Guide to the Human Genome
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Name: OR52R1 Sequence: fasta or formatted (394aa) NCBI GI: 116517321
Description:

olfactory receptor, family 52, subfamily R, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         25           1
 C cysteine            4.1         16           2
 D aspartate           2.8         11           1
 E glutamate           1.8          7           1
 F phenylalanine       6.3         25           2
 G glycine             4.3         17           1
 H histidine           4.1         16           1
 I isoleucine          9.9         39           2
 K lysine              2.0          8           1
 L leucine            11.2         44           2
 M methionine          4.1         16           1
 N asparagine          4.1         16           3
 P proline             5.6         22           2
 Q glutamine           3.6         14           1
 R arginine            3.6         14           1
 S serine              8.9         35           3
 T threonine           3.8         15           1
 V valine              8.9         35           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily R, member ... 
OR52L1                0.438   olfactory receptor, family 52, subfamily L, member ...
OR52N4                0.421   olfactory receptor, family 52, subfamily N, member ...
OR52J3                0.405   olfactory receptor, family 52, subfamily J, member ...
OR52E2                0.403   olfactory receptor, family 52, subfamily E, member 2...
OR52E4                0.399   olfactory receptor, family 52, subfamily E, member 4...
OR52N1                0.395   olfactory receptor, family 52, subfamily N, member 1...
OR52D1                0.391   olfactory receptor, family 52, subfamily D, member 1...
OR52E8                0.389   olfactory receptor, family 52, subfamily E, member 8...
OR52A1                0.387   olfactory receptor, family 52, subfamily A, member ...
OR52H1                0.384   olfactory receptor, family 52, subfamily H, member 1...
OR52M1                0.382   olfactory receptor, family 52, subfamily M, member 1...
OR52N2                0.380   olfactory receptor, family 52, subfamily N, member 2...
OR52A5                0.378   olfactory receptor, family 52, subfamily A, member 5...
OR52K1                0.377   olfactory receptor, family 52, subfamily K, member 1...
OR52K2                0.368   olfactory receptor, family 52, subfamily K, member 2...
OR52B2                0.368   olfactory receptor, family 52, subfamily B, member 2...
OR52N5                0.364   olfactory receptor, family 52, subfamily N, member 5...
OR51E1                0.358   olfactory receptor, family 51, subfamily E, member ...
OR52E6                0.356   olfactory receptor, family 52, subfamily E, member 6...
OR51G1                0.350   olfactory receptor, family 51, subfamily G, member 1...
OR51E2                0.349   olfactory receptor, family 51, subfamily E, member 2...
OR51D1                0.346   olfactory receptor, family 51, subfamily D, member 1...
OR51F2                0.345   olfactory receptor, family 51, subfamily F, member 2...
OR51G2                0.342   olfactory receptor, family 51, subfamily G, member 2...
OR52B4                0.336   olfactory receptor, family 52, subfamily B, member 4...
OR51I2                0.335   olfactory receptor, family 51, subfamily I, member 2...
OR52W1                0.328   olfactory receptor, family 52, subfamily W, member 1...
OR52B6                0.324   olfactory receptor, family 52, subfamily B, member ...
OR51I1                0.322   olfactory receptor, family 51, subfamily I, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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