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Search of human proteins with 148612821
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148612821 tetratricopeptide repeat domain 29 [Homo sapiens]
(475 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148612821 tetratricopeptide repeat domain 29 [Homo sapiens] 955 0.0
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 54 3e-07
gi|164519122 LGN protein [Homo sapiens] 50 4e-06
gi|224548927 G-protein signaling modulator 1 (AGS3-like, C. eleg... 42 0.001
gi|224548925 G-protein signaling modulator 1 (AGS3-like, C. eleg... 42 0.001
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 35 0.15
gi|98961156 tetratricopeptide repeat domain 23 [Homo sapiens] 35 0.15
gi|98961154 tetratricopeptide repeat domain 23 [Homo sapiens] 35 0.15
gi|98961152 tetratricopeptide repeat domain 23 [Homo sapiens] 35 0.15
gi|98961150 tetratricopeptide repeat domain 23 [Homo sapiens] 35 0.15
gi|98961148 tetratricopeptide repeat domain 23 [Homo sapiens] 35 0.15
gi|98961143 tetratricopeptide repeat domain 23 [Homo sapiens] 35 0.15
gi|98961146 tetratricopeptide repeat domain 23 [Homo sapiens] 35 0.15
gi|46358428 selective LIM binding factor homolog [Homo sapiens] 34 0.25
gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo ... 34 0.25
gi|83415184 transmembrane and tetratricopeptide repeat containin... 34 0.25
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 34 0.33
gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens] 34 0.33
gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens] 34 0.33
gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens] 34 0.33
gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens] 34 0.33
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] 34 0.33
gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo ... 34 0.33
gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Hom... 33 0.74
gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens] 33 0.74
gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens] 33 0.74
gi|196259776 peroxisomal biogenesis factor 5 isoform d [Homo sap... 32 1.3
gi|196259774 peroxisomal biogenesis factor 5 isoform d [Homo sap... 32 1.3
gi|196259772 peroxisomal biogenesis factor 5 isoform c [Homo sap... 32 1.3
gi|196259770 peroxisomal biogenesis factor 5 isoform a [Homo sap... 32 1.3
>gi|148612821 tetratricopeptide repeat domain 29 [Homo sapiens]
Length = 475
Score = 955 bits (2468), Expect = 0.0
Identities = 475/475 (100%), Positives = 475/475 (100%)
Query: 1 MTTLPPLPMTRPKLTALARQKLPCSSRKIPRSQLIKEKDDIDHYLEVNFKGLSKEEVAAY 60
MTTLPPLPMTRPKLTALARQKLPCSSRKIPRSQLIKEKDDIDHYLEVNFKGLSKEEVAAY
Sbjct: 1 MTTLPPLPMTRPKLTALARQKLPCSSRKIPRSQLIKEKDDIDHYLEVNFKGLSKEEVAAY 60
Query: 61 RNSYKKNICVDMLRDGYHKSFTELFALMERWDALREAARVRSLFWLQKPLEEQPDKLDYL 120
RNSYKKNICVDMLRDGYHKSFTELFALMERWDALREAARVRSLFWLQKPLEEQPDKLDYL
Sbjct: 61 RNSYKKNICVDMLRDGYHKSFTELFALMERWDALREAARVRSLFWLQKPLEEQPDKLDYL 120
Query: 121 YHYLTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVRNHFYERCFKIAQLIKIDCGKK 180
YHYLTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVRNHFYERCFKIAQLIKIDCGKK
Sbjct: 121 YHYLTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVRNHFYERCFKIAQLIKIDCGKK 180
Query: 181 EAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLL 240
EAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLL
Sbjct: 181 EAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLL 240
Query: 241 SDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTY 300
SDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTY
Sbjct: 241 SDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTY 300
Query: 301 CKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTML 360
CKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTML
Sbjct: 301 CKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTML 360
Query: 361 GDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMMLTVNNYIESAD 420
GDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMMLTVNNYIESAD
Sbjct: 361 GDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMMLTVNNYIESAD 420
Query: 421 LTSLNYLLSWKESRGNIEPDPVTEEFRGSTVEAVSQNSERLEELSRFPGDQKNET 475
LTSLNYLLSWKESRGNIEPDPVTEEFRGSTVEAVSQNSERLEELSRFPGDQKNET
Sbjct: 421 LTSLNYLLSWKESRGNIEPDPVTEEFRGSTVEAVSQNSERLEELSRFPGDQKNET 475
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 53.9 bits (128), Expect = 3e-07
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 162 FYERCFKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDET 221
+YE+ +AQ ++ + +A+A+ +G + G L +A +E + + E
Sbjct: 899 YYEQYLSVAQ--SLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFE------KRLVVAHEL 950
Query: 222 GRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLG 281
G + N + Y L + Y+QAI L + IA++ D+ +E++A+ LG
Sbjct: 951 GEAFNKA------QAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLG 1004
Query: 282 LAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFV 341
+ EY+TAL +I+ + ++ GR Y + +S G A+ Y ++ +
Sbjct: 1005 GVYQQMGEYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHL 1064
Query: 342 KIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYG 401
IA + + LG ++ Y++A Q+ +L DE K+ +G
Sbjct: 1065 SIAAQMNDLAAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRRE--DEAKIRHG 1122
Query: 402 I 402
+
Sbjct: 1123 L 1123
Score = 52.4 bits (124), Expect = 9e-07
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 20/249 (8%)
Query: 163 YERCFKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETG 222
+++C +A+ K + EA +MG +Y G A + +E ++ + K E
Sbjct: 337 HKQCVLLAKQSKDELS--EARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEA 394
Query: 223 RSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGL 282
R+ + L YR DK + Y E+A+E +K +E A Y GL
Sbjct: 395 RAYSNLGSAY---HYRRNFDKAMSYHNY---------VLELAQELMEKAIEMRA--YAGL 440
