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Search of human proteins with 148491057
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148491057 crystallin, gamma A [Homo sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148491057 crystallin, gamma A [Homo sapiens] 385 e-107
gi|148491074 crystallin, gamma B [Homo sapiens] 291 2e-79
gi|10518338 crystallin, gamma C [Homo sapiens] 290 3e-79
gi|13377002 crystallin, gamma D [Homo sapiens] 278 2e-75
gi|8922120 crystallin, gamma S [Homo sapiens] 203 7e-53
gi|4758074 crystallin, beta B3 [Homo sapiens] 112 2e-25
gi|4503063 crystallin, beta B2 [Homo sapiens] 110 6e-25
gi|89886227 absent in melanoma 1-like [Homo sapiens] 110 8e-25
gi|4503061 crystallin, beta B1 [Homo sapiens] 108 2e-24
gi|12056461 crystallin, beta A3 [Homo sapiens] 105 2e-23
gi|16936542 crystallin, beta A2 [Homo sapiens] 103 8e-23
gi|16936540 crystallin, beta A2 [Homo sapiens] 103 8e-23
gi|7019357 crystallin, beta A2 [Homo sapiens] 103 8e-23
gi|4503059 crystallin, beta A4 [Homo sapiens] 102 2e-22
gi|62988361 absent in melanoma 1 [Homo sapiens] 97 5e-21
gi|21389517 gammaN-crystallin [Homo sapiens] 83 1e-16
gi|90403579 beta-gamma crystallin domain containing 3 [Homo sapi... 82 2e-16
gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... 29 2.3
gi|197927446 sarcosine dehydrogenase precursor [Homo sapiens] 27 6.8
gi|21361378 sarcosine dehydrogenase precursor [Homo sapiens] 27 6.8
gi|7706113 protocadherin 12 precursor [Homo sapiens] 27 6.8
gi|239755460 PREDICTED: similar to mucin, partial [Homo sapiens] 27 8.9
>gi|148491057 crystallin, gamma A [Homo sapiens]
Length = 174
Score = 385 bits (989), Expect = e-107
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR
Sbjct: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
Query: 61 GKYPDYQHWMGLSDSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE 120
GKYPDYQHWMGLSDSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE
Sbjct: 61 GKYPDYQHWMGLSDSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE 120
Query: 121 IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDLY 174
IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDLY
Sbjct: 121 IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDLY 174
>gi|148491074 crystallin, gamma B [Homo sapiens]
Length = 175
Score = 291 bits (745), Expect = 2e-79
Identities = 129/175 (73%), Positives = 153/175 (87%), Gaps = 1/175 (0%)
Query: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
MGKITFYEDR FQGR Y C +DCPNL+ YFSRCNSIRV+SGCWM+YERPNYQGHQYFLRR
Sbjct: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
Query: 61 GKYPDYQHWMGLSDSVQSCRII-PHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLP 119
G+YPDYQ WMGLSDS++SC +I PH+ ++++++Y+RD+ RG MSELTDDC V + F L
Sbjct: 61 GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
Query: 120 EIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDLY 174
EI+SL+VLEG W+LYEMPNYRGRQYLLRPG+YRR+ DWG +AKVGSLRRV DLY
Sbjct: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLY 175
>gi|10518338 crystallin, gamma C [Homo sapiens]
Length = 174
Score = 290 bits (743), Expect = 3e-79
Identities = 130/174 (74%), Positives = 147/174 (84%)
Query: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
MGKITFYEDR FQGR Y +DCPNL+ YFSRCNSIRV+SGCWMLYERPNYQG QY LRR
Sbjct: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
Query: 61 GKYPDYQHWMGLSDSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE 120
