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Search of human proteins with 145301598
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145301598 hypothetical protein LOC23514 [Homo sapiens]
(915 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145301598 hypothetical protein LOC23514 [Homo sapiens] 1836 0.0
gi|239747093 PREDICTED: hypothetical protein XP_002344492 [Homo ... 340 5e-93
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 43 0.002
gi|17975763 myelin transcription factor 1 [Homo sapiens] 42 0.003
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 39 0.017
gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens] 37 0.11
gi|31317270 WD repeat and FYVE domain containing 3 isoform 3 [Ho... 37 0.11
gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Ho... 37 0.11
gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo sapi... 36 0.19
gi|120953251 neuron navigator 3 [Homo sapiens] 36 0.19
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 35 0.24
gi|5032295 dystrophin Dp116 isoform [Homo sapiens] 35 0.24
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 35 0.24
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 35 0.24
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 35 0.24
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 35 0.24
gi|5032311 dystrophin Dp140ab isoform [Homo sapiens] 35 0.24
gi|5032309 dystrophin Dp140b isoform [Homo sapiens] 35 0.24
gi|5032303 dystrophin Dp71ab isoform [Homo sapiens] 35 0.24
gi|5032301 dystrophin Dp71a isoform [Homo sapiens] 35 0.24
gi|5032299 dystrophin Dp71b isoform [Homo sapiens] 35 0.24
gi|5032297 dystrophin Dp71 isoform [Homo sapiens] 35 0.24
gi|5032293 dystrophin Dp140 isoform [Homo sapiens] 35 0.24
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 35 0.24
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 35 0.24
gi|217330641 IWS1 homolog [Homo sapiens] 35 0.24
gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo sapi... 33 0.93
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 33 0.93
gi|155030242 WD repeat domain 60 [Homo sapiens] 33 0.93
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 33 1.6
>gi|145301598 hypothetical protein LOC23514 [Homo sapiens]
Length = 915
Score = 1836 bits (4756), Expect = 0.0
Identities = 915/915 (100%), Positives = 915/915 (100%)
Query: 1 MPRGSRARGSKRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTS 60
MPRGSRARGSKRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTS
Sbjct: 1 MPRGSRARGSKRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTS 60
Query: 61 GNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQR 120
GNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQR
Sbjct: 61 GNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQR 120
Query: 121 DELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIE 180
DELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIE
Sbjct: 121 DELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIE 180
Query: 181 ILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIMERLIDPRTKSTETILHTPQK 240
ILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIMERLIDPRTKSTETILHTPQK
Sbjct: 181 ILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIMERLIDPRTKSTETILHTPQK 240
Query: 241 PTAKFPRTPENSAKKKLLRGGLAERLNGLQNRERSAISLWRHQCISYQKTLSGRKSGVLT 300
PTAKFPRTPENSAKKKLLRGGLAERLNGLQNRERSAISLWRHQCISYQKTLSGRKSGVLT
Sbjct: 241 PTAKFPRTPENSAKKKLLRGGLAERLNGLQNRERSAISLWRHQCISYQKTLSGRKSGVLT 300
Query: 301 VKILELHEECAMQVAMCEQLLGSPATSSSQSVAPRPGAGLKVLFTKETAGYLRGRPQDTV 360
VKILELHEECAMQVAMCEQLLGSPATSSSQSVAPRPGAGLKVLFTKETAGYLRGRPQDTV
Sbjct: 301 VKILELHEECAMQVAMCEQLLGSPATSSSQSVAPRPGAGLKVLFTKETAGYLRGRPQDTV 360
Query: 361 RIFPPWQKLIIPSGSCPVILNTYFCEKVVAKEDSEKTCEVYCPDIPLPRRSISLAQMFVI 420
