Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 154146216

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154146216 pleckstrin homology domain containing, family A
(phosphoinositide binding specific) member 2 [Homo sapiens]
         (425 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154146216 pleckstrin homology domain containing, family A (ph...   873   0.0  
gi|50234893 pleckstrin homology domain containing, family A (pho...   328   6e-90
gi|31377720 pleckstrin homology domain containing, family A (pho...   328   6e-90
gi|55741447 pleckstrin homology domain containing, family H (wit...    61   2e-09
gi|217416392 pleckstrin homology domain containing, family H (wi...    59   1e-08
gi|83716021 GRB2-associated binding protein family, member 4 [Ho...    57   4e-08
gi|18105042 GRB2-associated binding protein 2 isoform a [Homo sa...    56   5e-08
gi|158631203 dual adaptor of phosphotyrosine and 3-phosphoinosit...    55   2e-07
gi|156616273 pleckstrin [Homo sapiens]                                 54   2e-07
gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo ...    53   5e-07
gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sa...    51   2e-06
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa...    50   4e-06
gi|110349763 cytohesin 1 isoform 2 [Homo sapiens]                      50   4e-06
gi|218563749 ArfGAP with coiled-coil, ankyrin repeat and PH doma...    49   7e-06
gi|187608516 centaurin, beta 2 [Homo sapiens]                          49   7e-06
gi|6912460 GRB2-associated binding protein 2 isoform b [Homo sap...    49   9e-06
gi|7706643 pleckstrin 2 [Homo sapiens]                                 49   9e-06
gi|4758964 cytohesin 1 isoform 1 [Homo sapiens]                        49   1e-05
gi|93102364 SWAP-70 protein [Homo sapiens]                             48   1e-05
gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo sa...    47   3e-05
gi|239047795 pleckstrin homology domain containing, family A mem...    47   3e-05
gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa...    47   3e-05
gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sa...    47   3e-05
gi|154354979 myosin X [Homo sapiens]                                   47   4e-05
gi|219689123 pleckstrin homology domain containing, family A mem...    46   6e-05
gi|19923493 pleckstrin homology domain containing, family A memb...    46   6e-05
gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo ...    46   6e-05
gi|38201692 RAS p21 protein activator 3 [Homo sapiens]                 45   1e-04
gi|24432056 hypothetical protein LOC144717 [Homo sapiens]              45   1e-04
gi|4758968 cytohesin 3 [Homo sapiens]                                  45   1e-04

>gi|154146216 pleckstrin homology domain containing, family A
           (phosphoinositide binding specific) member 2 [Homo
           sapiens]
          Length = 425

 Score =  873 bits (2255), Expect = 0.0
 Identities = 425/425 (100%), Positives = 425/425 (100%)

Query: 1   MPYVDRQNRICGFLDIEEHENSGKFLRRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQ 60
           MPYVDRQNRICGFLDIEEHENSGKFLRRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQ
Sbjct: 1   MPYVDRQNRICGFLDIEEHENSGKFLRRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQ 60

Query: 61  LTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDMKDWVEALNQASKITVPKGG 120
           LTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDMKDWVEALNQASKITVPKGG
Sbjct: 61  LTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDMKDWVEALNQASKITVPKGG 120

Query: 121 GLPMTTEVLKSLAAPPALEKKPQVAYKTEIIGGVVVHTPISQNGGDGQEGSEPGSHTILR 180
           GLPMTTEVLKSLAAPPALEKKPQVAYKTEIIGGVVVHTPISQNGGDGQEGSEPGSHTILR
Sbjct: 121 GLPMTTEVLKSLAAPPALEKKPQVAYKTEIIGGVVVHTPISQNGGDGQEGSEPGSHTILR 180

Query: 181 RSQSYIPTSGCRASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLR 240
           RSQSYIPTSGCRASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLR
Sbjct: 181 RSQSYIPTSGCRASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLR 240

Query: 241 TIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQAL 300
           TIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQAL
Sbjct: 241 TIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQAL 300

Query: 301 KCHPRETSFSRSISLTRPGSSSLSSGPNSILCRGRPPLEEKKALCKAPSVASSWQPWTPV 360
           KCHPRETSFSRSISLTRPGSSSLSSGPNSILCRGRPPLEEKKALCKAPSVASSWQPWTPV
Sbjct: 301 KCHPRETSFSRSISLTRPGSSSLSSGPNSILCRGRPPLEEKKALCKAPSVASSWQPWTPV 360