G+YPDYQ WMGLSDS++SC +IP T SH+LRLYER+D++GLM EL++DC + + F L E
Sbjct: 61 GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE 120
Query: 121 IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDLY 174
I SLHVLEGCWVLYE+PNYRGRQYLLRP +YRR DWG DAK GSLRRV DLY
Sbjct: 121 IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY 174
>gi|13377002 crystallin, gamma D [Homo sapiens]
Length = 174
Score = 278 bits (711), Expect = 2e-75
Identities = 125/172 (72%), Positives = 143/172 (83%)
Query: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
MGKIT YEDR FQGR Y C SD PNL+ Y SRCNS RVDSGCWMLYE+PNY G QYFLRR
Sbjct: 1 MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
Query: 61 GKYPDYQHWMGLSDSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE 120
G Y D+Q WMGLSDSV+SCR+IPH+ SH++RLYER+DYRG M E T+DC+C+ + FR E
Sbjct: 61 GDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE 120
Query: 121 IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTD 172
I+SL+VLEG WVLYE+ NYRGRQYLL PGDYRRY DWG +A+VGSLRRV D
Sbjct: 121 IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
>gi|8922120 crystallin, gamma S [Homo sapiens]
Length = 178
Score = 203 bits (516), Expect = 7e-53
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 2/172 (1%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRGK 62
KITFYED++FQGR Y+C DC + Y SRCNSI+V+ G W +YERPN+ G+ Y L +G+
Sbjct: 7 KITFYEDKNFQGRRYDCDCDCADFHTYLSRCNSIKVEGGTWAVYERPNFAGYMYILPQGE 66
Query: 63 YPDYQHWMGLSDSVQSCRII--PHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE 120
YP+YQ WMGL+D + SCR + P +K++++E+ D+ G M E T+DC + E F + E
Sbjct: 67 YPEYQRWMGLNDRLSSCRAVHLPSGGQYKIQIFEKGDFSGQMYETTEDCPSIMEQFHMRE 126
Query: 121 IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTD 172
I+S VLEG W+ YE+PNYRGRQYLL +YR+ DWG A V S RR+ +
Sbjct: 127 IHSCKVLEGVWIFYELPNYRGRQYLLDKKEYRKPIDWGAASPAVQSFRRIVE 178
>gi|4758074 crystallin, beta B3 [Homo sapiens]
Length = 211
Score = 112 bits (280), Expect = 2e-25
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 15/180 (8%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLR-VYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
K+ YE +FQG+ ++CP+L + SI+V+SG W+ +E ++G Q+ L +G
Sbjct: 25 KVILYELENFQGKRCELSAECPSLTDSLLEKVGSIQVESGPWLAFESRAFRGEQFVLEKG 84
Query: 62 KYPDYQHWMGL--SDSVQSCRII----PHTSSHKLRLYERDDYRGLMSELTDDCACVPEL 115
YP + W SDS+ S R + PH HKL L+E + G E+ DD VP L
Sbjct: 85 DYPRWDAWSNSRDSDSLLSLRPLNIDSPH---HKLHLFENPAFSGRKMEIVDDD--VPSL 139
Query: 116 FR---LPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTD 172
+ + S+ + G WV YE P YRGRQY+ G+YR +++W + ++ S+RR+ D
Sbjct: 140 WAHGFQDRVASVRAINGTWVGYEFPGYRGRQYVFERGEYRHWNEWDASQPQLQSVRRIRD 199
Score = 52.4 bits (124), Expect = 2e-07
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 87 SHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL 146
S+K+ LYE ++++G EL+ +C + + L ++ S+ V G W+ +E +RG Q++L
Sbjct: 23 SYKVILYELENFQGKRCELSAECPSLTDSL-LEKVGSIQVESGPWLAFESRAFRGEQFVL 81
Query: 147 RPGDYRRYHDWGGA 160
GDY R+ W +
Sbjct: 82 EKGDYPRWDAWSNS 95
Score = 52.4 bits (124), Expect = 2e-07
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 3 KITFYEDRDFQGRCYNCISD-CPNLRV--YFSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
K+ +E+ F GR + D P+L + R S+R +G W+ YE P Y+G QY
Sbjct: 115 KLHLFENPAFSGRKMEIVDDDVPSLWAHGFQDRVASVRAINGTWVGYEFPGYRGRQYVFE 174
Query: 60 RGKYPDYQHWMGLSDSVQSCRIIPHTSSHK 89
RG+Y + W +QS R I HK
