Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 149588874
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149588874 transmembrane protein 91 isoform d [Homo sapiens] 265 5e-72
gi|110578660 transmembrane protein 91 isoform b [Homo sapiens] 253 2e-68
gi|154707844 transmembrane protein 91 isoform a [Homo sapiens] 252 6e-68
gi|149588708 transmembrane protein 91 isoform c [Homo sapiens] 252 6e-68
gi|149588687 transmembrane protein 91 isoform c [Homo sapiens] 252 6e-68
gi|149588540 transmembrane protein 91 isoform e [Homo sapiens] 252 6e-68
gi|157743286 transmembrane protein 90A [Homo sapiens] 59 1e-09
gi|13376347 hypothetical protein LOC79953 [Homo sapiens] 58 2e-09
gi|77681565 NG5 protein [Homo sapiens] 39 8e-04
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 33 0.059
gi|70608155 phosphodiesterase 3A [Homo sapiens] 32 0.13
gi|100913209 heat shock transcription factor 4 isoform b [Homo s... 31 0.29
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 30 0.65
gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens] 29 0.85
gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens] 29 0.85
gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens] 29 0.85
gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens] 29 0.85
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 29 1.1
gi|22027651 adaptor-related protein complex 1 beta 1 subunit iso... 28 1.5
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 28 1.9
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 28 1.9
gi|222136575 interleukin 10 receptor, alpha precursor [Homo sapi... 28 2.5
gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens] 28 2.5
gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens] 28 2.5
gi|118918413 MICAL C-terminal like [Homo sapiens] 28 2.5
gi|155969701 espin-like [Homo sapiens] 28 2.5
gi|221316616 extracellular matrix protein 1 isoform 2 precursor ... 27 3.2
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 27 3.2
gi|221316614 extracellular matrix protein 1 isoform 1 precursor ... 27 3.2
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens] 27 3.2
>gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]
Length = 127
Score = 265 bits (678), Expect = 5e-72
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
Query: 121 LPLQPSL 127
LPLQPSL
Sbjct: 121 LPLQPSL 127
>gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]
Length = 139
Score = 253 bits (647), Expect = 2e-68
Identities = 121/122 (99%), Positives = 121/122 (99%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
Query: 121 LP 122
P
Sbjct: 121 HP 122
>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
Length = 172
Score = 252 bits (643), Expect = 6e-68
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
>gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]
Length = 133
Score = 252 bits (643), Expect = 6e-68
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
>gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]
Length = 133
Score = 252 bits (643), Expect = 6e-68
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
>gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]
Length = 123
Score = 252 bits (643), Expect = 6e-68
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
>gi|157743286 transmembrane protein 90A [Homo sapiens]
Length = 238
Score = 58.5 bits (140), Expect = 1e-09
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
Query: 111 GIAAFCLAQ 119
GIAAF +Q
Sbjct: 177 GIAAFYFSQ 185
>gi|13376347 hypothetical protein LOC79953 [Homo sapiens]
Length = 258
Score = 58.2 bits (139), Expect = 2e-09
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 75 SDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
SD SD + P DHLGL+VFSMLCCFWP+GIAAF L+ +
Sbjct: 161 SDYSSDTESEDNFLMMPPRDHLGLSVFSMLCCFWPLGIAAFYLSHE 206
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 39.3 bits (90), Expect = 8e-04
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 92 PHDHLGLAVFSMLCCFWPVGIAA 114
PHD++ +AV + +CCFWP GI A
Sbjct: 220 PHDYMPIAVLTTICCFWPTGIIA 242
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 33.1 bits (74), Expect = 0.059
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 62 GEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLA 118
G PR SS + +GG P D++ LA+ S C WPV I AF A
Sbjct: 237 GSPRGSLSRHPSSQLAGPGVEGGEGTQK--PRDYIILAILSCFCPMWPVNIVAFAYA 291
>gi|70608155 phosphodiesterase 3A [Homo sapiens]
Length = 1141
Score = 32.0 bits (71), Expect = 0.13
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 83 GGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKLPLQPSL 127
GG+RLSP+L L +FS+LC F+ +G+ +LPL +L
Sbjct: 122 GGARLSPWLQPSAL---LFSLLCAFFWMGLYLLRAGVRLPLAVAL 163
>gi|100913209 heat shock transcription factor 4 isoform b [Homo
sapiens]
Length = 492
Score = 30.8 bits (68), Expect = 0.29
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 7 RELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG--EP 64
R+L L EG+ C TPA+ G+ L++ F +S PLP + GL
Sbjct: 207 RKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQS---------PLPETNLGLSPHRA 257
Query: 65 RPPDVEDMSSSDSDSDWDGGSRLSP 89
R P + D+ DS G+RLSP
Sbjct: 258 RGPIISDI---PEDSPSPEGTRLSP 279
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 29.6 bits (65), Expect = 0.65
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Query: 18 ECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-EPRPPDVEDMSSSD 76
+ + PA++P R + L+ R + +PP PS+ +GLG EP PP + SS +
Sbjct: 1367 QLQAPAERPLRLQRSPVLK--------RRPKLEAPPSPSLGSGLGTEPLPPQPTEPSSPE 1418
>gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 0.85
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 24 QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
QKP H P + F L +S GLG P +SD W
Sbjct: 38 QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90
Query: 84 GSRLSPFLPHDHLG 97
P+ P HLG
Sbjct: 91 ACPSFPWCPQTHLG 104
>gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 0.85