Query: 361 PQAGEKLLPPGDTSEDSLFTPRPGEGSAPGVLPSSRIRHRSEPQHPKEKPFMFNLDDENI 420
           PQAGEKLLPPGDTSEDSLFTPRPGEGSAPGVLPSSRIRHRSEPQHPKEKPFMFNLDDENI
Sbjct: 361 PQAGEKLLPPGDTSEDSLFTPRPGEGSAPGVLPSSRIRHRSEPQHPKEKPFMFNLDDENI 420

Query: 421 RTSDV 425
           RTSDV
Sbjct: 421 RTSDV 425


>gi|50234893 pleckstrin homology domain containing, family A
           (phosphoinositide binding specific) member 1 [Homo
           sapiens]
          Length = 404

 Score =  328 bits (841), Expect = 6e-90
 Identities = 174/308 (56%), Positives = 220/308 (71%), Gaps = 9/308 (2%)

Query: 1   MPYVDRQNRICGFLDIEEHENSGKFLRRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQ 60
           MPYVDRQNRICGFLDIEE+ENSGKFLRRYFILDT+ +  +WYMDNPQNL  G+  VGA++
Sbjct: 1   MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK 60

Query: 61  LTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDMKDWVEALNQASKITVPKGG 120
           LTYISKVS AT K +PK  FCFV+NA  ++YFLQANDQ+D+ +WV  LN+A KITVPK  
Sbjct: 61  LTYISKVSDAT-KLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQS 119

Query: 121 GLPMTTEVLKSLAAPPALEKKPQVAYKTEIIGGVVVHTPISQNGGDGQEGSEPGSHTILR 180
                ++   +L+      KK QV+Y+T+I+GGV + TP  +   +  E  E      L+
Sbjct: 120 DSQPNSD---NLSRHGECGKK-QVSYRTDIVGGVPIITPTQKE--EVNECGESIDRNNLK 173

Query: 181 RSQSYIPTSGCRASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLR 240
           RSQS++P    +      +IK+GYCVKQG V K+WKRR+F LD+ TI YFK E ++EPLR
Sbjct: 174 RSQSHLPYFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLR 233

Query: 241 TIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQAL 300
            I LK+V K  EC  K  D++MRDNLFEI+T+SRTFYVQADSPE+MHSWIK +  A+ A 
Sbjct: 234 VIPLKEVHKVQEC--KQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 291

Query: 301 KCHPRETS 308
           +   R  S
Sbjct: 292 RGPGRSAS 299


>gi|31377720 pleckstrin homology domain containing, family A
           (phosphoinositide binding specific) member 1 [Homo
           sapiens]
          Length = 404

 Score =  328 bits (841), Expect = 6e-90
 Identities = 174/308 (56%), Positives = 220/308 (71%), Gaps = 9/308 (2%)

Query: 1   MPYVDRQNRICGFLDIEEHENSGKFLRRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQ 60
           MPYVDRQNRICGFLDIEE+ENSGKFLRRYFILDT+ +  +WYMDNPQNL  G+  VGA++
Sbjct: 1   MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK 60

Query: 61  LTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDMKDWVEALNQASKITVPKGG 120
           LTYISKVS AT K +PK  FCFV+NA  ++YFLQANDQ+D+ +WV  LN+A KITVPK  
Sbjct: 61  LTYISKVSDAT-KLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQS 119

Query: 121 GLPMTTEVLKSLAAPPALEKKPQVAYKTEIIGGVVVHTPISQNGGDGQEGSEPGSHTILR 180
                ++   +L+      KK QV+Y+T+I+GGV + TP  +   +  E  E      L+
Sbjct: 120 DSQPNSD---NLSRHGECGKK-QVSYRTDIVGGVPIITPTQKE--EVNECGESIDRNNLK 173

Query: 181 RSQSYIPTSGCRASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLR 240
           RSQS++P    +      +IK+GYCVKQG V K+WKRR+F LD+ TI YFK E ++EPLR
Sbjct: 174 RSQSHLPYFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLR 233

Query: 241 TIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQAL 300
            I LK+V K  EC  K  D++MRDNLFEI+T+SRTFYVQADSPE+MHSWIK +  A+ A 
Sbjct: 234 VIPLKEVHKVQEC--KQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 291

Query: 301 KCHPRETS 308
           +   R  S
Sbjct: 292 RGPGRSAS 299


>gi|55741447 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 1 [Homo sapiens]
          Length = 1364

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)

Query: 179 LRRSQSYIPTSGCRASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQD--R 236
           L+R+ SY  T G     G  L KSGY +K G+  K+WKRR+F L    I Y+K   D  R
Sbjct: 561 LQRTSSY-STDGLGLG-GESLEKSGYLLKMGSQVKTWKRRWFVLRQGQIMYYKSPSDVIR 618

Query: 237 EPLRTIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAA 296
           +P   + L        C +  G+       F++I+  +T+Y+ ADSP  +  WI+ + + 
Sbjct: 619 KPQGQVDLNS-----RCQIVRGE---GSQTFQLISEKKTYYLTADSPSLLEEWIRVLQSL 670

Query: 297 VQALKCHP 304
           ++     P
Sbjct: 671 LKVQATGP 678


>gi|217416392 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 2 [Homo sapiens]
          Length = 1493

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 10/109 (9%)

Query: 198 PLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQD--REPLRTIFLKDVLKTHECLV 255
           PL KSGY +K     KSWKRR+F L    + Y+K   D  R+P   I L     +  C +
Sbjct: 703 PLEKSGYLLKMSGKVKSWKRRWFVLKGGELLYYKSPSDVIRKPQGHIEL-----SASCSI 757

Query: 256 KSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQALKCHP 304
             GD        ++ T   T+Y+ ADSP  +  WIK +   ++    +P
Sbjct: 758 LRGD---NKQTVQLTTEKHTYYLTADSPNILEEWIKVLQNVLRVQAANP 803


>gi|83716021 GRB2-associated binding protein family, member 4 [Homo
           sapiens]
          Length = 574

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 31/190 (16%)

Query: 201 KSGYCVKQGNVRKS----------WKRRFFAL-------DDFTICYFKCEQDREPLRTIF 243
           +SG+ +  G +RKS          W++R+F L       D   + Y+K +  ++PLRTI 
Sbjct: 36  RSGHVLYSGWLRKSPPEKKLRLFAWRKRWFILRRGQTSSDPDVLEYYKNDGSKKPLRTIN 95

Query: 244 LK--DVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQALK 301
           L   + L     L  +   + +  +F+I TS RTFY+ A++ EDM+ W++ I        
Sbjct: 96  LNLCEQLDVDVTLNFNKKEIQKGYMFDIKTSERTFYLVAETREDMNEWVQSI-----CQI 150

Query: 302 CHPRETSFSRSISLTRPGSSSLSSGPNSILCRGRPPLEEKKALCKAPSVASSWQPWTPVP 361
           C  R+   +  +      S  L S P    C     L +++     P V+    P  P+P
Sbjct: 151 CGFRQEESTGFLGNISSASHGLCSSPAEPSC-SHQHLPQEQEPTSEPPVSHCVPPTWPIP 209

Query: 362 QAGEKLLPPG 371
                  PPG
Sbjct: 210 ------APPG 213


>gi|18105042 GRB2-associated binding protein 2 isoform a [Homo
           sapiens]
          Length = 676

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 13/170 (7%)

Query: 212 RKSWKRRFFAL-------DDFTICYFKCEQDREPLRTIFLKDVLKTHECLVKSGDLLMRD 264
           R +WK+R+F L       D   + Y+K +  ++PLR I L    +    L  +   L   
Sbjct: 24  RYAWKKRWFILRSGRMSGDPDVLEYYKNDHSKKPLRIINLNFCEQVDAGLTFNKKELQDS 83

Query: 265 NLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQALKCHPRETSFSRSISLTRPGSSSLS 324
            +F+I TS RTFY+ A++ EDM+ W++ I   +         T   R++S    G     
Sbjct: 84  FVFDIKTSERTFYLVAETEEDMNKWVQSI-CQICGFNQAEESTDSLRNVSSAGHGP---R 139

Query: 325 SGPNSILCRGRPPLEEKKALCKAPSVASSWQPWTPVPQAGEKLLPPGDTS 374
           S P  +    +  L E+K+   APS +S    +T  P     + P   TS
Sbjct: 140 SSPAELSSSSQHLLRERKS--SAPSHSSQPTLFTFEPPVSNHMQPTLSTS 187


>gi|158631203 dual adaptor of phosphotyrosine and
           3-phosphoinositides [Homo sapiens]
          Length = 280

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 195 TGPPL-IKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHEC 253
           T P L  K GY  KQG + K+WK R+F L    + YFK +   EP+R      +L   EC
Sbjct: 160 TAPSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIR------ILDLTEC 213

Query: 254 LVKSGDLLM-RDNLFEIITSSRTFYVQADSPEDMHSWIK 291
                D    R N F ++   RTFY+ A +  +   WIK
Sbjct: 214 SAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIK 252