RIFPPWQKLIIPSGSCPVILNTYFCEKVVAKEDSEKTCEVYCPDIPLPRRSISLAQMFVI
Sbjct: 361 RIFPPWQKLIIPSGSCPVILNTYFCEKVVAKEDSEKTCEVYCPDIPLPRRSISLAQMFVI 420
Query: 421 KGLTNNSPEIQVVCSGVATTGTAWTHGHKEAKQRIPTSTPLRDSLLDVVESQGAASWPGA 480
KGLTNNSPEIQVVCSGVATTGTAWTHGHKEAKQRIPTSTPLRDSLLDVVESQGAASWPGA
Sbjct: 421 KGLTNNSPEIQVVCSGVATTGTAWTHGHKEAKQRIPTSTPLRDSLLDVVESQGAASWPGA 480
Query: 481 GVRVVVQRVYSLPSRDSTRGQQGASSGHTDPAGTRACLLVQDACGMFGEVHLEFTMSKAR 540
GVRVVVQRVYSLPSRDSTRGQQGASSGHTDPAGTRACLLVQDACGMFGEVHLEFTMSKAR
Sbjct: 481 GVRVVVQRVYSLPSRDSTRGQQGASSGHTDPAGTRACLLVQDACGMFGEVHLEFTMSKAR 540
Query: 541 QLEGKSCSLVGMKVLQKVTRGRTAGIFSLIDTLWPPAIPLKTPGRDQPCEEIKTHLPPPA 600
QLEGKSCSLVGMKVLQKVTRGRTAGIFSLIDTLWPPAIPLKTPGRDQPCEEIKTHLPPPA
Sbjct: 541 QLEGKSCSLVGMKVLQKVTRGRTAGIFSLIDTLWPPAIPLKTPGRDQPCEEIKTHLPPPA 600
Query: 601 LCYILTAHPNLGQIDIIDEDPIYKLYQPPVTRCLRDILQMNDLGTRCSFYATVIYQKPQL 660
LCYILTAHPNLGQIDIIDEDPIYKLYQPPVTRCLRDILQMNDLGTRCSFYATVIYQKPQL
Sbjct: 601 LCYILTAHPNLGQIDIIDEDPIYKLYQPPVTRCLRDILQMNDLGTRCSFYATVIYQKPQL 660
Query: 661 KSLLLLEQREIWLLVTDVTLQTKEERDPRLPKTLLVYVAPLCVLGSEVLEALAGAAPHSL 720
KSLLLLEQREIWLLVTDVTLQTKEERDPRLPKTLLVYVAPLCVLGSEVLEALAGAAPHSL
Sbjct: 661 KSLLLLEQREIWLLVTDVTLQTKEERDPRLPKTLLVYVAPLCVLGSEVLEALAGAAPHSL 720
Query: 721 FFKDALRDQGRIVCAERTVLLLQKPLLSVVSGASSCELPGPVMLDSLDSATPVNSICSVQ 780
FFKDALRDQGRIVCAERTVLLLQKPLLSVVSGASSCELPGPVMLDSLDSATPVNSICSVQ
Sbjct: 721 FFKDALRDQGRIVCAERTVLLLQKPLLSVVSGASSCELPGPVMLDSLDSATPVNSICSVQ 780
Query: 781 GTVVGVDESTAFSWPVCDMCGNGRLEQRPEDRGAFSCGDCSRVVTSPVLKRHLQVFLDCR 840
GTVVGVDESTAFSWPVCDMCGNGRLEQRPEDRGAFSCGDCSRVVTSPVLKRHLQVFLDCR
Sbjct: 781 GTVVGVDESTAFSWPVCDMCGNGRLEQRPEDRGAFSCGDCSRVVTSPVLKRHLQVFLDCR 840
Query: 841 SRPQCRVKVKLLQRSISSLLRFAAGEDGSYEVKSVLGKEVGLLNCFVQSVTAHPTSCIGL 900
SRPQCRVKVKLLQRSISSLLRFAAGEDGSYEVKSVLGKEVGLLNCFVQSVTAHPTSCIGL
Sbjct: 841 SRPQCRVKVKLLQRSISSLLRFAAGEDGSYEVKSVLGKEVGLLNCFVQSVTAHPTSCIGL 900
Query: 901 EEIELLSAGGASAEH 915
EEIELLSAGGASAEH
Sbjct: 901 EEIELLSAGGASAEH 915
>gi|239747093 PREDICTED: hypothetical protein XP_002344492 [Homo
sapiens]
Length = 272
Score = 340 bits (871), Expect = 5e-93
Identities = 169/172 (98%), Positives = 170/172 (98%), Gaps = 1/172 (0%)
Query: 4 GSRARGSKRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNP 63
GSR R S+RKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNP
Sbjct: 51 GSR-RESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNP 109
Query: 64 SLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDEL 123
SLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDEL
Sbjct: 110 SLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDEL 169
Query: 124 QFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPK 175
QFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPK
Sbjct: 170 QFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPK 221
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Query: 67 AEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFI 126
AE T K + P ++ G+ D+ L +EDK +L D+ +
Sbjct: 1538 AEPTYTTWKRARIFPMIFKKVRGLADKRGIVDLEGEEWQRRLEEEDKDYLKLTLDQEEAT 1597
Query: 127 DWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSS 186
+ ++S+ +SD E+ ++E S+ S S+E+ S P+ E S+
Sbjct: 1598 ESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESE----ST 1653
Query: 187 DSEKEDDLENVLL 199
+SE E +N++L
Sbjct: 1654 ESEGEKARKNIVL 1666
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 67 AEE--KTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQ 124
AEE + TE+ +LCP+ ++ + +S+ ++ + +E++ + + +E +
Sbjct: 221 AEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEE 280
Query: 125 FIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSEL-------PKPS 177
+ E + + E + +E E++E E + + S TS +K EL PKP
Sbjct: 281 EEEEEEEEEEEEEEE-EEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPE 339
Query: 178 SIEILEYSSDSEKEDD 193
