Guide to the Human Genome
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Name: SYT14 Sequence: fasta or formatted (555aa) NCBI GI: 144226225
Description:

synaptotagmin XIV isoform 4

Referenced in:

ER, Golgi, and the Secretory Pathway
Synapses

Other entries for this name:
alt prot [619aa] synaptotagmin XIV isoform 1
alt prot [574aa] synaptotagmin XIV isoform 3
alt prot [600aa] synaptotagmin XIV isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         21           2
 C cysteine            2.7         15           1
 D aspartate           4.0         22           2
 E glutamate           8.5         47           3
 F phenylalanine       3.4         19           1
 G glycine             6.7         37           2
 H histidine           2.9         16           1
 I isoleucine          4.5         25           2
 K lysine              6.3         35           2
 L leucine             8.6         48           3
 M methionine          2.7         15           1
 N asparagine          4.5         25           1
 P proline             5.4         30           3
 Q glutamine           4.0         22           2
 R arginine            4.5         25           2
 S serine             12.1         67           3
 T threonine           5.0         28           2
 V valine              5.4         30           1
 W tryptophan          0.9          5           1
 Y tyrosine            4.1         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synaptotagmin XIV isoform 4 
SYT14                 0.990   synaptotagmin XIV isoform 3 
SYT14                 0.963   synaptotagmin XIV isoform 2 
SYT14                 0.952   synaptotagmin XIV isoform 1 
SYT16                 0.371   synaptotagmin XIV-like 
SYT1                  0.088   synaptotagmin I 
SYT1                  0.088   synaptotagmin I 
SYT1                  0.088   synaptotagmin I 
SYT10                 0.081   synaptotagmin X 
SYT2                  0.078   synaptotagmin II 
SYT2                  0.078   synaptotagmin II 
SYT4                  0.077   synaptotagmin IV 
SYT11                 0.074   synaptotagmin XI 
RPH3A                 0.072   rabphilin 3A homolog isoform 1 
RPH3A                 0.072   rabphilin 3A homolog isoform 2 
SYT6                  0.072   synaptotagmin VI 
SYT7                  0.071   synaptotagmin VII 
SYT3                  0.068   synaptotagmin III 
SYT3                  0.068   synaptotagmin III 
SYT3                  0.068   synaptotagmin III 
SYT5                  0.067   synaptotagmin V 
SYT9                  0.062   synaptotagmin IX 
DOC2B                 0.060   double C2-like domains, beta 
SYT17                 0.057   B/K protein 
SYT12                 0.057   synaptotagmin XII 
DOC2A                 0.052   double C2-like domains, alpha 
SYT15                 0.052   synaptotagmin XV isoform a 
LOC390213             0.051   PREDICTED: hypothetical protein LOC390213 
SYT8                  0.049   synaptotagmin VIII 
LOC390213             0.039   PREDICTED: similar to hCG21066 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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