Query: 283 AHLAA--EEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKF 340
H A ++ E A + I+ DL D + GR + + Q +G+ A+K K
Sbjct: 441 GHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTH 500
Query: 341 VKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHY 400
+ IA+ RA +G+ YN G Y++A + +Q ++E+ + H
Sbjct: 501 LCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDR--ASQASTHG 558
Query: 401 GIAKAHQMM 409
+A A+Q +
Sbjct: 559 NLAVAYQAL 567
Score = 52.4 bits (124), Expect = 9e-07
Identities = 77/335 (22%), Positives = 127/335 (37%), Gaps = 64/335 (19%)
Query: 119 YLYHYLTRAEDAERKESFEDVHNNL-YALACYFNNSEDKWVRNHFYERCFKIAQLIKIDC 177
Y YL A D + E V +NL YA C N E +YE+ +A+ +
Sbjct: 616 YYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAV----KYYEQDLALAK--DLHD 669
Query: 178 GKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTY 237
+A+A+ ++GL ++ +A E + L Q SLN ++ R
Sbjct: 670 KLSQAKAYCNLGLAFKALLNFSKAEECQKYLLSLAQ----------SLN--NSQAKFRAL 717
Query: 238 RLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVL 297
L D + K+ AIK + +A + D+++EA A LG A+ ++Y+ AL
Sbjct: 718 GNLGDIFICKKDINGAIKFYEQQLGLAHQVKDRRLEASAYAALGTAYRMIQKYDKALGYH 777
Query: 298 DTYCKISTDLDDDLSLGRGYEAIAKVLQSQGE---------------------------- 329
++ +L D R + +A V + G+
Sbjct: 778 TQELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVY 837
Query: 330 ------------MTEAIKYLKKFVKIAR---NNFQSLDLVRASTMLGDIYNEKGYYNKAS 374
M EAI Y ++ + + + N LD RA LGD Y G Y +A
Sbjct: 838 GNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAI 897
Query: 375 ECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMM 409
+ ++Q L M D+ K + G+ H+ M
Sbjct: 898 KYYEQYLSVAQSLNRM--QDQAKAYRGLGNGHRAM 930
Score = 52.0 bits (123), Expect = 1e-06
Identities = 66/298 (22%), Positives = 120/298 (40%), Gaps = 63/298 (21%)
Query: 163 YERCFKIAQLIKIDCGKK--EAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDE 220
+E+ KIA+ D G K EA A+ ++G Y +A ++ +L Q + K
Sbjct: 377 HEQHLKIAK----DLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELMEK-- 430
Query: 221 TGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYL 280
++ + A L R + D + ++Q + I A++ D+ E AS L
Sbjct: 431 ---AIEMRAYAGLGHAARCMQDLERAKQYHEQQLGI-------AEDLKDRAAEGRASSNL 480
Query: 281 GLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKF 340
G+ H +Y+TAL + T+ I+ +L D + GR Y + + G +A+KY ++
Sbjct: 481 GIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQE 540
Query: 341 VKIARN----------------NFQSLDL------------------------VRASTML 360
++I+ +Q+L RA + L
Sbjct: 541 LQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNL 600
Query: 361 GDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMMLTVNNYIES 418
G+ + +G Y +A+ ++Q +L M E KV + + AH + NY E+
Sbjct: 601 GNFHCSRGEYVQAAPYYEQYLRLAPDLQDME--GEGKVCHNLGYAHYCL---GNYQEA 653
Score = 51.6 bits (122), Expect = 2e-06
Identities = 77/332 (23%), Positives = 129/332 (38%), Gaps = 29/332 (8%)
Query: 51 GLSKEEVAAYRN-----SYKKNICVDMLRDGYHKSFTELFA-LMERWDALREAARVRSLF 104
G +EE AY N Y++N M YH EL LME+ +R A +
Sbjct: 388 GNKREEARAYSNLGSAYHYRRNFDKAM---SYHNYVLELAQELMEKAIEMRAYAGLGHAA 444
Query: 105 WLQKPLEEQPDKLDYLYHYLTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVRNHFYE 164
+ LE Y L AED + + + +NL + D ++ H
Sbjct: 445 RCMQDLERAKQ---YHEQQLGIAEDLKDRAAEGRASSNL-GIIHQMKGDYDTALKLHKTH 500
Query: 165 RCFKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRS 224
C IAQ ++ + A+ +MG Y G +A +++ Q++ + R+
Sbjct: 501 LC--IAQ--ELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISM-----EVNDRA 551
Query: 225 LNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAH 284
+L Y+ L + Y+ + I A+E D + EA A LG H
Sbjct: 552 SQASTHGNLAVAYQALGAHDRALQHYQNHLNI-------ARELRDIQSEARALSNLGNFH 604
Query: 285 LAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIA 344
+ EY A + Y +++ DL D G+ + G EA+KY ++ + +A
Sbjct: 605 CSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALA 664
Query: 345 RNNFQSLDLVRASTMLGDIYNEKGYYNKASEC 376
++ L +A LG + ++KA EC
Sbjct: 665 KDLHDKLSQAKAYCNLGLAFKALLNFSKAEEC 696
Score = 47.0 bits (110), Expect = 4e-05
Identities = 47/230 (20%), Positives = 100/230 (43%), Gaps = 13/230 (5%)
Query: 181 EAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLL 240
E AH H+ +Y G+ A + YE QL G+ KD SL ++ T +
Sbjct: 793 ECRAHGHLAAVYMALGKYTMAFKCYE--EQLDLGQKLKDP---SLEAQVYGNMGITKMNM 847
Query: 241 SDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASY-YLGLAHLAAEEYETALTVLDT 299
+ ++Q + +L + S G++ ++ +Y LG + A +YE A+ +
Sbjct: 848 NVMEEAIGYFEQQLAMLQQLS-----GNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQ 902
Query: 300 YCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTM 359
Y ++ L+ + Y + ++ G + +A+ +K + +A ++ + +A
Sbjct: 903 YLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGE 962
Query: 360 LGDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMM 409
LG ++++ G Y +A C ++ + ++ L E+ G+ +Q M
Sbjct: 963 LGSLHSQLGNYEQAISCLERQLNIARDMKDRAL--ESDAACGLGGVYQQM 1010
Score = 45.8 bits (107), Expect = 8e-05
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 23/293 (7%)
Query: 133 KESFEDVHNNLYALACYFNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY 192
+ S H NL A+A + D+ +++ Y+ IA+ ++ + EA A ++G +
Sbjct: 550 RASQASTHGNL-AVAYQALGAHDRALQH--YQNHLNIARELRDI--QSEARALSNLGNFH 604
Query: 193 EEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQ 252
G+ ++AA +YE + +L + G+ C +L + L + Y++
Sbjct: 605 CSRGEYVQAAPYYEQYLRLAPDLQDMEGEGK-----VCHNLGYAHYCLGN-------YQE 652
Query: 253 AIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLS 312
A+K + +AK+ DK +A+A LGLA A + A ++ L++ +
Sbjct: 653 AVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALLNFSKAEECQKYLLSLAQSLNNSQA 712
Query: 313 LGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNK 372
R + + + ++ AIK+ ++ + +A A LG Y Y+K
