQMR 108
PP P+ PA +++PP P VP PPP P Q PP P+ P P Q+
Sbjct: 808 PPVPPAKKQPAFPA-SYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIA 866
Query: 109 HPFPVPPCFPPMP--PPMPCPNNPPVPGAPPGQGTFPFMMP---PPSMPHPPPPPVMPQQ 163
FP PP P M P P P N P +PP P P P P PPPP
Sbjct: 867 SQFPPPPTPPAMESQPLKPVPANV-APQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSL 925
Query: 164 VNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPE 223
V PP PPP + S P S + P P P+ S +S
Sbjct: 926 VFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSS 985
Query: 224 RLKHYDDHR 232
+H + R
Sbjct: 986 GAEHPEPKR 994
Score = 55.8 bits (133), Expect = 3e-07
Identities = 54/200 (27%), Positives = 64/200 (32%), Gaps = 42/200 (21%)
Query: 52 QYEPPSAPSTTFSNSPAPNFLPP---RPDFV----------PFPPPMPPSAQGPLPPCPI 98
Q E S N P + +PP +P V P PPP PP P PP P
Sbjct: 586 QLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPP 645
Query: 99 RPPFPNHQMRHPFPVPPCF---------------------PPMPPPMPCPNNPPVPGAPP 137
PP P+ P F PP PP M + P PP
Sbjct: 646 PPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPP 705
Query: 138 GQGTFPFMMPPPSMPHPPPPP--VMPQQVNYQYPPGYSHHNFPPPSFNSFQ-NNPSSFLP 194
++PPP P PPP P M Q P + PPP Q + + P
Sbjct: 706 NG-----VVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAP 760
Query: 195 SANNSSSPHFRHLPPYPLPK 214
P LPP PK
Sbjct: 761 PTPPPPPPIPAPLPPQAPPK 780
Score = 50.1 bits (118), Expect = 1e-05
Identities = 48/161 (29%), Positives = 57/161 (35%), Gaps = 36/161 (22%)
Query: 92 PLPPCP-IRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVP--GAPPGQGTFPFMMPP 148
PL P P I P+ Q P P PP PP PPP P P PP+P AP P +
Sbjct: 608 PLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKY 667
Query: 149 PSMPH-------------PPPPPVMPQQ---------VNYQYPPGYSHHNFPPPSFNSFQ 186
++ PP PPVM Q N PP P P Q
Sbjct: 668 STITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQ 727
Query: 187 NNPSSFLPSANNSSSP-------HFRHL----PPYPLPKAP 216
P+ PS S+P +H+ PP P P P
Sbjct: 728 LKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPP 768
Score = 44.3 bits (103), Expect = 8e-04
Identities = 52/207 (25%), Positives = 62/207 (29%), Gaps = 78/207 (37%)
Query: 29 PSAPSFRPQNLRLLH----PQQPPV---QYQYEPPSAPSTTFSNSPAPN-----FLPPRP 76
P+ P+ Q L+ + PQ PP + +++P S P + P P F PP P
Sbjct: 873 PTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPP 932
Query: 77 DFVPFPPPMPPSAQGPLP---------------PCPIRPPFPNHQMR----------HPF 111
VP PPP PP P P P +PP P Q HP
Sbjct: 933 SPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPP-PTPQRNSSIKSSSGAEHPE 991
Query: 112 PVPPCF--------PPMPPPMPCPNNPPVPGAPPGQGTF--------------------- 142
P P PP P P P APP G
Sbjct: 992 PKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPGVLQQGCVSAKAP 1051
Query: 143 -----------PFMMPPPSMPHPPPPP 158
F PP PPPPP
Sbjct: 1052 VLSGRGKDSVVEFPSPPSDSDFPPPPP 1078
Score = 41.2 bits (95), Expect = 0.007
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 23/138 (16%)
Query: 98 IRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPP 157
+ P P ++ P+ PP+PPP P P PP P PP P PS P
Sbjct: 606 VPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPP-------PLPSQSAPSAG 658
Query: 158 PVMPQQVNY------QYPPGYSHHNFPPPS---FNSFQNNPSSFLPSANNSSSPHFRHLP 208
P V Y Q +S F PP+ S P +P N P P
Sbjct: 659 SAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPP--NGVVP-----P 711
Query: 209 PYPLPKAPSERRSPERLK 226
P P P P+ + +LK
Sbjct: 712 PPPPPPPPTPGSAMAQLK 729
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo
sapiens]
Length = 1758
Score = 75.9 bits (185), Expect = 3e-13
Identities = 126/498 (25%), Positives = 178/498 (35%), Gaps = 116/498 (23%)
Query: 56 PSAPST-TFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP 114
PS P+T F P P PP P +P PP +PP P P P +PP + + P
Sbjct: 548 PSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFP-PGQPPPAGYSV-----PP 601
Query: 115 PCFPPMPPPMPCP-----------NNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQ 163
P FPP P + P N P APP F + P
Sbjct: 602 PGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPP-LSREEFYREQRRLKEESKSPYSGS- 659
Query: 164 VNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPE 223
YS ++ S S+ S + S S + PPYP RR
Sbjct: 660 -------SYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYP-------RRGRG 705
Query: 224 RLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYD-RGRTPSRHRSYE 282
+ ++Y R R SHG HRS R RSP RR SR RS RG++P++ +
Sbjct: 706 KSRNY---RSRSRSHG---YHRS-----RSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQ 754
Query: 283 RSRERER-ERHRH-----------------RD---NRRSPSLERSYKKEYKRSGRSYGLS 321
ERE R+R RD R ER Y++ Y++ + Y
Sbjct: 755 GETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKYYKGYAAG 814
Query: 322 VVPEPAGCTPELPGEIIKNTDSWAP----PLEIVNHRSPSREKKRARWEEEKDRWSDNQS 377
P P+ N ++++P PL I N SP +R + + S N
Sbjct: 815 AQPRPSA-----------NRENFSPERFLPLNIRN--SPFTRGRREDYVGGQSHRSRNIG 861
Query: 378 SG-----------KDKNYTSIKEKEPEETMPD------------KNEEEEEELLKPVWIR 414
S K+ T KEKE E D + EE E L P +
Sbjct: 862 SNYPEKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLE 921
Query: 415 CTHSENYYSSDPMDQVGDSTVVGTSR-----LRDL---YDKFEEELGSRQEKAKAARPPW 466
T ++ + + DS V SR +RD + + S ++K + +P
Sbjct: 922 -TSRKSREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPKA 980
Query: 467 EPPKTKLDEDLESSSESE 484
+ KTK D + S+ E
Sbjct: 981 KGDKTKRKNDGSAVSKKE 998
Score = 41.6 bits (96), Expect = 0.005
Identities = 66/317 (20%), Positives = 126/317 (39%), Gaps = 39/317 (12%)
Query: 195 SANNSSSPHFRHLPPYPLPKAPSERRSPER--LKHYDDHRHRDHSHGRGERHRSLDRRER 252
S+N +P+ Y + S +R E+ L D R+ G++++ + R+
Sbjct: 1428 SSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDL 1487
Query: 253 GR-----------SPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSP 301
+ SP R R+ +++ YD R +S +++ ++RE+H
Sbjct: 1488 PKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKSVDKNPCKDREKH--------- 1538
Query: 302 SLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSP--SRE 359
LE KE + Y L+ PE ++ G+I K+T P L + S +RE
Sbjct: 1539 VLEARNNKESSGNKLLYILN-PPETQVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRE 1597
Query: 360 KKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEP----EETMPDKNEEEEEELLKP---VW 412
A +E + + SD++S+ S+KE+E + + DK E+ +E L V
Sbjct: 1598 TDEAAFEPDYNE-SDSESN------VSVKEEESSGNISKDLKDKIVEKAKESLDTAAVVQ 1650
Query: 413 IRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTK 472
+ + ++++ S S +R E S+++K K + + K
Sbjct: 1651 VGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKH 1710
Query: 473 LDEDLESSSESECESDE 489
+ +E E E +
Sbjct: 1711 KKHKKHAGTEVELEKSQ 1727
Score = 38.1 bits (87), Expect = 0.059
Identities = 62/317 (19%), Positives = 119/317 (37%), Gaps = 29/317 (9%)
Query: 211 PLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYD 270
P+ KA E + K + + G + S +E + + ++ + + DY
Sbjct: 1024 PIKKAKEETPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQET--KPVKEEKVKKDYS 1081
Query: 271 RGRTPSRHRSYERSRERERERHRHRDN----RRSPSLERSYKKEYKRSGRSYGLSVVPEP 326
+ + + E ++ E+++ DN R+ + E+ K+++ S V E
Sbjct: 1082 KDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEI 1141
Query: 327 AGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTS 386
+P+ E P + ++ +P+++ K R +K ++N S+
Sbjct: 1142 VKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISN-------- 1193
Query: 387 IKEKEPEETMPDKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVG--------- 437
KEP E + + + ++E +K R SS +D S+ G
