Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 15147250
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15147250 protein phosphatase 1, regulatory (inhibitor)
subunit 14A [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15147250 protein phosphatase 1, regulatory (inhibitor) subuni... 295 7e-81
gi|239755567 PREDICTED: similar to protein phosphatase 1 regulat... 95 2e-20
gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo s... 95 2e-20
gi|19311006 protein phosphatase 1, regulatory (inhibitor) subuni... 93 9e-20
gi|8923226 protein phosphatase 1, regulatory subunit 14D isoform... 84 6e-17
gi|73390140 LIM domain kinase 2 isoform 1 [Homo sapiens] 77 5e-15
gi|194306647 protein phosphatase 1, regulatory subunit 14D isofo... 50 7e-07
gi|4507447 transcription factor AP-4 (activating enhancer bindin... 34 0.050
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 33 0.066
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 33 0.11
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 31 0.33
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 31 0.33
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 30 0.55
gi|19923796 NMD3 homolog [Homo sapiens] 30 0.72
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 30 0.95
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 30 0.95
gi|40254924 leucine rich repeat containing 59 [Homo sapiens] 30 0.95
gi|20149304 ISY1 splicing factor homolog [Homo sapiens] 29 1.2
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 29 1.2
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 29 1.2
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 29 1.2
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 29 1.2
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 29 1.2
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 29 1.6
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 29 1.6
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 29 1.6
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens] 29 1.6
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 29 1.6
gi|5031981 proteasome 26S subunit, non-ATPase 14 [Homo sapiens] 28 2.1
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 28 2.1
>gi|15147250 protein phosphatase 1, regulatory (inhibitor) subunit
14A [Homo sapiens]
Length = 147
Score = 295 bits (756), Expect = 7e-81
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MAAQRLGKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRL 60
MAAQRLGKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRL
Sbjct: 1 MAAQRLGKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRL 60
Query: 61 EELYRGMEADMPDEINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
EELYRGMEADMPDEINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR
Sbjct: 61 EELYRGMEADMPDEINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
Query: 121 QPGLRQPSPSHDGSLSPLQDRARTAHP 147
QPGLRQPSPSHDGSLSPLQDRARTAHP
Sbjct: 121 QPGLRQPSPSHDGSLSPLQDRARTAHP 147
>gi|239755567 PREDICTED: similar to protein phosphatase 1 regulatory
subunit 14B [Homo sapiens]
Length = 147
Score = 94.7 bits (234), Expect = 2e-20
Identities = 49/116 (42%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 7 GKRVLSKLQSPSRARGPGGSPG-GLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYR 65
G RV + + GPGG+ G +R +VTVKYDR+EL++RL++E+WI +L LY
Sbjct: 25 GPRVYFQSPPGAAGEGPGGADDEGPVRRQGKVTVKYDRKELRKRLNLEEWILEQLTRLYD 84
Query: 66 GMEADMPD-EINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
E ++P+ EI++DELL++ES++ R+ +++ LL C KP E FI LL K++G+ +
Sbjct: 85 CQEEEIPELEIDVDELLDMESDDARAARVKELLVDCYKPTEAFISGLLDKIRGMQK 140
>gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo
sapiens]
Length = 147
Score = 94.7 bits (234), Expect = 2e-20
Identities = 49/116 (42%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 7 GKRVLSKLQSPSRARGPGGSPG-GLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYR 65
G RV + + GPGG+ G +R +VTVKYDR+EL++RL++E+WI +L LY
Sbjct: 25 GPRVYFQSPPGAAGEGPGGADDEGPVRRQGKVTVKYDRKELRKRLNLEEWILEQLTRLYD 84
Query: 66 GMEADMPD-EINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
E ++P+ EI++DELL++ES++ R+ +++ LL C KP E FI LL K++G+ +
Sbjct: 85 CQEEEIPELEIDVDELLDMESDDARAARVKELLVDCYKPTEAFISGLLDKIRGMQK 140
>gi|19311006 protein phosphatase 1, regulatory (inhibitor) subunit
14C [Homo sapiens]
Length = 165
Score = 92.8 bits (229), Expect = 9e-20
Identities = 46/93 (49%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Query: 31 QKRH--ARVTVKYDRRELQRRLDVEKWIDGRLEELYRGMEADMPD-EINIDELLELESEE 87
Q+RH +VTVKYDR+EL++RL +E+WI +L +LY E +MP+ EI+ID+LL+ +S+E
Sbjct: 64 QRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDADSDE 123
Query: 88 ERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
ER+ K+Q L C KP E+FI+ELL++++G+ +
Sbjct: 124 ERASKLQEALVDCYKPTEEFIKELLSRIRGMRK 156
>gi|8923226 protein phosphatase 1, regulatory subunit 14D isoform 1
[Homo sapiens]
Length = 145
Score = 83.6 bits (205), Expect = 6e-17
Identities = 42/114 (36%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Query: 7 GKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRG 66
G+R S S S++ P S +R +R+TVKYDR +LQR L++E+W+D +++EL++
Sbjct: 28 GRRRTSSTDSESKSH-PDSSKIPRSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELFQD 86
Query: 67 MEADMPDEINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
EI+++ L++L +EE+++ +++ +L +C +P E FI ELL++L+ L R
Sbjct: 87 QATPSEPEIDLEALMDLSTEEQKT-QLEAILGNCPRPTEAFISELLSQLKKLRR 139
>gi|73390140 LIM domain kinase 2 isoform 1 [Homo sapiens]
Length = 686
Score = 77.0 bits (188), Expect = 5e-15
Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
Query: 10 VLSKLQSPSRA------RGPG-GSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEE 62
+ +L+ SRA GPG G +R +VT+KYD +EL++ L++E+WI +L
Sbjct: 561 ICCRLEPESRAPPGAAGEGPGCADDEGPVRRQGKVTIKYDPKELRKHLNLEEWILEQLTR 620
Query: 63 LYRGMEADMPD-EINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
LY E ++ + EI++DELL++ES++ + +++ LL C KP E FI LL K++ + +
Sbjct: 621 LYDCQEEEISELEIDVDELLDMESDDAWASRVKELLVDCYKPTEAFISGLLDKIRAMQK 679
>gi|194306647 protein phosphatase 1, regulatory subunit 14D
isoform 2 [Homo sapiens]
Length = 200
Score = 50.1 bits (118), Expect = 7e-07
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 7 GKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRG 66
G+R S S S++ P S +R +R+TVKYDR +LQR L++E+W+D +++EL++
Sbjct: 28 GRRRTSSTDSESKSH-PDSSKIPRSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELFQS 86
Query: 67 M 67
+
Sbjct: 87 L 87
>gi|4507447 transcription factor AP-4 (activating enhancer binding
protein 4) [Homo sapiens]
Length = 338
Score = 33.9 bits (76), Expect = 0.050
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 8 KRVLSKLQ--SPSRARGPG-----GSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRL 60
KR + +L SP R R GSP + A ++ + EL+++LD E+ + L
Sbjct: 114 KRFIQELSGSSPKRRRAEDKDEGIGSPDIWEDEKAE-DLRREMIELRQQLDKERSVRMML 172
Query: 61 EELYRGMEADM-PDEIN-IDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGL 118
EE R +EA M P+++ I + ++L+ ++E+ R + QE L + Q
Sbjct: 173 EEQVRSLEAHMYPEKLKVIAQQVQLQQQQEQVRLLH--------------QEKLEREQQQ 218
Query: 119 HRQPGLRQPSPSH 131
R L P+P+H
Sbjct: 219 LRTQLLPPPAPTH 231
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 33.5 bits (75), Expect = 0.066
