Guide to the Human Genome
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Search of human proteins with 14249158

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
         (670 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14249158 hepatoma-derived growth factor-related protein 2 iso...  1325   0.0  
gi|48255931 hepatoma-derived growth factor-related protein 2 iso...  1321   0.0  
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo...   208   1e-53
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ...   208   1e-53
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo...   203   5e-52
gi|7705320 hepatoma-derived growth factor, related protein 3 [Ho...   200   4e-51
gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens]    167   2e-41
gi|110681712 hepatoma derived growth factor-like 1 [Homo sapiens]     147   2e-35
gi|186928819 hepatoma-derived growth factor isoform b [Homo sapi...   129   1e-29
gi|186928821 hepatoma-derived growth factor isoform c [Homo sapi...   127   3e-29
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    95   2e-19
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    91   5e-18
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi...    85   2e-16
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]        85   2e-16
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        84   4e-16
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     83   9e-16
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ...    83   9e-16
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [...    83   9e-16
gi|38788333 remodeling and spacing factor 1 [Homo sapiens]             82   1e-15
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    82   2e-15
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    81   3e-15
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            81   4e-15
gi|217330641 IWS1 homolog [Homo sapiens]                               80   8e-15
gi|148746195 trichohyalin [Homo sapiens]                               79   1e-14
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]    78   2e-14
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]    78   2e-14
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                77   7e-14
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             76   1e-13
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          75   1e-13
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]            74   3e-13

>gi|14249158 hepatoma-derived growth factor-related protein 2
           isoform 2 [Homo sapiens]
          Length = 670

 Score = 1325 bits (3430), Expect = 0.0
 Identities = 670/670 (100%), Positives = 670/670 (100%)

Query: 1   MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP 60
           MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
Sbjct: 1   MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP 60

Query: 61  YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
           YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD
Sbjct: 61  YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120

Query: 121 EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA 180
           EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA
Sbjct: 121 EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA 180

Query: 181 SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240
           SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS
Sbjct: 181 SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240

Query: 241 DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSS 300
           DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSS
Sbjct: 241 DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSS 300

Query: 301 SSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRG 360
           SSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRG
Sbjct: 301 SSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRG 360

Query: 361 EAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSS 420
           EAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSS
Sbjct: 361 EAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSS 420

Query: 421 TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480
           TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS
Sbjct: 421 TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480

Query: 481 EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA 540
           EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA
Sbjct: 481 EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA 540

Query: 541 EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSA 600
           EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSA
Sbjct: 541 EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSA 600

Query: 601 PVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERAR 660
           PVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERAR
Sbjct: 601 PVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERAR 660

Query: 661 GDSEALDEES 670
           GDSEALDEES
Sbjct: 661 GDSEALDEES 670


>gi|48255931 hepatoma-derived growth factor-related protein 2
           isoform 1 [Homo sapiens]
          Length = 671

 Score = 1321 bits (3418), Expect = 0.0
 Identities = 670/671 (99%), Positives = 670/671 (99%), Gaps = 1/671 (0%)

Query: 1   MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP 60
           MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
Sbjct: 1   MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP 60

Query: 61  YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
           YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD
Sbjct: 61  YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120

Query: 121 EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA 180
           EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA
Sbjct: 121 EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA 180

Query: 181 SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240
           SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS
Sbjct: 181 SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240

Query: 241 DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSS 300
           DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSS
Sbjct: 241 DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSS 300

Query: 301 SSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRG 360
           SSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRG
Sbjct: 301 SSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRG 360

Query: 361 EAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSS 420
           EAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSS
Sbjct: 361 EAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSS 420

Query: 421 TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480
           TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS
Sbjct: 421 TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480

Query: 481 EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA 540
           EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA
Sbjct: 481 EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA 540

Query: 541 EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSA 600
           EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSA
Sbjct: 541 EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSA 600

Query: 601 PVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHD-VREGPDLDRPGSDRQERERA 659
           PVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHD VREGPDLDRPGSDRQERERA
Sbjct: 601 PVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDSVREGPDLDRPGSDRQERERA 660

Query: 660 RGDSEALDEES 670
           RGDSEALDEES
Sbjct: 661 RGDSEALDEES 671


>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
           sapiens]
          Length = 530

 Score =  208 bits (529), Expect = 1e-53
 Identities = 183/677 (27%), Positives = 293/677 (43%), Gaps = 165/677 (24%)

Query: 1   MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP 60
           M   FKPGDL+FAKMKGYPHWPAR+D++ DGAVKPP NK PIFFFGTHETAFLGPKD+FP
Sbjct: 1   MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP 60