>gi|156616273 pleckstrin [Homo sapiens]
          Length = 350

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 199 LIKSGYCVKQGNVRKSWKRRFFAL--DDFTICYFKCEQDREPLRTIFLKDVLKTHECLVK 256
           +IK G  +KQG+ RK+WK R F L  D   + Y+      +PL  I L+  + T      
Sbjct: 245 IIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNS 304

Query: 257 SGDLLMRDNLFEIITSSRT-FYVQADSPEDMHSWIKEIGAA 296
           +G     +NLFEIIT+    +++QA +P++   WI+ I  A
Sbjct: 305 NGRKSEEENLFEIITADEVHYFLQAATPKERTEWIRAIQMA 345



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 197 PPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVK 256
           P  I+ GY VK+G+V  +WK  +  L +  I ++K + D  P   I LK    T  C   
Sbjct: 3   PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPC--- 59

Query: 257 SGDLLMRDNLFEIITS-SRTFYVQADSPEDMHSWIKEIGAAVQALK 301
             D   R  +F+I T+  +  + QA   E+  +W+++I  A++ ++
Sbjct: 60  -QDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDIKKAIKCIE 104



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 28  RYFILDTQANCLLWYMDNPQNLAMGAGAVGALQLTYISKVSIATPKQKPKTPFCFVINAL 87
           R FIL      L +Y  +P       GA+        S  S +  ++  +     +I A 
Sbjct: 264 RKFILREDPAYLHYY--DPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD 321

Query: 88  SQRYFLQANDQKDMKDWVEALNQASK 113
              YFLQA   K+  +W+ A+  AS+
Sbjct: 322 EVHYFLQAATPKERTEWIRAIQMASR 347


>gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo
           sapiens]
          Length = 1048

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 8/130 (6%)

Query: 198 PLIKSGYCVKQGNVR-KSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVK 256
           P+ K+G+  KQ +   K W +R+F L D  + Y+K E++   L +I L   L      V+
Sbjct: 59  PVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPL---LSFRVAAVQ 115

Query: 257 SGDLLMRDNLFEIITSS-RTFYVQADSPEDMHSWIKEIGAAVQALKCHPRETSFSRSI-- 313
             D + R + F+   +  RT++  A+SPE+  +WI+ +G A + ++  P + S  +++  
Sbjct: 116 PSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR-VQIPPAQKSVPQAVRH 174

Query: 314 SLTRPGSSSL 323
           S  +P S ++
Sbjct: 175 SHEKPDSENV 184



 Score = 34.3 bits (77), Expect = 0.22
 Identities = 18/91 (19%), Positives = 44/91 (48%), Gaps = 7/91 (7%)

Query: 27  RRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQLTYISKVSIATPKQKPKTPFCFVINA 86
           +R+F+L  +  CL +Y D  +   +G+  + + ++  +      + K   K     V   
Sbjct: 79  KRWFVLVDR--CLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGV--- 133

Query: 87  LSQRYFLQANDQKDMKDWVEALNQASKITVP 117
             + YF  A   ++ + W++A+ +A+++ +P
Sbjct: 134 --RTYFFSAESPEEQEAWIQAMGEAARVQIP 162


>gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo
           sapiens]
          Length = 748

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 18/106 (16%)

Query: 200 IKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLK-DVLKTHEC----- 253
           IK G+  KQG   K+W  R+F L    + YFK E + +PL TIFL  + +  H C     
Sbjct: 21  IKCGWLRKQGGFVKTWHTRWFVLKGDQLYYFKDEDETKPLGTIFLPGNKVSEHPCNEENP 80

Query: 254 ------LVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEI 293
                 +V  GD   RD +     +  ++ + A +  DM  W+K I
Sbjct: 81  GKFLFEVVPGGD---RDRM---TANHESYLLMASTQNDMEDWVKSI 120



 Score = 32.7 bits (73), Expect = 0.64
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 29/131 (22%)

Query: 6   RQNRI-CGFLDIEEHENSGKFLR----RYFILDTQANCLLWYMDNPQNLAMGAGAVGALQ 60
           RQN I CG+L        G F++    R+F+L  + + L ++ D  +   +G   +    
Sbjct: 17  RQNAIKCGWL-----RKQGGFVKTWHTRWFVL--KGDQLYYFKDEDETKPLGTIFLPG-- 67

