CCDC43 5123

Name: CCDC43	Sequence: fasta or formatted (154aa)		NCBI GI: 151101335
Description: coiled-coil domain containing 43 isoform 2		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [224aa] coiled-coil domain containing 43 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.0 17 2 C cysteine 1.9 3 1 D aspartate 5.8 9 1 E glutamate 14.3 22 6 F phenylalanine 1.3 2 1 G glycine 9.1 14 5 H histidine 0.6 1 1 I isoleucine 5.8 9 1 K lysine 6.5 10 2 L leucine 9.1 14 2 M methionine 1.3 2 1 N asparagine 1.3 2 1 P proline 3.2 5 1 Q glutamine 5.8 9 1 R arginine 3.9 6 1 S serine 4.5 7 1 T threonine 2.6 4 1 V valine 8.4 13 2 W tryptophan 1.3 2 1 Y tyrosine 1.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 43 isoform 2 CCDC43 0.904 coiled-coil domain containing 43 isoform 1 DNAJC2 0.032 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ... DNAJC2 0.032 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform... ARGLU1 0.032 arginine and glutamate rich 1 KIAA0232 0.029 hypothetical protein LOC9778 KIAA0232 0.029 hypothetical protein LOC9778 FAM169A 0.029 hypothetical protein LOC26049 EIF5B 0.025 eukaryotic translation initiation factor 5B LOC727962 0.025 PREDICTED: similar to collagen, type I, alpha 2 [Ho... LOC653203 0.025 PREDICTED: hypothetical protein ZC3H6 0.025 zinc finger CCCH-type domain containing 6 SCLT1 0.021 sodium channel associated protein 1 CCDC41 0.018 NY-REN-58 antigen CCDC41 0.018 NY-REN-58 antigen PVRL2 0.018 poliovirus receptor related 2 isoform alpha precursor... CEP250 0.018 centrosomal protein 2 SMARCA4 0.018 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.018 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.018 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.018 SWI/SNF-related matrix-associated actin-dependent r... LOC100288658 0.018 PREDICTED: hypothetical protein XP_002342750 LOC100288658 0.018 PREDICTED: hypothetical protein MYO10 0.018 myosin X TPR 0.018 nuclear pore complex-associated protein TPR NUMA1 0.018 nuclear mitotic apparatus protein 1 CHD2 0.018 chromodomain helicase DNA binding protein 2 isoform... CHD2 0.018 chromodomain helicase DNA binding protein 2 isoform... WDR87 0.014 NYD-SP11 protein RFC1 0.014 replication factor C large subunit Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.