Query: 61  YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
           Y + K+KYGKPNKRKGFNEGLWEI NNP   +      SS  +   ++N +  SD + ++
Sbjct: 61  YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKF------SSQQAATKQSNAS--SDVEVEE 112

Query: 121 EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA 180
           ++  V               + D+D ++ + N  + +         ++R RK  ++  Q 
Sbjct: 113 KETSV--------------SKEDTDHEEKASNEDVTKAVDITTPKAARRGRKRKAE-KQV 157

Query: 181 SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240
               +    + ++S + K S +   P   AA       P G  K  K P  S+SD   + 
Sbjct: 158 ETEEAGVVTTATASVNLKVSPKRGRP---AATEVKIPKPRGRPKMVKQPCPSESDIITEE 214

Query: 241 DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE----- 295
           D              S              KK   G+K  +KP  +P  ++ K E     
Sbjct: 215 D-------------KSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKR 261

Query: 296 ----RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKE 351
               +   +S+SDS+ +  D+  E KR+     R  +   RR   +      + EKE  +
Sbjct: 262 KNLAKTGVTSTSDSEEEGDDQEGEKKRKG---GRNFQTAHRRNMLK-----GQHEKEAAD 313

Query: 352 RRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKK 411
           R+R++ ++ E E+ +                    K  G+ P              E KK
Sbjct: 314 RKRKQEEQMETEQQN--------------------KDEGKKP--------------EVKK 339

Query: 412 SAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKE-PS 470
             KK ++S          + +R+  E K   K           +   ++R +E   E  S
Sbjct: 340 VEKKRETSM-------DSRLQRIHAEIKNSLK----------IDNLDVNRCIEALDELAS 382

Query: 471 VEEKLQKL--HSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRR 528
           ++  +Q+   H+E+              +  L+++   +V+  I++K+T           
Sbjct: 383 LQVTMQQAQKHTEM--------------ITTLKKIRRFKVSQVIMEKST----------- 417

Query: 529 YKANKDVMEKAAEVYTRLKSRVLGPKIEAV--QKVNKAGMEKEKAEEKLAGEELAGEEAP 586
                        +Y + K+  L  + ++V  Q +NK+  E+ + EE    ++  G++ P
Sbjct: 418 ------------MLYNKFKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKD-QGKKGP 464

Query: 587 QEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDL 646
            +K E + +   S  +NG + +Q G   +                 S+ED  D  E    
Sbjct: 465 NKKLEKEQTG--SKTLNGGSDAQDGNQPQHNGE-------------SNEDSKDNHEASTK 509

Query: 647 DRPGSDRQERERARGDS 663
            +P S+ +E E +  DS
Sbjct: 510 KKPSSEERETEISLKDS 526


>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
           sapiens]
          Length = 530

 Score =  208 bits (529), Expect = 1e-53
 Identities = 183/677 (27%), Positives = 293/677 (43%), Gaps = 165/677 (24%)

Query: 1   MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP 60
           M   FKPGDL+FAKMKGYPHWPAR+D++ DGAVKPP NK PIFFFGTHETAFLGPKD+FP
Sbjct: 1   MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP 60

Query: 61  YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
           Y + K+KYGKPNKRKGFNEGLWEI NNP   +      SS  +   ++N +  SD + ++
Sbjct: 61  YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKF------SSQQAATKQSNAS--SDVEVEE 112

Query: 121 EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA 180
           ++  V               + D+D ++ + N  + +         ++R RK  ++  Q 
Sbjct: 113 KETSV--------------SKEDTDHEEKASNEDVTKAVDITTPKAARRGRKRKAE-KQV 157

Query: 181 SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240
               +    + ++S + K S +   P   AA       P G  K  K P  S+SD   + 
Sbjct: 158 ETEEAGVVTTATASVNLKVSPKRGRP---AATEVKIPKPRGRPKMVKQPCPSESDIITEE 214

Query: 241 DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE----- 295
           D              S              KK   G+K  +KP  +P  ++ K E     
Sbjct: 215 D-------------KSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKR 261

Query: 296 ----RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKE 351
               +   +S+SDS+ +  D+  E KR+     R  +   RR   +      + EKE  +
Sbjct: 262 KNLAKTGVTSTSDSEEEGDDQEGEKKRKG---GRNFQTAHRRNMLK-----GQHEKEAAD 313

Query: 352 RRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKK 411
           R+R++ ++ E E+ +                    K  G+ P              E KK
Sbjct: 314 RKRKQEEQMETEQQN--------------------KDEGKKP--------------EVKK 339