Sbjct: 175 RGEYRHWNEWDASQPQLQSVRRIRDQKWHK 204
>gi|4503063 crystallin, beta B2 [Homo sapiens]
Length = 205
Score = 110 bits (275), Expect = 6e-25
Identities = 64/178 (35%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLR-VYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
KI +E +FQG + CPNL+ + S+ V +G W+ YE+ N +G Q+ +G
Sbjct: 18 KIIIFEQENFQGHSHELNGPCPNLKETGVEKAGSVLVQAGPWVGYEQANCKGEQFVFEKG 77
Query: 62 KYPDYQHWMGL--SDSVQSCRIIPHTSS-HKLRLYERDDYRGLMSELTDDCACVPELFR- 117
+YP + W +DS+ S R I S HK+ LYE ++ G E+ DD VP
Sbjct: 78 EYPRWDSWTSSRRTDSLSSLRPIKVDSQEHKIILYENPNFTGKKMEIIDDD--VPSFHAH 135
Query: 118 --LPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDL 173
++ S+ V G WV Y+ P YRG QYLL GDY+ D+G +V S+RR+ D+
Sbjct: 136 GYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDSSDFGAPHPQVQSVRRIRDM 193
Score = 54.3 bits (129), Expect = 5e-08
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 3 KITFYEDRDFQGRCYNCISD-CPNLRV--YFSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
KI YE+ +F G+ I D P+ Y + +S+RV SG W+ Y+ P Y+G QY L
Sbjct: 108 KIILYENPNFTGKKMEIIDDDVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLE 167
Query: 60 RGKYPDYQHWMGLSDSVQSCRIIPHTSSHK 89
+G Y D + VQS R I H+
Sbjct: 168 KGDYKDSSDFGAPHPQVQSVRRIRDMQWHQ 197
>gi|89886227 absent in melanoma 1-like [Homo sapiens]
Length = 616
Score = 110 bits (274), Expect = 8e-25
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 7 YEDRDFQGRCYNCISDCPNLRV-------YFSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
YE FQGR + D NL+ + + S+RV GCW+ YE+ ++GHQY L
Sbjct: 128 YEAPGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQYLLE 187
Query: 60 RGKYPDYQHWMGLSDSVQSCRII-PHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRL 118
G+YPD+ HW G + + S R+I + L+E D+ G E++ V +
Sbjct: 188 EGEYPDWSHWGGYDELLTSLRVIRTDFGDPAVVLFEAMDFEGHGVEVSKALPDVELVQHG 247
Query: 119 PEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRV 170
P ++HVL G WV Y+ + G QY+L G YR DWG ++ + SL+ V
Sbjct: 248 PSTQAIHVLSGVWVAYQEVGFSGEQYVLEKGVYRNCEDWGAGNSTLASLQPV 299
Score = 81.6 bits (200), Expect = 3e-16
Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 35 SIRVDSGCWMLYERPNYQGHQYFLRRGKYPDYQHWMGLSDSVQS-------CRIIPHTSS 87
S V +G W+LY +P ++ Y L G+YP + W SV S C +
Sbjct: 63 SATVSAGLWLLYPKPLFEDTPYILEPGEYPTSEAWGTSDPSVGSLKPMRLGCPSVEKPGE 122
Query: 88 HKLRLYERDDYRGLMSELTDDCACV--PELFRLP---EIYSLHVLEGCWVLYEMPNYRGR 142
+ +YE ++G E++ D + PE + P + SL VL GCWV YE +RG
Sbjct: 123 PRAVVYEAPGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGH 182
Query: 143 QYLLRPGDYRRYHDWGGADAKVGSLR 168
QYLL G+Y + WGG D + SLR
Sbjct: 183 QYLLEEGEYPDWSHWGGYDELLTSLR 208
Score = 74.3 bits (181), Expect = 5e-14
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 4 ITFYEDRDFQGRCYNCISDCPNLRV--YFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
+ +E DF+G P++ + + +I V SG W+ Y+ + G QY L +G
Sbjct: 219 VVLFEAMDFEGHGVEVSKALPDVELVQHGPSTQAIHVLSGVWVAYQEVGFSGEQYVLEKG 278
Query: 62 KYPDYQHWMGLSDSVQSCRIIPHTSSH------KLRLYERDDYRGLMSELTDDCACVPEL 115
Y + + W + ++ S + + H K++L+ R D+ G DD A +P
Sbjct: 279 VYRNCEDWGAGNSTLASLQPVLQVGEHDLHFVSKIQLFSRPDFLGDHFSFEDDQAALPAS 338
Query: 116 FRLPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGG-ADAKVGSLRRVT 171
FR P+ S V G W+L++ N+ G Q++L G++ G A +GSL++V+
Sbjct: 339 FR-PQ--SCRVHGGSWILFDETNFEGDQHILSEGEFPTLTAMGCLASTVLGSLQKVS 392
Score = 63.5 bits (153), Expect = 9e-11
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