I+E SD +K++D
Sbjct: 340 YSVIVEVRSDDDKDED 355
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 39.3 bits (90), Expect = 0.017
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Query: 89 TSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEG 148
+ S S +D + SS SD SD D + S D DS +++SD D
Sbjct: 547 SDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSD 606
Query: 149 AVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSES 204
+ + SD + + + SD SE S + SSDS D +N DS +
Sbjct: 607 SSDSSDSSDSSDSSDSKSDSSKSESDSSDS-DSKSDSSDSNSSDSSDNSDSSDSSN 661
Score = 37.0 bits (84), Expect = 0.084
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 145
+++ S ++S +D + SS GSD +++ S D D SD +++SD +E +
Sbjct: 831 DSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSN 890
Query: 146 DEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLEN 196
+ + S+ + S+ S S + S+ S SSD+ D N
Sbjct: 891 SSDSSDSSNSSDSDSSDSSNSSDS-SDSSNSSDSSESSNSSDNSNSSDSSN 940
Score = 36.6 bits (83), Expect = 0.11
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEI-----DSDRAEASDC 140
+++ S ++S +D + SS SD SD + S + E D + DS+ +++SD
Sbjct: 594 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDN 653
Query: 141 DEFEDDEGAVEISD-----------CASCASNQSLTSDEKLSELPKPSSIEILEYSSDSE 189
+ D + SD +S +SN S +SD S SS SDS
Sbjct: 654 SDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSS 713
Query: 190 KEDDLENVLLIDSES 204
D N DS+S
Sbjct: 714 DSSDSSNSNSSDSDS 728
Score = 36.2 bits (82), Expect = 0.14
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 84 KQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEF 143
K ++ KS S +D + SS+ SD SD + S DSD +++ D
Sbjct: 539 KSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSS-------DSDSSDSDSSDSS 591
Query: 144 EDDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDD 193
+ D S +S +S+ S +SD S K S + SSDS+ + D
Sbjct: 592 DSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSD 641
Score = 35.8 bits (81), Expect = 0.19
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 145
E++ S S +D + SS SD SD + + DS+ +++SD D
Sbjct: 925 ESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSD 984
Query: 146 DEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLEN 196
+ + SD +S +S+ S +SD S SS SSDS D N
Sbjct: 985 SSDSSDSSD-SSDSSDSSNSSDSSDSSDSSDSS-----NSSDSSNSSDSSN 1029
Score = 35.4 bits (80), Expect = 0.24
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 85 QETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 144
+ + +S S+ + + SS S+ SD D + S D D SD + +SD +
Sbjct: 700 ESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSS 759
Query: 145 DDEGAVEISDC--ASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDS 202
D + + SD +S +S+ S +SD S SS + S S D ++ DS
Sbjct: 760 DSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSS-DSSNSSDSSNSSDSSDSSDSSDS 818
Query: 203 ESPHKYHVQFASDA 216
+S + +SD+
Sbjct: 819 DSSNSSDSSNSSDS 832
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSD-EDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 144
+++ S +S +D + SS SD SD D + S + D SD +++SD +
Sbjct: 1047 DSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSS 1106
Query: 145 DDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDD 193
D + + SD +S +SN S +SD S SS SSDS + D
Sbjct: 1107 DSSDSSDSSD-SSDSSNSSDSSDSSDSSDSSDSSNS--SDSSDSSESSD 1152
Score = 35.0 bits (79), Expect = 0.32
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 145
+++ S ++S ++ + SS SD SD D + S + D SD +++SD + D
Sbjct: 793 DSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSD 852
Query: 146 DEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESP 205
+ S S +SN S +SD S SS + + + S D ++ DS+S
Sbjct: 853 SD-----SSNRSDSSNSSDSSDSSDSSNSSDSS-DSSDSNESSNSSDSSDSSNSSDSDSS 906
Query: 206 HKYHVQFASDA 216
+ +SD+
Sbjct: 907 DSSNSSDSSDS 917