Sbjct: 1194 --TKEPSEKLESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEK 1251
Query: 438 TSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSS 497
T R + EE A+ + P++K D+D ESE E D ST SS
Sbjct: 1252 TDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKD---DFESE-EEDVKSTQPISS 1307
Query: 498 DSEVFDVIAEIKRKKAH 514
+ VI + K ++
Sbjct: 1308 VGKPASVIKNVSTKPSN 1324
Score = 36.2 bits (82), Expect = 0.22
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 146 MPPPSMPHPPPPPVMPQQV---------NYQYP---PGYSHHNFPPPSFNSFQNNPSSFL 193
+PPP P PPP P++ + + Q P P S P PS +S +N SS
Sbjct: 336 LPPPPPPIPPPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHPAPSISSLTSNQSSLA 395
Query: 194 P--SANNSSSP 202
P S N SS+P
Sbjct: 396 PPVSGNPSSAP 406
Score = 33.5 bits (75), Expect = 1.4
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 29 PSAPSFRPQNLRLLHP-QQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPM-- 85
P P RP R L P + P+ Q +P P T+ S PAP+ + PP+
Sbjct: 341 PPIPPPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHPAPSISSLTSNQSSLAPPVSG 400
Query: 86 -PPSAQGPLP 94
P SA P+P
Sbjct: 401 NPSSAPAPVP 410
Score = 30.8 bits (68), Expect = 9.3
Identities = 51/237 (21%), Positives = 88/237 (37%), Gaps = 27/237 (11%)
Query: 320 LSVVPEPAGCTPEL---PGEIIKNTDSWAPPLEIVNH--RSPSREKKRARWEEEKDRWSD 374
+S V +PA + P I+K + + P E + + S E + + K+ S
Sbjct: 1305 ISSVGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASS 1364
Query: 375 NQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSENYYS----------S 424
+ KD++Y+ ++++ PE+ E+E L R N+ S S
Sbjct: 1365 EKGKTKDRDYSVLEKENPEKRKNSTQPEKESNL-----DRLNEQGNFKSLSQSSKEARTS 1419
Query: 425 DPMDQVGDSTVVGTSRLRDL---YDKFEEELGSRQ-EKAKAARPPWEPPKTKLDEDLESS 480
D D S+ + RD YD E R+ EK + R P + K D S
Sbjct: 1420 DKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNK---DSASG 1476
Query: 481 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCK 537
+++ + D + DS+ + RK +D N+ + D CK
Sbjct: 1477 QKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKSVDKNPCK 1533
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 75.9 bits (185), Expect = 3e-13
Identities = 90/309 (29%), Positives = 105/309 (33%), Gaps = 63/309 (20%)
Query: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFP-VPPCF--PPMPPPMPCPNNPPVPGAP 136
PF PP +GP PP P F H F PP F PP P P
Sbjct: 513 PFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFD 572
Query: 137 PGQGTFPFMMPPPS------MPHPP----PPPVMPQQVNYQYPP-------------GYS 173
QG FP M PP MPHP PP PQ ++ PP G
Sbjct: 573 YPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPP 632
Query: 174 HHNFPPPSFNS---FQNNPSSFLPSANNSSSPHFRHLPP----YPLPKAPSER--RSPER 224
H N PS + + P+ + ++ L P P P PSER + E
Sbjct: 633 HINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEA 692
Query: 225 LKHYDDHRHRDHSHG--------------RGERHRSLDRRERGRSPDRRRQDSRYRSD-- 268
H +S G R R + ++R G S R R SR RS
Sbjct: 693 FYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSR 752
Query: 269 -----------YDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRS 317
Y R R+ S RSY RSR R R R R RS S RS K Y R
Sbjct: 753 SNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSR-SSRSRSRSQSRSRSKSYSPGRRR 811
Query: 318 YGLSVVPEP 326
S P P
Sbjct: 812 RSRSRSPTP 820
Score = 44.3 bits (103), Expect = 8e-04
Identities = 71/292 (24%), Positives = 91/292 (31%), Gaps = 63/292 (21%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIR--PP 101
P PP P P+T +S P +P ++ P+A GP P P PP
Sbjct: 357 PPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPP 416
Query: 102 FPNHQMRHPFPVPPC---FPPMPPPMPCPNNPPVPGAPP-------------------GQ 139
P PV P PP PP P P P PP GQ
Sbjct: 417 NKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGP-PHCPPWNNSHEGMWGEQRGDPGWNGQ 475
Query: 140 GTFP------------FMMPPPSMPHPPP-------PPV---MPQQVNYQYPPGYSHHNF 177
P F P S PP PP P +PP H F
Sbjct: 476 RDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQF 535
Query: 178 -PPPSFNSFQNNPSSFL----PSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHR 232
PP ++F P F+ P + P + H YP P+E P H+ HR
Sbjct: 536 NQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPH---HHPGHR 592
Query: 233 H-----RDHSHGRGERHRSL---DRRERGRSPDRRRQDSRYRSDYDRGRTPS 276
+H G +H G+ P RRQ + + D P+
Sbjct: 593 MPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPN 644
Score = 42.0 bits (97), Expect = 0.004
Identities = 36/111 (32%), Positives = 41/111 (36%), Gaps = 12/111 (10%)
Query: 82 PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGT 141
PPP PP A P P P P Q PP P P P A +G
Sbjct: 356 PPPAPPPAPAPAPAIP-----PTTQPDD--SKPPIQMPGSSEYEAPGGVQDPAAAGPRGP 408
Query: 142 FPFMMPPPSMP--HPPPPPVMP--QQVNYQYPPGYSHHNFPPPSFNSFQNN 188
P PP+ P P PV P QQ + PP Y HH PP + N+
Sbjct: 409 GPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPP-YPHHQGGPPHCPPWNNS 458
Score = 33.5 bits (75), Expect = 1.4
Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 130 PPVPGAPPGQGTFPFMMPPPSMPHPPPPPV-MPQQVNYQYPPGYSH-----------HNF 177
PP P PP P +PP + P PP+ MP Y+ P G H+
Sbjct: 355 PPPPAPPPAPAPAP-AIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQ 413
Query: 178 PPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211
PP+ + + P P PPYP
Sbjct: 414 IPPNKPPWFDQPHPVAPWGQQQPPEQ----PPYP 443
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 75.1 bits (183), Expect = 4e-13
Identities = 62/187 (33%), Positives = 78/187 (41%), Gaps = 24/187 (12%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPA----PNFLPPRPDFVPFPPPMPPSAQGPLPPCPIR 99
P PPVQ + PP++P + S +P P+ P P PP PP + PP
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 727
Query: 100 PPFPNHQMRHPFPVPPCFPPMPPPM-PCPNNPPVPGAPPGQGTFPFMMPPPSMPHPP--- 155
PP ++ P P PP PPM P P P PP+ APP Q PP S+P P
Sbjct: 728 PPLAAPPLQVP-PSPPASPPMSPSATPPPRVPPLLAAPPLQVP---PSPPASLPMSPLAK 783
Query: 156 PPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKA 215
PPP P + P PP SF + F PSA+ SP P P+A
Sbjct: 784 PPPQAPPAL---ATPPLQALPSPPASF----PGQAPFSPSASLPMSP-----LATPPPQA 831
Query: 216 PSERRSP 222
P +P
Sbjct: 832 PPVLAAP 838
Score = 67.4 bits (163), Expect = 9e-11
Identities = 69/247 (27%), Positives = 86/247 (34%), Gaps = 32/247 (12%)
Query: 29 PSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPR-------PDFVPF 81
P +PS P + PP+Q PP++P + S +P P PP P P
Sbjct: 684 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA 743
Query: 82 PPPMPPSAQGP--------LPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVP 133
PPM PSA P PP + P P P PP P PP + P +P
Sbjct: 744 SPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPP--PQAPPALATPPLQALP 801
Query: 134 GAP---PGQGTF----PFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQ 186
P PGQ F M P + P P PPV+ + Q PP PP+ + Q
Sbjct: 802 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL-LQVPPS-------PPASPTLQ 853
Query: 187 NNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRS 246
P + S S L P P P R L D H + E R
Sbjct: 854 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRG 913
Query: 247 LDRRERG 253
D G
Sbjct: 914 YDSGPEG 920
Score = 65.5 bits (158), Expect = 3e-10
Identities = 64/206 (31%), Positives = 76/206 (36%), Gaps = 32/206 (15%)
Query: 47 PPVQYQYEPPSAPSTTFSNSP---APNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF- 102
PP+Q PP++P + +P APN L PF PP P Q P P P PP
Sbjct: 628 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP-PASPPVS 686
Query: 103 ---------PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP------ 147
P P VPP PP PPM P+ P P APP P +P
Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPS-PPASPPM-SPSATPPPQAPPPLAAPPLQVPPSPPAS 744
Query: 148 PPSMPHPPPPPVMPQQV---NYQYPPG------YSHHNFPPPSF-NSFQNNPSSFLPSAN 197
PP P PPP +P + Q PP S PPP + P LPS
Sbjct: 745 PPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 198 NSSSPHFRHLPPYPLPKAPSERRSPE 223
S P LP +P P+
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQ 830
Score = 57.4 bits (137), Expect = 9e-08
Identities = 58/189 (30%), Positives = 65/189 (34%), Gaps = 56/189 (29%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQP-PVQYQYEPPSAPSTTFSNSPAPNFL 72
P R P RG P AP+ HP QP P Q P P
Sbjct: 252 PARSGPSARG----TPRAPA---------HPSQPKPKGLQALRP------------PQVT 286
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFP--------VPPCFPPMPP-P 123
PPR D P A GPL P+ P P+ P P +P PP PP
Sbjct: 287 PPRKDAAP--------ALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLA 338
Query: 124 MPCPNNPPVPGAPPGQGTFPF------MMPPPSMPHPP--PPPVMPQQVNYQYPPGYSHH 175
P P PP P APP T P PPSM PP PP + PP H
Sbjct: 339 TPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSL-----QTIPPIQVPH 393
Query: 176 NFPPPSFNS 184
+ PS +
Sbjct: 394 SLTSPSLQA 402
Score = 52.0 bits (123), Expect = 4e-06
Identities = 62/217 (28%), Positives = 75/217 (34%), Gaps = 47/217 (21%)
Query: 43 HPQQPPVQYQYEPP-----SAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPL---- 93
H Q P+ PP S + PA PP + PP +A PL
Sbjct: 498 HSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPH 557
Query: 94 ---PPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGT-----FPFM 145
PPCP P P P PP P P P PP +PP QG P
Sbjct: 558 LETPPCPA--PCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLA 615
Query: 146 MPPPSMPH----------PPP---PPVMPQQV-NYQYPPGYSHHNF-----PPPS----- 181
PPP P P P PP+ P + Q P + H PPPS
Sbjct: 616 TPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 675
Query: 182 -FNSFQNNPSSFLPSAN-NSSSPHFRHLPPYPLPKAP 216
F+ + P S PSA S +P PP +P +P
Sbjct: 676 PFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPPSP 710
Score = 39.7 bits (91), Expect = 0.020
Identities = 62/253 (24%), Positives = 79/253 (31%), Gaps = 65/253 (25%)
Query: 29 PSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPR---PDFVPFPP-P 84
PS P P L P PP PS P+T S +P PP P PP
Sbjct: 333 PSPPLATPLPLAPPSPSAPPSLQTL--PSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQ 390
Query: 85 MPPSAQGP---LPPCPIRPPF---------PNHQMRHPF-------------------PV 113
+P S P PP P+ P Q H F
Sbjct: 391 VPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPAST 450
Query: 114 PPCFPPMPPPMPCPNNPPV-----PGAPPGQGTF---PFMMPPPSMPHPPPPPVMPQQVN 165
PP PP+ P+ P +PP+ P P P H P P+ +
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLS----S 506
Query: 166 YQYPPGYSHHNFPPPSFNS---------FQNNPSSFLPSANNSS----SPHFRHLP---P 209
PP + + PPS + +N PS P +S +PH P P
Sbjct: 507 LIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAP 566
Query: 210 YPLPKAPSERRSP 222
PL PS +P
Sbjct: 567 CPLQAPPSPLTTP 579
Score = 32.0 bits (71), Expect = 4.2
Identities = 48/198 (24%), Positives = 65/198 (32%), Gaps = 37/198 (18%)
Query: 31 APSFRPQNLRLLHPQQPPVQYQYEPPSAPS--TTFSNSPAPNFLPPRPDFVPFPPPMPPS 88
APS RP+ PP + + S+ S +T SPA P + P S
Sbjct: 193 APSARPR---------PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLS 243
Query: 89 AQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPP 148
+ P+ P + P P P P P P PP + P + P
Sbjct: 244 SSAT----PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL 299
Query: 149 PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLP 208
S P P P G PPP +N ++ LP+ S P
Sbjct: 300 SSSPLATPS-----------PSGTKARPVPPP------DNAATPLPATLPPSPP-----L 337
Query: 209 PYPLPKAPSERRSPERLK 226
PLP AP +P L+
Sbjct: 338 ATPLPLAPPSPSAPPSLQ 355
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 74.7 bits (182), Expect = 6e-13
Identities = 98/389 (25%), Positives = 142/389 (36%), Gaps = 76/389 (19%)
Query: 21 GRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVP 80
G G R S + R + P + PS P T SP+P PPR P
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSP-APPPRRRRTP 573
Query: 81 FPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQG 140
P PP + P PP R P P R+ P+ + P PPP +PP PP +
Sbjct: 574 TP---PPRRRTPSPPPRRRSPSPR---RYSPPIQRRYSPSPPPKRRTASPP---PPPKRR 624
Query: 141 TFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSS 200
P P + H PPP V + P S S + ++PS A S
Sbjct: 625 ASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS-------SKHRKGSSPSRSTREA-RSP 676
Query: 201 SPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRR 260
P+ RH P P P+AP SP + RR SP RR+
Sbjct: 677 QPNKRH-SPSPRPRAPQTSSSPPPV-----------------------RRGASSSPQRRQ 712
Query: 261 QDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRSYGL 320
S PS SR E ++ + SPS + +R S +
Sbjct: 713 SPS-----------PSTRPIRRVSRTPEPKKIK---KAASPS-----PQSVRRVSSSRSV 753
Query: 321 SVVPEPAGCTPELPGEIIKN---TDSWAPPLEIVNHRSPSREKKRARWEEEKDRWSDNQS 377
S PEPA P P +++ + +W+P + + +SP+ R SD +
Sbjct: 754 SGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTP-------SPSPPRNSDQEG 806
Query: 378 SGKDKNYTSIKEKEPEETMPDKNEEEEEE 406
GK K K+K+ ++ DK ++ ++
Sbjct: 807 GGKKK-----KKKKDKKHKKDKKHKKHKK 830
Score = 49.7 bits (117), Expect = 2e-05
Identities = 58/252 (23%), Positives = 93/252 (36%), Gaps = 17/252 (6%)
Query: 230 DHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPS-RHRSYERSRERE 288
D ++ S + ER RS RR + RSP RR+ S R + R + S RHR+ RS
Sbjct: 155 DKEEKESSREKRERSRS-PRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPA 213
Query: 289 RERHRHRDNRRSPSLERSYKKEYKRSGRSYGLSV-----VPEPAGCTPELPGEIIKNTDS 343
E+ PS++ + + S L V +PEP +PE + K +
Sbjct: 214 PEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEK 273
Query: 344 WAPPLEIVNHRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEE 403
P RS S+ + R R + + ++Y+ + P +
Sbjct: 274 TRP-----RSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTP 328
Query: 404 EEELLKPVWIRCTHS---ENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAK 460
+ P R + S SS + G S+ +SR R K + S K +
Sbjct: 329 PRRMPPPPRHRRSRSPVRRRRRSSASLS--GSSSSSSSSRSRSPPKKPPKRTSSPPRKTR 386
Query: 461 AARPPWEPPKTK 472
P PP+ +
Sbjct: 387 RLSPSASPPRRR 398
Score = 48.5 bits (114), Expect = 4e-05
Identities = 66/298 (22%), Positives = 94/298 (31%), Gaps = 64/298 (21%)
Query: 19 PRGRGGHGARPS------APSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFL 72
PRGR P +PS P R P PP + PS P S SP
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPP---RRRTPSPPPRRRSPSPRRYSP 598
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPP---CFPPMPPPMPCPNN 129
P + + P PPP +A P PP P P + R PP P P ++
Sbjct: 599 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSS 658
Query: 130 PPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPP-------GYSHHNFPPPSF 182
G+ P + T P P+ H P P Q + PP P PS
Sbjct: 659 KHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPST 718
Query: 183 NSFQN----------------NPSSFL----------------------PSANNSSSPHF 204
+ +P S PS S SP
Sbjct: 719 RPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPST 778
Query: 205 RHLPPYPLPKAPSERRSPERLKHYDDH-------RHRDHSHGRGERHRSLDRRERGRS 255
P P+ KA S SP ++ D + +D H + ++H+ + ++ ++
Sbjct: 779 NWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKA 836
Score = 44.7 bits (104), Expect = 6e-04
Identities = 53/203 (26%), Positives = 77/203 (37%), Gaps = 55/203 (27%)
Query: 226 KHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSR 285
