Guide to the Human Genome
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Name: OR8S1 Sequence: fasta or formatted (359aa) NCBI GI: 147907090
Description:

olfactory receptor, family 8, subfamily S, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         25           2
 C cysteine            3.1         11           1
 D aspartate           1.9          7           1
 E glutamate           3.6         13           1
 F phenylalanine       4.7         17           2
 G glycine             6.1         22           1
 H histidine           3.6         13           2
 I isoleucine          6.1         22           2
 K lysine              3.1         11           1
 L leucine            17.3         62           3
 M methionine          3.6         13           1
 N asparagine          2.8         10           1
 P proline             5.0         18           1
 Q glutamine           2.5          9           1
 R arginine            4.5         16           2
 S serine             10.6         38           2
 T threonine           5.0         18           1
 V valine              5.3         19           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily S, member 1... 
OR5F1                 0.349   olfactory receptor, family 5, subfamily F, member 1 ...
OR5AN1                0.348   olfactory receptor, family 5, subfamily AN, member 1...
OR5A2                 0.348   olfactory receptor, family 5, subfamily A, member 2 ...
OR10A6                0.341   olfactory receptor, family 10, subfamily A, member 6...
OR8A1                 0.338   olfactory receptor, family 8, subfamily A, member 1 ...
OR1J1                 0.338   olfactory receptor, family 1, subfamily J, member 1 ...
OR2F1                 0.332   olfactory receptor, family 2, subfamily F, member 1 ...
OR8H3                 0.332   olfactory receptor, family 8, subfamily H, member 3 ...
OR5A1                 0.330   olfactory receptor, family 5, subfamily A, member 1 ...
OR2D3                 0.330   olfactory receptor, family 2, subfamily D, member 3 ...
OR1L6                 0.329   olfactory receptor, family 1, subfamily L, member 6 ...
OR5AU1                0.329   olfactory receptor, family 5, subfamily AU, member 1...
OR1F1                 0.328   olfactory receptor, family 1, subfamily F, member 1 [...
OR7D2                 0.328   olfactory receptor, family 7, subfamily D, member 2 ...
OR13C8                0.328   olfactory receptor, family 13, subfamily C, member 8...
OR10A7                0.326   olfactory receptor, family 10, subfamily A, member 7...
OR7G3                 0.326   olfactory receptor, family 7, subfamily G, member 3 ...
OR7A5                 0.325   olfactory receptor, family 7, subfamily A, member 5 [...
OR8B12                0.325   olfactory receptor, family 8, subfamily B, member 12...
OR5L2                 0.325   olfactory receptor, family 5, subfamily L, member 2 ...
OR7D4                 0.325   olfactory receptor, family 7, subfamily D, member 4 ...
OR7C1                 0.325   olfactory receptor, family 7, subfamily C, member 1 ...
OR13C2                0.325   olfactory receptor, family 13, subfamily C, member 2...
OR5L1                 0.323   olfactory receptor, family 5, subfamily L, member 1 ...
OR8G1                 0.323   olfactory receptor, family 8, subfamily G, member 1 ...
OR13C9                0.323   olfactory receptor, family 13, subfamily C, member 9...
OR5J2                 0.323   olfactory receptor, family 5, subfamily J, member 2 ...
OR9G4                 0.323   olfactory receptor, family 9, subfamily G, member 4 ...
OR8H1                 0.323   olfactory receptor, family 8, subfamily H, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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