Score = 34.3 bits (77), Expect = 0.55
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSD-EDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 144
+++ S ++S +D + SS+ SD SD D + S D D S+ ++++D
Sbjct: 733 DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSS 792
Query: 145 DDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDD 193
D + SD +S +S+ S +SD S+ S SSDS D
Sbjct: 793 DSSDSSNSSD-SSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSD 840
Score = 34.3 bits (77), Expect = 0.55
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSDE-DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 144
+++ S +S +D + SS SD SD D + S D D SD E+SD +
Sbjct: 1182 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSS 1241
Query: 145 DDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDD 193
D + SD + + + TSD + S SDS+ + +
Sbjct: 1242 DSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSE 1290
Score = 33.9 bits (76), Expect = 0.71
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 88 TTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDE 147
++ S S +D + SS+ SD SD + + D SD + +SD + D
Sbjct: 894 SSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSS--DNSNSSDSSNSSDSSDSSDSS 951
Query: 148 GAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDD 193
+ + S+ +S +SN S +SD S+ S+ SSDS D
Sbjct: 952 NSSDSSN-SSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSD 996
Score = 33.5 bits (75), Expect = 0.93
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 87 TTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDD 146
++ S +S +D + SS SD SD D S + D D SD + +SD + D
Sbjct: 829 SSDSSDSSNSSDSSDSSDSSDGSDSD---SSNRSDSSNSSDSSDSSDSSNSSDSSDSSDS 885
Query: 147 EGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDD 193
+ SD +S+ S +SD S+ S SSDS + +
Sbjct: 886 NESSNSSD----SSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSN 928
Score = 33.5 bits (75), Expect = 0.93
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Query: 54 EGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDK 113
+G + S N S ++ ++ +++ S +S +D SS S+ SD D
Sbjct: 849 DGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSD---SSDSSNSSDSDS 905
Query: 114 TLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSEL 173
+ S D + S+ + +SD D + + SD +S +SN S +S+ S
Sbjct: 906 SDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSD-SSDSSNSSDSSNSSDSSN 964
Query: 174 PKPSSIEILEYSSDSEKEDD 193
SS SSDS D
Sbjct: 965 SSDSSDSNSSDSSDSSNSSD 984
Score = 32.3 bits (72), Expect = 2.1
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 87 TTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDD 146
++ S +S +D + SS S+ SD + E DSD +++SD
Sbjct: 665 SSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSS 724
Query: 147 EGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDD 193
+ S +S +SN S +SD S SS SSDS D
Sbjct: 725 DSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSS-----DSSDSSNSSD 766
Score = 32.0 bits (71), Expect = 2.7
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 145
+++ S +S +D + SS SD SD + S D DSD + +SD + +
Sbjct: 682 DSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSN--SNSSDSDSSNSSDSSDSSN 739
Query: 146 DEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLEN 196
+ + SD +SN S +SD S SS SSDS D N
Sbjct: 740 SSDSSDSSD----SSNSSDSSDSSDSSNSSDSS-----DSSDSSDSSDSSN 781
Score = 31.6 bits (70), Expect = 3.5
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 86 ETTTSKSTSGLTDITWSSSGSDLSDE-DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 144
+++ S ++S +D + SS SD S D + S D + SD +++SD D
Sbjct: 655 DSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDS-S 713
Query: 145 DDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLEN 196
D + + S +SN S +SD S SS SSDS D N