Sbjct: 713 KFRALGNLGDIFICKKDINGAIKFYEQQLGLAHQVKDRRLEASAYAALGTAYRMIQKYDK 772
Query: 373 ASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMM----LTVNNYIESADL 421
A Q + EL +P E + H +A + + + Y E DL
Sbjct: 773 ALGYHTQELEVYQELSDLP--GECRAHGHLAAVYMALGKYTMAFKCYEEQLDL 823
Score = 43.9 bits (102), Expect = 3e-04
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 2/175 (1%)
Query: 235 RTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETAL 294
R + L Y++A+ +A + D++ + A LG + A +Y AL
Sbjct: 275 RAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNAL 334
Query: 295 TVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLV 354
++ D+LS R + V + G+ A++ ++ +KIA++ +
Sbjct: 335 ASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEA 394
Query: 355 RASTMLGDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMM 409
RA + LG Y+ + ++KA + ELM + E + + G+ A + M
Sbjct: 395 RAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELMEKAI--EMRAYAGLGHAARCM 447
Score = 38.1 bits (87), Expect = 0.018
Identities = 28/118 (23%), Positives = 49/118 (41%)
Query: 262 EIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIA 321
++AK D+ E A LG A + Y ALT ++ L D + ++
Sbjct: 262 DVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLG 321
Query: 322 KVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQ 379
V + G+ A+ K+ V +A+ + L R +G +Y G + A +C +Q
Sbjct: 322 HVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQ 379
Score = 32.3 bits (72), Expect = 0.96
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 181 EAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLL 240
+ A+ ++GL YE G A + E L+ D ++++ SL RT+ L
Sbjct: 1036 QGRAYGNLGLTYESLGTFERAVVYQE--QHLSIAAQMNDLAAKTVSY---SSLGRTHHAL 1090
Query: 241 SDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETA------L 294
+ Y QA+ L + +A++ ++ EA+ + LGL+ A+ E A
Sbjct: 1091 QN-------YSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRA 1143
Query: 295 TVLDTYCKISTDLDDDLSLG------RGYEAIAKVLQSQGEMTEAI 334
+ L + L D L Y+A+ +VL S G EA+
Sbjct: 1144 SALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEAL 1189
>gi|164519122 LGN protein [Homo sapiens]
Length = 684
Score = 50.1 bits (118), Expect = 4e-06
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 172 LIKIDCGKKEAE--AHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLA 229
LI + G K AE A+ ++G Y G+ A+E+Y+ L R KD R++ +
Sbjct: 230 LIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKK--TLLLARQLKD---RAVEAQS 284
Query: 230 CESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEE 289
C SL TY LL D Y++AI +K IA+E +D+ E A + LG A+ A
Sbjct: 285 CYSLGNTYTLLQD-------YEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGN 337
Query: 290 YETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKY 336
++ A+ + + +IS ++ D + E A++ S +M + Y
Sbjct: 338 HDQAMHFAEKHLEISREVGD-----KSGELTARLNLSDLQMVLGLSY 379
Score = 45.4 bits (106), Expect = 1e-04
Identities = 26/111 (23%), Positives = 57/111 (51%)
Query: 235 RTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETAL 294
R Y L + + E++ A + K +A++ D+ +EA++ Y LG + ++YE A+
Sbjct: 243 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAI 302
Query: 295 TVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIAR 345
+ I+ +L+D + GR ++ + G +A+ + +K ++I+R
Sbjct: 303 DYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 353
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 263 IAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAK 322
IAKE DK E A LG A++ E+ETA ++ L D + ++
Sbjct: 231 IAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGN 290
Query: 323 VLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKAS-------E 375
+ +AI Y K + IA+ + RA LG+ Y G +++A E
Sbjct: 291 TYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 350
Query: 376 CFQQAFDTTVELMSMPLMDETKVHYGIA-KAHQMMLTVNNYIESADLTSLNYLLSWKESR 434
++ D + EL + + + ++ G++ + +++ N I+S+ L + L + S
Sbjct: 351 ISREVGDKSGELTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSS-LNGVRPKLGRRHSM 409
Query: 435 GNIEPDPVTEE 445
N+E +T E
Sbjct: 410 ENMELMKLTPE 420
Score = 33.5 bits (75), Expect = 0.43
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 30/191 (15%)
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGS 268
H LT R D+ G + A +L T ++L + + +AI + +I++E +
Sbjct: 87 HDLTLARTIGDQLGEAK---ASGNLGNTLKVLGN-------FDEAIVCCQRHLDISRELN 136
Query: 269 DKKMEAEASYYLGLAHLAA----------------EEYETAL-TVLDTY---CKISTDLD 308
DK EA A Y LG + A EE AL +D Y + T L
Sbjct: 137 DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALG 196
Query: 309 DDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKG 368
D + GR + + G +A+ ++ + IA+ RA + LG+ Y G
Sbjct: 197 DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLG 256
Query: 369 YYNKASECFQQ 379
+ ASE +++
Sbjct: 257 EFETASEYYKK 267
Score = 33.1 bits (74), Expect = 0.57
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Query: 239 LLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLD 298
L +++ ++ + + + A ++ E D K + LG A+ +Y AL
Sbjct: 29 LEGERLCKSGDCRAGVSFFEAAVQVGTE--DLKTLSAIYSQLGNAYFYLHDYAKALEYHH 86
Query: 299 TYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRAST 358
++ + D L + + L+ G EAI ++ + I+R + RA
Sbjct: 87 HDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALY 146
Query: 359 MLGDIYNEKG 368
LG++Y+ KG
Sbjct: 147 NLGNVYHAKG 156
Score = 30.0 bits (66), Expect = 4.8
Identities = 24/105 (22%), Positives = 39/105 (37%)
Query: 269 DKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQG 328
D+ + A LG H + A+ + I+ + D + R Y + G
Sbjct: 197 DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLG 256
Query: 329 EMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKA 373
E A +Y KK + +AR ++ LG+ Y Y KA
Sbjct: 257 EFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKA 301
>gi|224548927 G-protein signaling modulator 1 (AGS3-like, C.