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 13 KLQSPSRARGPGGSPGGLQKRHARVT--VKYDRRELQRRLDVEKWIDGRLEELYRGMEAD 70
K++ ++ RG + GL +T + R +R+LD L L EA
Sbjct: 555 KIRQMAQERGKRSATSGLTTEDLNLTENISQGDRISERKLD--------LLSLKNMSEAQ 606
Query: 71 MPDEINIDELLELESEEERSR----KIQGLLKSC---GKPVEDFIQELLAKLQGLHRQPG 123
+E EL+E E + ERSR K Q LK K +E+ ++E+L ++ + + P
Sbjct: 607 SKNEFLSRELIEKERDLERSRTVIAKFQNKLKELVEENKQLEEGMKEILQAIKEMQKDPD 666
Query: 124 LR 125
++
Sbjct: 667 VK 668
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 32.7 bits (73), Expect = 0.11
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 22 GPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLE---ELYRGMEAD--MPDEIN 76
G GG KR ++ + ++LQ L EKW L+ E Y+G++ PD +
Sbjct: 71 GHGGESNLALKRDDVTLLRQEVQDLQASLKEEKWYSEELKKELEKYQGLQQQEAKPDGLV 130
Query: 77 IDELLELESEEERSRKIQ 94
D EL+S E++ + Q
Sbjct: 131 TDSSAELQSLEQQLEEAQ 148
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 31.2 bits (69), Expect = 0.33
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 8 KRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGM 67
+R ++ SPS + SPG Q A ++ LQ RL + + + EEL +
Sbjct: 102 RRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLRE-ERKQQEELMKAF 160
Query: 68 EADMPDEINIDELLELESEEERSRKIQG 95
E P+E L + E++E + R+ G
Sbjct: 161 ET--PEEKRARRLAKKEAKERKKREKMG 186
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 31.2 bits (69), Expect = 0.33
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 8 KRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGM 67
+R ++ SPS + SPG Q A ++ LQ RL + + + EEL +
Sbjct: 102 RRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLRE-ERKQQEELMKAF 160
Query: 68 EADMPDEINIDELLELESEEERSRKIQG 95
E P+E L + E++E + R+ G
Sbjct: 161 ET--PEEKRARRLAKKEAKERKKREKMG 186
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 30.4 bits (67), Expect = 0.55
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 30 LQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGME---ADMPDEINIDELLELESE 86
+Q+ +RVT + E + + D+E+ + +L EL + D+ D +ELLE E +
Sbjct: 1901 IQEELSRVTKLKETAE-EEKDDLEERLMNQLAELNGSIGNYCQDVTDAQIKNELLESEMK 1959
Query: 87 E------ERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHRQPG 123
E + Q L+K K + +E L K+QG ++PG
Sbjct: 1960 NLKKCVSELEEEKQQLVKEKTKVESEIRKEYLEKIQGAQKEPG 2002
>gi|19923796 NMD3 homolog [Homo sapiens]
Length = 503
Score = 30.0 bits (66), Expect = 0.72
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 41 YDRRELQRRLDVEKWIDGRLEELYRGME-ADMPDEINIDELLELESEEERSRKIQGLLKS 99
YDR + QRR W +L+EL R E D DE + LE E+E RK + +
Sbjct: 408 YDRTKRQRR---RNW---KLKELARERENMDTDDERQYQDFLEDLEEDEAIRKNVNIYRD 461
Query: 100 CGKPVE 105
PVE
Sbjct: 462 SAIPVE 467
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 29.6 bits (65), Expect = 0.95
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 23/101 (22%)
Query: 7 GKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDR--------------RELQRRLDV 52
G + KL SPSR R S +K+H +K + + L+R DV
Sbjct: 278 GIHMHEKLSSPSRKRTIAES----KKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDV 333
Query: 53 EKWIDGRLEELYRGME-----ADMPDEINIDELLELESEEE 88
KW + L++ R ME A+ E+ + +++ EEE
Sbjct: 334 RKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEE 374
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 29.6 bits (65), Expect = 0.95
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 23/101 (22%)
Query: 7 GKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDR--------------RELQRRLDV 52
G + KL SPSR R S +K+H +K + + L+R DV
Sbjct: 524 GIHMHEKLSSPSRKRTIAES----KKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDV 579