Query: 61  LTYISKVSIATPKQKPKTPFCFVI---------NALSQRYFLQANDQKDMKDWVEALNQA 111
               +KVS     ++    F F +          A  + Y L A+ Q DM+DWV+++ + 
Sbjct: 68  ----NKVSEHPCNEENPGKFLFEVVPGGDRDRMTANHESYLLMASTQNDMEDWVKSIRRV 123

Query: 112 SKITVPKGGGL 122
             I  P GGG+
Sbjct: 124 --IWGPFGGGI 132


>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
           sapiens]
          Length = 631

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 199 LIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVKSG 258
           ++K GY  K+G++R++W  R+F L    +CYF  E+ +E    I     L  H C+    
Sbjct: 217 VLKQGYLWKRGHLRRNWAERWFQLQPSCLCYFGSEECKEKRGII----PLDAHCCVEVLP 272

Query: 259 DLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQ 298
           D   +  +F + T++RT+ + A        W   I  A++
Sbjct: 273 DRDGKRCMFCVKTANRTYEMSASDTRQRQEWTAAIQMAIR 312


>gi|110349763 cytohesin 1 isoform 2 [Homo sapiens]
          Length = 397

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 24/137 (17%)

Query: 201 KSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDRE-----PLRTIFLKDV--LKTHEC 253
           + G+ +K G   K+WKRR+F L D  + YF+   D+E     PL  + +++V   K   C
Sbjct: 263 REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNC 322

Query: 254 LVKSGDLLMRDNLFEIITSSRT-------------FYVQADSPEDMHSWIKEIGAAVQAL 300
                +L + DN  ++I + +T             + + A +PE+   WIK I AA+   
Sbjct: 323 F----ELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIKAAISRD 378

Query: 301 KCHPRETSFSRSISLTR 317
             +    +  + +S T+
Sbjct: 379 PFYEMLAARKKKVSSTK 395


>gi|218563749 ArfGAP with coiled-coil, ankyrin repeat and PH domains
           3 [Homo sapiens]
          Length = 834

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 32/133 (24%), Positives = 70/133 (52%), Gaps = 8/133 (6%)

Query: 199 LIKSGYCVKQG-NVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVKS 257
           ++  GY  K+  N  K+W RR+F++ +  + Y K  +D     T+ + D+     C VK 
Sbjct: 269 VVMEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKKLKDA---LTVVVDDL---RLCSVKP 322

Query: 258 GDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQALKCHPRETSFSRSISLT- 316
            + + R   FE+++ +++  +QADS +   +W++ + A++ +      ++ +S  +  T 
Sbjct: 323 CEDIERRFCFEVLSPTKSCMLQADSEKLRQAWVQAVQASIASAYRESPDSCYSERLDRTA 382

Query: 317 RPGSSSLSSGPNS 329
            P +SS+ S  ++
Sbjct: 383 SPSTSSIDSATDT 395


>gi|187608516 centaurin, beta 2 [Homo sapiens]
          Length = 778

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 8/132 (6%)

Query: 199 LIKSGYCVKQG-NVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVKS 257
           ++  GY  K+  N  K+W RR+F++ +  + Y K  +D     T+ ++D+     C VK 
Sbjct: 267 IVMEGYLFKRASNAFKTWNRRWFSIQNNQLVYQKKFKDNP---TVVVEDL---RLCTVKH 320

Query: 258 GDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQALKCHPRETSFSRSISLTR 317
            + + R   FE+++ +++  +QADS +   +WIK +  ++ A     +     +    + 
Sbjct: 321 CEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSI-ATAYREKGDESEKLDKKSS 379

Query: 318 PGSSSLSSGPNS 329
           P + SL SG  S
Sbjct: 380 PSTGSLDSGNES 391


>gi|6912460 GRB2-associated binding protein 2 isoform b [Homo
           sapiens]
          Length = 638

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 6/146 (4%)

Query: 229 YFKCEQDREPLRTIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHS 288
           Y+K +  ++PLR I L    +    L  +   L    +F+I TS RTFY+ A++ EDM+ 
Sbjct: 10  YYKNDHSKKPLRIINLNFCEQVDAGLTFNKKELQDSFVFDIKTSERTFYLVAETEEDMNK 69

Query: 289 WIKEIGAAVQALKCHPRETSFSRSISLTRPGSSSLSSGPNSILCRGRPPLEEKKALCKAP 348
           W++ I   +         T   R++S    G     S P  +    +  L E+K+   AP
Sbjct: 70  WVQSI-CQICGFNQAEESTDSLRNVSSAGHGP---RSSPAELSSSSQHLLRERKS--SAP 123