elegans) isoform a [Homo sapiens]
Length = 675
Score = 42.4 bits (98), Expect = 0.001
Identities = 26/111 (23%), Positives = 54/111 (48%)
Query: 235 RTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETAL 294
R Y L + + + A + K +++++ D+ +EA+A Y LG + ++YE A
Sbjct: 250 RAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAA 309
Query: 295 TVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIAR 345
+ I+ +L D + GR ++ S G +A+ + KK ++I++
Sbjct: 310 EYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQ 360
Score = 40.0 bits (92), Expect = 0.005
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 40/238 (16%)
Query: 208 FHQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENK---EYKQAIKILIKASE-- 262
+ QL + E GR+L + LL R + D+M E K +K+L + E
Sbjct: 69 YSQLGNAYFYLKEHGRALEYHKHDLLLA--RTIGDRMGEAKASGNLGNTLKVLGRFDEAA 126
Query: 263 --------IAKEGSDKKMEAEASYYLG-------------LAHLAAEEYETALTVLDTYC 301
IA+E DK EA A Y +G A+ + V +T C
Sbjct: 127 VCCQRHLSIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAANATQDPGHLPPDVRETLC 186
Query: 302 KIST----------DLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSL 351
K S +L D + GR Y + G TEA + K+ + IA+
Sbjct: 187 KASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKA 246
Query: 352 DLVRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMM 409
RA + LG+ + G ++ A+E +++ + +L + E + Y + + ++
Sbjct: 247 AERRAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAV--EAQACYSLGNTYTLL 302
Score = 34.7 bits (78), Expect = 0.19
Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 257 LIKASE-------IAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDD 309
L KASE + KE D+ + A LG H + A T I+ + D
Sbjct: 185 LCKASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGD 244
Query: 310 DLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGY 369
+ R Y + G A +Y KK ++++R +A LG+ Y
Sbjct: 245 KAAERRAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQD 304
Query: 370 YNKASE 375
Y +A+E
Sbjct: 305 YERAAE 310
Score = 30.8 bits (68), Expect = 2.8
Identities = 26/106 (24%), Positives = 41/106 (38%)
Query: 263 IAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAK 322
IAKE DK E A LG AH+ ++ A ++S L D + ++
Sbjct: 238 IAKEFGDKAAERRAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGN 297
Query: 323 VLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKG 368
+ A +Y + + IA+ + RA LG+ Y G
Sbjct: 298 TYTLLQDYERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMG 343
>gi|224548925 G-protein signaling modulator 1 (AGS3-like, C.
elegans) isoform b [Homo sapiens]
Length = 457
Score = 42.4 bits (98), Expect = 0.001
Identities = 26/111 (23%), Positives = 54/111 (48%)
Query: 235 RTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETAL 294
R Y L + + + A + K +++++ D+ +EA+A Y LG + ++YE A
Sbjct: 250 RAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAA 309
Query: 295 TVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIAR 345
+ I+ +L D + GR ++ S G +A+ + KK ++I++
Sbjct: 310 EYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQ 360
Score = 40.0 bits (92), Expect = 0.005
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 40/238 (16%)
Query: 208 FHQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENK---EYKQAIKILIKASE-- 262
+ QL + E GR+L + LL R + D+M E K +K+L + E
Sbjct: 69 YSQLGNAYFYLKEHGRALEYHKHDLLLA--RTIGDRMGEAKASGNLGNTLKVLGRFDEAA 126
Query: 263 --------IAKEGSDKKMEAEASYYLG-------------LAHLAAEEYETALTVLDTYC 301
IA+E DK EA A Y +G A+ + V +T C
Sbjct: 127 VCCQRHLSIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAANATQDPGHLPPDVRETLC 186
Query: 302 KIST----------DLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSL 351
K S +L D + GR Y + G TEA + K+ + IA+
Sbjct: 187 KASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKA 246
Query: 352 DLVRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMM 409
RA + LG+ + G ++ A+E +++ + +L + E + Y + + ++
Sbjct: 247 AERRAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAV--EAQACYSLGNTYTLL 302
Score = 34.7 bits (78), Expect = 0.19
Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 257 LIKASE-------IAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDD 309
L KASE + KE D+ + A LG H + A T I+ + D
Sbjct: 185 LCKASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGD 244
Query: 310 DLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGY 369
+ R Y + G A +Y KK ++++R +A LG+ Y
Sbjct: 245 KAAERRAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQD 304
Query: 370 YNKASE 375
Y +A+E
Sbjct: 305 YERAAE 310
Score = 30.8 bits (68), Expect = 2.8
Identities = 26/106 (24%), Positives = 41/106 (38%)
Query: 263 IAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAK 322
IAKE DK E A LG AH+ ++ A ++S L D + ++
Sbjct: 238 IAKEFGDKAAERRAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGN 297
Query: 323 VLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKG 368
+ A +Y + + IA+ + RA LG+ Y G
Sbjct: 298 TYTLLQDYERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMG 343
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 35.0 bits (79), Expect = 0.15
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 39/223 (17%)
Query: 167 FKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLN 226
F I Q+ ++D G E M L+Y E+++ ++ G W
