Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BTBD9 Sequence: fasta or formatted (544aa) NCBI GI: 151108435
Description:

BTB (POZ) domain containing 9 isoform b

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [612aa] BTB (POZ) domain containing 9 isoform a
alt prot [612aa] BTB (POZ) domain containing 9 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         32           2
 C cysteine            2.9         16           2
 D aspartate           6.2         34           3
 E glutamate           6.6         36           2
 F phenylalanine       3.5         19           1
 G glycine             4.6         25           1
 H histidine           2.8         15           1
 I isoleucine          5.9         32           2
 K lysine              3.9         21           1
 L leucine            10.3         56           3
 M methionine          2.9         16           1
 N asparagine          4.6         25           1
 P proline             3.7         20           1
 Q glutamine           4.6         25           3
 R arginine            5.3         29           1
 S serine              9.9         54           2
 T threonine           5.5         30           2
 V valine              5.9         32           2
 W tryptophan          1.5          8           1
 Y tyrosine            3.5         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB (POZ) domain containing 9 isoform b 
BTBD9                 1.000   BTB (POZ) domain containing 9 isoform a 
BTBD9                 1.000   BTB (POZ) domain containing 9 isoform a 
BTBD6                 0.055   BTB domain protein BDPL 
BTBD3                 0.051   BTB/POZ domain containing protein 3 isoform a 
BTBD3                 0.051   BTB/POZ domain containing protein 3 isoform b 
BTBD1                 0.048   BTB (POZ) domain containing 1 isoform 2 
BTBD1                 0.048   BTB (POZ) domain containing 1 isoform 1 
LOC149478             0.047   hypothetical protein LOC149478 
BTBD2                 0.046   BTB (POZ) domain containing 2 
KLHL20                0.041   kelch-like 20 
KLHL3                 0.039   kelch-like 3 
KLHL17                0.033   kelch-like 17 
KLHL10                0.032   kelch-like 10 
KBTBD8                0.031   T-cell activation kelch repeat protein 
KLHL12                0.031   kelch-like 12 
KLHL25                0.030   BTB/POZ KELCH domain protein 
KLHL24                0.030   DRE1 protein 
KBTBD10               0.030   kelch repeat and BTB (POZ) domain containing 10 [Hom...
KBTBD3                0.029   BTB and kelch domain containing 3 
KBTBD3                0.029   BTB and kelch domain containing 3 
KLHL2                 0.029   kelch-like 2, Mayven isoform 3 
KLHL2                 0.029   kelch-like 2, Mayven isoform 2 
KLHL2                 0.029   kelch-like 2, Mayven isoform 1 
SPOP                  0.027   speckle-type POZ protein 
SPOP                  0.027   speckle-type POZ protein 
SPOP                  0.027   speckle-type POZ protein 
SPOP                  0.027   speckle-type POZ protein 
SPOP                  0.027   speckle-type POZ protein 
SPOP                  0.027   speckle-type POZ protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press