Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR52N1 Sequence: fasta or formatted (320aa) NCBI GI: 50054463
Description:

olfactory receptor, family 52, subfamily N, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         22           1
 C cysteine            3.8         12           1
 D aspartate           2.8          9           1
 E glutamate           1.6          5           1
 F phenylalanine       8.4         27           2
 G glycine             5.6         18           2
 H histidine           4.1         13           2
 I isoleucine          8.8         28           2
 K lysine              3.1         10           1
 L leucine            12.5         40           2
 M methionine          4.7         15           1
 N asparagine          4.1         13           1
 P proline             4.4         14           2
 Q glutamine           1.2          4           1
 R arginine            2.8          9           1
 S serine              5.9         19           2
 T threonine           8.1         26           1
 V valine              6.9         22           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily N, member 1... 
OR52N4                0.746   olfactory receptor, family 52, subfamily N, member ...
OR52N2                0.742   olfactory receptor, family 52, subfamily N, member 2...
OR52N5                0.692   olfactory receptor, family 52, subfamily N, member 5...
OR52D1                0.494   olfactory receptor, family 52, subfamily D, member 1...
OR52R1                0.488   olfactory receptor, family 52, subfamily R, member ...
OR52E4                0.483   olfactory receptor, family 52, subfamily E, member 4...
OR52E8                0.479   olfactory receptor, family 52, subfamily E, member 8...
OR52E2                0.477   olfactory receptor, family 52, subfamily E, member 2...
OR52J3                0.471   olfactory receptor, family 52, subfamily J, member ...
OR52B2                0.467   olfactory receptor, family 52, subfamily B, member 2...
OR51F2                0.464   olfactory receptor, family 51, subfamily F, member 2...
OR52E6                0.461   olfactory receptor, family 52, subfamily E, member 6...
OR52K1                0.459   olfactory receptor, family 52, subfamily K, member 1...
OR52A5                0.458   olfactory receptor, family 52, subfamily A, member 5...
OR52L1                0.458   olfactory receptor, family 52, subfamily L, member ...
OR52K2                0.456   olfactory receptor, family 52, subfamily K, member 2...
OR52H1                0.453   olfactory receptor, family 52, subfamily H, member 1...
OR52B6                0.447   olfactory receptor, family 52, subfamily B, member ...
OR52A1                0.447   olfactory receptor, family 52, subfamily A, member ...
OR51E1                0.437   olfactory receptor, family 51, subfamily E, member ...
OR51G1                0.429   olfactory receptor, family 51, subfamily G, member 1...
OR51I1                0.428   olfactory receptor, family 51, subfamily I, member 1...
OR51G2                0.426   olfactory receptor, family 51, subfamily G, member 2...
OR51I2                0.426   olfactory receptor, family 51, subfamily I, member 2...
OR51L1                0.421   olfactory receptor, family 51, subfamily L, member 1...
OR52M1                0.418   olfactory receptor, family 52, subfamily M, member 1...
OR52B4                0.415   olfactory receptor, family 52, subfamily B, member 4...
OR51E2                0.415   olfactory receptor, family 51, subfamily E, member 2...
OR51F1                0.409   olfactory receptor, family 51, subfamily F, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press