K +D RD + E+ S ++RER RSP RR+ R+PS R R
Sbjct: 146 KQDEDKDKRD----KEEKESSREKRERSRSPRRRKS-----------RSPSPRRRSSPVR 190
Query: 286 ERERERH-----RHRDNRRSPSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKN 340
RER+R RHR RSP S PE TPELP +K
Sbjct: 191 -RERKRSHSRSPRHRTKSRSP-------------------SPAPEKKEKTPELPEPSVKV 230
Query: 341 TD-------------SWAPPLEIVNHRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSI 387
+ P I + PS E K ++ E+EK++ + +S + K+ +
Sbjct: 231 KEPSVQEATSTSDILKVPKPEPIPEPKEPSPE-KNSKKEKEKEK-TRPRSRSRSKSRSRT 288
Query: 388 KEKEPEETMPDKNEEEEEELLKP 410
+ + P T P + P
Sbjct: 289 RSRSPSHTRPRRRHRSRSRSYSP 311
Score = 43.9 bits (102), Expect = 0.001
Identities = 56/221 (25%), Positives = 82/221 (37%), Gaps = 31/221 (14%)
Query: 209 PYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPD----RRRQDSR 264
P P PK PS ++ ++ K + R R S + R R RSP RRR SR
Sbjct: 252 PIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRS------RTRSRSPSHTRPRRRHRSR 305
Query: 265 YRSDYDRGRTPSRHRSYERSRERERE-----RHRHRDN--RRSPSLERSYKKEYKRSGRS 317
RS R R R R R R R RHR + RR S S S
Sbjct: 306 SRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSS 365
Query: 318 YGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHR-----SPSREKKRARWEEEKDRW 372
S +P T P + + + S +PP HR +P + + + ++ +R
Sbjct: 366 RSRSPPKKPPKRTSSPPRKTRRLSPSASPPRR--RHRPSPPATPPPKTRHSPTPQQSNRT 423
Query: 373 -------SDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 406
S ++SGK + +++E P + E E
Sbjct: 424 RKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSE 464
Score = 41.6 bits (96), Expect = 0.005
Identities = 60/268 (22%), Positives = 91/268 (33%), Gaps = 31/268 (11%)
Query: 121 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNF--- 177
P P P P P + T P MPPP PV ++ + G S +
Sbjct: 311 PRRRPSPRRRP----SPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSR 366
Query: 178 -------PPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDD 230
PP +S PSA S P RH P P P R SP +
Sbjct: 367 SRSPPKKPPKRTSSPPRKTRRLSPSA---SPPRRRHRPSPPATPPPKTRHSPTPQQSNRT 423
Query: 231 HRHR-----DHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSR 285
+ R + G+ +H+ ++RE + R+ S+ D+G + S ++ R
Sbjct: 424 RKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRR 483
Query: 286 ERERERHRHRDNRRSPSL------ERSYKKE---YKRSGRSYGLSVVPEPAGCTPELPGE 336
+ R+ + + S S +RS+ K +R S S P P E
Sbjct: 484 QYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPR 543
Query: 337 IIKNTDSWAPPLEIVNHRSPSREKKRAR 364
+ PP SP+ +R R
Sbjct: 544 GRRRRSPSPPPTRRRRSPSPAPPPRRRR 571
Score = 40.0 bits (92), Expect = 0.015
Identities = 65/267 (24%), Positives = 91/267 (34%), Gaps = 51/267 (19%)
Query: 261 QDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRSYGL 320
++S+ + ++ R SR RS RSR R R R RR S RSY + S R
Sbjct: 263 KNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRR-- 320
Query: 321 SVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREKKRARWEEEKDRWSDNQSSGK 380
P P TP PP RSP R ++R+ S + SS
Sbjct: 321 ---PSPRRRTP---------PRRMPPPPRHRRSRSPVRRRRRS-----SASLSGSSSSSS 363
Query: 381 DKNYTSIKEKEPEETM--PDKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGT 438
S +K P+ T P K P R H + ++ P T +
Sbjct: 364 SSRSRSPPKKPPKRTSSPPRKTRRLSPSASPP---RRRHRPSPPATPPPKTRHSPTPQQS 420
Query: 439 SRLRD---------LYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSS-------- 481
+R R K + G+ EK ++ P +P K +L E E
Sbjct: 421 NRTRKSRVSVSPGRTSGKVTKHKGT--EKRESPSPAPKPRKVELSESEEDKGGKMAAADS 478
Query: 482 --------ESECESDEDSTCSSSSDSE 500
+S DS SSSS+ E
Sbjct: 479 VQQRRQYRRQNQQSSSDSGSSSSSEDE 505
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.076
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.076
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.076
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/213 (30%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPP 87
RP +P+ + + P PP PP PS ++S + P VP PPP P
Sbjct: 307 RPQSPATGRTPV-FVSPTPPP-----PPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPA 360
Query: 88 SA-QGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMM 146
+A Q P P P P + HP P PP+ PP+ P +PPV A P T P
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAP-----PPIAPPLVQP-SPPVARAAPVCETVPVHP 414
Query: 147 PP----PSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSP 202
P +P PPPPP +P PPG + P + + + PS P+ + + P
Sbjct: 415 LPQGEVQGLPPPPPPPPLP-------PPGIRPSS--PVTVTALAHPPSGLHPTPSTAPGP 465
Query: 203 HFRHLPPYP---LPKAPSERRSPERLKHYDDHR 232
H +PP P + A +R P L D R
Sbjct: 466 HVPLMPPSPPSQVIPASEPKRHPSTLPVISDAR 498
Score = 37.7 bits (86), Expect = 0.076
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 55/159 (34%)
Query: 113 VPPCFPPMPPPM---------------------------------------PCPNNPPVP 133
V P PP PPPM P P PP+P
Sbjct: 273 VRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLP 332
Query: 134 GAPPGQGTFPFM--MPPPSMPHPPPPP--------VMPQQVNYQYPPGYSHHNFPPPSFN 183
A M PPP +P PPPPP V P Q PG H PP +
Sbjct: 333 SALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Query: 184 SFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSP 222
Q +P P A ++P +P +PLP+ + P
Sbjct: 393 LVQPSP----PVAR--AAPVCETVPVHPLPQGEVQGLPP 425
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 73.6 bits (179), Expect = 1e-12
Identities = 69/246 (28%), Positives = 88/246 (35%), Gaps = 63/246 (25%)
Query: 19 PRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPP-------------SAP--STTF 63
P GGHG P + + P PP+ PP S P S +
Sbjct: 402 PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVY 461
Query: 64 SNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFP-PMPP 122
+PP P + PPP PPS Q P PP PP+ Q + P P PP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASST 521
Query: 123 PMPCPNN-------------PP----------VPGAPPGQGTFPFMMP---------PPS 150
P+P N PP PGAP QG P M+P PP
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN-PTMVPLPPGVQPPLPPG 580
Query: 151 MPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPY 210
P PPPPP PPG + + PP +PS+F+ + +PP+
Sbjct: 581 APPPPPPP----------PPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVA----GMPPF 626
Query: 211 PLPKAP 216
+P AP
Sbjct: 627 GMPPAP 632
Score = 48.5 bits (114), Expect = 4e-05
Identities = 56/182 (30%), Positives = 65/182 (35%), Gaps = 46/182 (25%)
Query: 13 HPGRGC--PRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAP----------- 59
H G+G P G P PS +P P P Q Q +PP P
Sbjct: 464 HQGKGMMPPPPMGMMPPPPPPPSGQPPPPPS-GPLPPWQQQQQQPPPPPPPSSSMASSTP 522
Query: 60 ------STTFSNSPAPNFLPP--RPDFVPFPPPMPPSAQG-----PLPPCPIRPPFPNHQ 106
+TT + S +PP + P P QG PLPP ++PP P
Sbjct: 523 LPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP-GVQPPLP--- 578
Query: 107 MRHPFPVPPCFPPMPPP-----MPCPNNPPVPGAPPG-----QGTFPFMMPPPSMPHPPP 156
P PP PP PPP M P PP P P G MPP MP PP
Sbjct: 579 ---PGAPPP--PPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPP 633
Query: 157 PP 158
PP
Sbjct: 634 PP 635
Score = 38.5 bits (88), Expect = 0.045
Identities = 45/139 (32%), Positives = 52/139 (37%), Gaps = 19/139 (13%)
Query: 46 QPPVQYQYEPPSAPSTT-FSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPF-- 102
+ PV S P+TT +++P P P PPP S PP P
Sbjct: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNP-----PPPSLMSTTQSRPPWMNSGPSES 376
Query: 103 -PNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSM-PHPPPPPVM 160
P H M P P P P P P+ G P Q P PPP M P PPP
Sbjct: 377 RPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN-PNGPPPPWMQPPPPPMNQG 435
