C2orf54 4227

Name: C2orf54	Sequence: fasta or formatted (279aa)		NCBI GI: 146198668
Description: hypothetical protein LOC79919 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {447aa} hypothetical protein LOC79919 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 21 2 C cysteine 0.7 2 2 D aspartate 5.0 14 1 E glutamate 4.3 12 2 F phenylalanine 3.6 10 1 G glycine 8.2 23 2 H histidine 3.2 9 1 I isoleucine 3.2 9 1 K lysine 2.5 7 1 L leucine 17.2 48 2 M methionine 1.4 4 1 N asparagine 1.4 4 1 P proline 5.0 14 3 Q glutamine 6.1 17 2 R arginine 7.2 20 2 S serine 8.6 24 2 T threonine 4.7 13 1 V valine 6.1 17 2 W tryptophan 2.2 6 1 Y tyrosine 1.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC79919 isoform 2 C2orf54 0.989 hypothetical protein LOC79919 isoform 1 C1orf161 0.036 hypothetical protein LOC126868 MAB21L2 0.021 mab-21-like protein 2 MAB21L1 0.017 mab-21-like protein 1 C3orf59 0.015 hypothetical protein LOC151963 MICAL1 0.013 microtubule associated monoxygenase, calponin and L... MICAL1 0.013 microtubule associated monoxygenase, calponin and L... ITPRIP 0.011 inositol 1,4,5-triphosphate receptor interacting pro... LOC652147 0.008 PREDICTED: similar to U5 snRNP-specific 200kD prote... LOC100293812 0.006 PREDICTED: hypothetical protein FMN1 0.006 formin 1 CD33 0.006 CD33 antigen isoform 1 precursor LOC100289716 0.006 PREDICTED: hypothetical protein XP_002346898 C8orf30B 0.006 PREDICTED: hypothetical protein LOC728071 LOC100289602 0.006 PREDICTED: hypothetical protein XP_002342755 LOC100289602 0.006 PREDICTED: hypothetical protein MSH5 0.006 mutS homolog 5 isoform c MSH5 0.006 mutS homolog 5 isoform b MSH5 0.006 mutS homolog 5 isoform a MSH5 0.006 mutS homolog 5 isoform c C8orf30A 0.006 brain protein 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.