Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SYT14 Sequence: fasta or formatted (574aa) NCBI GI: 226342957
Description:

synaptotagmin XIV isoform 3

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [555aa] synaptotagmin XIV isoform 4
alt prot [619aa] synaptotagmin XIV isoform 1
alt prot [600aa] synaptotagmin XIV isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         21           2
 C cysteine            3.0         17           2
 D aspartate           4.0         23           2
 E glutamate           8.2         47           3
 F phenylalanine       3.5         20           1
 G glycine             7.0         40           2
 H histidine           3.0         17           1
 I isoleucine          4.9         28           2
 K lysine              6.3         36           2
 L leucine             8.9         51           3
 M methionine          2.6         15           1
 N asparagine          4.4         25           1
 P proline             5.2         30           3
 Q glutamine           4.0         23           2
 R arginine            4.5         26           2
 S serine             11.7         67           3
 T threonine           4.9         28           2
 V valine              5.4         31           1
 W tryptophan          0.9          5           1
 Y tyrosine            4.2         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synaptotagmin XIV isoform 3 
SYT14                 0.963   synaptotagmin XIV isoform 1 
SYT14                 0.955   synaptotagmin XIV isoform 4 
SYT14                 0.918   synaptotagmin XIV isoform 2 
SYT16                 0.349   synaptotagmin XIV-like 
SYT1                  0.080   synaptotagmin I 
SYT1                  0.080   synaptotagmin I 
SYT1                  0.080   synaptotagmin I 
SYT10                 0.070   synaptotagmin X 
SYT2                  0.070   synaptotagmin II 
SYT2                  0.070   synaptotagmin II 
SYT4                  0.070   synaptotagmin IV 
SYT11                 0.064   synaptotagmin XI 
SYT7                  0.064   synaptotagmin VII 
SYT6                  0.063   synaptotagmin VI 
RPH3A                 0.063   rabphilin 3A homolog isoform 1 
RPH3A                 0.063   rabphilin 3A homolog isoform 2 
SYT3                  0.059   synaptotagmin III 
SYT3                  0.059   synaptotagmin III 
SYT3                  0.059   synaptotagmin III 
SYT5                  0.059   synaptotagmin V 
SYT9                  0.052   synaptotagmin IX 
SYT12                 0.051   synaptotagmin XII 
DOC2B                 0.050   double C2-like domains, beta 
SYT17                 0.049   B/K protein 
DOC2A                 0.045   double C2-like domains, alpha 
SYT15                 0.044   synaptotagmin XV isoform a 
SYT8                  0.042   synaptotagmin VIII 
LOC390213             0.041   PREDICTED: hypothetical protein LOC390213 
SYT13                 0.030   synaptotagmin XIII 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press