Query: 349 SVASSWQPWTPVPQAGEKLLPPGDTS 374
           S +S    +T  P     + P   TS
Sbjct: 124 SHSSQPTLFTFEPPVSNHMQPTLSTS 149


>gi|7706643 pleckstrin 2 [Homo sapiens]
          Length = 353

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 199 LIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDRE---PLRTIFLKDVLKTHECLV 255
           ++K G+ VK+G++  +WK R+F L   T+ Y+K E  R    P   I L     T  CL 
Sbjct: 5   VLKEGFLVKRGHIVHNWKARWFILRQNTLVYYKLEGGRRVTPPKGRILLDGCTITCPCL- 63

Query: 256 KSGDLLMRDNLFEIITSSRT-FYVQADSPEDMHSWIKEIGAAVQA 299
              +   R  L ++ T + T ++++A S E+  +W  EI  A+ A
Sbjct: 64  ---EYENRPLLIKLKTQTSTEYFLEACSREERDAWAFEITGAIHA 105



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 199 LIKSGYCVKQGNVRKSWKRRFFAL---DDFTICYFKCEQDREPLRTIFLKDVLKT--HEC 253
           ++K GY  KQG+ RK+WK R F L     F   Y   +++  P+    L+  L +   + 
Sbjct: 248 VVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDN 307

Query: 254 LVKSG-DLLMRDNLFEIITSSRT-FYVQADSPEDMHSWIKEI 293
            V +G    ++ NLF++IT   T +Y+QA S  +   WI+ I
Sbjct: 308 GVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAI 349


>gi|4758964 cytohesin 1 isoform 1 [Homo sapiens]
          Length = 398

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 25/138 (18%)

Query: 201 KSGYCVKQGNVR-KSWKRRFFALDDFTICYFKCEQDRE-----PLRTIFLKDV--LKTHE 252
           + G+ +K G  R K+WKRR+F L D  + YF+   D+E     PL  + +++V   K   
Sbjct: 263 REGWLLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPN 322

Query: 253 CLVKSGDLLMRDNLFEIITSSRT-------------FYVQADSPEDMHSWIKEIGAAVQA 299
           C     +L + DN  ++I + +T             + + A +PE+   WIK I AA+  
Sbjct: 323 CF----ELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIKAAISR 378

Query: 300 LKCHPRETSFSRSISLTR 317
              +    +  + +S T+
Sbjct: 379 DPFYEMLAARKKKVSSTK 396


>gi|93102364 SWAP-70 protein [Homo sapiens]
          Length = 585

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 199 LIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVKS- 257
           ++K GY +K+G+ RK+W  R+F L    I Y+  E  ++        D+L    C V+S 
Sbjct: 211 VLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDK-----KGDILLDENCCVESL 265

Query: 258 GDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQALK 301
            D   +  LF +    +TF + A   +    WI+ I + +  LK
Sbjct: 266 PDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLK 309


>gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo
            sapiens]
          Length = 1054

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 21/223 (9%)

Query: 79   PFCFVINALSQRYFLQANDQKDMKDWVEALNQASKITVPKGGG-----LPMTTEVLKSLA 133
            P CF I A  +   + A+ + + + W+  LN A  I   K GG     LP  T   +   
Sbjct: 818  PHCFTIYAAQKTIVVAASTRLEKEKWMLDLNSA--IQAAKSGGDTAPALPGRTVCTR--- 872

Query: 134  APPALEKKPQVAYKTEIIGGVVVHTPISQNGGDGQEGSEPGSHTILRRSQSYIPTSGCRA 193
             PP    +  +  ++E     V     S   G GQ  +    H    R+ S    S    
Sbjct: 873  -PPRSPNEVSLEQESEDDARGVR----SSLEGHGQHRANTTMHVCWYRNTS---VSRADH 924

Query: 194  STGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHEC 253
            S       SGY +++      W++ +    +F + ++K  QD  PL ++    +L     
Sbjct: 925  SAAVENQLSGYLLRKFKNSHGWQKLWVVFTNFCLFFYKTHQDDYPLASL---PLLGYSVS 981

Query: 254  LVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAA 296
            + +  D + +D +F++   S  ++ +A+S      W++ I  A
Sbjct: 982  IPREADGIHKDYVFKLQFKSHVYFFRAESKYTFERWMEVIQGA 1024


>gi|239047795 pleckstrin homology domain containing, family A member
           7 [Homo sapiens]
          Length = 1121

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 24/130 (18%)

