Guide to the Human Genome
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Name: HMOX2 Sequence: fasta or formatted (316aa) NCBI GI: 8051608
Description:

heme oxygenase (decyclizing) 2

Referenced in:

Heme

Other entries for this name:
alt mRNA [316aa] heme oxygenase (decyclizing) 2
alt mRNA [316aa] heme oxygenase (decyclizing) 2
alt mRNA [316aa] heme oxygenase (decyclizing) 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         35           2
 C cysteine            0.9          3           1
 D aspartate           4.4         14           1
 E glutamate          11.4         36           3
 F phenylalanine       5.4         17           2
 G glycine             6.0         19           2
 H histidine           1.9          6           1
 I isoleucine          1.9          6           1
 K lysine              8.2         26           2
 L leucine            10.1         32           2
 M methionine          4.1         13           1
 N asparagine          4.4         14           1
 P proline             3.2         10           1
 Q glutamine           5.1         16           2
 R arginine            4.4         14           1
 S serine              3.8         12           2
 T threonine           4.4         14           2
 V valine              4.1         13           1
 W tryptophan          0.6          2           1
 Y tyrosine            4.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heme oxygenase (decyclizing) 2 
HMOX2                 1.000   heme oxygenase (decyclizing) 2 
HMOX2                 1.000   heme oxygenase (decyclizing) 2 
HMOX2                 1.000   heme oxygenase (decyclizing) 2 
HMOX1                 0.378   heme oxygenase (decyclizing) 1 
TTC29                 0.015   tetratricopeptide repeat domain 29 
DST                   0.013   dystonin isoform 4 
DST                   0.013   dystonin isoform 3 
DST                   0.013   dystonin isoform 2 
DST                   0.013   dystonin isoform 1 
DST                   0.013   dystonin isoform 1eA precursor 
PMFBP1                0.011   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.011   polyamine modulated factor 1 binding protein 1 isof...
CCDC66                0.011   coiled-coil domain containing 66 isoform 1 
CCDC66                0.011   coiled-coil domain containing 66 isoform 2 
LARP1                 0.010   la related protein isoform 2 
LARP1                 0.010   la related protein isoform 1 
HYDIN                 0.008   hydrocephalus inducing isoform a 
NUPL2                 0.008   nucleoporin like 2 
KDM5A                 0.007   retinoblastoma binding protein 2 isoform 1 
KDM5A                 0.007   retinoblastoma binding protein 2 isoform 2 
CCDC91                0.007   GGA binding partner 
CLSPN                 0.005   claspin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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