Query: 161 PQQVNYQYPPGYSHHNFPP 179
P +PPG HH PP
Sbjct: 436 P------HPPG--HHGPPP 446
Score = 36.6 bits (83), Expect = 0.17
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 69 PNFLPPRPDFVPFPPPMPPS-------AQGPLPPCPIRPP-FPNHQMRHPFPVPPCFPPM 120
P PP P P PPP PP A P PP P+ P F +PP P
Sbjct: 571 PGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPP 630
Query: 121 PPPMPCPNN 129
PP P P N
Sbjct: 631 APPPPPPQN 639
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 72.8 bits (177), Expect = 2e-12
Identities = 66/211 (31%), Positives = 77/211 (36%), Gaps = 49/211 (23%)
Query: 55 PPSAP----STTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGP------LPPCPIRP---- 100
PPSAP S+ S P P PP FPPP+PP P +PP P+ P
Sbjct: 217 PPSAPNPVVSSLGSGLPPPGMPPPGS----FPPPVPPPGALPPGIPPAMPPPPMPPGAAG 272
Query: 101 -----------PFPNHQMRHPFPVPPCFPPMP--PPMPCPNNPP-----VPGAPPGQGTF 142
P H HP P PP P P M ++ P PPG G
Sbjct: 273 HGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQ 332
Query: 143 PFMMPPPSMPHPPPPPV-MPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS 201
P PPP MPHP PPP+ MP + PP S P P P +P +
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPP----RGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGP 388
Query: 202 PHFRHL--------PPYPLPKAPSERRSPER 224
P PP P P+ P R P R
Sbjct: 389 PRPPPYGYQRGPLPPPRPTPRPPVPPRGPLR 419
Score = 62.4 bits (150), Expect = 3e-09
Identities = 50/150 (33%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLP 73
PG G P G G P P P HP +Q + P + P P
Sbjct: 281 PGAGHP-GHGHSHPHPFPPGGMP------HPGMSQMQLAHHGPHGLGHPHAGPPGSGGQP 333
Query: 74 PRPDFVPFPPP-MPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
P P PPP MP P+ P PPF + M HP P+PP PPP+ P+
Sbjct: 334 P-----PRPPPGMPHPGPPPMGMPPRGPPFGS-PMGHPGPMPPHGMRGPPPLMPPHGYTG 387
Query: 133 PGAPPGQGTFPFMMPPP-SMPHPPPPPVMP 161
P PP G +PPP P PP PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVPPRGP 417
Score = 58.5 bits (140), Expect = 4e-08
Identities = 49/153 (32%), Positives = 53/153 (34%), Gaps = 28/153 (18%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQ------------- 90
P PP + PPSA T + P P P F P P P +Q
Sbjct: 264 PPMPPGAAGHGPPSA-GTPGAGHPGHGHSHPHP-FPPGGMPHPGMSQMQLAHHGPHGLGH 321
Query: 91 ---GPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP 147
GP PP P M HP P P PP PP P P P P G P +MP
Sbjct: 322 PHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMP 381
Query: 148 PPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 180
P PP PP P GY PPP
Sbjct: 382 PHGYTGPPRPP----------PYGYQRGPLPPP 404
Score = 48.1 bits (113), Expect = 6e-05
Identities = 47/145 (32%), Positives = 60/145 (41%), Gaps = 24/145 (16%)
Query: 88 SAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP 147
+AQ PL RP HQ+ P PP P P + P PG PP G+FP +P
Sbjct: 196 AAQNPLSQAD-RP----HQLFADAPPPPS-APNPVVSSLGSGLPPPGMPP-PGSFPPPVP 248
Query: 148 PP-SMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRH 206
PP ++P P PP MP PPG + H PS+ P A + H H
Sbjct: 249 PPGALP-PGIPPAMPPP---PMPPGAAGH-----------GPPSAGTPGAGHPGHGH-SH 292
Query: 207 LPPYPLPKAPSERRSPERLKHYDDH 231
P+P P S +L H+ H
Sbjct: 293 PHPFPPGGMPHPGMSQMQLAHHGPH 317
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 72.4 bits (176), Expect = 3e-12
Identities = 72/248 (29%), Positives = 89/248 (35%), Gaps = 50/248 (20%)
Query: 35 RPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQG--P 92
RP R P PP + PS P + S+ P PP P P PPP+PPS+ G
Sbjct: 274 RPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPP---PPPPPSRPGPPPLPPSSSGNDE 330
Query: 93 LPPCPIR--------PPFPNHQMRHPFPVPPC-------------FPPMPPPMPCPNNPP 131
P P R PP P+ P P PP P+PPP P N
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGS 390
Query: 132 VPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSF---NSFQNN 188
A P P S P PP+ P + + PP PPPS N FQ++
Sbjct: 391 TSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP------PPPSTSIRNGFQDS 444
Query: 189 PSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLD 248
P + P LPP P P + + P +L R E +
Sbjct: 445 PCEDEWESRFYFHP-ISDLPP-PEPYVQTTKSYPSKL-------------ARNESRSGSN 489
Query: 249 RRERGRSP 256
RRERG P
Sbjct: 490 RRERGAPP 497
Score = 67.8 bits (164), Expect = 7e-11
Identities = 76/246 (30%), Positives = 92/246 (37%), Gaps = 62/246 (25%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYE--PPSAPSTT--FSNSPAP 69
PGR P GH + P PQ R+ P +P V + + PP PST +SP
Sbjct: 147 PGR-FPVPSPGHRSGPP----EPQRNRM-PPPRPDVGSKPDSIPPPVPSTPRPIQSSPHN 200
Query: 70 NFLPP------RPDFVPFPPPMPPSA----------QGPLP---PCPIRPPFPNHQMRHP 110
PP +P P PPP P + Q PL P RPP P R
Sbjct: 201 RGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRAL 260
Query: 111 FPVPPCFPP------------MPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPP 158
PP PP +PPP P N PPVP P + PPP P PPP
Sbjct: 261 DDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPP 320
Query: 159 VMPQQVNYQYPPGYSHHNFPP--PSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
+ PP S ++ P P N ++ + LPS S PLP P
Sbjct: 321 L---------PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSG----------PLPPPP 361
Query: 217 SERRSP 222
SER P
Sbjct: 362 SERPPP 367
Score = 40.0 bits (92), Expect = 0.015
Identities = 48/160 (30%), Positives = 55/160 (34%), Gaps = 29/160 (18%)
Query: 64 SNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPP 123
S P LPP P PPS G P P P H+ PP P
Sbjct: 121 SGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPV-----PSPGHRSG---------PPEPQR 166
Query: 124 MPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
P PP P G+ P +PPP P P P PG P P+
Sbjct: 167 NRMP--PPRPDV----GSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220
Query: 184 SFQNNPSSFL------PSANNSSSPHFRHLPPYPLPKAPS 217
F N + L S +SSSP F + P PLP PS
Sbjct: 221 PFPGNRGTALGGGSIRQSPLSSSSP-FSNRP--PLPPTPS 257
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 72.4 bits (176), Expect = 3e-12
Identities = 72/248 (29%), Positives = 89/248 (35%), Gaps = 50/248 (20%)
Query: 35 RPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQG--P 92
RP R P PP + PS P + S+ P PP P P PPP+PPS+ G
Sbjct: 274 RPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPP---PPPPPSRPGPPPLPPSSSGNDE 330
Query: 93 LPPCPIR--------PPFPNHQMRHPFPVPPC-------------FPPMPPPMPCPNNPP 131
P P R PP P+ P P PP P+PPP P N
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGS 390
Query: 132 VPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSF---NSFQNN 188
A P P S P PP+ P + + PP PPPS N FQ++
Sbjct: 391 TSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP------PPPSTSIRNGFQDS 444
Query: 189 PSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLD 248
P + P LPP P P + + P +L R E +
Sbjct: 445 PCEDEWESRFYFHP-ISDLPP-PEPYVQTTKSYPSKL-------------ARNESRSGSN 489
Query: 249 RRERGRSP 256
RRERG P
Sbjct: 490 RRERGAPP 497
Score = 67.8 bits (164), Expect = 7e-11
Identities = 76/246 (30%), Positives = 92/246 (37%), Gaps = 62/246 (25%)
Query: 14 PGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYE--PPSAPSTT--FSNSPAP 69
PGR P GH + P PQ R+ P +P V + + PP PST +SP
Sbjct: 147 PGR-FPVPSPGHRSGPP----EPQRNRM-PPPRPDVGSKPDSIPPPVPSTPRPIQSSPHN 200
Query: 70 NFLPP------RPDFVPFPPPMPPSA----------QGPLP---PCPIRPPFPNHQMRHP 110
PP +P P PPP P + Q PL P RPP P R
Sbjct: 201 RGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRAL 260
Query: 111 FPVPPCFPP------------MPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPP 158
PP PP +PPP P N PPVP P + PPP P PPP