Sbjct: 1104 FTIYQIAEMDKGLSELSP-MQQALIYS-------FCENHDKAIEVLDGISWN-------- 1147
Query: 227 LLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDK-----KMEAEASYYLG 281
+ + LL+ ++ K K+A+++L KA + A SDK + A+ Y LG
Sbjct: 1148 ----RAEMTMCALLAKVQMKAKRTKEAVEVLKKALD-ASSHSDKGPDATTISADCLYNLG 1202
Query: 282 LAHLAAEEYETA--LTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKK 339
L ++ + L + D IS D + ++ K+ + Q +T+ L
Sbjct: 1203 LCYMEEGNLQMTYKLAITDLTTAISMDKNSYIAFYNRALCYTKIRELQMALTDYGIVLL- 1261
Query: 340 FVKIARNNFQSLDLVRASTML--GDIYNEKGYYNKASECFQQA 380
+ + V+ +T L G IY E G Y A E F+QA
Sbjct: 1262 --------LDATETVKLNTFLNRGLIYVELGQYGFALEDFKQA 1296
>gi|98961156 tetratricopeptide repeat domain 23 [Homo sapiens]
Length = 447
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 150 FNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY-EEDGQLLEAAEHYEAF 208
++NS + H RC + ++ D K AEAH+++ Y + G L+A +H E
Sbjct: 55 YSNSHEYKQAVHELVRCVALTRICYGDSHWKLAEAHVNLAQGYLQLKGLSLQAKQHAEKA 114
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKE 266
Q+ I S N + + + + +L +++K+A + L KA ++KE
Sbjct: 115 RQILANSI---VPPYSENTDVFKFSIELFHTMGRALLSLQKFKEAAENLTKAERLSKE 169
>gi|98961154 tetratricopeptide repeat domain 23 [Homo sapiens]
Length = 447
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 150 FNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY-EEDGQLLEAAEHYEAF 208
++NS + H RC + ++ D K AEAH+++ Y + G L+A +H E
Sbjct: 55 YSNSHEYKQAVHELVRCVALTRICYGDSHWKLAEAHVNLAQGYLQLKGLSLQAKQHAEKA 114
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKE 266
Q+ I S N + + + + +L +++K+A + L KA ++KE
Sbjct: 115 RQILANSI---VPPYSENTDVFKFSIELFHTMGRALLSLQKFKEAAENLTKAERLSKE 169
>gi|98961152 tetratricopeptide repeat domain 23 [Homo sapiens]
Length = 447
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 150 FNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY-EEDGQLLEAAEHYEAF 208
++NS + H RC + ++ D K AEAH+++ Y + G L+A +H E
Sbjct: 55 YSNSHEYKQAVHELVRCVALTRICYGDSHWKLAEAHVNLAQGYLQLKGLSLQAKQHAEKA 114
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKE 266
Q+ I S N + + + + +L +++K+A + L KA ++KE
Sbjct: 115 RQILANSI---VPPYSENTDVFKFSIELFHTMGRALLSLQKFKEAAENLTKAERLSKE 169
>gi|98961150 tetratricopeptide repeat domain 23 [Homo sapiens]
Length = 447
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 150 FNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY-EEDGQLLEAAEHYEAF 208
++NS + H RC + ++ D K AEAH+++ Y + G L+A +H E
Sbjct: 55 YSNSHEYKQAVHELVRCVALTRICYGDSHWKLAEAHVNLAQGYLQLKGLSLQAKQHAEKA 114
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKE 266
Q+ I S N + + + + +L +++K+A + L KA ++KE
Sbjct: 115 RQILANSI---VPPYSENTDVFKFSIELFHTMGRALLSLQKFKEAAENLTKAERLSKE 169
>gi|98961148 tetratricopeptide repeat domain 23 [Homo sapiens]
Length = 447
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 150 FNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY-EEDGQLLEAAEHYEAF 208
++NS + H RC + ++ D K AEAH+++ Y + G L+A +H E
Sbjct: 55 YSNSHEYKQAVHELVRCVALTRICYGDSHWKLAEAHVNLAQGYLQLKGLSLQAKQHAEKA 114
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKE 266
Q+ I S N + + + + +L +++K+A + L KA ++KE
Sbjct: 115 RQILANSI---VPPYSENTDVFKFSIELFHTMGRALLSLQKFKEAAENLTKAERLSKE 169
>gi|98961143 tetratricopeptide repeat domain 23 [Homo sapiens]
Length = 447
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 150 FNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY-EEDGQLLEAAEHYEAF 208
++NS + H RC + ++ D K AEAH+++ Y + G L+A +H E
Sbjct: 55 YSNSHEYKQAVHELVRCVALTRICYGDSHWKLAEAHVNLAQGYLQLKGLSLQAKQHAEKA 114
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKE 266
Q+ I S N + + + + +L +++K+A + L KA ++KE
Sbjct: 115 RQILANSI---VPPYSENTDVFKFSIELFHTMGRALLSLQKFKEAAENLTKAERLSKE 169
>gi|98961146 tetratricopeptide repeat domain 23 [Homo sapiens]
Length = 447
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 150 FNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLY-EEDGQLLEAAEHYEAF 208
++NS + H RC + ++ D K AEAH+++ Y + G L+A +H E
Sbjct: 55 YSNSHEYKQAVHELVRCVALTRICYGDSHWKLAEAHVNLAQGYLQLKGLSLQAKQHAEKA 114
Query: 209 HQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKE 266
Q+ I S N + + + + +L +++K+A + L KA ++KE
Sbjct: 115 RQILANSI---VPPYSENTDVFKFSIELFHTMGRALLSLQKFKEAAENLTKAERLSKE 169
>gi|46358428 selective LIM binding factor homolog [Homo sapiens]
Length = 1749
Score = 34.3 bits (77), Expect = 0.25
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 30/218 (13%)
Query: 13 KLTALARQKLPCSSRKIPRS---QLIKEKD---DIDHYLEVNFKGLSKEEVAAYRNSYKK 66
K LAR P K+ + L+++K I+HY+E + E A +KK
Sbjct: 840 KAVELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEARCS-IKAIEAALGARQWKK 898
Query: 67 NICVDMLRDG-----YHKSFTELFALMERWDALRE----AARVRSLF--WLQKPLEEQPD 115
I + L+D Y+ + +A ++ ++ E R + + Q EQ
Sbjct: 899 AIYILDLQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAH 958
Query: 116 KL--------DYLYHYLTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVRNHFYERCF 167
KL D Y+T+A++ E++ + + LY + + + ++ Y+
Sbjct: 959 KLAMKCMRPEDVSVLYITQAQEMEKQGKYREAER-LYVTVQEPDLAITMYKKHKLYDDMI 1017
Query: 168 KIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHY 205
++ D ++ H+H+G E +G+L EA HY
Sbjct: 1018 RLVGKHHPDL---LSDTHLHLGKELEAEGRLQEAEYHY 1052
>gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo
sapiens]
Length = 807
Score = 34.3 bits (77), Expect = 0.25