Query: 53 EKWIDGRLEELYRGME-----ADMPDEINIDELLELESEEE 88
KW + L++ R ME A+ E+ + +++ EEE
Sbjct: 580 RKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEE 620
>gi|40254924 leucine rich repeat containing 59 [Homo sapiens]
Length = 307
Score = 29.6 bits (65), Expect = 0.95
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 33 RHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGMEADMPDEINIDELLELESEEERSRK 92
+H + RE QRRL+VE+ + + E R EA E+ E E E+ER RK
Sbjct: 146 QHMKAVQADQERERQRRLEVEREAEKKREAKQRAKEA-QERELRKREKAE---EKERRRK 201
Query: 93 IQGLLKSCGKPVE 105
LK+ + E
Sbjct: 202 EYDALKAAKREQE 214
>gi|20149304 ISY1 splicing factor homolog [Homo sapiens]
Length = 285
Score = 29.3 bits (64), Expect = 1.2
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 52 VEKWIDGRLEELYRGM---EADMPDEINIDELLELESEEERSRKIQG 95
VEKW R L RG E + +EINI + E ES+EE S++ G
Sbjct: 186 VEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGG 232
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 29.3 bits (64), Expect = 1.2
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 40 KYDRRELQ--RRLDVEKWIDGRLEELYRGMEADMPDEINI---------DELLELESEEE 88
K ++ELQ L EK + L + + +M E N+ DEL +L+ +EE
Sbjct: 248 KLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEE 307
Query: 89 RSRKIQGLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSPLQDR 141
++ ++ L+ K + ++ L KL+G ++ L + S +H + LQ++
Sbjct: 308 QAERLVKQLEEEAKSRAEELKLLEEKLKG--KEAELEKSSAAHTQATLLLQEK 358
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 29.3 bits (64), Expect = 1.2
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 40 KYDRRELQ--RRLDVEKWIDGRLEELYRGMEADMPDEINI---------DELLELESEEE 88
K ++ELQ L EK + L + + +M E N+ DEL +L+ +EE
Sbjct: 335 KLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEE 394
Query: 89 RSRKIQGLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSPLQDR 141
++ ++ L+ K + ++ L KL+G ++ L + S +H + LQ++
Sbjct: 395 QAERLVKQLEEEAKSRAEELKLLEEKLKG--KEAELEKSSAAHTQATLLLQEK 445
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 29.3 bits (64), Expect = 1.2
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 40 KYDRRELQ--RRLDVEKWIDGRLEELYRGMEADMPDEINI---------DELLELESEEE 88
K ++ELQ L EK + L + + +M E N+ DEL +L+ +EE
Sbjct: 319 KLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEE 378
Query: 89 RSRKIQGLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSPLQDR 141
++ ++ L+ K + ++ L KL+G ++ L + S +H + LQ++
Sbjct: 379 QAERLVKQLEEEAKSRAEELKLLEEKLKG--KEAELEKSSAAHTQATLLLQEK 429
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 29.3 bits (64), Expect = 1.2
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 40 KYDRRELQ--RRLDVEKWIDGRLEELYRGMEADMPDEINI---------DELLELESEEE 88
K ++ELQ L EK + L + + +M E N+ DEL +L+ +EE
Sbjct: 334 KLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEE 393
Query: 89 RSRKIQGLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSPLQDR 141
++ ++ L+ K + ++ L KL+G ++ L + S +H + LQ++
Sbjct: 394 QAERLVKQLEEEAKSRAEELKLLEEKLKG--KEAELEKSSAAHTQATLLLQEK 444
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 29.3 bits (64), Expect = 1.2
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 45 ELQRRLDVEKWIDGRLEELYRGMEADMPDEINIDELLELESEEERSRKIQGLLKSCGKPV 104
EL++ L + + EE R ++A+M ++I + +E SEEER +Q L + V
Sbjct: 415 ELEKALSTAQ----KTEEARRKLKAEMDEQI---KTIEKTSEEERI-SLQQELSRVKQEV 466
Query: 105 EDFI----QELLAKLQGLHRQ 121
D + +E +AKLQ LH +
Sbjct: 467 VDVMKKSSEEQIAKLQKLHEK 487
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 28.9 bits (63), Expect = 1.6
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 31 QKRHARVTVKYDRRELQRRLDVEKWIDGRLEELY------RGMEADMPDEINIDELLELE 84
