Guide to the Human Genome
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Name: FAM156B Sequence: fasta or formatted (213aa) NCBI GI: 153791171
Description:

family with sequence similarity 156, member B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         12           2
 C cysteine            1.4          3           1
 D aspartate           1.4          3           1
 E glutamate          10.3         22           2
 F phenylalanine       1.9          4           1
 G glycine             6.1         13           1
 H histidine           2.3          5           1
 I isoleucine          1.4          3           1
 K lysine              3.8          8           2
 L leucine            10.3         22           2
 M methionine          2.8          6           2
 N asparagine          3.3          7           1
 P proline            10.8         23           1
 Q glutamine           8.5         18           2
 R arginine           11.7         25           3
 S serine              9.9         21           2
 T threonine           3.3          7           1
 V valine              1.9          4           1
 W tryptophan          1.4          3           1
 Y tyrosine            1.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 156, member B [Homo... 
FAM156A               1.000   family with sequence similarity 156, member A 
LOC100127919          0.048   PREDICTED: similar to stella 
LOC100127919          0.048   PREDICTED: similar to stella 
LOC100127919          0.048   PREDICTED: similar to developmental pluripotency-as...
DPPA3                 0.041   stella 
LOC100131102          0.036   PREDICTED: hypothetical protein 
LOC100131102          0.036   PREDICTED: hypothetical protein 
CCDC102A              0.034   coiled-coil domain containing 102A 
ANKRD24               0.029   ankyrin repeat domain 24 
LOC644794             0.029   PREDICTED: hypothetical protein 
LOC644794             0.029   PREDICTED: hypothetical protein 
LOC644794             0.029   PREDICTED: hypothetical protein 
LOC644794             0.029   PREDICTED: hypothetical protein 
EIF5B                 0.027   eukaryotic translation initiation factor 5B 
ARMC5                 0.027   armadillo repeat containing 5 isoform b 
MAP7D1                0.027   MAP7 domain containing 1 
NFATC4                0.024   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.024   nuclear factor of activated T-cells, cytoplasmic, ca...
LOC100293644          0.024   PREDICTED: hypothetical protein 
LOC100287563          0.024   PREDICTED: hypothetical protein 
LOC100287563          0.024   PREDICTED: hypothetical protein XP_002343733 
ZNF541                0.024   zinc finger protein 541 
AAK1                  0.024   AP2 associated kinase 1 
LOC100130982          0.024   PREDICTED: hypothetical protein 
LOC100130982          0.024   PREDICTED: hypothetical protein 
LOC100130982          0.024   PREDICTED: hypothetical protein 
BAI1                  0.022   brain-specific angiogenesis inhibitor 1 precursor [...
KIAA1949              0.022   phostensin 
KIAA1949              0.022   phostensin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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