Sbjct: 261 DDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPP 320
Query: 159 VMPQQVNYQYPPGYSHHNFPP--PSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
+ PP S ++ P P N ++ + LPS S PLP P
Sbjct: 321 L---------PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSG----------PLPPPP 361
Query: 217 SERRSP 222
SER P
Sbjct: 362 SERPPP 367
Score = 40.0 bits (92), Expect = 0.015
Identities = 48/160 (30%), Positives = 55/160 (34%), Gaps = 29/160 (18%)
Query: 64 SNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPP 123
S P LPP P PPS G P P P H+ PP P
Sbjct: 121 SGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPV-----PSPGHRSG---------PPEPQR 166
Query: 124 MPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFN 183
P PP P G+ P +PPP P P P PG P P+
Sbjct: 167 NRMP--PPRPDV----GSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220
Query: 184 SFQNNPSSFL------PSANNSSSPHFRHLPPYPLPKAPS 217
F N + L S +SSSP F + P PLP PS
Sbjct: 221 PFPGNRGTALGGGSIRQSPLSSSSP-FSNRP--PLPPTPS 257
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 72.0 bits (175), Expect = 4e-12
Identities = 45/108 (41%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 55 PPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP 114
PP AP+ P P LP P P PP + PP P PP P Q + P P P
Sbjct: 1422 PPLAPAAAV---PGPPPLPGLPSANSNGTPEPPLLEEKPPPTP--PPAPTPQPQPPPPPP 1476
Query: 115 PCFP--PMPPPM--PCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPP 158
P P P PPP+ P P++PP P PP PPP+MP PPPPP
Sbjct: 1477 PPQPALPSPPPLVAPTPSSPPPPPLPP--------PPPPAMPSPPPPP 1516
Score = 64.7 bits (156), Expect = 6e-10
Identities = 53/164 (32%), Positives = 64/164 (39%), Gaps = 21/164 (12%)
Query: 60 STTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCF-- 117
S+ S P P+ P PP+ P+A P PP P+ P P+ P PP
Sbjct: 1399 SSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPGPP-PL-PGLPSANSNGT-PEPPLLEE 1455
Query: 118 --PPMPPPMPCPNNPPVPGAPPGQGTFP----FMMPPPSMPHPPP-PPVMPQQVNYQYPP 170
PP PPP P P P P PP Q P + P PS P PPP PP P + PP
Sbjct: 1456 KPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP 1515
Query: 171 GYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPK 214
PPP+ P P+A + P P L K
Sbjct: 1516 -------PPPAAAPLAAPPEE--PAAPSPEDPELPDTRPLHLAK 1550
Score = 64.7 bits (156), Expect = 6e-10
Identities = 43/119 (36%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMP-PSAQGPLPPCPIRPPF 102
P PP+ P PS + +P P L +P P PPP P P Q P PP P +P
Sbjct: 1431 PGPPPL------PGLPSANSNGTPEPPLLEEKPP--PTPPPAPTPQPQPPPPPPPPQPAL 1482
Query: 103 PNHQMRHPFPVPPCFPPMPPPMPCPNNP--PVPGAPPGQGTFPFMMPP--PSMPHPPPP 157
P+ P P P PPP+P P P P P PP P PP P+ P P P
Sbjct: 1483 PSPP---PLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDP 1538
Score = 50.1 bits (118), Expect = 1e-05
Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P P Q Q PP P SP P + P P P PPP+PP P P P PP P
Sbjct: 1462 PPAPTPQPQPPPPPPPPQPALPSPPP-LVAPTPSSPP-PPPLPPP---PPPAMPSPPPPP 1516
Query: 104 NHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPP 137
P P PP P P P +P +P P
Sbjct: 1517 -----PPAAAPLAAPPEEPAAPSPEDPELPDTRP 1545
Score = 43.1 bits (100), Expect = 0.002
Identities = 32/94 (34%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Query: 125 PCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNS 184
P P + GA PG TFP + YQ+P + FP PS S
Sbjct: 125 PGPTELFISGALPGSSTFPSSSALSA---------------YQHPASFGSRPFPVPSSLS 169
Query: 185 FQNNPSSFLPSANNSSSPH-FRHLPPYPLPKAPS 217
Q+ P F P AN SPH HL P P PS
Sbjct: 170 LQDPP--FSPPANGLLSPHDVLHLKPSQAPTVPS 201
Score = 42.7 bits (99), Expect = 0.002
Identities = 50/175 (28%), Positives = 64/175 (36%), Gaps = 31/175 (17%)
Query: 52 QYEPPSAPSTTFSNSPAPNFL------PPRPDFVPFPPP-MPPSAQGPLP-PCPIRPPFP 103
Q PP P T S P P+ L P P +P PPP + PS P P P
Sbjct: 761 QKSPPPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVG 820
Query: 104 NHQMRHPFPVPPCFPPMPPPMPCPNNPPVP----------GAPPGQGTFPFMMPPPSMPH 153
H + P P PPP P P PP+P G P + P + P S+
Sbjct: 821 VHLLE---PATRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPS-PRLRPEESL-- 874
Query: 154 PPPPPVMPQQVN--YQYPPGYSHHNFPPPSFNSFQNNPSSFL--PSANNSSSPHF 204
PP M + + PP PP NS +P+ PS + +P F
Sbjct: 875 -DPPGAMQELLGALEPLPPAPGDTGVGPP--NSEGKDPAGAYRSPSPQGTKAPRF 926
Score = 37.4 bits (85), Expect = 0.100
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 128 NNPPVPGAPPGQGTFPFMM-----PPPSMPHPPPPPVMPQQVNYQYPP 170
+ PPVP GQ P PPP P PPP P P++ + PP
Sbjct: 1668 HRPPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPP 1715
Score = 35.0 bits (79), Expect = 0.50
Identities = 48/176 (27%), Positives = 61/176 (34%), Gaps = 29/176 (16%)
Query: 60 STTFSNSPAPNFLPPRPDFV--PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCF 117
S+TF +S A + F PFP P S Q P P PP + + P V
Sbjct: 139 SSTFPSSSALSAYQHPASFGSRPFPVPSSLSLQDP----PFSPPA--NGLLSPHDVLHLK 192
Query: 118 PPMPPPMPCPNNPP--VPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHH 175
P P +P G G PP P PP PP P+ +
Sbjct: 193 PSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHL----------- 241
Query: 176 NFPPPSFNSFQNNPSSFLPSANNSSSP---HFRHLPPYPLPKAPSERRSPERLKHY 228
P FN + SS +A SSP +F P P P + R +KHY
Sbjct: 242 ---PTQFNLLAS--SSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHY 292
Score = 34.3 bits (77), Expect = 0.85
Identities = 39/135 (28%), Positives = 44/135 (32%), Gaps = 24/135 (17%)
Query: 82 PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGT 141
PPP PP+ P CP R + P P PP +P N G
Sbjct: 980 PPPGPPAYDPYGPYCPGRASGAGPET----PGLGLDPNKPPELPSTVNAEPLGLIQSG-- 1033
Query: 142 FPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSS 201
P PP P PPPPP P P F S P L +SS
Sbjct: 1034 -PHQAAPPPPPPPPPPPA---------PASEPKGGLTSPIFCS--TKPKKLL----KTSS 1077
Query: 202 PHF--RHLPPYPLPK 214
H R PP+ PK
Sbjct: 1078 FHLLRRRDPPFQTPK 1092
Score = 32.7 bits (73), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 10/41 (24%)
Query: 118 PPMPPPMPCPNNPPVPGAPPGQGTFPFMMPP--PSMPHPPP 156
PP+ PP P + P G P PP P++PHPPP
Sbjct: 1305 PPLSPPKSVPPSVPARGLQP--------QPPATPAVPHPPP 1337
Score = 32.0 bits (71), Expect = 4.2
Identities = 35/135 (25%), Positives = 43/135 (31%), Gaps = 9/135 (6%)
Query: 32 PSFRPQNLRLLHPQQPPVQYQYEPPSAPSTT-FSNSPAPNFLPPRPDFVPFPPPMPPSAQ 90
P F P LL P + P+ PS+ F L P PP P
Sbjct: 173 PPFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPP 232
Query: 91 GPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM-----PCPNNPPVPGAPPGQGTF--P 143
P PP P P + + P + P PP A P Q T
Sbjct: 233 DPPPP-PRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKH 291
Query: 144 FMMPPPSMPHPPPPP 158
+ P + P PPPPP
Sbjct: 292 YQRPASAQPPPPPPP 306
Score = 32.0 bits (71), Expect = 4.2
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 73 PPRPDFVPFPPPMPPSAQGPLPPCP------IRPP-FPNHQMRHPFPVPPCFPPM--PPP 123
P P + P+ P P A G P P +PP P+ P + P PPP
Sbjct: 982 PGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPP 1041
Query: 124 MPCPNNPPVPGAPPGQG 140
P P PP P + P G
Sbjct: 1042 PPPPPPPPAPASEPKGG 1058
Score = 32.0 bits (71), Expect = 4.2
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 14/69 (20%)
Query: 94 PPCPIRPPFPNHQMRHPFPV-----PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPP 148
PP P+R + Q ++P PP P PPP P PP Q P
Sbjct: 1670 PPVPVRR---SGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQ------TPE 1720
Query: 149 PSMPHPPPP 157
+MP PP P
Sbjct: 1721 TAMPEPPAP 1729
Score = 31.6 bits (70), Expect = 5.5
Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 9/114 (7%)