QK R + RRE ++R EK RLE++ +A+ E +L E
Sbjct: 401 QKEERRRVEEQQRREREQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRKQLEEQR 460
Query: 85 SEEERSRKIQ---GLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSP 137
E R++Q LKS + + Q+ L K Q PG R+P + ++P
Sbjct: 461 QSERLQRQLQQEHAYLKSLQQQQQ---QQQLQKQQQQQLLPGDRKPLYHYGRGMNP 513
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 28.9 bits (63), Expect = 1.6
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 31 QKRHARVTVKYDRRELQRRLDVEKWIDGRLEELY------RGMEADMPDEINIDELLELE 84
QK R + RRE ++R EK RLE++ +A+ E +L E
Sbjct: 401 QKEERRRVEEQQRREREQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRKQLEEQR 460
Query: 85 SEEERSRKIQ---GLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSP 137
E R++Q LKS + + Q+ L K Q PG R+P + ++P
Sbjct: 461 QSERLQRQLQQEHAYLKSLQQQQQ---QQQLQKQQQQQLLPGDRKPLYHYGRGMNP 513
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 28.9 bits (63), Expect = 1.6
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 31 QKRHARVTVKYDRRELQRRLDVEKWIDGRLEELY------RGMEADMPDEINIDELLELE 84
QK R + RRE ++R EK RLE++ +A+ E +L E
Sbjct: 401 QKEERRRVEEQQRREREQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRKQLEEQR 460
Query: 85 SEEERSRKIQ---GLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSP 137
E R++Q LKS + + Q+ L K Q PG R+P + ++P
Sbjct: 461 QSERLQRQLQQEHAYLKSLQQQQQ---QQQLQKQQQQQLLPGDRKPLYHYGRGMNP 513
>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
Length = 1295
Score = 28.9 bits (63), Expect = 1.6
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 31 QKRHARVTVKYDRRELQRRLDVEKWIDGRLEELY------RGMEADMPDEINIDELLELE 84
QK R + RRE ++R EK RLE++ +A+ E +L E
Sbjct: 401 QKEERRRVEEQQRREREQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRKQLEEQR 460
Query: 85 SEEERSRKIQ---GLLKSCGKPVEDFIQELLAKLQGLHRQPGLRQPSPSHDGSLSP 137
E R++Q LKS + + Q+ L K Q PG R+P + ++P
Sbjct: 461 QSERLQRQLQQEHAYLKSLQQQQQ---QQQLQKQQQQQLLPGDRKPLYHYGRGMNP 513
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 28.9 bits (63), Expect = 1.6
Identities = 18/73 (24%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 40 KYDRRELQRRLDVEKWIDGRLEELYRGMEADMPDEINIDELLELESEEERSRKIQGL--L 97
K ++ + Q LD+EK ++ + ++ E + +++ IDE++ EE++ K Q L +
Sbjct: 179 KRNKAKAQYYLDLEKQLEEQEKKKQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKM 238
Query: 98 KSCGKPVEDFIQE 110
+ + +E+F +E
Sbjct: 239 NAMRRYIEEFQKE 251
>gi|5031981 proteasome 26S subunit, non-ATPase 14 [Homo sapiens]
Length = 310
Score = 28.5 bits (62), Expect = 2.1
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 29 GLQKRHARVTVKYDRRELQRR----LDVEKWIDGRLEELYRGMEADMPDEINIDELLELE 84
GL + + +T+ Y + EL+++ L + W++G + Y E +E + E+LEL
Sbjct: 195 GLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDY--SEHCKHNESVVKEMLELA 252
Query: 85 -------SEEERSRKIQGLLKSCGK 102
EE++ Q +K+ GK
Sbjct: 253 KNYNKAVEEEDKMTPEQLAIKNVGK 277
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 28.5 bits (62), Expect = 2.1
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 30 LQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGMEADMPD--EINIDELLELESEE 87
L+++H+++T ++ LQ +L E + EE+ + A + EI + LE EE
Sbjct: 878 LEQKHSQLTE--EKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEE 935
Query: 88 ERSRKIQGLLKSCGKPVEDFIQEL 111
+R +++Q K + + D ++L
Sbjct: 936 DRGQQLQAERKKMAQQMLDLEEQL 959
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,474,898
Number of Sequences: 37866
Number of extensions: 311256
Number of successful extensions: 1367
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1327
Number of HSP's gapped (non-prelim): 81
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.