Sbjct: 714 DSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDS--SNSSDSSDSSDSSN 763
>gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens]
Length = 1531
Score = 36.6 bits (83), Expect = 0.11
Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 57 QNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTS--------GLTDITWSSSGSDL 108
+NT G+P E ++ LE + + T T K T+ G WS S SD
Sbjct: 1242 ENTEGSPQEDGVELEGLKQRLEKKQKREPGTKTKKQTTLAFKPIKKGKKRNPWSDSESDR 1301
Query: 109 SDEDKTLSQLQRD--------ELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCAS 160
S ++ R+ + +F ++DSD + SD DE DDE V S AS
Sbjct: 1302 SSDESNFDVPPRETEPRRAATKTKF-TMDLDSDE-DFSDFDEKTDDEDFV-----PSDAS 1354
Query: 161 NQSLTSDEKLS--ELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQ 218
+ KLS EL S+ SD E +D +V L S SP H ++
Sbjct: 1355 PPKTKTSPKLSNKELKPQKSV-----VSDLEADDVKGSVPL--SSSPPATHFPDETE--- 1404
Query: 219 IMERLIDPRTKSTETILHTPQKPT-------AKFPRTPENSAKKKLLRGGLAERLNGLQN 271
+ +P K T+ T K AK P+ + + L G++++ + +
Sbjct: 1405 ----ITNPVPKKNVTVKKTAAKSQSSTSTTGAKKRAAPKGTKRDPALNSGVSQKPDPAKT 1460
Query: 272 RER 274
+ R
Sbjct: 1461 KNR 1463
>gi|31317270 WD repeat and FYVE domain containing 3 isoform 3 [Homo
sapiens]
Length = 281
Score = 36.6 bits (83), Expect = 0.11
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 783 VVGVDESTAFSWPVCDMCGNGRLEQRPEDRGAFSCGDCSRVVTSPVLKRHL-----QVFL 837
+VG FSW V D G + +D G SC CS V S +RH Q+F
Sbjct: 181 LVGDSRGRVFSWSVSDQPGRSAADHWVKDEGGDSCSGCS-VRFSLTERRHHCRNCGQLFC 239
Query: 838 DCRSRPQCRVKVKLLQRSISSLLRFAAGEDGSYEVKSVLGKEVGLLNC 885
SR Q +K + ISS +R ++ Y ++ G E G NC
Sbjct: 240 QKCSRFQSEIK----RLKISSPVRVC--QNCYYNLQHERGSEDGPRNC 281
>gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Homo
sapiens]
Length = 3526
Score = 36.6 bits (83), Expect = 0.11
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 783 VVGVDESTAFSWPVCDMCGNGRLEQRPEDRGAFSCGDCSRVVTSPVLKRHL-----QVFL 837
+VG FSW V D G + +D G SC CS V S +RH Q+F
Sbjct: 3426 LVGDSRGRVFSWSVSDQPGRSAADHWVKDEGGDSCSGCS-VRFSLTERRHHCRNCGQLFC 3484
Query: 838 DCRSRPQCRVKVKLLQRSISSLLRFAAGEDGSYEVKSVLGKEVGLLNC 885
SR Q +K + ISS +R ++ Y ++ G E G NC
Sbjct: 3485 QKCSRFQSEIK----RLKISSPVRVC--QNCYYNLQHERGSEDGPRNC 3526
>gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo sapiens]
Length = 1863
Score = 35.8 bits (81), Expect = 0.19
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 91 KSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAV 150
K + L+ T S SDL + +++R + D + + D+ + SDC + E
Sbjct: 889 KKHAHLSQTTLSGGQSDLGYNSLSKDEVRRGDTSTEDIQEEKDK-KGSDCSSLSESESTK 947
Query: 151 EISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHV 210
+DC S Q+ +S +L+ S+ +I S +S E +LLI S +
Sbjct: 948 GSADCLPKLSYQNSSSIVRLTGTSNNSAGKISGESMESTPE-----LLLISS-------L 995
Query: 211 QFASDARQIMERLIDPRTKS 230
+ ++ R I R R KS
Sbjct: 996 EDTNETRNIQSRCFRKRHKS 1015
>gi|120953251 neuron navigator 3 [Homo sapiens]
Length = 2363
Score = 35.8 bits (81), Expect = 0.19
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 21/167 (12%)
Query: 81 PRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDC 140
P+P + T K T S GS S E + + Q + I ++A AS C
Sbjct: 528 PKPGSKVPTVKQTI--------SPGSTASKESEKFRTTKGSPSQSLSKPITMEKASASSC 579
Query: 141 DEFEDDEGAVEISDCASCASNQSLTSDEKLS----ELPK------PSSIEILEYSSDSEK 190
+ A + S SC + +S + +LP+ P++ + + +
Sbjct: 580 PAPLEGREAGQASPSGSCTMTVAQSSGQSTGNGAVQLPQQQQHSHPNTATVAPFIYRAHS 639
Query: 191 EDDLENVLLIDS-ESPHKYHVQFASDARQIMERLI--DPRTKSTETI 234
E++ + DS SP K + ++ A+Q +E + DP T+ T+
Sbjct: 640 ENEGTALPSADSCTSPTKMDLSYSKTAKQCLEEISGEDPETRRMRTV 686
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 3469 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 3525
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 3526 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 3576
>gi|5032295 dystrophin Dp116 isoform [Homo sapiens]
