Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR52N4 Sequence: fasta or formatted (321aa) NCBI GI: 221219017
Description:

olfactory receptor, family 52, subfamily N, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         20           1
 C cysteine            4.4         14           1
 D aspartate           3.7         12           1
 E glutamate           1.6          5           1
 F phenylalanine       6.9         22           2
 G glycine             5.0         16           1
 H histidine           3.1         10           1
 I isoleucine          9.7         31           2
 K lysine              4.0         13           1
 L leucine            11.8         38           3
 M methionine          4.7         15           1
 N asparagine          3.1         10           1
 P proline             5.0         16           2
 Q glutamine           1.2          4           1
 R arginine            3.1         10           1
 S serine              6.9         22           2
 T threonine           6.9         22           1
 V valine              6.9         22           2
 W tryptophan          0.9          3           1
 Y tyrosine            5.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily N, member ... 
OR52N1                0.740   olfactory receptor, family 52, subfamily N, member 1...
OR52N2                0.732   olfactory receptor, family 52, subfamily N, member 2...
OR52N5                0.689   olfactory receptor, family 52, subfamily N, member 5...
OR52R1                0.516   olfactory receptor, family 52, subfamily R, member ...
OR52E4                0.514   olfactory receptor, family 52, subfamily E, member 4...
OR52D1                0.503   olfactory receptor, family 52, subfamily D, member 1...
OR52A5                0.494   olfactory receptor, family 52, subfamily A, member 5...
OR52E8                0.494   olfactory receptor, family 52, subfamily E, member 8...
OR52E2                0.489   olfactory receptor, family 52, subfamily E, member 2...
OR52K1                0.486   olfactory receptor, family 52, subfamily K, member 1...
OR52J3                0.481   olfactory receptor, family 52, subfamily J, member ...
OR51F2                0.481   olfactory receptor, family 51, subfamily F, member 2...
OR52H1                0.476   olfactory receptor, family 52, subfamily H, member 1...
OR52L1                0.475   olfactory receptor, family 52, subfamily L, member ...
OR52A1                0.473   olfactory receptor, family 52, subfamily A, member ...
OR52E6                0.473   olfactory receptor, family 52, subfamily E, member 6...
OR52K2                0.467   olfactory receptor, family 52, subfamily K, member 2...
OR52M1                0.465   olfactory receptor, family 52, subfamily M, member 1...
OR52B2                0.462   olfactory receptor, family 52, subfamily B, member 2...
OR51E1                0.461   olfactory receptor, family 51, subfamily E, member ...
OR51I1                0.453   olfactory receptor, family 51, subfamily I, member 1...
OR51G1                0.446   olfactory receptor, family 51, subfamily G, member 1...
OR51G2                0.445   olfactory receptor, family 51, subfamily G, member 2...
OR51I2                0.443   olfactory receptor, family 51, subfamily I, member 2...
OR52B4                0.442   olfactory receptor, family 52, subfamily B, member 4...
OR52B6                0.442   olfactory receptor, family 52, subfamily B, member ...
OR51E2                0.435   olfactory receptor, family 51, subfamily E, member 2...
OR51L1                0.426   olfactory receptor, family 51, subfamily L, member 1...
OR51M1                0.423   olfactory receptor, family 51, subfamily M, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press