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 231 ESLLRTYRLLSDKMLEN--KEYKQAIKILIKASEIAKEGSD--KKMEAEASYYL----GL 282
E L Y L+ + + + + ++IL I + +D K ++ + S L G
Sbjct: 145 EELAIAYVLIGSGLYDEAIRHFSTMLQILSPLGRINEAVNDLTKAIQLQPSARLYRHRGT 204
Query: 283 AHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVK 342
+ +E+Y TA S +L+ + + Y+ + +G + EAI+ K+ +K
Sbjct: 205 LYFISEDYATAHEDFQQ----SLELNKNQPIAMLYKGLT--FFHRGLLKEAIESFKEALK 258
Query: 343 IARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
Q +D + A LG Y E G + A+E FQ+A
Sbjct: 259 ------QKVDFIDAYKSLGQAYRELGNFEAATESFQKA 290
>gi|83415184 transmembrane and tetratricopeptide repeat containing 1
[Homo sapiens]
Length = 774
Score = 34.3 bits (77), Expect = 0.25
Identities = 69/344 (20%), Positives = 128/344 (37%), Gaps = 58/344 (16%)
Query: 43 HYLEVNF---KGLSKEEVAAYRNSYKKNICVDMLRDGYHKSFTELFALMERWDALREAAR 99
HY NF +G +KE + YR + K L + + L L R+ A
Sbjct: 378 HYNYANFLKDQGRNKEAIYHYRTALK-------LYPRHASALNNLGTLT------RDTAE 424
Query: 100 VRSLFWLQKPLEEQPDKLDYLYHYLTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVR 159
+ + Q+ L+ P L++ + E+KE + + F ++
Sbjct: 425 AKMYY--QRALQLHPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLAS 482
Query: 160 NHFYERCFKIAQLIK---IDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRI 216
+ FK A+ I I ++ H + G+ + G +A HY+ +L+
Sbjct: 483 LLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPS-- 540
Query: 217 WKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEA 276
+ +A +L R YR L + + + YK+A+++ KA ++
Sbjct: 541 ---------HHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAEILSP----------- 580
Query: 277 SYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKY 336
LG + YE AL + + +L L A+A+VL G+ EA K
Sbjct: 581 ---LGALYYNTGRYEEALQIYQEAAALQPS-QRELRL-----ALAQVLAVMGQTKEAEKM 631
Query: 337 LKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
V + + +L IY+++ ++KA + +A
Sbjct: 632 TNHIVS------EETGCLECYRLLSAIYSKQENHDKALDAIDKA 669
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 33.9 bits (76), Expect = 0.33
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 39/223 (17%)
Query: 167 FKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLN 226
F I Q+ ++D G E M L+Y E+++ ++ G W
Sbjct: 1104 FTIYQIAEMDKGLSELSP-MQQALIYS-------FCENHDKAIEVLDGISWN-------- 1147
Query: 227 LLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDK-----KMEAEASYYLG 281
+ + LL+ ++ K K+A+++L KA + A SDK + A+ Y LG
Sbjct: 1148 ----RAEMTMCALLAKVQMKAKRTKEAVEVLKKALD-AISHSDKGPDATAISADCLYNLG 1202
Query: 282 LAHLAAEEYETA--LTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKK 339
L ++ + L + D IS D + ++ K+ + Q +T+ L
Sbjct: 1203 LCYMEEGNLQMTYKLAITDLTTAISMDKNSYIAFYNRALCYTKIRELQMALTDYGIVLL- 1261
Query: 340 FVKIARNNFQSLDLVRASTML--GDIYNEKGYYNKASECFQQA 380
+ + V+ +T L G IY E G Y A E F+QA
Sbjct: 1262 --------LDATETVKLNTFLNRGLIYVELGQYGFALEDFKQA 1296
>gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 33.9 bits (76), Expect = 0.33
Identities = 61/252 (24%), Positives = 92/252 (36%), Gaps = 33/252 (13%)
Query: 174 KIDCGKKEAEAHMHMG----LLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLA 229
K + G E E M M LL E + + AE+ + +G I K+ L LA
Sbjct: 16 KKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKE-----LFKLA 70
Query: 230 CESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKME--------------AE 275
+L TY L ++M NK++ + KE K ME
Sbjct: 71 TTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKA 130
Query: 276 ASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMT---- 331
A Y+ H + E L V Y + DL L + + K L S GE T
Sbjct: 131 AQKYVERIHYIGQN-EPELLVAHAYTRYMGDLSGGQVLKKVAQRALK-LPSTGEGTQFYL 188
Query: 332 -EAIKYLKKFVKIARNNFQSLDL-VRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMS 389
E + ++F ++ R +LDL ++ + + N+ YN + F + L
Sbjct: 189 FENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYN--MQIFNELDQAGSTLAR 246
Query: 390 MPLMDETKVHYG 401
L D VH G
Sbjct: 247 ETLEDGFPVHDG 258
>gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 33.9 bits (76), Expect = 0.33
Identities = 61/252 (24%), Positives = 92/252 (36%), Gaps = 33/252 (13%)
Query: 174 KIDCGKKEAEAHMHMG----LLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLA 229
K + G E E M M LL E + + AE+ + +G I K+ L LA
Sbjct: 16 KKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKE-----LFKLA 70
Query: 230 CESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKME--------------AE 275
+L TY L ++M NK++ + KE K ME
Sbjct: 71 TTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKA 130
Query: 276 ASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMT---- 331
A Y+ H + E L V Y + DL L + + K L S GE T
Sbjct: 131 AQKYVERIHYIGQN-EPELLVAHAYTRYMGDLSGGQVLKKVAQRALK-LPSTGEGTQFYL 188
Query: 332 -EAIKYLKKFVKIARNNFQSLDL-VRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMS 389
E + ++F ++ R +LDL ++ + + N+ YN + F + L
Sbjct: 189 FENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYN--MQIFNELDQAGSTLAR 246
Query: 390 MPLMDETKVHYG 401
L D VH G
Sbjct: 247 ETLEDGFPVHDG 258
>gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 33.9 bits (76), Expect = 0.33
Identities = 61/252 (24%), Positives = 92/252 (36%), Gaps = 33/252 (13%)
Query: 174 KIDCGKKEAEAHMHMG----LLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLA 229
K + G E E M M LL E + + AE+ + +G I K+ L LA