Query: 412 SAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKE-PS 470
             KK ++S          + +R+  E K   K           +   ++R +E   E  S
Sbjct: 340 VEKKRETSM-------DSRLQRIHAEIKNSLK----------IDNLDVNRCIEALDELAS 382

Query: 471 VEEKLQKL--HSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRR 528
           ++  +Q+   H+E+              +  L+++   +V+  I++K+T           
Sbjct: 383 LQVTMQQAQKHTEM--------------ITTLKKIRRFKVSQVIMEKST----------- 417

Query: 529 YKANKDVMEKAAEVYTRLKSRVLGPKIEAV--QKVNKAGMEKEKAEEKLAGEELAGEEAP 586
                        +Y + K+  L  + ++V  Q +NK+  E+ + EE    ++  G++ P
Sbjct: 418 ------------MLYNKFKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKD-QGKKGP 464

Query: 587 QEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDL 646
            +K E + +   S  +NG + +Q G   +                 S+ED  D  E    
Sbjct: 465 NKKLEKEQTG--SKTLNGGSDAQDGNQPQHNGE-------------SNEDSKDNHEASTK 509

Query: 647 DRPGSDRQERERARGDS 663
            +P S+ +E E +  DS
Sbjct: 510 KKPSSEERETEISLKDS 526


>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
           sapiens]
          Length = 333

 Score =  203 bits (516), Expect = 5e-52
 Identities = 128/372 (34%), Positives = 187/372 (50%), Gaps = 56/372 (15%)

Query: 1   MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP 60
           M   FKPGDL+FAKMKGYPHWPAR+D++ DGAVKPP NK PIFFFGTHETAFLGPKD+FP
Sbjct: 1   MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP 60

Query: 61  YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
           Y + K+KYGKPNKRKGFNEGLWEI NNP   +S      S  +   ++N +  SD + ++
Sbjct: 61  YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFS------SQQAATKQSNAS--SDVEVEE 112

Query: 121 EDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQA 180
           ++  V               + D+D ++ + N  + +         ++R RK  ++  Q 
Sbjct: 113 KETSVS--------------KEDTDHEEKASNEDVTKAVDITTPKAARRGRKRKAE-KQV 157

Query: 181 SVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240
               +    + ++S + K S +   P     V+ P+  P G  K  K P  S+SD   + 
Sbjct: 158 ETEEAGVVTTATASVNLKVSPKRGRPAA-TEVKIPK--PRGRPKMVKQPCPSESDIITEE 214

Query: 241 DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE----- 295
           D              S              KK   G+K  +KP  +P  ++ K E     
Sbjct: 215 D-------------KSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKR 261

Query: 296 ----RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKE 351
               +   +S+SDS+ +  D+  E KR+     R  +   RR   +      + EKE  +
Sbjct: 262 KNLAKTGVTSTSDSEEEGDDQEGEKKRKG---GRNFQTAHRRNMLK-----GQHEKEAAD 313

Query: 352 RRRERADRGEAE 363
           R+R++ ++ E E
Sbjct: 314 RKRKQEEQMETE 325



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 41/238 (17%)

Query: 160 PALKMSVSKRARK---ASSDLD----QASVSPSEEENSESSSESEKTSDQDFTPEKKAAV 212
           P +K S  + A K   ASSD++    + SVS  + ++ E +S  + T   D T  K A  
Sbjct: 88  PKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTKAVDITTPKAA-- 145

Query: 213 RAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKK 272
              RRG     +K+KA    +++                  A   +++++S +  VS   
Sbjct: 146 ---RRG-----RKRKAEKQVETEE-----------------AGVVTTATASVNLKVS--- 177

Query: 273 PPRGRKPA-EKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARR 331
           P RGR  A E  +PKPRGR PK  + P  S SD  ++E D+ S+ K ++E + ++   + 
Sbjct: 178 PKRGRPAATEVKIPKPRGR-PKMVKQPCPSESDIITEE-DK-SKKKGQEEKQPKKQPKKD 234

Query: 332 RREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGR 389
              Q+EE +  +E +K+E ++  E   +  A+ G   +S  E   DD+  +K+ + GR
Sbjct: 235 EEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGR 292



 Score = 37.4 bits (85), Expect = 0.045
 Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 22/231 (9%)

Query: 285 PKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLRE 344
           PK +    +     S++SSD + +E +     +  D   +   E   +       +  R 
Sbjct: 88  PKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTKAVDITTPKAARR 147

Query: 345 QEKEEKERRRERADRGEAERGSGGSS-------GDELREDDEPVKKRGRKGRGRGP-PSS 396
             K + E++ E  + G     +   +       G     + +  K RGR    + P PS 
Sbjct: 148 GRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATEVKIPKPRGRPKMVKQPCPSE 207