Query: 192 RASTGPPLIKSGYCVKQGNV-RKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKT 250
           R +   P++  G+  KQ +   + WKRR+F L D+ + Y+K  ++   L +I L   + +
Sbjct: 158 RRNPNVPVVVRGWLHKQDSSGMRLWKRRWFVLADYCLFYYKDSREEAVLGSIPLPSYVIS 217

Query: 251 HECLVKSGDLLMRDNLFEII--------------------TSSRTFYVQADSPEDMHSWI 290
               V   D + R   F+ +                    +  RT+Y  AD+ EDM++W+
Sbjct: 218 P---VAPEDRISRKYSFKAVHTGMRALIYNSSTAGSQAEQSGMRTYYFSADTQEDMNAWV 274

Query: 291 KEIGAAVQAL 300
           + +  A Q L
Sbjct: 275 RAMNQAAQVL 284



 Score = 35.4 bits (80), Expect = 0.099
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 16/117 (13%)

Query: 12  GFLDIEEHENSGKFLRRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQLTYISKVSIAT 71
           G+L  ++      + RR+F+L     CL +Y D+ +   +G+  + +  ++ ++     +
Sbjct: 169 GWLHKQDSSGMRLWKRRWFVLADY--CLFYYKDSREEAVLGSIPLPSYVISPVAPEDRIS 226

Query: 72  PKQKPKTPF----CFVINALS----------QRYFLQANDQKDMKDWVEALNQASKI 114
            K   K         + N+ +          + Y+  A+ Q+DM  WV A+NQA+++
Sbjct: 227 RKYSFKAVHTGMRALIYNSSTAGSQAEQSGMRTYYFSADTQEDMNAWVRAMNQAAQV 283


>gi|46370073 GRB2-associated binding protein 1 isoform b [Homo
           sapiens]
          Length = 694

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)

Query: 195 TGPPLIKSGYCVKQGNVRK----SWKRRFFAL-------DDFTICYFKCEQDREPLRTIF 243
           +G  ++ SG+  K    +K    +WKRR+F L       D   + Y+K +  ++P+R I 
Sbjct: 2   SGGEVVCSGWLRKSPPEKKLKRYAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIID 61

Query: 244 LKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIK 291
           L    +    L  +        +F+I T  R FY+ ADS E+M+ W++
Sbjct: 62  LNLCQQVDAGLTFNKKEFENSYIFDINTIDRIFYLVADSEEEMNKWVR 109


>gi|46370071 GRB2-associated binding protein 1 isoform a [Homo
           sapiens]
          Length = 724

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)

Query: 195 TGPPLIKSGYCVKQGNVRK----SWKRRFFAL-------DDFTICYFKCEQDREPLRTIF 243
           +G  ++ SG+  K    +K    +WKRR+F L       D   + Y+K +  ++P+R I 
Sbjct: 2   SGGEVVCSGWLRKSPPEKKLKRYAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIID 61

Query: 244 LKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIK 291
           L    +    L  +        +F+I T  R FY+ ADS E+M+ W++
Sbjct: 62  LNLCQQVDAGLTFNKKEFENSYIFDINTIDRIFYLVADSEEEMNKWVR 109


>gi|154354979 myosin X [Homo sapiens]
          Length = 2058

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 200  IKSGYCVKQGN-----VRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECL 254
            +K G+  K+G       R++WK+R+F L    + YF+ + + +   T+   +V    E +
Sbjct: 1214 LKQGWLHKKGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTV---EVRTAKEII 1270

Query: 255  VKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSW 289
                D   ++N  +II + RTF++ A+SPED   W
Sbjct: 1271 ----DNTTKENGIDIIMADRTFHLIAESPEDASQW 1301



 Score = 37.4 bits (85), Expect = 0.026
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 263  RDNLFEIITSSRTFYVQADSPEDMHSWI 290
            R N F IIT++R  +  AD+PE+MH WI
Sbjct: 1349 RPNSFVIITANRVLHCNADTPEEMHHWI 1376


>gi|219689123 pleckstrin homology domain containing, family A member
           5 isoform 2 [Homo sapiens]
          Length = 1105

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 188 TSGCRASTGPPLIKSGYCVKQGNV-RKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKD 246
           ++  + +   P+++ G+  KQ +   K WK+R+F L D  + Y++ E++   L +I L  
Sbjct: 51  SNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPS 110

Query: 247 VLKTHECLVKSGDLLMRDNLFEII-TSSRTFYVQADSPEDMHSWIK 291
                  L+ S D + R   F+    + RT+Y   D+ ++M  W+K
Sbjct: 111 F---QIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMK 153