+ KI + DF G ++ D L F R S RV G W+L++ N++G Q+ L
Sbjct: 310 VSKIQLFSRPDFLGDHFSFEDDQAALPASF-RPQSCRVHGGSWILFDETNFEGDQHILSE 368
Query: 61 GKYPDYQHWMGLSDSVQSC--RIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRL 118
G++P L+ +V ++ H S + LY + + G EL+ + +
Sbjct: 369 GEFPTLTAMGCLASTVLGSLQKVSLHFSEPSIFLYGLECFEGKEIELSREVRSLQAEGFN 428
Query: 119 PEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSL 167
+ S+ + G WVL E ++RGRQ+L+ + + + G +VGSL
Sbjct: 429 NHVLSVRIKGGIWVLCEHSDFRGRQWLVGSCEITNWLTYSGTQ-RVGSL 476
Score = 50.8 bits (120), Expect = 6e-07
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 80 RIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNY 139
R++ S+ ++ L+ + +G +LT+ L + ++ S V G W+LY P +
Sbjct: 20 RVVWDYSTPEISLFSEEGLKGEQVKLTEALKNSQGLEKPLQVASATVSAGLWLLYPKPLF 79
Query: 140 RGRQYLLRPGDYRRYHDWGGADAKVGSLR 168
Y+L PG+Y WG +D VGSL+
Sbjct: 80 EDTPYILEPGEYPTSEAWGTSDPSVGSLK 108
>gi|4503061 crystallin, beta B1 [Homo sapiens]
Length = 252
Score = 108 bits (271), Expect = 2e-24
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 5/175 (2%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLRVY-FSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
++ +E +FQGR +C NL F R SI V +G W+ +E+ N++G + L +G
Sbjct: 60 RLVVFELENFQGRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKG 119
Query: 62 KYPDYQHWMGL--SDSVQSCRIIP-HTSSHKLRLYERDDYRGLMSELTDDCACVPELFRL 118
+YP + W SD + S R I HK+ L+E +++G E+ D A ++
Sbjct: 120 EYPRWNTWSSSYRSDRLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGF 179
Query: 119 PE-IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTD 172
+ + S+ V G WV Y+ P YRG QYLL PGD+R +++WG ++ SLRR+ D
Sbjct: 180 SDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQSLRRLRD 234
>gi|12056461 crystallin, beta A3 [Homo sapiens]
Length = 215
Score = 105 bits (263), Expect = 2e-23
Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 14/182 (7%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLRVY-FSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
KIT Y+ +FQG+ S CPN+ F S++V+SG W+ YE ++ G Q+ L RG
Sbjct: 32 KITIYDQENFQGKRMEFTSSCPNVSERSFDNVRSLKVESGAWIGYEHTSFCGQQFILERG 91
Query: 62 KYPDYQHWMGLS----DSVQSCRII--PHTSSHKLRLYERDDYRGLMSELTDDCACVPEL 115
+YP + W G + + + S R I + K+ ++E++++ G E++DD + +
Sbjct: 92 EYPRWDAWSGSNAYHIERLMSFRPICSANHKESKMTIFEKENFIGRQWEISDDYPSLQAM 151
Query: 116 -FRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL----RPGDYRRYHDWG--GADAKVGSLR 168
+ E+ S+ + G WV Y+ P YRG QY+L GDY+ + +WG +++ S+R
Sbjct: 152 GWFNNEVGSMKIQSGAWVCYQYPGYRGYQYILECDHHGGDYKHWREWGSHAQTSQIQSIR 211
Query: 169 RV 170
R+
Sbjct: 212 RI 213
>gi|16936542 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 103 bits (257), Expect = 8e-23
Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 14/180 (7%)
Query: 4 ITFYEDRDFQGRCYNCISDCPNL--RVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
+T +++ DFQGR +SDC N+ R R S++V++G W+ +E P++QG Q+ L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 KYPDYQHWMGL----SDSVQSCR--IIPHTSSHKLRLYERDDYRGLMSELTDDCACVPEL 115
YP + W G S+ + S R + + + ++ L+E D+++G +L DD +P +
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 116 -FRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL----RPGDYRRYHDWGGADAKVGSLRRV 170
+ ++ SL V G WV Y+ P YRG QY+L G++ Y + G A G L+ +
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGEL-GTQAHTGQLQSI 192
Score = 66.2 bits (160), Expect = 1e-11
