Search of human proteins with 15431288

Search of human proteins with 15431288

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15431288 ribosomal protein L10a [Homo sapiens]
         (217 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15431288 ribosomal protein L10a [Homo sapiens]                     430   e-121
gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens]           52   5e-07
gi|155969714 nuclear protein,  ataxia-telangiectasia locus [Homo...    31   0.92 
gi|46049092 nebulin-related anchoring protein isoform C [Homo sa...    31   0.92 
gi|164519084 RAB GTPase activating protein 1 [Homo sapiens]            30   1.6  
gi|22027646 angiomotin like 1 [Homo sapiens]                           30   1.6  
gi|4506221 proteasome 26S non-ATPase subunit 12 isoform 1 [Homo ...    29   3.5  
gi|28872765 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo...    29   3.5  
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    28   4.6  
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        28   6.0  
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       28   6.0  
gi|72534720 IQ motif containing H isoform 1 [Homo sapiens]             28   6.0  
gi|12232475 IQ motif containing H isoform 2 [Homo sapiens]             28   6.0  
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ...    28   6.0  
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ...    28   6.0  
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ...    28   6.0  

>gi|15431288 ribosomal protein L10a [Homo sapiens]
          Length = 217

 Score =  430 bits (1105), Expect = e-121
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
           MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR
Sbjct: 1   MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60

Query: 61  PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
           PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI
Sbjct: 61  PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120

Query: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
           PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180

Query: 181 YNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
           YNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY
Sbjct: 181 YNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens]
          Length = 490

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 30/126 (23%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 85  MDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFP-SLLTHNEN 143
           + ++ LKK  K+ +   +L   +D FL    + + +P ++G    +  K P S+   ++N
Sbjct: 130 ISLQTLKKEYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKN 189

Query: 144 MVAKVDE-VKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVR 202
           +  ++++ +  T+    K   C A+ +GHV M  + ++ NI      L   L + W++V+
Sbjct: 190 LSREINDCIGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVK 249

Query: 203 ALYIKS 208
            L++K+
Sbjct: 250 LLFVKT 255


>gi|155969714 nuclear protein,  ataxia-telangiectasia locus [Homo
           sapiens]
          Length = 1427

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 89  ALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
           A +K+  NK L +KLA+  + FL S++ I Q+P+
Sbjct: 249 AREKILSNKSLQEKLAENINKFLTSDNNIAQVPK 282


>gi|46049092 nebulin-related anchoring protein isoform C [Homo
           sapiens]
          Length = 1695

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 132 GKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLV 191
           G FP+++T       K  E+ S IK++         A  H     D LV     +VN LV
Sbjct: 309 GSFPAMITPAYQNAKKAHELASDIKYRQDFNKMKGAAHYHSLPAQDNLVLKQAQSVNKLV 368

Query: 192 S--LLKKNWQN 200
           S    K+N+QN
Sbjct: 369 SENKYKENYQN 379


>gi|164519084 RAB GTPase activating protein 1 [Homo sapiens]
          Length = 1069

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 129  NKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE-----LVYNI 183
            NK G+   + +  E +    DE K T+K Q+++ + L +A   +++ + E     L +++
Sbjct: 977  NKEGRVKGISSTKEVLDEDTDEEKETLKNQLRE-MELELAQTKLQLVEAECKIQDLEHHL 1035

Query: 184  HLAVNFLVSLLKKNWQNVRALYIKSTMG 211
             LA+N  V   KK W N     IK+  G
Sbjct: 1036 GLALN-EVQAAKKTWFNRTLSSIKTATG 1062


>gi|22027646 angiomotin like 1 [Homo sapiens]
          Length = 956

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 1   MSSKVSRDTLYEAVREVLHGNQRKRRKF-------LETVELQISLKNYDPQKDKRFSG 51
           + S   R++L +A+R  L G  R+   F       LET   Q+S + Y+  +DK   G
Sbjct: 487 VKSTTKRESLDKAMRNKLEGEIRRLHDFNRDLRDRLETANRQLSSREYEGHEDKAAEG 544


>gi|4506221 proteasome 26S non-ATPase subunit 12 isoform 1 [Homo
           sapiens]
          Length = 456

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 22/173 (12%)

