Guide to the Human Genome
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Name: OR52E4 Sequence: fasta or formatted (312aa) NCBI GI: 52353252
Description:

olfactory receptor, family 52, subfamily E, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         14           1
 C cysteine            2.9          9           1
 D aspartate           1.9          6           1
 E glutamate           1.9          6           1
 F phenylalanine       8.3         26           2
 G glycine             5.1         16           2
 H histidine           3.8         12           1
 I isoleucine         11.9         37           2
 K lysine              2.6          8           1
 L leucine            12.5         39           3
 M methionine          4.5         14           1
 N asparagine          3.8         12           1
 P proline             5.8         18           2
 Q glutamine           2.9          9           1
 R arginine            3.2         10           1
 S serine              4.8         15           2
 T threonine           5.4         17           1
 V valine              9.3         29           3
 W tryptophan          0.6          2           1
 Y tyrosine            4.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily E, member 4... 
OR52E8                0.706   olfactory receptor, family 52, subfamily E, member 8...
OR52E2                0.686   olfactory receptor, family 52, subfamily E, member 2...
OR52E6                0.673   olfactory receptor, family 52, subfamily E, member 6...
OR52J3                0.602   olfactory receptor, family 52, subfamily J, member ...
OR52B2                0.561   olfactory receptor, family 52, subfamily B, member 2...
OR52H1                0.554   olfactory receptor, family 52, subfamily H, member 1...
OR52D1                0.548   olfactory receptor, family 52, subfamily D, member 1...
OR52N4                0.536   olfactory receptor, family 52, subfamily N, member ...
OR52N2                0.531   olfactory receptor, family 52, subfamily N, member 2...
OR52R1                0.510   olfactory receptor, family 52, subfamily R, member ...
OR52N5                0.502   olfactory receptor, family 52, subfamily N, member 5...
OR52N1                0.500   olfactory receptor, family 52, subfamily N, member 1...
OR51G2                0.492   olfactory receptor, family 51, subfamily G, member 2...
OR52K2                0.487   olfactory receptor, family 52, subfamily K, member 2...
OR52A5                0.487   olfactory receptor, family 52, subfamily A, member 5...
OR52L1                0.485   olfactory receptor, family 52, subfamily L, member ...
OR52B4                0.485   olfactory receptor, family 52, subfamily B, member 4...
OR52K1                0.485   olfactory receptor, family 52, subfamily K, member 1...
OR52M1                0.477   olfactory receptor, family 52, subfamily M, member 1...
OR52A1                0.474   olfactory receptor, family 52, subfamily A, member ...
OR51E1                0.472   olfactory receptor, family 51, subfamily E, member ...
OR52B6                0.470   olfactory receptor, family 52, subfamily B, member ...
OR51I2                0.459   olfactory receptor, family 51, subfamily I, member 2...
OR51F2                0.457   olfactory receptor, family 51, subfamily F, member 2...
OR51I1                0.456   olfactory receptor, family 51, subfamily I, member 1...
OR51A4                0.451   olfactory receptor, family 51, subfamily A, member 4...
OR51E2                0.447   olfactory receptor, family 51, subfamily E, member 2...
OR51A7                0.444   olfactory receptor, family 51, subfamily A, member 7...
OR51G1                0.442   olfactory receptor, family 51, subfamily G, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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