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 83 PHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGR 142
P + L L++ +D++G L DCA V E LP + S+ V G WV +E P+++G+
Sbjct: 7 PGPAPASLTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQ 66
Query: 143 QYLLRPGDYRRYHDWGGADA 162
Q++L GDY R+ W G+ +
Sbjct: 67 QFILEKGDYPRWSAWSGSSS 86
Score = 47.4 bits (111), Expect = 6e-06
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLRVY---FSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
++T +E +FQG ++ + D P+L S++V SG W+ Y+ P Y+G+QY L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 RGKY 63
R ++
Sbjct: 167 RDRH 170
>gi|16936540 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 103 bits (257), Expect = 8e-23
Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 14/180 (7%)
Query: 4 ITFYEDRDFQGRCYNCISDCPNL--RVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
+T +++ DFQGR +SDC N+ R R S++V++G W+ +E P++QG Q+ L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 KYPDYQHWMGL----SDSVQSCR--IIPHTSSHKLRLYERDDYRGLMSELTDDCACVPEL 115
YP + W G S+ + S R + + + ++ L+E D+++G +L DD +P +
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 116 -FRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL----RPGDYRRYHDWGGADAKVGSLRRV 170
+ ++ SL V G WV Y+ P YRG QY+L G++ Y + G A G L+ +
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGEL-GTQAHTGQLQSI 192
Score = 66.2 bits (160), Expect = 1e-11
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 83 PHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGR 142
P + L L++ +D++G L DCA V E LP + S+ V G WV +E P+++G+
Sbjct: 7 PGPAPASLTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQ 66
Query: 143 QYLLRPGDYRRYHDWGGADA 162
Q++L GDY R+ W G+ +
Sbjct: 67 QFILEKGDYPRWSAWSGSSS 86
Score = 47.4 bits (111), Expect = 6e-06
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLRVY---FSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
++T +E +FQG ++ + D P+L S++V SG W+ Y+ P Y+G+QY L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 RGKY 63
R ++
Sbjct: 167 RDRH 170
>gi|7019357 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 103 bits (257), Expect = 8e-23
Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 14/180 (7%)
Query: 4 ITFYEDRDFQGRCYNCISDCPNL--RVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
+T +++ DFQGR +SDC N+ R R S++V++G W+ +E P++QG Q+ L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 KYPDYQHWMGL----SDSVQSCR--IIPHTSSHKLRLYERDDYRGLMSELTDDCACVPEL 115
YP + W G S+ + S R + + + ++ L+E D+++G +L DD +P +
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 116 -FRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL----RPGDYRRYHDWGGADAKVGSLRRV 170
+ ++ SL V G WV Y+ P YRG QY+L G++ Y + G A G L+ +
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGEL-GTQAHTGQLQSI 192
Score = 66.2 bits (160), Expect = 1e-11
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 83 PHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGR 142
P + L L++ +D++G L DCA V E LP + S+ V G WV +E P+++G+
Sbjct: 7 PGPAPASLTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQ 66
Query: 143 QYLLRPGDYRRYHDWGGADA 162
Q++L GDY R+ W G+ +
Sbjct: 67 QFILEKGDYPRWSAWSGSSS 86
Score = 47.4 bits (111), Expect = 6e-06
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLRVY---FSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
++T +E +FQG ++ + D P+L S++V SG W+ Y+ P Y+G+QY L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 RGKY 63