Query: 38 NLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFL--PPRPDFVPFPPPMPPSAQGPLPP 95
+L L+ P PP APS + S S L P D P PPP PP P+ P
Sbjct: 789 DLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPPPM-P 847
Query: 96 CPIRPPFPNHQMRHPFPVPPCFP--PMPPPMPCPN----NPPVPGAPPGQGTFP 143
+ +H + P P P + PP P+P AP G P
Sbjct: 848 LQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGP 901
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 71.6 bits (174), Expect = 5e-12
Identities = 42/93 (45%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 72 LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM-----PC 126
LPP P +P PPP+P S G L P P PP P P PP PP+PPP P
Sbjct: 645 LPPPPASIPPPPPLP-SGLGSLSPAPPMPPVSAGPPLPPPPPPP--PPLPPPSSAGPPPP 701
Query: 127 PNNPPVPG--APPGQGTFPFMMPPPSMPHPPPP 157
P PP+P APP G P PPP + PPPP
Sbjct: 702 PPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPP 734
Score = 58.9 bits (141), Expect = 3e-08
Identities = 45/120 (37%), Positives = 49/120 (40%), Gaps = 16/120 (13%)
Query: 47 PPVQYQYEPPSAPSTTFSNSPAPNFLP-----PRPDFVPFPPPMPPSAQGPLPPCPIRPP 101
PP PP PS S SPAP P P P P PPP+PP + PP P PP
Sbjct: 647 PPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPP 706
Query: 102 FPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMP 161
PN P PP P PPP P PP APP F + S P P + P
Sbjct: 707 LPNS------PAPPN-PGGPPPAP----PPPGLAPPPPPGLFFGLGSSSSQCPRKPAIEP 755
Score = 40.8 bits (94), Expect = 0.009
Identities = 34/104 (32%), Positives = 37/104 (35%), Gaps = 25/104 (24%)
Query: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFP 103
P PPV P P P + PP P PPP+P S P PP P PP
Sbjct: 669 PPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPP---PPPLPNS---PAPPNPGGPP-- 720
Query: 104 NHQMRHPFPVPPCFPPMPPP----------MPCPNNPPV-PGAP 136
P P PP P PPP CP P + P P
Sbjct: 721 ------PAPPPPGLAPPPPPGLFFGLGSSSSQCPRKPAIEPSCP 758
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 71.6 bits (174), Expect = 5e-12
Identities = 49/123 (39%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 54 EPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPV 113
E PSAP T+ ++ P P + P V P + P+ PLPP P PP P P P
Sbjct: 645 EMPSAPITS-ADCPKPMVVTPGAAAVAAPSVLAPTL--PLPPPPGFPPLPP-----PPPP 696
Query: 114 PPCFP--PMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHP---PPPPVMPQQVNYQY 168
PP P PMPPP+P P PP P P +PPP +P P PPPP++P +
Sbjct: 697 PPPQPGFPMPPPLPPPPPPPPPAHP------AVTVPPPPLPAPPGVPPPPILPPLP--PF 748
Query: 169 PPG 171
PPG
Sbjct: 749 PPG 751
Score = 63.5 bits (153), Expect = 1e-09
Identities = 63/195 (32%), Positives = 76/195 (38%), Gaps = 46/195 (23%)
Query: 56 PSAPSTTFSNSPAPNF-LPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP 114
P A + + AP LPP P F P PPP PP PP P M P P P
Sbjct: 664 PGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPP-----------PPQPGFPMPPPLPPP 712
Query: 115 PCFPPMPPPMPCPNNPPVP-GAPPGQGTFPFMMPPPSMPHPP--PPPVMP-QQVNYQYPP 170
P PP PP P PP P APPG + PPP +P P PP + P QV+ +
Sbjct: 713 P--PPPPPAHPAVTVPPPPLPAPPG------VPPPPILPPLPPFPPGLFPVMQVDMSHVL 764
Query: 171 GYSHHNFPPPSFNSFQNN-----------------PSSFLPSANNSSSPHFRHLPPYPLP 213
G P SFQ P +A S+ F +LPPY P
Sbjct: 765 GGQWGGMP----MSFQMQTQVLSRLMTGQGACPYPPFMAAAAAAASAGLQFVNLPPYRGP 820
Query: 214 KAPSERRSPERLKHY 228
+ S P R +H+
Sbjct: 821 FSLS-NSGPGRGQHW 834
Score = 60.8 bits (146), Expect = 8e-09
Identities = 124/528 (23%), Positives = 178/528 (33%), Gaps = 78/528 (14%)
Query: 27 ARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMP 86
A +APS L L P P PP P F P P LPP P P PPP
Sbjct: 667 AAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGF---PMPPPLPPPP---PPPPPAH 720
Query: 87 PSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPP---PMPCPNNPPVPGAPPGQGTFP 143
P+ P PP P P P P P+ P PP PP P+ + V G G
Sbjct: 721 PAVTVPPPPLPAPPGVP------PPPILPPLPPFPPGLFPVMQVDMSHVLGGQWGGMPMS 774
Query: 144 FMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLP-SANNSSSP 202
F M + +M Q YPP + + F N P P S +NS
Sbjct: 775 FQMQTQVLSR-----LMTGQGACPYPPFMAAAAAAASAGLQFVNLPPYRGPFSLSNSGPG 829
Query: 203 HFRHLPPYPL--PKAPSERRSPER---------------LKHYDDHRHRDHSHGRGE--R 243
+H PP P P P P + LK RD + E
Sbjct: 830 RGQHWPPLPKFDPSVPPPGYMPRQEDPHKATVDGVLLVVLKELKAIMKRDLNRKMVEVVA 889
Query: 244 HRSL----DRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRH----- 294
R+ D++ER S D DR + R S + E +
Sbjct: 890 FRAFDEWWDKKERMAKASLTPVKSGEHKDEDRPKPKDRIASCLLESWGKGEGLGYEGLGL 949
Query: 295 ----RDNRRSPSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEI 350
R R PS + K+ + + P + + E ++ D P E+
Sbjct: 950 GIGLRGAIRLPSFKVKRKEPPDTTSSGDQKRLRPSTSVDEEDEESERERDRDMADTPCEL 1009
Query: 351 VNHRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKP 410
R+ K R + S G++ S+ E++ ++ EEEEEE
Sbjct: 1010 A-----KRDPKGVGVRRRPARPLELDSGGEEDEKESLSEEQESTEEEEEAEEEEEE---- 1060
Query: 411 VWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPK 470
++ D + + T + + +D D EEE S K
Sbjct: 1061 ---EDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETVSIVTS-----------K 1106
Query: 471 TKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRL 518
+ ESS SE ES +S+ SSS D E +V+A + ++ + +
Sbjct: 1107 AEATSSSESSESSEFESSSESSPSSSEDEE--EVVAREEEEEEEEEEM 1152
Score = 57.0 bits (136), Expect = 1e-07
Identities = 55/210 (26%), Positives = 73/210 (34%), Gaps = 36/210 (17%)
Query: 29 PSAPSFRPQNLRLLHPQQPPVQYQYEPP----SAPSTTFSNSPAPNFLPPRPDFVPFPPP 84
P P + LL P+ P + + PP AP P P + P P P PPP
Sbjct: 1226 PEEPGLSQEGAMLLSPEPPAKEVEARPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPPP 1285
Query: 85 MPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPM-----PCPNNPPVPGAPPGQ 139
PP + P PP +H P P+ PP P + + VP P G+
Sbjct: 1286 RPP--RPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQSTETVPATPGGE 1343
Query: 140 -----GTFPFMMPPPSMPHPPPPPVMPQQVNYQYP---PGYSHHNFPPPSFNSFQNNPSS 191
G+ + P +P P + YP P S P F S
Sbjct: 1344 PPLSGGSSGLSLSSPQVPGSP----------FSYPAPSPSLSSGGLPRTPGRDF-----S 1388
Query: 192 FLPSANNSSSPHFRHLPPYPLPKAPSERRS 221
F P+ + S P LP PLP + RS
Sbjct: 1389 FTPTFSEPSGPLL--LPVCPLPTGRRDERS 1416
Score = 42.7 bits (99), Expect = 0.002
Identities = 44/183 (24%), Positives = 63/183 (34%), Gaps = 40/183 (21%)
Query: 11 SFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPN 70
+F P G G S P F+ Q Q + + PP A +T PAP
Sbjct: 345 AFRGSSDLPFGAVGGTGGSSGPPFKAQ-------PQDSATFAHTPPPAQAT-----PAPG 392
Query: 71 FLPPRPDFVPFPPPM---PPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCP 127
F + F P+ P+ PP + P R P P PP+PP P
Sbjct: 393 F---KSAFSPYQTPVAHFPPPPEEPTATAAFGARDSGEFRRAPAP-----PPLPPAEPLA 444
Query: 128 NNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQN 187
P G PPG PPPP ++ + G+S P + ++
Sbjct: 445 KEKP--GTPPG---------------PPPPDTNSMELGGRPTFGWSPEPCDSPGTPTLES 487
Query: 188 NPS 190
+P+
Sbjct: 488 SPA 490
Score = 42.7 bits (99), Expect = 0.002
Identities = 50/173 (28%), Positives = 63/173 (36%), Gaps = 36/173 (20%)
Query: 18 CPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPR-- 75
CP G R S P P L P P+ P + P+ + + AP LPP
Sbjct: 1405 CPLPTGRRDER-SGPLASPVLLETGLPLPLPLPLPL-PLALPAVLRAQARAPTPLPPLLP 1462
Query: 76 PDFVPFPPPM----------PPSA---QGPLPPCPIRPPFPNHQMRHPFPVP-----PCF 117
PPPM PPS GPL +RPP R +P P F
Sbjct: 1463 APLASCPPPMKRKPGRPRRSPPSMLSLDGPL----VRPPAGAALGRELLLLPGQPQTPVF 1518
Query: 118 PPMPPPMPCP---NNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQ 167
P P N +P PP +PP P PPPPPV P ++ ++
