Guide to the Human Genome
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Name: MIPEP Sequence: fasta or formatted (713aa) NCBI GI: 156105687
Description:

mitochondrial intermediate peptidase

Referenced in:

Mitochondria
Peptide-processing Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         53           3
 C cysteine            2.0         14           1
 D aspartate           5.6         40           2
 E glutamate           7.0         50           2
 F phenylalanine       4.8         34           2
 G glycine             6.6         47           3
 H histidine           2.8         20           1
 I isoleucine          3.5         25           3
 K lysine              4.9         35           2
 L leucine            12.1         86           2
 M methionine          3.6         26           2
 N asparagine          3.1         22           1
 P proline             5.5         39           2
 Q glutamine           3.4         24           1
 R arginine            7.2         51           2
 S serine              6.6         47           2
 T threonine           3.9         28           2
 V valine              5.9         42           3
 W tryptophan          0.7          5           1
 Y tyrosine            3.5         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial intermediate peptidase 
THOP1                 0.122   thimet oligopeptidase 1 
NLN                   0.112   neurolysin 
SERPINA9              0.007   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINA9              0.005   serine (or cysteine) proteinase inhibitor, clade A ...
ADAR                  0.004   adenosine deaminase, RNA-specific isoform c 
LOC729575             0.004   PREDICTED: hypothetical protein 
LOC100288110          0.004   PREDICTED: hypothetical protein 
LOC100288110          0.004   PREDICTED: hypothetical protein XP_002343007 
ABCF1                 0.004   ATP-binding cassette, sub-family F, member 1 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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