R ++
Sbjct: 167 RDRH 170
>gi|4503059 crystallin, beta A4 [Homo sapiens]
Length = 196
Score = 102 bits (253), Expect = 2e-22
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 3 KITFYEDRDFQGRCYNCISDCPN-LRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61
K+ +++ FQGR + ++CP+ L + F S++V SG W+ +E +QG QY L RG
Sbjct: 13 KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
Query: 62 KYPDYQHWMGLS-------DSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPE 114
+YP + W G + S + H S +L ++E++++ G EL+DD +
Sbjct: 73 EYPSWDAWGGNTAYPAERLTSFRPAACANHRDS-RLTIFEQENFLGKKGELSDDYPSLQA 131
Query: 115 L-FRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL----RPGDYRRYHDWG--GADAKVGSL 167
+ + E+ S HV G WV + P YRG QY+L GDY+ + +WG +V S+
Sbjct: 132 MGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSI 191
Query: 168 RRV 170
RR+
Sbjct: 192 RRI 194
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 97.4 bits (241), Expect = 5e-21
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 17/185 (9%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNL--------------RVYFSRCNSIRVDSGCWMLYER 48
K+ YE F+G+C + + + F+ S++V G W+ YE+
Sbjct: 1219 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYEK 1278
Query: 49 PNYQGHQYFLRRGKYPDYQHWMGLSDSVQSCR-IIPHTSSHKLRLYERDDY--RGLMSEL 105
P + GHQY L G+Y D++ W G + +QS R I+ S+ + +Y ++ +G ++
Sbjct: 1279 PGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPILGDFSNAHMIMYSEKNFGSKGSSIDV 1338
Query: 106 TDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVG 165
A + E + S++VL G WV YE P++ G QY+L G Y + DWGG + K+
Sbjct: 1339 LGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKIS 1398
Query: 166 SLRRV 170
S++ +
Sbjct: 1399 SVQPI 1403
Score = 84.7 bits (208), Expect = 4e-17
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 35 SIRVDSGCWMLYERPNYQGHQYFLRRGKYPDYQHWMGLSDSVQSCRI-------IPHTSS 87
S++V G W++YE P +QG + L G+YPD W + + S R + +
Sbjct: 1158 SMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGSMRPLKMGGRKVEFPTD 1217
Query: 88 HKLRLYERDDYRGLMSEL-TDDCACVPELFRLPE-----------IYSLHVLEGCWVLYE 135
K+ +YE+ + G EL T C+ V E E + S+ VL G WV YE
Sbjct: 1218 PKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYE 1277
Query: 136 MPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRV 170
P + G QYLL G+YR + WGG + ++ SLR +
Sbjct: 1278 KPGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPI 1312
Score = 83.2 bits (204), Expect = 1e-16
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 3 KITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRGK 62
+I + + FQG + + FS S RV G W++Y+ N+ G+QY L G
Sbjct: 1416 QIHLFSEPQFQGHSQSFEETTSQIDDSFST-KSCRVSGGSWVVYDGENFTGNQYVLEEGH 1474
Query: 63 YPDYQHWMGLSDSV--QSCRIIP-HTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLP 119
YP MG +S R I S + L+ER+D++G EL + + L
Sbjct: 1475 YPCLSA-MGCPPGATFKSLRFIDVEFSEPTIILFEREDFKGKKIELNAETVNLRSLGFNT 1533
Query: 120 EIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLR 168
+I S+ V+ G WV YE +YRGRQ+LL P + ++++ G ++GSLR
Sbjct: 1534 QIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSGC-RQIGSLR 1581
Score = 75.9 bits (185), Expect = 2e-14
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 2 GKITFYEDRDFQGRCYNCISDCPNLRVY-FSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
GK+ Y + D +C SD + + S I+V GCW+LYE+PN++GH L
Sbjct: 1022 GKVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVILIKVVRGCWILYEQPNFEGHSIPLEE 1081
