TMEM55B 5704

Name: TMEM55B	Sequence: fasta or formatted (284aa)		NCBI GI: 154816186
Description: transmembrane protein 55B isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {277aa} transmembrane protein 55B isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 24 2 C cysteine 6.7 19 2 D aspartate 1.8 5 1 E glutamate 2.8 8 1 F phenylalanine 2.8 8 1 G glycine 11.6 33 3 H histidine 3.2 9 1 I isoleucine 4.6 13 2 K lysine 4.6 13 2 L leucine 8.5 24 3 M methionine 1.8 5 1 N asparagine 2.8 8 1 P proline 12.3 35 3 Q glutamine 2.1 6 1 R arginine 6.0 17 2 S serine 5.3 15 2 T threonine 4.2 12 1 V valine 6.3 18 2 W tryptophan 1.4 4 1 Y tyrosine 2.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 55B isoform 1 TMEM55B 0.961 transmembrane protein 55B isoform 2 TMEM55A 0.450 transmembrane protein 55A SMARCA4 0.034 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.034 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.034 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.034 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.034 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.034 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.034 SWI/SNF-related matrix-associated actin-dependent re... MEX3D 0.034 ring finger and KH domain containing 1 BSN 0.029 bassoon protein LGALS3 0.029 galectin 3 SFPQ 0.029 splicing factor proline/glutamine rich (polypyrimidin... FAM155B 0.027 transmembrane protein 28 POU4F1 0.027 POU domain, class 4, transcription factor 1 NACA 0.027 nascent polypeptide-associated complex alpha subuni... SPAG8 0.025 sperm associated antigen 8 isoform 1 WBP11 0.025 WW domain binding protein 11 SPAG8 0.025 sperm associated antigen 8 isoform 2 ZNF281 0.025 zinc finger protein 281 CPSF6 0.024 cleavage and polyadenylation specific factor 6, 68 ... KHSRP 0.024 KH-type splicing regulatory protein WIPF3 0.024 WAS/WASL interacting protein family, member 3 [Homo... KCNH4 0.024 potassium voltage-gated channel, subfamily H, member ... SMR3A 0.024 submaxillary gland androgen regulated protein 3 homo... COL1A1 0.022 alpha 1 type I collagen preproprotein PAIP1 0.022 poly(A) binding protein interacting protein 1 isofor... OBFC2B 0.022 oligonucleotide/oligosaccharide-binding fold contain... AR 0.022 androgen receptor isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.