Sbjct: 1519 PSTHDPRTVTLDFRNAGIPAPPPP-------LPPQPPPPPPPPPVEPTKLPFK 1564
Score = 39.7 bits (91), Expect = 0.020
Identities = 56/245 (22%), Positives = 71/245 (28%), Gaps = 75/245 (30%)
Query: 41 LLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRP 100
LL Q+ + + EP S SP + PF P +GP PP RP
Sbjct: 506 LLKEQRTKLLFLREPDSDTELQMEGSPISSSSSQLSPLAPFGTNSQPGFRGPTPPSS-RP 564
Query: 101 PFPNHQMRHPFPVPPC---------FPPMPPPMPCPNNP--------------------- 130
+ P P+P P PPP P P +P
Sbjct: 565 SSTGLEDISPTPLPDSDEDEELDLGLGPRPPPEPGPPDPAGLLSQTAEVALDLVGDRTPT 624
Query: 131 --------------------PVPGAP-------------PGQGTF--PFMMPP------- 148
+P AP PG P ++ P
Sbjct: 625 SEKMDEGQQSSGEDMEISDDEMPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPLPPP 684
Query: 149 PSMPH-PPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANN-SSSPHFRH 206
P P PPPPP P Q + PP PPP + P LP+ P
Sbjct: 685 PGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPPILPP 744
Query: 207 LPPYP 211
LPP+P
Sbjct: 745 LPPFP 749
Score = 37.7 bits (86), Expect = 0.076
Identities = 34/124 (27%), Positives = 42/124 (33%), Gaps = 22/124 (17%)
Query: 25 HGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTT----------FSNSPAPNFLPP 74
H P+ + P P Q PV + PP P+ T F +PAP LPP
Sbjct: 380 HTPPPAQATPAPGFKSAFSPYQTPVAHFPPPPEEPTATAAFGARDSGEFRRAPAPPPLPP 439
Query: 75 RPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPG 134
P PP GP PP + M P F P P P P +
Sbjct: 440 AEPLAKEKPGTPP---GPPPP-------DTNSME--LGGRPTFGWSPEPCDSPGTPTLES 487
Query: 135 APPG 138
+P G
Sbjct: 488 SPAG 491
Score = 35.4 bits (80), Expect = 0.38
Identities = 38/130 (29%), Positives = 44/130 (33%), Gaps = 32/130 (24%)
Query: 28 RPSAPSFRPQNLRLLHPQ-QPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMP 86
RP A + + L LL Q Q PV P + F N+ P PP P P PPP P
Sbjct: 1495 RPPAGAALGRELLLLPGQPQTPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPP 1554
Query: 87 PSAQGPLP--------PCPIRPPFPN----------------------HQMRHPFPVPPC 116
P LP P PP P + RH VPP
Sbjct: 1555 PVEPTKLPFKELDNQWPSEAIPPGPRGRDEVTEEYMELAKSRGPWRRPPKKRHEDLVPPA 1614
Query: 117 -FPPMPPPMP 125
P + PP P
Sbjct: 1615 GSPELSPPQP 1624
Score = 33.1 bits (74), Expect = 1.9
Identities = 43/185 (23%), Positives = 58/185 (31%), Gaps = 58/185 (31%)
Query: 28 RPSAPSFRPQNLRLLHPQQPPVQY-QYEPPSAPST--TFSNSPAPNFLPPRPDFVP---- 80
RP +P P+ HP PP + PP P + + S + +P P P
Sbjct: 1289 RPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQSTETVPATPGGEPPLSG 1348
Query: 81 ------------------FPPPMPPSAQGPLPPCPIR-----PPFPNHQMRHPFPVPPC- 116
+P P P + G LP P R P F + P +P C
Sbjct: 1349 GSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRDFSFTPTF--SEPSGPLLLPVCP 1406
Query: 117 FP---------------------PMPPPMPCPNNPPVPGAPPGQGTFPFMMPP----PSM 151
P P+P P+P P +P Q P +PP P
Sbjct: 1407 LPTGRRDERSGPLASPVLLETGLPLPLPLPLPLPLALPAVLRAQARAPTPLPPLLPAPLA 1466
Query: 152 PHPPP 156
PPP
Sbjct: 1467 SCPPP 1471
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 71.2 bits (173), Expect = 6e-12
Identities = 47/111 (42%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 55 PPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCP------IRPPFPNHQMR 108
PP P P+P+ LP +P PPP+P SA+ P PP P I PP P
Sbjct: 643 PPPPPLPEGVGIPSPSSLPGGTA-IPPPPPLPGSARIPPPPPPLPGSAGIPPPPP----- 696
Query: 109 HPFPVPPCFPPMPPPMPC-PNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPP 158
P P PP PPP+P P PP P P G G P PPP M PPPPP
Sbjct: 697 -PLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPP---PPPGMGMPPPPP 743
Score = 59.7 bits (143), Expect = 2e-08
Identities = 58/180 (32%), Positives = 70/180 (38%), Gaps = 46/180 (25%)
Query: 64 SNSPAPNFLPPR-PDFVPFPP--PMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 120
S S A +PP P P PP P+P + +PP PP P P P PP PP
Sbjct: 555 SLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPP----PPAPGDSTTPPPPPPP--PPP 608
Query: 121 PPPMP---CPNNPP-VPGA------PPGQGTFPFMMPPP-----SMPHP---------PP 156
PPP+P C ++PP +PG PP G PPP +P P PP
Sbjct: 609 PPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPP 668
Query: 157 PPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAP 216
PP +P + PP PPP P P + P PP PLP P
Sbjct: 669 PPPLPGSA--RIPP-------PPPPLPGSAGIPPPPPPLPGEAGMPP----PPPPLPGGP 715
Score = 59.3 bits (142), Expect = 2e-08
Identities = 55/180 (30%), Positives = 63/180 (35%), Gaps = 40/180 (22%)
Query: 29 PSAPSFRPQNLRLLHPQQPPVQYQ----YEPPSAPSTTFSNSPAPNFLPPRPDFVPFP-- 82
PS PS P P PP+ PP AP + + P P PP P P P
Sbjct: 565 PSVPSRAPV------PPAPPLPGDSGTIIPPPPAPGDSTTPPPPP---PPPPPPPPLPGG 615
Query: 83 ----------------PPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMP- 125
PP P S +PP P P P PP PPP+P
Sbjct: 616 VCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPP-PPPLPG 674
Query: 126 CPNNPPVPGAPPGQGTFPFMMPPPSMP----HPPPPPVMPQQVNYQYPPGY-SHHNFPPP 180
PP P PG P PPP +P PPPPP +P PP + PPP
Sbjct: 675 SARIPPPPPPLPGSAGIP--PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP 732
Score = 58.9 bits (141), Expect = 3e-08
Identities = 42/136 (30%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Query: 19 PRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDF 78
P G P P P+ + + P P PP + P P LP
Sbjct: 633 PPPLSGDATIPPPPPL-PEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGI 691
Query: 79 VPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPG 138
P PPP+P A P PP P+ P P PFP P PP PP M P PP P
Sbjct: 692 PPPPPPLPGEAGMPPPPPPL-PGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPA 750
Query: 139 QGTFPFMMPPPSMPHP 154
PF + P + P
Sbjct: 751 APVLPFGLTPKKLYKP 766
Score = 56.2 bits (134), Expect = 2e-07
Identities = 54/185 (29%), Positives = 61/185 (32%), Gaps = 44/185 (23%)
Query: 55 PPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPV- 113
PPS PS +P P P D PP P PP P PP P + +
Sbjct: 564 PPSVPS----RAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCIS 619
Query: 114 -PPCFP-----------------PMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPH-- 153
PP P P PPP+P P P + PG P PPP +P
Sbjct: 620 SPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIP---PPPPLPGSA 676
Query: 154 --PPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211
PPPPP +P PP PPP P P P PP P
Sbjct: 677 RIPPPPPPLPGSAG--IPP-------PPPPLPGEAGMPPPPPPLPGGPGIP-----PPPP 722
Query: 212 LPKAP 216
P P
Sbjct: 723 FPGGP 727
Score = 46.2 bits (108), Expect = 2e-04
Identities = 44/125 (35%), Positives = 51/125 (40%), Gaps = 23/125 (18%)
Query: 113 VPPCFP---PMPPPMPCPNN-----PPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQV 164
VPP P P+PP P P + PP P PG T P PPP P PPPP +P V
Sbjct: 563 VPPSVPSRAPVPPAPPLPGDSGTIIPPPPA--PGDSTTP--PPPPPPP--PPPPPLPGGV 616
Query: 165 NYQYP---PGYSHHNFPPPSFNSFQNNPSSFLPSA----NNSSSPHFRHLPPYPLPKAPS 217
P PG + + PPP P LP + SS P +P P P P
Sbjct: 617 CISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIP--PPPPLPG 674
Query: 218 ERRSP 222
R P
Sbjct: 675 SARIP 679
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,391,490
Number of Sequences: 37866
Number of extensions: 4286909
Number of successful extensions: 63124
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 1520
Number of HSP's that attempted gapping in prelim test: 24208
Number of HSP's gapped (non-prelim): 16778
length of query: 1374
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1259
effective length of database: 13,892,928
effective search space: 17491196352
effective search space used: 17491196352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.