Query: 61 GKYPDYQHWMGLSDSVQ--------------SCR-IIPHTSSHKLRLYERDDYRGLMSEL 105
G+ W G+ D ++ S R ++ + L+ + G++S
Sbjct: 1082 GELELSGLW-GIEDILERHEEAESDKPVVIGSIRHVVQDYRVSHIDLFTEPEGLGILSSY 1140
Query: 106 TDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVG 165
DD + + + S+ V G W++YE P ++G ++L PG+Y W A +G
Sbjct: 1141 FDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIG 1200
Query: 166 SLR 168
S+R
Sbjct: 1201 SMR 1203
Score = 39.3 bits (90), Expect = 0.002
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 13/70 (18%)
Query: 118 LPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGAD-------------AKV 164
L + + V+ GCW+LYE PN+ G L G+ WG D +
Sbjct: 1051 LSPVILIKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGIEDILERHEEAESDKPVVI 1110
Query: 165 GSLRRVTDLY 174
GS+R V Y
Sbjct: 1111 GSIRHVVQDY 1120
>gi|21389517 gammaN-crystallin [Homo sapiens]
Length = 182
Score = 83.2 bits (204), Expect = 1e-16
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 GKITFYEDRDFQGRCYNCISDCPNL--RVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
GKIT YE + F G+ DC N R + +R NSI V+SG W+ + P+++G Q+ L
Sbjct: 6 GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
Query: 60 RGKYPDYQHWMGLSDSVQSCRII-PHTSSHKLRLYERDDYRGLMSELTDD 108
G YPD+ W SD + SCR + H +L ++E ++ G E +D
Sbjct: 66 HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLED 115
Score = 57.8 bits (138), Expect = 5e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 87 SHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL 146
S K+ LYE + G E+ DC + + + S+HV G WV + P++RG+Q++L
Sbjct: 5 SGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFIL 64
Query: 147 RPGDYRRYHDWGGADAKVGSLRRV 170
GDY + W +GS R V
Sbjct: 65 EHGDYPDFFRWNSHSDHMGSCRPV 88
>gi|90403579 beta-gamma crystallin domain containing 3 [Homo
sapiens]
Length = 1022
Score = 82.0 bits (201), Expect = 2e-16
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 3 KITFYEDRDFQGRCYNC---ISDCPNLRVY---FSRCNSIRVDSGCWMLYERPNYQGHQY 56
K+ YE F G+ I PN F R SIRV G W+ YE+ +++G Q+
Sbjct: 532 KVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYEKEHFKGQQF 591
Query: 57 FLRRGKYPDYQHWMGLSDSVQSCRIIP-HTSSHKLRLYERDDYRGLMSELTD-DCACVPE 114
L G + D LS + S R + + + L+E D G ++T+ + + + E
Sbjct: 592 LLEEGDFEDSNACGALSSPILSFRYLQANFIESSVTLFESDLESGKFIDITNQEISDLEE 651
Query: 115 LFRLPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRV 170
+ + S+HV G WV Y+ + G QY+L G Y+ + DWGG++ + S+R +
Sbjct: 652 IGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSNNIIMSIRPI 707
Score = 65.1 bits (157), Expect = 3e-11
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 31 SRCNSIRVDSGCWMLYERPNYQGHQYFLRRGKYPDYQHWMGLSDSVQSCRIIP------H 84
S+ SI V SG W+ Y++ + G QY L +GKY + W G ++ + S R I +
Sbjct: 656 SKTRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSNNIIMSIRPIQLEPLGIN 715
Query: 85 TSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGRQY 144
H L+ + + ++G + T++ + + L S VL GCW+LY +
Sbjct: 716 EPPHLLKAFSKPGFQGECIDFTEETSDLTSLMPC----SFKVLRGCWLLYYQEDMFVNHC 771
Query: 145 LLRPGDYRRYHDWGGADAKVGSLRRV 170
+L G Y G +KV SL+ +
Sbjct: 772 VLEEGLYADLTSCGCPASKVKSLKPI 797
Score = 47.0 bits (110), Expect = 8e-06
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 10/161 (6%)
Query: 12 FQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRGKYPDYQHWMG 71
FQG C + + +L C S +V GCW+LY + + + L G Y D
Sbjct: 729 FQGECIDFTEETSDLTSLMP-C-SFKVLRGCWLLYYQEDMFVNHCVLEEGLYADLTSCGC 786
