Guide to the Human Genome
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Name: RPL10A Sequence: fasta or formatted (217aa) NCBI GI: 15431288
Description:

ribosomal protein L10a

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         13           1
 C cysteine            1.4          3           1
 D aspartate           5.1         11           2
 E glutamate           4.6         10           1
 F phenylalanine       3.2          7           1
 G glycine             3.7          8           1
 H histidine           2.8          6           1
 I isoleucine          4.1          9           1
 K lysine             14.3         31           2
 L leucine            12.0         26           2
 M methionine          2.8          6           1
 N asparagine          5.1         11           1
 P proline             3.7          8           1
 Q glutamine           4.1          9           2
 R arginine            5.1         11           2
 S serine              6.0         13           2
 T threonine           3.7          8           1
 V valine              9.2         20           1
 W tryptophan          0.5          1           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L10a 
RSL1D1                0.067   ribosomal L1 domain containing 1 
NPAT                  0.015   nuclear protein,  ataxia-telangiectasia locus [Homo...
NRAP                  0.015   nebulin-related anchoring protein isoform C 
RABGAP1               0.012   RAB GTPase activating protein 1 
AMOTL1                0.012   angiomotin like 1 
PSMD12                0.010   proteasome 26S non-ATPase subunit 12 isoform 1 
PSMD12                0.010   proteasome 26S non-ATPase subunit 12 isoform 2 [Homo...
KIF20B                0.007   M-phase phosphoprotein 1 
AMOT                  0.007   angiomotin isoform 2 
AMOT                  0.007   angiomotin isoform 1 
IQCH                  0.007   IQ motif containing H isoform 1 
IQCH                  0.007   IQ motif containing H isoform 2 
ZMYND8                0.007   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.007   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.007   zinc finger, MYND-type containing 8 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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