>gi|19923493 pleckstrin homology domain containing, family A member
           5 isoform 1 [Homo sapiens]
          Length = 1116

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 188 TSGCRASTGPPLIKSGYCVKQGNV-RKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKD 246
           ++  + +   P+++ G+  KQ +   K WK+R+F L D  + Y++ E++   L +I L  
Sbjct: 159 SNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPS 218

Query: 247 VLKTHECLVKSGDLLMRDNLFEII-TSSRTFYVQADSPEDMHSWIK 291
                  L+ S D + R   F+    + RT+Y   D+ ++M  W+K
Sbjct: 219 F---QIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMK 261


>gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo
           sapiens]
          Length = 1214

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 14/133 (10%)

Query: 159 PISQNGGDGQEGSEPGSHTILRRSQSYIPTSG-CRASTGPPLIKSGYCVKQGNVRKSWKR 217
           P  +   D +  +EPGS   L R  S   TSG  R  T   +IK G   KQ N  +  KR
Sbjct: 19  PPPEESSDSEPEAEPGSPQKLIRKVS---TSGQIRQKT---IIKEGMLTKQNNSFQRSKR 72

Query: 218 RFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFY 277
           R+F L   T+ Y K        ++I   +V  T   + +S    + +N F +IT  R   
Sbjct: 73  RYFKLRGRTLYYAK------TAKSIIFDEVDLTDASVAESSTKNV-NNSFTVITPCRKLI 125

Query: 278 VQADSPEDMHSWI 290
           + AD+ ++M  WI
Sbjct: 126 LCADNRKEMEDWI 138


>gi|38201692 RAS p21 protein activator 3 [Homo sapiens]
          Length = 834

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 9/99 (9%)

Query: 197 PPLIKSGYCVKQGNVRK-----SWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTH 251
           P ++K G+ +K+   RK     ++K+R+F L +    Y K + D +PL +I ++++L   
Sbjct: 575 PIVLKEGFMIKRAQGRKRFGMKNFKKRWFRLTNHEFTYHKSKGD-QPLYSIPIENILAVE 633

Query: 252 ECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWI 290
           +   +S  +    N+F++I   R  Y+QA++  +   WI
Sbjct: 634 KLEEESFKM---KNMFQVIQPERALYIQANNCVEAKDWI 669


>gi|24432056 hypothetical protein LOC144717 [Homo sapiens]
          Length = 249

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 15/198 (7%)

Query: 193 ASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHE 252
           A+   P+  +G+  K+G    ++ RR+F L    + YF+    REP+  I L+    T E
Sbjct: 12  ATCDAPVDNAGFLYKKGGRHAAYHRRWFVLRGNMLFYFEDAASREPVGVIILEGC--TVE 69

Query: 253 CLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIG-AAVQALKCHPRETSFSR 311
            +  + +           T +RT+ + A+S + M  W+K +  A+   L+   RE    +
Sbjct: 70  LVEAAEEFAFAVRFAG--TRARTYVLAAESQDAMEGWVKALSRASFDYLRLVVRE--LEQ 125

Query: 312 SISLTRPGSSSLSSGPNSILCRGRPPLEEKKALCKAPSVASSWQPWTPVP-QAGEKLLPP 370
            ++  R G       P        P L    AL   PS+ S+  P   +P       LPP
Sbjct: 126 QLAAVRGGGGMALPQPQPQSLPLPPSL--PSALAPVPSLPSAPAPVPALPLPRRPSALPP 183

Query: 371 GDT-----SEDSLFTPRP 383
            +      S ++ F P P
Sbjct: 184 KENGCAVWSTEATFRPGP 201


>gi|4758968 cytohesin 3 [Homo sapiens]
          Length = 399

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 28/119 (23%)

Query: 201 KSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLRTIFLKDVLKTHECLVKSGDL 260
           + G+ +K G   K+WKRR+F L D  + YF+   D+EP      + ++      ++  + 
Sbjct: 267 REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEP------RGIIPLENLSIREVED 320

Query: 261 LMRDNLFEIITSSR----------------------TFYVQADSPEDMHSWIKEIGAAV 297
             + N FE+   S                        + + A SPE+   W+K I A++
Sbjct: 321 PRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 379


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,050,605
Number of Sequences: 37866
Number of extensions: 984609
Number of successful extensions: 3617
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 3373
Number of HSP's gapped (non-prelim): 321
length of query: 425
length of database: 18,247,518
effective HSP length: 105
effective length of query: 320
effective length of database: 14,271,588
effective search space: 4566908160
effective search space used: 4566908160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press