Query: 72 LSDSVQSCRIIPHTSSH-KLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGC 130
+ V+S + I + + L+ + G L + V S+ V G
Sbjct: 787 PASKVKSLKPIDYVFEEPSISLFALEHCEGRELHLEEAVNSVLNKDLHFYTQSVWVKSGL 846
Query: 131 WVLYEMPNYRGRQYLLRPGD---YRRYHDWGGADAKVGSLR 168
W+ YE N+ GRQ LLRP + + + W +GSLR
Sbjct: 847 WIAYEGSNFLGRQILLRPNEIPNWTAFSRW----KTIGSLR 883
Score = 40.4 bits (93), Expect = 8e-04
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 124 LHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAK-------VGSLRRV 170
+ V+ GCW+LYE P++RG++ +L G+ DW + + +GSL+RV
Sbjct: 381 IKVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLKRV 434
Score = 37.4 bits (85), Expect = 0.007
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 33/131 (25%)
Query: 36 IRVDSGCWMLYERPNYQGHQYFLRRGKYPDYQHWM----------GLSDSVQSCRIIPHT 85
I+V GCW+LYE+P+++G + L G+ + W+ + S++ R++
Sbjct: 381 IKVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLK--RVLKDC 438
Query: 86 SSHKLRLYERDDYRGLMSELTDDCACVP----------ELFRLPEIYSLHVLEGCWVLYE 135
S ++ L+ + D AC P E + + S V G W+ Y
Sbjct: 439 SIPEIELFPQ-----------SDPACCPVYIQRAVPNLEELNISKSVSFTVKSGVWLAYP 487
Query: 136 MPNYRGRQYLL 146
N++G+ +L
Sbjct: 488 DINFKGQATVL 498
>gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1
[Homo sapiens]
Length = 1045
Score = 28.9 bits (63), Expect = 2.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 50 NYQGHQYFLRRGKYPDYQHWMGLSDSVQSCRIIPHTSSHK 89
+++ H Y+ R ++ WM + S S PH SHK
Sbjct: 1001 HFKSHVYYFRAESEYTFERWMEVIRSATSSASRPHVLSHK 1040
>gi|197927446 sarcosine dehydrogenase precursor [Homo sapiens]
Length = 918
Score = 27.3 bits (59), Expect = 6.8
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
Query: 20 ISDCPNLRVYFSRCN----SIRVDSGC------WMLYERPNYQGHQYFLRRGKY--PDYQ 67
+ + P LR +F C + + GC W+++ RP H Y +RR + D+
Sbjct: 394 MGEAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHP 453
Query: 68 HWM 70
W+
Sbjct: 454 RWI 456
>gi|21361378 sarcosine dehydrogenase precursor [Homo sapiens]
Length = 918
Score = 27.3 bits (59), Expect = 6.8
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
Query: 20 ISDCPNLRVYFSRCN----SIRVDSGC------WMLYERPNYQGHQYFLRRGKY--PDYQ 67
+ + P LR +F C + + GC W+++ RP H Y +RR + D+
Sbjct: 394 MGEAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHP 453
Query: 68 HWM 70
W+
Sbjct: 454 RWI 456
>gi|7706113 protocadherin 12 precursor [Homo sapiens]
Length = 1184
Score = 27.3 bits (59), Expect = 6.8
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 99 RGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYR-RYHDW 157
R + ELT D V ++ +L + LH + PN+RG +YL +PG R D
Sbjct: 946 RNPVEELTVDSPPVQQISQLLSL--LHQGQ----FQPKPNHRGNKYLAKPGGSRSAIPDT 999
Query: 158 GGADAKVG 165
G A+ G
Sbjct: 1000 DGPSARAG 1007
>gi|239755460 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 1064
Score = 26.9 bits (58), Expect = 8.9
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 5 TFYEDRDFQGRCYN--CISDCPNLRVYFSRCNS 35
T Y RD G CY C DC +R S C S
Sbjct: 270 TIYRHRDLAGHCYYALCSQDCQVVRGVDSDCPS 302
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.144 0.493
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,323,182
Number of Sequences: 37866
Number of extensions: 322940
Number of successful extensions: 755
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 638
Number of HSP's gapped (non-prelim): 45
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.