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Search of human proteins with 145301543
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145301543 ubiquitin-conjugating enzyme E2W (putative)
isoform 2 [Homo sapiens]
(151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145301543 ubiquitin-conjugating enzyme E2W (putative) isoform... 322 1e-88
gi|47933381 ubiquitin-conjugating enzyme E2W (putative) isoform ... 313 4e-86
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 92 2e-19
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 92 2e-19
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 90 6e-19
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 89 1e-18
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 87 7e-18
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 84 6e-17
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 81 3e-16
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 78 2e-15
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 78 3e-15
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 3e-15
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 3e-15
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 3e-15
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 3e-15
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 3e-15
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 3e-15
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 78 3e-15
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 77 4e-15
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 77 4e-15
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 77 6e-15
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 77 6e-15
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s... 72 2e-13
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens] 69 1e-12
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens] 69 2e-12
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 68 3e-12
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 68 3e-12
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s... 67 6e-12
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 67 8e-12
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 65 2e-11
>gi|145301543 ubiquitin-conjugating enzyme E2W (putative) isoform 2
[Homo sapiens]
Length = 151
Score = 322 bits (824), Expect = 1e-88
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF
Sbjct: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCK 120
SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCK
Sbjct: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCK 120
Query: 121 EKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 151
EKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC
Sbjct: 121 EKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 151
>gi|47933381 ubiquitin-conjugating enzyme E2W (putative) isoform 1
[Homo sapiens]
Length = 162
Score = 313 bits (802), Expect = 4e-86
Identities = 151/162 (93%), Positives = 151/162 (93%), Gaps = 11/162 (6%)
Query: 1 MASMQ-----------KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY 49
MASMQ KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY
Sbjct: 1 MASMQTTGRRVEVWFPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY 60
Query: 50 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC 109
EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC
Sbjct: 61 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC 120
Query: 110 LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 151
LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC
Sbjct: 121 LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 162
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 92.0 bits (227), Expect = 2e-19
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
+++ KR+QKEL + DPPP + K ++I +W + G PG++YEG F L F
Sbjct: 59 LSTSAKRIQKELAEITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITF 116
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 119
SS YPF P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 117 SSDYPFKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 173
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 92.0 bits (227), Expect = 2e-19
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
+++ KR+QKEL + DPPP + K ++I +W + G PG++YEG F L F
Sbjct: 59 LSTSAKRIQKELAEITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITF 116
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 119
SS YPF P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 117 SSDYPFKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 173
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 90.1 bits (222), Expect = 6e-19
Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
+++ KR+QKEL + DPPP + K ++I +W + G PG++YEG F L F
Sbjct: 53 LSTSAKRIQKELAEITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITF 110
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 119
S YPF P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 111 SPDYPFKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 167
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 89.4 bits (220), Expect = 1e-18
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
+++ KR+QKEL + DPPP + K ++I +W + G PG++YEG F L F
Sbjct: 45 LSTSAKRIQKELADITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITF 102
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 119
+ YPF P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 103 TPEYPFKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 159
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 86.7 bits (213), Expect = 7e-18
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+QKEL LQ DPP + V + + W + G P + Y+G F L F + YP
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGP--VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P++ FT + HP++ SNG ICL IL WSPAL+V V LSI S+L
Sbjct: 62 FKPPKIAFTTKIY--HPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 83.6 bits (205), Expect = 6e-17
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+QKEL LQ DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRIQKELTDLQRDPPAQCSAGP--VGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT + HP++ SNG ICL IL WSPAL+V V LSI S+L
Sbjct: 62 FKPPKVAFTTKIY--HPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 81.3 bits (199), Expect = 3e-16
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 5 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRY 64
++RL ++ LQ DPP G++ +N+I QW + G GT +E F+L+ +FS Y
Sbjct: 6 RRRLMRDFKRLQEDPPVGVS--GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEY 63
Query: 65 PFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRR 124
P P V F + HP+VY++G ICL IL WSP V S+ SI S+L +
Sbjct: 64 PNKPPTVRFLSKMF--HPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLD--EPNPN 119
Query: 125 PPDNSFYVRTCNKNPKK 141
P NS + +N ++
Sbjct: 120 SPANSQAAQLYQENKRE 136
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 78.2 bits (191), Expect = 2e-15
