HTATIP2 4662

Name: HTATIP2	Sequence: fasta or formatted (276aa)		NCBI GI: 148728166
Description: HIV-1 Tat interactive protein 2, 30kDa isoform a		Not currently referenced in the text
Other entries for this name: alt prot {242aa} HIV-1 Tat interactive protein 2, 30kDa isoform b alt prot {242aa} HIV-1 Tat interactive protein 2, 30kDa isoform b alt prot {133aa} HIV-1 Tat interactive protein 2, 30kDa isoform c alt prot {242aa} HIV-1 Tat interactive protein 2, 30kDa isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 30 6 C cysteine 1.4 4 2 D aspartate 5.4 15 2 E glutamate 7.6 21 2 F phenylalanine 5.1 14 2 G glycine 9.1 25 2 H histidine 1.8 5 1 I isoleucine 1.4 4 1 K lysine 7.6 21 1 L leucine 12.0 33 4 M methionine 1.8 5 1 N asparagine 2.9 8 2 P proline 3.6 10 1 Q glutamine 2.5 7 1 R arginine 6.5 18 2 S serine 6.9 19 2 T threonine 2.5 7 2 V valine 8.3 23 2 W tryptophan 0.7 2 1 Y tyrosine 1.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HIV-1 Tat interactive protein 2, 30kDa isoform a [H... HTATIP2 0.879 HIV-1 Tat interactive protein 2, 30kDa isoform b [H... HTATIP2 0.879 HIV-1 Tat interactive protein 2, 30kDa isoform b [H... HTATIP2 0.879 HIV-1 Tat interactive protein 2, 30kDa isoform b [H... HTATIP2 0.338 HIV-1 Tat interactive protein 2, 30kDa isoform c [H... RDH14 0.015 retinol dehydrogenase 14 (all-trans and 9-cis) [Homo... HOXA13 0.013 homeobox A13 FAM48B1 0.013 hypothetical protein LOC100130302 BLVRB 0.012 biliverdin reductase B (flavin reductase (NADPH)) [Ho... FBXO44 0.010 F-box protein 44 isoform 2 FBXO44 0.010 F-box protein 44 isoform 1 FBXO44 0.010 F-box protein 44 isoform 2 FBXO44 0.010 F-box protein 44 isoform 1 GDF11 0.010 growth differentiation factor 11 precursor SVIL 0.010 supervillin isoform 2 SVIL 0.010 supervillin isoform 1 HOXA11 0.008 homeobox A11 AIFM2 0.008 apoptosis-inducing factor (AIF)-like mitchondrion-as... PPP1R12C 0.008 protein phosphatase 1, regulatory subunit 12C MORF4L1 0.006 MORF-related gene 15 isoform 2 MORF4L1 0.006 MORF-related gene 15 isoform 1 SYN3 0.006 synapsin III isoform IIIg ALKBH5 0.006 alkB, alkylation repair homolog 5 TCP10L2 0.006 t-complex 10-like 2 LOC100290265 0.006 PREDICTED: hypothetical protein XP_002346787 SMARCA1 0.006 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.006 SWI/SNF-related matrix-associated actin-dependent re... MORF4 0.006 mortality factor 4 FBRS 0.006 fibrosin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.