Query: 11  YEAVREV--LHGNQRKRRKFLETVELQISLKNYDPQKDK---RFSGTVRLKSTPRPK--- 62
           Y A+ +   +     K ++ L++V L + L  +D ++     R SG  +L+  P+ K   
Sbjct: 247 YRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLL 306

Query: 63  ----------FSVCV----LGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYD 108
                     +S  V    +  ++   E+ A D+     E  K+    K  V +   +  
Sbjct: 307 KLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGSTEEGEKRWKDLKNRVVEHNIRIM 366

Query: 109 AFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKK 161
           A   +   +K++ ++L   ++++  F S L  N+ + AKVD +   I FQ  K
Sbjct: 367 AKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPK 419


>gi|28872765 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo
           sapiens]
          Length = 436

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 22/173 (12%)

Query: 11  YEAVREV--LHGNQRKRRKFLETVELQISLKNYDPQKDK---RFSGTVRLKSTPRPK--- 62
           Y A+ +   +     K ++ L++V L + L  +D ++     R SG  +L+  P+ K   
Sbjct: 227 YRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLL 286

Query: 63  ----------FSVCV----LGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYD 108
                     +S  V    +  ++   E+ A D+     E  K+    K  V +   +  
Sbjct: 287 KLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGSTEEGEKRWKDLKNRVVEHNIRIM 346

Query: 109 AFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKK 161
           A   +   +K++ ++L   ++++  F S L  N+ + AKVD +   I FQ  K
Sbjct: 347 AKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPK 399


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/77 (20%), Positives = 35/77 (45%)

Query: 88  EALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAK 147
           E  K+ N++  L+++L       +     IK++  I+    +   +F +L +H EN    
Sbjct: 697 ELKKRENESDSLIQELETSNKKIITQNQRIKELINIIDQKEDTINEFQNLKSHMENTFKC 756

Query: 148 VDEVKSTIKFQMKKVLC 164
            D+  ++      K++C
Sbjct: 757 NDKADTSSLIINNKLIC 773


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 1   MSSKVSRDTLYEAVREVLHGNQRKRRKF-------LETVELQISLKNYDPQKDKR 48
           + S   R+ L +A+R  L G  R+   F       LET   Q++ K Y+  +D R
Sbjct: 71  VKSSSKREALEKAMRNKLEGEIRRMHDFNRDLRERLETANKQLAEKEYEGSEDTR 125


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 1   MSSKVSRDTLYEAVREVLHGNQRKRRKF-------LETVELQISLKNYDPQKDKR 48
           + S   R+ L +A+R  L G  R+   F       LET   Q++ K Y+  +D R
Sbjct: 480 VKSSSKREALEKAMRNKLEGEIRRMHDFNRDLRERLETANKQLAEKEYEGSEDTR 534


>gi|72534720 IQ motif containing H isoform 1 [Homo sapiens]
          Length = 1027

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 18/50 (36%), Positives = 23/50 (46%)

Query: 26  RKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCD 75
           RKFL+T   Q  +    P  D   + TV +   P  K SV   GDQ H +
Sbjct: 730 RKFLQTFLSQGGVIEAFPPADNVTNLTVDMLIEPNGKISVLSTGDQLHAE 779


>gi|12232475 IQ motif containing H isoform 2 [Homo sapiens]
          Length = 621

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 18/50 (36%), Positives = 23/50 (46%)

Query: 26  RKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCD 75
           RKFL+T   Q  +    P  D   + TV +   P  K SV   GDQ H +
Sbjct: 391 RKFLQTFLSQGGVIEAFPPADNVTNLTVDMLIEPNGKISVLSTGDQLHAE 440


>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
           sapiens]
          Length = 1135

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 23  RKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
           +K+ K    VE++  LK+  P  +K   G V+ K++P P+
Sbjct: 628 KKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPE 667


>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
           sapiens]
          Length = 1188

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 23  RKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
           +K+ K    VE++  LK+  P  +K   G V+ K++P P+
Sbjct: 653 KKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPE 692


>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
           sapiens]
          Length = 1160

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 23  RKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
           +K+ K    VE++  LK+  P  +K   G V+ K++P P+
Sbjct: 653 KKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPE 692


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,329,928
Number of Sequences: 37866
Number of extensions: 278330
Number of successful extensions: 712
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 702
Number of HSP's gapped (non-prelim): 17
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.