Sbjct: 16 KKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKE-----LFKLA 70
Query: 230 CESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKME--------------AE 275
+L TY L ++M NK++ + KE K ME
Sbjct: 71 TTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKA 130
Query: 276 ASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMT---- 331
A Y+ H + E L V Y + DL L + + K L S GE T
Sbjct: 131 AQKYVERIHYIGQN-EPELLVAHAYTRYMGDLSGGQVLKKVAQRALK-LPSTGEGTQFYL 188
Query: 332 -EAIKYLKKFVKIARNNFQSLDL-VRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMS 389
E + ++F ++ R +LDL ++ + + N+ YN + F + L
Sbjct: 189 FENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYN--MQIFNELDQAGSTLAR 246
Query: 390 MPLMDETKVHYG 401
L D VH G
Sbjct: 247 ETLEDGFPVHDG 258
>gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 33.9 bits (76), Expect = 0.33
Identities = 61/252 (24%), Positives = 92/252 (36%), Gaps = 33/252 (13%)
Query: 174 KIDCGKKEAEAHMHMG----LLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLA 229
K + G E E M M LL E + + AE+ + +G I K+ L LA
Sbjct: 16 KKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKE-----LFKLA 70
Query: 230 CESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKME--------------AE 275
+L TY L ++M NK++ + KE K ME
Sbjct: 71 TTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKA 130
Query: 276 ASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMT---- 331
A Y+ H + E L V Y + DL L + + K L S GE T
Sbjct: 131 AQKYVERIHYIGQN-EPELLVAHAYTRYMGDLSGGQVLKKVAQRALK-LPSTGEGTQFYL 188
Query: 332 -EAIKYLKKFVKIARNNFQSLDL-VRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMS 389
E + ++F ++ R +LDL ++ + + N+ YN + F + L
Sbjct: 189 FENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYN--MQIFNELDQAGSTLAR 246
Query: 390 MPLMDETKVHYG 401
L D VH G
Sbjct: 247 ETLEDGFPVHDG 258
>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
Length = 1378
Score = 33.9 bits (76), Expect = 0.33
Identities = 47/202 (23%), Positives = 78/202 (38%), Gaps = 46/202 (22%)
Query: 276 ASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIK 335
A Y LG H A ++ A+ L+ + + + IA+VLQ G+ A +
Sbjct: 204 ARYNLGTIHWRAGQHSQAMRCLEGARECAHTMRKRFMESECCVVIAQVLQDLGDFLAAKR 263
Query: 336 YLKKFVK-----------IARNNFQSLDLVRAS------------------TMLGDIYNE 366
LKK + I +N L +VR LGD++++
Sbjct: 264 ALKKAYRLGSQKPVQRAAICQNLQHVLAVVRLQQQLEEAEGRDPQGAMVICEQLGDLFSK 323
Query: 367 KGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIA------KAH---------QMMLT 411
G + +A+E +Q+ EL+ P + +H +A K H ++ L
Sbjct: 324 AGDFPRAAEAYQKQL-RFAELLDRPGAERAIIHVSLATTLGDMKDHHGAVRHYEEELRLR 382
Query: 412 VNNYIESADLTSLNYLLSWKES 433
N +E A T LN LS +E+
Sbjct: 383 SGNVLEEAK-TWLNIALSREEA 403
>gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo
sapiens]
Length = 860
Score = 33.9 bits (76), Expect = 0.33
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 292 TALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQS-----QGEMTEAIKYLKKFVKIARN 346
T + + Y D L L + + IA + + +G + EAI+ K+ +K
Sbjct: 257 TLYFISEDYATAHEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALK---- 311
Query: 347 NFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
Q +D + A LG Y E G + A+E FQ+A
Sbjct: 312 --QKVDFIDAYKSLGQAYRELGNFEAATESFQKA 343
>gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Homo
sapiens]
Length = 1614
Score = 32.7 bits (73), Expect = 0.74
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 167 FKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLN 226
F I Q+ ++D G E M L+Y E+++ ++ G W
Sbjct: 1104 FTIYQIAEMDKGLSELSP-MQQALIYS-------FCENHDKAIEVLDGISWN-------- 1147
Query: 227 LLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDK-----KMEAEASYYLG 281
+ + LL+ ++ K K+A+++L KA + A SDK + A+ Y LG
Sbjct: 1148 ----RAEMTMCALLAKVQMKAKRTKEAVEVLKKALD-AISHSDKGPDATAISADCLYNLG 1202
Query: 282 LAHLAAEEYETA--LTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKK 339
L ++ + L + D IS D + + K+ + Q +T+ L
Sbjct: 1203 LCYMEEGNLQMTYKLAITDLTTAISMDKNSYTAFYNRALCYTKIRELQMALTDYGIVLL- 1261
Query: 340 FVKIARNNFQSLDLVRASTML--GDIYNEKGYYNKASECFQQA 380
+ + V+ +T L G IY E G Y A E F+QA
Sbjct: 1262 --------LDATETVKLNTFLNRGLIYVELGQYGFALEDFKQA 1296
>gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens]
Length = 1036
Score = 32.7 bits (73), Expect = 0.74
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 182 AEAHMHMGLLYEEDGQLLEAAEHY 205
AEA+ ++G +Y+E GQL EA EHY
Sbjct: 79 AEAYSNLGNVYKERGQLQEAIEHY 102
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 46/235 (19%)
Query: 168 KIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNL 227
K L I+ A A ++G ++ G++ A H+E L
Sbjct: 167 KACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP-------------- 212
Query: 228 LACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYY-LGLAHLA 286
+ L Y L + + E + + +A+ ++A ++ + YY GL LA
Sbjct: 213 ----NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLA 268
Query: 287 AEEYETALTVL----DTYCKISTDLDDDLSLGRGYEA-----------------IAKVLQ 325
+ Y A+ + D YC ++ L + S+ + +A + +
Sbjct: 269 IDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKR 328
Query: 326 SQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
QG + EA++ +K +++ + A + L + ++G +A +++A
Sbjct: 329 EQGNIEEAVRLYRKALEVFP------EFAAAHSNLASVLQQQGKLQEALMHYKEA 377
>gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens]
Length = 1046
Score = 32.7 bits (73), Expect = 0.74
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 182 AEAHMHMGLLYEEDGQLLEAAEHY 205
AEA+ ++G +Y+E GQL EA EHY
Sbjct: 89 AEAYSNLGNVYKERGQLQEAIEHY 112
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 46/235 (19%)
Query: 168 KIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNL 227
K L I+ A A ++G ++ G++ A H+E L
Sbjct: 177 KACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP-------------- 222
Query: 228 LACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYY-LGLAHLA 286
+ L Y L + + E + + +A+ ++A ++ + YY GL LA
Sbjct: 223 ----NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLA 278
Query: 287 AEEYETALTVL----DTYCKISTDLDDDLSLGRGYEA-----------------IAKVLQ 325
+ Y A+ + D YC ++ L + S+ + +A + +
Sbjct: 279 IDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKR 338
Query: 326 SQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
QG + EA++ +K +++ + A + L + ++G +A +++A
Sbjct: 339 EQGNIEEAVRLYRKALEVFP------EFAAAHSNLASVLQQQGKLQEALMHYKEA 387
>gi|196259776 peroxisomal biogenesis factor 5 isoform d [Homo
sapiens]
Length = 639
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/220 (20%), Positives = 83/220 (37%), Gaps = 17/220 (7%)
Query: 176 DCGKKEAEAHMHM-------------GLLYEEDGQLLEAAEHYE-AFHQLTQGRIWKDET 221
+ K++AEAH + G +EE+ L + + +E +L +G +
Sbjct: 297 EMAKRDAEAHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVL 356
Query: 222 GRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYL- 280
+ + ++ L EN++ AI L + E+ + M S+
Sbjct: 357 LFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 416
Query: 281 GLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKF 340
L A E L Y + T ++ G G ++L S + ++ + F
Sbjct: 417 SLQRQACETLRDWLRYTPAYAHLVTPAEEGAG-GAGLGPSKRILGSLLSDSLFLEVKELF 475
Query: 341 VKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
+ R + S+D LG ++N G Y+KA +CF A
Sbjct: 476 LAAVRLDPTSID-PDVQCGLGVLFNLSGEYDKAVDCFTAA 514
>gi|196259774 peroxisomal biogenesis factor 5 isoform d [Homo
sapiens]
Length = 639
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/220 (20%), Positives = 83/220 (37%), Gaps = 17/220 (7%)
Query: 176 DCGKKEAEAHMHM-------------GLLYEEDGQLLEAAEHYE-AFHQLTQGRIWKDET 221
+ K++AEAH + G +EE+ L + + +E +L +G +
Sbjct: 297 EMAKRDAEAHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVL 356
Query: 222 GRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYL- 280
+ + ++ L EN++ AI L + E+ + M S+
Sbjct: 357 LFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 416
Query: 281 GLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKF 340
L A E L Y + T ++ G G ++L S + ++ + F
Sbjct: 417 SLQRQACETLRDWLRYTPAYAHLVTPAEEGAG-GAGLGPSKRILGSLLSDSLFLEVKELF 475
Query: 341 VKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
+ R + S+D LG ++N G Y+KA +CF A
Sbjct: 476 LAAVRLDPTSID-PDVQCGLGVLFNLSGEYDKAVDCFTAA 514
>gi|196259772 peroxisomal biogenesis factor 5 isoform c [Homo
sapiens]
Length = 602
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/220 (20%), Positives = 83/220 (37%), Gaps = 17/220 (7%)
Query: 176 DCGKKEAEAHMHM-------------GLLYEEDGQLLEAAEHYE-AFHQLTQGRIWKDET 221
+ K++AEAH + G +EE+ L + + +E +L +G +
Sbjct: 260 EMAKRDAEAHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVL 319
Query: 222 GRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYL- 280
+ + ++ L EN++ AI L + E+ + M S+
Sbjct: 320 LFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 379
Query: 281 GLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKF 340
L A E L Y + T ++ G G ++L S + ++ + F
Sbjct: 380 SLQRQACETLRDWLRYTPAYAHLVTPAEEGAG-GAGLGPSKRILGSLLSDSLFLEVKELF 438
Query: 341 VKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
+ R + S+D LG ++N G Y+KA +CF A
Sbjct: 439 LAAVRLDPTSID-PDVQCGLGVLFNLSGEYDKAVDCFTAA 477
>gi|196259770 peroxisomal biogenesis factor 5 isoform a [Homo
sapiens]
Length = 654
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/220 (20%), Positives = 83/220 (37%), Gaps = 17/220 (7%)
Query: 176 DCGKKEAEAHMHM-------------GLLYEEDGQLLEAAEHYE-AFHQLTQGRIWKDET 221
+ K++AEAH + G +EE+ L + + +E +L +G +
Sbjct: 312 EMAKRDAEAHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVL 371
Query: 222 GRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYL- 280
+ + ++ L EN++ AI L + E+ + M S+
Sbjct: 372 LFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 431
Query: 281 GLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKF 340
L A E L Y + T ++ G G ++L S + ++ + F
Sbjct: 432 SLQRQACETLRDWLRYTPAYAHLVTPAEEGAG-GAGLGPSKRILGSLLSDSLFLEVKELF 490
Query: 341 VKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQA 380
+ R + S+D LG ++N G Y+KA +CF A
Sbjct: 491 LAAVRLDPTSID-PDVQCGLGVLFNLSGEYDKAVDCFTAA 529
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,731,296
Number of Sequences: 37866
Number of extensions: 689129
Number of successful extensions: 2118
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 2040
Number of HSP's gapped (non-prelim): 122
length of query: 475
length of database: 18,247,518
effective HSP length: 106
effective length of query: 369
effective length of database: 14,233,722
effective search space: 5252243418
effective search space used: 5252243418
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.