Length = 956
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 748 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 804
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 805 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 855
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 2133 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 2189
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 2190 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 2240
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 2136 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 2192
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 2193 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 2243
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 3354 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 3410
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 3411 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 3461
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 3473 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 3529
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 3530 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 3580
>gi|5032311 dystrophin Dp140ab isoform [Homo sapiens]
Length = 1230
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 1004 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 1060
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 1061 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 1111
>gi|5032309 dystrophin Dp140b isoform [Homo sapiens]
Length = 1243
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 1017 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 1073
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 1074 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 1124
>gi|5032303 dystrophin Dp71ab isoform [Homo sapiens]
Length = 622
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 396 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 452
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 453 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 503
>gi|5032301 dystrophin Dp71a isoform [Homo sapiens]
Length = 604
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 396 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 452
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 453 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 503
>gi|5032299 dystrophin Dp71b isoform [Homo sapiens]
Length = 635
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 409 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 465
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 466 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 516
>gi|5032297 dystrophin Dp71 isoform [Homo sapiens]
Length = 617
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 409 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 465
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 466 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 516
>gi|5032293 dystrophin Dp140 isoform [Homo sapiens]
Length = 1225
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 1017 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 1073
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 1074 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 1124
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 3354 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 3410
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 3411 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 3461
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 162 QSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQIME 221
QSL D LS+ P+ I I S +SE+ +LE +L E ++ +Q