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
M S +K L KEL L DPP + V + + W + G + Y+G F L F
Sbjct: 1 MLSNRKCLSKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHF 58
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
+ YPF P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 59 PTDYPFKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 112
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.4 bits (189), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRIHKELNDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 77.4 bits (189), Expect = 4e-15
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 5 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRY 64
++RL ++ LQ DPP G++ +N+I W + G GT +E F+L +F+ Y
Sbjct: 6 RRRLMRDFKRLQEDPPAGVS--GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEY 63
Query: 65 PFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRR 124
P P V F + HP+VY++G ICL IL WSP V S+ SI S+L +
Sbjct: 64 PNKPPTVRFVSKMF--HPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLD--EPNPN 119
Query: 125 PPDNSFYVRTCNKNPKK 141
P NS + +N ++
Sbjct: 120 SPANSQAAQLYQENKRE 136
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 77.0 bits (188), Expect = 6e-15
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KRLQ+EL+ L G++ +S +++ +W+ + GA GT+YE +++L +F S YP
Sbjct: 33 KRLQQELMTLMMSGDKGISAFPES--DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 90
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
+++P V F HP+V + G+ICL IL E WS V+++ LSI S+L
Sbjct: 91 YNAPTVKFL--TPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLL 139
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 77.0 bits (188), Expect = 6e-15
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 16/130 (12%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
M S QK L EL +LQ +P G + ++ + W V + G P TLYEG F+ KF
Sbjct: 6 MTSSQKALMLELKSLQEEPVEGFRITLVD-ESDLYNWEVAIFGPPNTLYEGGYFKAHIKF 64
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSIL-------------TEDWSPALSVQS 107
YP+ P F + HP++Y NG +C+SIL +E W+P +V++
Sbjct: 65 PIDYPYSPPTFRFLTK--MWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRT 122
Query: 108 VCLSIISMLS 117
+ LS+IS+L+
Sbjct: 123 ILLSVISLLN 132
>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
sapiens]
Length = 176
Score = 72.0 bits (175), Expect = 2e-13
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 32 NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHIC 91
++I +W + G PG++YEG F L F+ YPF P+V F H ++ S G IC
Sbjct: 57 DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIY--HCNINSQGVIC 114
Query: 92 LSILTEDWSPALSVQSVCLSIISMLSSC 119
L IL ++WSPAL++ V LSI S+L+ C
Sbjct: 115 LDILKDNWSPALTISKVLLSICSLLTDC 142
>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
Length = 236
Score = 69.3 bits (168), Expect = 1e-12
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 3 SMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSS 62
S QK L EL LQ +P G + + + W V + G P T YEG F+ KF
Sbjct: 8 SSQKALLLELKGLQEEPVEGFRVTLVD-EGDLYNWEVAIFGPPNTYYEGGYFKARLKFPI 66
Query: 63 RYPFDSPQVMFTGENIPVHPHVYSNGHICLSIL-------------TEDWSPALSVQSVC 109
YP+ P F + HP++Y G +C+SIL +E W+P +V+++
Sbjct: 67 DYPYSPPAFRFLTK--MWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTIL 124
Query: 110 LSIISMLS 117
LS+IS+L+
Sbjct: 125 LSVISLLN 132
>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
Length = 354
Score = 68.9 bits (167), Expect = 2e-12
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 17/140 (12%)
Query: 7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPF 66
R++++++++ +PPPGM + +V +T+ + G T YEG F +F+ YP
Sbjct: 103 RIKRDIMSIYKEPPPGMFVVPDTVD--MTKIHALITGPFDTPYEGGFFLFVFRCPPDYPI 160
Query: 67 DSPQV--MFTGEN-IPVHPHVYSNGHICLSIL----TEDWSPALSVQSVCLSIISMLS-- 117
P+V M TG N + +P+ Y NG +CLSIL WSPA S+ SV +SI S+++
Sbjct: 161 HPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTEN 220
Query: 118 ------SCKEKRRPPDNSFY 131
+++R P D+ Y
Sbjct: 221 PYHNEPGFEQERHPGDSKNY 240
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 67.8 bits (164), Expect = 3e-12
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 32 NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHIC 91
+++ +W+ + GA GT+YE +++L +F S YP+++P V F HP+V + G+IC
Sbjct: 18 DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFL--TPCYHPNVDTQGNIC 75
Query: 92 LSILTEDWSPALSVQSVCLSIISML 116
L IL E WS V+++ LSI S+L
Sbjct: 76 LDILKEKWSALYDVRTILLSIQSLL 100
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 67.8 bits (164), Expect = 3e-12
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 32 NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHIC 91
+++ +W+ + GA GT+YE +++L +F S YP+++P V F HP+V + G+IC
Sbjct: 18 DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFL--TPCYHPNVDTQGNIC 75
Query: 92 LSILTEDWSPALSVQSVCLSIISML 116
L IL E WS V+++ LSI S+L
Sbjct: 76 LDILKEKWSALYDVRTILLSIQSLL 100
>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
sapiens]
Length = 165
Score = 67.0 bits (162), Expect = 6e-12
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 65
KRL E L +PP G+ + +N +W + G T +E F + F YP
Sbjct: 7 KRLMAEYKQLTLNPPEGIVAGPMNEENFF-EWEALIMGPEDTCFEFGVFPAILSFPLDYP 65
Query: 66 FDSPQVMFTGENIPVHPHVYSNGHICLSIL-------------TEDWSPALSVQSVCLSI 112
P++ FT E HP++Y +G +C+SIL E WSP SV+ + LS+
Sbjct: 66 LSPPKMRFTCEMF--HPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSV 123
Query: 113 ISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHD 148
+SML+ P D S N +K W D
Sbjct: 124 VSMLA------EPNDES------GANVDASKMWRDD 147
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 66.6 bits (161), Expect = 8e-12
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 37 WIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILT 96
W + G + Y+G F L F + YPF P+V FT HP++ SNG ICL IL
Sbjct: 4 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY--HPNINSNGSICLDILR 61
Query: 97 EDWSPALSVQSVCLSIISML 116
WSPAL++ V LSI S+L
Sbjct: 62 SQWSPALTISKVLLSICSLL 81
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 65.5 bits (158), Expect = 2e-11
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 1 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKF 60
MA + +R+ KE L +P PG + + +++ + V + G + +EG F+L
Sbjct: 1 MAGLPRRIIKETQRLLAEPVPG--IKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFL 58
Query: 61 SSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSS 118
YP +P+V F + HP+V G ICL IL + WSPAL +++V LSI ++LS+
Sbjct: 59 PEEYPMAAPKVRFMTKIY--HPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,979,554
Number of Sequences: 37866
Number of extensions: 290809
Number of successful extensions: 847
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 711
Number of HSP's gapped (non-prelim): 87
length of query: 151
length of database: 18,247,518
effective HSP length: 93
effective length of query: 58
effective length of database: 14,725,980
effective search space: 854106840
effective search space used: 854106840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.