Guide to the Human Genome
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Name: OR52B6 Sequence: fasta or formatted (335aa) NCBI GI: 148229439
Description:

olfactory receptor, family 52, subfamily B, member 6

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         31           3
 C cysteine            3.3         11           1
 D aspartate           2.1          7           1
 E glutamate           1.8          6           1
 F phenylalanine       6.0         20           2
 G glycine             5.4         18           2
 H histidine           4.2         14           1
 I isoleucine         11.6         39           2
 K lysine              2.7          9           1
 L leucine            14.0         47           2
 M methionine          4.2         14           1
 N asparagine          2.7          9           2
 P proline             3.6         12           2
 Q glutamine           2.4          8           1
 R arginine            2.7          9           1
 S serine              9.0         30           1
 T threonine           4.5         15           3
 V valine              6.0         20           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily B, member ... 
OR52B2                0.545   olfactory receptor, family 52, subfamily B, member 2...
OR52H1                0.505   olfactory receptor, family 52, subfamily H, member 1...
OR52D1                0.495   olfactory receptor, family 52, subfamily D, member 1...
OR52E2                0.478   olfactory receptor, family 52, subfamily E, member 2...
OR52B4                0.467   olfactory receptor, family 52, subfamily B, member 4...
OR52E8                0.456   olfactory receptor, family 52, subfamily E, member 8...
OR52E4                0.447   olfactory receptor, family 52, subfamily E, member 4...
OR52N1                0.439   olfactory receptor, family 52, subfamily N, member 1...
OR52N4                0.438   olfactory receptor, family 52, subfamily N, member ...
OR52K1                0.436   olfactory receptor, family 52, subfamily K, member 1...
OR52N2                0.434   olfactory receptor, family 52, subfamily N, member 2...
OR52E6                0.434   olfactory receptor, family 52, subfamily E, member 6...
OR52K2                0.433   olfactory receptor, family 52, subfamily K, member 2...
OR52J3                0.431   olfactory receptor, family 52, subfamily J, member ...
OR52N5                0.422   olfactory receptor, family 52, subfamily N, member 5...
OR51I2                0.411   olfactory receptor, family 51, subfamily I, member 2...
OR51L1                0.406   olfactory receptor, family 51, subfamily L, member 1...
OR52L1                0.406   olfactory receptor, family 52, subfamily L, member ...
OR51G2                0.403   olfactory receptor, family 51, subfamily G, member 2...
OR52R1                0.394   olfactory receptor, family 52, subfamily R, member ...
OR52M1                0.388   olfactory receptor, family 52, subfamily M, member 1...
OR52A1                0.383   olfactory receptor, family 52, subfamily A, member ...
OR52A5                0.383   olfactory receptor, family 52, subfamily A, member 5...
OR51E1                0.380   olfactory receptor, family 51, subfamily E, member ...
OR52I1                0.380   olfactory receptor, family 52, subfamily I, member 1...
OR51E2                0.378   olfactory receptor, family 51, subfamily E, member 2...
OR51D1                0.378   olfactory receptor, family 51, subfamily D, member 1...
OR51F1                0.375   olfactory receptor, family 51, subfamily F, member 1...
OR51F2                0.372   olfactory receptor, family 51, subfamily F, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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