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 24 QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
QKP H P + F L +S GLG P +SD W
Sbjct: 38 QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90
Query: 84 GSRLSPFLPHDHLG 97
P+ P HLG
Sbjct: 91 ACPSFPWCPQTHLG 104
>gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 0.85
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 24 QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
QKP H P + F L +S GLG P +SD W
Sbjct: 38 QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90
Query: 84 GSRLSPFLPHDHLG 97
P+ P HLG
Sbjct: 91 ACPSFPWCPQTHLG 104
>gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens]
Length = 398
Score = 29.3 bits (64), Expect = 0.85
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 20 ETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDS 79
+ P P L S L+++A L FL + S++ G P P D +M S
Sbjct: 224 QPPQDSPAGPNLDSTLQQLA-------LHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPP 276
Query: 80 DWDGGSRLSPFLP 92
G+R SP P
Sbjct: 277 APQVGARSSPKQP 289
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 28.9 bits (63), Expect = 1.1
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 22 PAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-----EPRPPDVEDMSSSD 76
P P R SP A E+ L L PP PSV G EP PP +E +S +
Sbjct: 1519 PPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFE 1578
Query: 77 SDSDWDGGSRLSPFLPH 93
S L+P PH
Sbjct: 1579 KPE-----SPLTPGPPH 1590
>gi|22027651 adaptor-related protein complex 1 beta 1 subunit
isoform a [Homo sapiens]
Length = 949
Score = 28.5 bits (62), Expect = 1.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 42 ESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSP 89
E + G F++PP +V A LG P + D+ S GS ++P
Sbjct: 672 EGIGGTNFVAPPTAAVPANLGAPIGSGLSDLFDLTSGVGTLSGSYVAP 719
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 28.1 bits (61), Expect = 1.9
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 17 TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
TE ETP P E PL ++ + +PP S GLG+ PP ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 28.1 bits (61), Expect = 1.9
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 17 TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
TE ETP P E PL ++ + +PP S GLG+ PP ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476
>gi|222136575 interleukin 10 receptor, alpha precursor [Homo
sapiens]
Length = 578
Score = 27.7 bits (60), Expect = 2.5
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 48 QFLSP-PLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGG 84
QFL P P P LG PP + D SS S + D G
Sbjct: 334 QFLLPDPHPQADRTLGNREPPVLGDSCSSGSSNSTDSG 371
>gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens]
Length = 885
Score = 27.7 bits (60), Expect = 2.5
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 2 DSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGL 61
D PS EL++ L + PAQ+P EI + G + P P + G
Sbjct: 783 DRPSFTELREDLENTLKALPPAQEPD---------EILYVNMDEGGGYPEP--PGAAGGA 831
Query: 62 GEPRPPDVEDMSS 74
P PD +D S
Sbjct: 832 DPPTQPDPKDSCS 844
>gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens]
Length = 894
Score = 27.7 bits (60), Expect = 2.5
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 2 DSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGL 61
D PS EL++ L + PAQ+P EI + G + P P + G
Sbjct: 792 DRPSFTELREDLENTLKALPPAQEPD---------EILYVNMDEGGGYPEP--PGAAGGA 840
Query: 62 GEPRPPDVEDMSS 74
P PD +D S
Sbjct: 841 DPPTQPDPKDSCS 853
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 27.7 bits (60), Expect = 2.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 20 ETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPP 67
E+ +K R GSP R++ +S + L+ L P S S P PP
Sbjct: 413 ESRQRKDIRDLFGSPKRKVLPEDSAQALEKLLQPFKSTSLRQAAPPPP 460
>gi|155969701 espin-like [Homo sapiens]
Length = 1005
Score = 27.7 bits (60), Expect = 2.5
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 52 PPLPSVSAGL--GEPRPPDVEDMSSS 75
P LP +GL GEPRP D E+ S S
Sbjct: 689 PALPKPRSGLASGEPRPGDTEEASDS 714
>gi|221316616 extracellular matrix protein 1 isoform 2 precursor
[Homo sapiens]
Length = 415
Score = 27.3 bits (59), Expect = 3.2
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 22 PAQKPGRHELGSPLRE--IAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSD--- 76
PAQ P E+G PL + + + L LQ + A G+ P+ E +++
Sbjct: 93 PAQLPAEKEVGPPLPQEAVPLQKELPSLQHPNEQKEGTPAPFGDQSHPEPESWNAAQHCQ 152
Query: 77 ---SDSDWDGGSRLSPFLP 92
S W G RL F P
Sbjct: 153 QDRSQGGW--GHRLDGFPP 169
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 27.3 bits (59), Expect = 3.2
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 34 PLREIAFA-ESLRGL--QFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSP 89
P IAF E+ GL + L+PP PS G P P +++ S+ + GGS+ SP
Sbjct: 527 PGSSIAFTQEAQNGLTQEELAPPTPSAP---GTPEPTEMQSPSTREISDLAFGGSQQSP 582
>gi|221316614 extracellular matrix protein 1 isoform 1 precursor
[Homo sapiens]
Length = 540
Score = 27.3 bits (59), Expect = 3.2
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 22 PAQKPGRHELGSPLRE--IAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSD--- 76
PAQ P E+G PL + + + L LQ + A G+ P+ E +++
Sbjct: 93 PAQLPAEKEVGPPLPQEAVPLQKELPSLQHPNEQKEGTPAPFGDQSHPEPESWNAAQHCQ 152
Query: 77 ---SDSDWDGGSRLSPFLP 92
S W G RL F P
Sbjct: 153 QDRSQGGW--GHRLDGFPP 169
>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 27.3 bits (59), Expect = 3.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 19 CETPAQKPGRH---ELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRP 66
C +P +PGRH E R +A G + LS P PS S G P P
Sbjct: 126 CASPC-RPGRHCGPETARRPRPLAGTTFCGGARVLSNPPPSGSGGDARPSP 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,333,331
Number of Sequences: 37866
Number of extensions: 325628
Number of successful extensions: 1336
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 1276
Number of HSP's gapped (non-prelim): 120
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.