Sbjct: 3477 QSLNQDSPLSQPRSPAQILI---SLESEERGELERILADLEEENRNLQAEYDRLKQQHEH 3533
Query: 222 RLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLR---GGLAERLNGLQNRER 274
+ + P E + +PQ PR E A+ KLLR G L R+ L++ +
Sbjct: 3534 KGLSPLPSPPEMMPTSPQS-----PRDAELIAEAKLLRQHKGRLEARMQILEDHNK 3584
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 35.4 bits (80), Expect = 0.24
Identities = 49/171 (28%), Positives = 68/171 (39%), Gaps = 29/171 (16%)
Query: 103 SSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAV-----------E 151
S SD ED Q+ E + + R +ASD + E + + +
Sbjct: 167 SPASDSETEDALKPQISDSESE------EPPRHQASDSENEEPPKPRMSDSESEELPKPQ 220
Query: 152 ISDCASCASNQSLTSDEKLSELPKP------SSIEILEYSSDSEKEDDLENVLLIDSESP 205
+SD S + SD + ELPKP S +SDSE E +L + DSES
Sbjct: 221 VSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENE-ELPKPRISDSESE 279
Query: 206 HKYHVQFASDARQIMERLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKK 256
Q ASD+ E L PR +E+ PQK A T + S K+
Sbjct: 280 DPPRNQ-ASDSEN--EELPKPRVSDSES--EGPQKGPASDSETEDASRHKQ 325
>gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo sapiens]
Length = 1906
Score = 33.5 bits (75), Expect = 0.93
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 87 TTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDD 146
T ST G +D+ ++S D +++R + D + + D+ + SDC +
Sbjct: 937 TDDRSSTGGQSDLGYNSLSKD---------EVRRGDTSTEDIQEEKDK-KGSDCSSLSES 986
Query: 147 EGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPH 206
E +DC S Q+ +S +L+ S+ +I S +S E +LLI S
Sbjct: 987 ESTKGSADCLPKLSYQNSSSIVRLTGTSNNSAGKISGESMESTPE-----LLLISS---- 1037
Query: 207 KYHVQFASDARQIMERLIDPRTKS 230
++ ++ R I R R KS
Sbjct: 1038 ---LEDTNETRNIQSRCFRKRHKS 1058
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 33.5 bits (75), Expect = 0.93
Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Query: 7 ARGSKRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNT---SGNP 63
A+G+ + S N + P PGE +Q + +++ + GE ++ +G P
Sbjct: 2279 AQGASQDSSSNQQDPGEPGEAEVQEEDHDV----TQTEVADGDIMDGEAETDSVVIAGQP 2334
Query: 64 SLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDEL 123
+ + ++ E LE E SG + I S SG D S ED + + +
Sbjct: 2335 EVLSSQEMQVENELE---DLIDELLERDGGSGNSTIIVSRSGEDESQEDVLMDEAPSNLS 2391
Query: 124 QFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIEILE 183
Q + ++R ++ + + ED+E + D + ++ + DE+ E + +
Sbjct: 2392 QAS--TLQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDD 2449
Query: 184 YSSDSEKEDD 193
+ +++DD
Sbjct: 2450 EGEEGDEDDD 2459
>gi|155030242 WD repeat domain 60 [Homo sapiens]
Length = 1066
Score = 33.5 bits (75), Expect = 0.93
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 122 ELQFIDWEIDSDRAEA--SDC-DEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKPSS 178
E++ + ++++ RA+A + C D+FED E E+ D S+ S EKL ELP
Sbjct: 354 EIEKEETDLENARADAYTASCEDDFEDYEDDFEVCDGDDDESSNEPESREKLEELPLAQK 413
Query: 179 IEILEYSSDSEKEDD 193
EI E E++
Sbjct: 414 KEIQEIQRAINAENE 428
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 32.7 bits (73), Expect = 1.6
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 145 DDEGAVEISDCASCASNQSLTSDEKLSELPKPSSIE---ILEYSSDSEKEDDLEN 196
++ G V++ + C S ++L+SD++L +L + S+E IL + E+E++ EN
Sbjct: 1819 NESGFVDMCSLSVCDSKRNLSSDQQLIDLLENKSLESKLILSQNHSDEEEEEEEN 1873
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,986,641
Number of Sequences: 37866
Number of extensions: 1844664
Number of successful extensions: 5908
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 5818
Number of HSP's gapped (non-prelim): 127
length of query: 915
length of database: 18,247,518
effective HSP length: 111
effective length of query: 804
effective length of database: 14,044,392
effective search space: 11291691168
effective search space used: 11291691168
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.