Query: 397 SD-------SEPEAELEREAKKSAKKPQSSSTE---PARKPGQKE--KRVRPEEKQQAKP 444
           SD       S+ + + E++ KK  KK +    E   P ++P +KE  K V  + K  AK 
Sbjct: 208 SDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKT 267

Query: 445 VKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKR 495
                +    EG   D++ EKK++     +     + +K   + ++ D KR
Sbjct: 268 GVTSTSDSEEEG--DDQEGEKKRKGGRNFQTAHRRNMLKGQHEKEAADRKR 316


>gi|7705320 hepatoma-derived growth factor, related protein 3 [Homo
           sapiens]
          Length = 203

 Score =  200 bits (508), Expect = 4e-51
 Identities = 104/203 (51%), Positives = 124/203 (61%), Gaps = 23/203 (11%)

Query: 2   PHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPY 61
           P  +K GDLVFAKMKGYPHWPARID++ +GAVKPP NKYPIFFFGTHETAFLGPKDLFPY
Sbjct: 6   PREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPY 65

Query: 62  DKCKDKYGKPNKRKGFNEGLWEIQNNP---HASYSAPPPVSSSDSEAPEANPADGSDADE 118
            + KDK+GK NKRKGFNEGLWEI+NNP      Y A    SSS++E    N AD S  +E
Sbjct: 66  KEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADASSEEE 125

Query: 119 DDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLD 178
                              DR+E D    + ++ +G KRK        SK++RK+  D D
Sbjct: 126 ------------------GDRVEEDGKGKRKNEKAGSKRKKSYTSKKSSKQSRKSPGDED 167

Query: 179 QASVSPSEEENSESSSESEKTSD 201
                  EEEN  SS   +  +D
Sbjct: 168 DKDC--KEEENKSSSEGGDAGND 188


>gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens]
          Length = 240

 Score =  167 bits (424), Expect = 2e-41
 Identities = 91/214 (42%), Positives = 124/214 (57%), Gaps = 16/214 (7%)

Query: 5   FKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC 64
           +K GDLVFAKMKGYPHWPARID++ + AVK   NKY +FFFGTHETAFLGPKDLFPY++ 
Sbjct: 10  YKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEES 69

Query: 65  KDKYGKPNKRKGFNEGLWEIQNNP---HASYSAPPPVSSSDSEAPEANPADGSDADEDDE 121
           K+K+GKPNKRKGF+EGLWEI+NNP    + Y +    S  +   PE   A+G D D+   
Sbjct: 70  KEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCVEEPEPEPEAAEG-DGDKKGN 128

Query: 122 DRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQAS 181
             G        ++    ++  D  + + ++   LKR+   L     KR ++A +   +  
Sbjct: 129 AEG--------SSDEEGKLVIDEPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEK 180

Query: 182 VSPSEEENSESSSESEKTSDQDFTPEKKAAVRAP 215
            + + E       E EK S    TP +  + R P
Sbjct: 181 EAATLEVERPLPMEVEKNS----TPSEPGSGRGP 210



 Score = 38.1 bits (87), Expect = 0.027
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 13/140 (9%)

Query: 227 KAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK 286
           KA     S  K+  +  +PEP A         ++  SSD +  +      ++  EK   K
Sbjct: 96  KASGYQSSQKKSCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAKEKNEKGALK 155

Query: 287 PRG--------RKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEE 338
            R         ++PK    P     ++ + EV+R    +    +   E  + R   QEEE
Sbjct: 156 RRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEE 215

Query: 339 LRRLREQEKEEKERRRERAD 358
                E+E EE+E  +E A+
Sbjct: 216 -----EEEDEEEEATKEDAE 230



 Score = 35.4 bits (80), Expect = 0.17
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 293 KPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKER 352
           +PE  P ++  D D       +E    +E +    E  + + ++  L+R      E+  +
Sbjct: 111 EPEPEPEAAEGDGDKKGN---AEGSSDEEGKLVIDEPAKEKNEKGALKRRAGDLLEDSPK 167

Query: 353 RRERADRGEAERGSGGSSGDE--LREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAK 410
           R + A+  E E     +   E  L  + E        G GRGPP   + E E E E   K
Sbjct: 168 RPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEEEE-EDEEEEATK 226

Query: 411 KSAKKP 416
           + A+ P
Sbjct: 227 EDAEAP 232



 Score = 35.0 bits (79), Expect = 0.22
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 27/141 (19%)

Query: 348 EEKERRRERADRGEAERGSGGSSGDELRE--DDEPVKKRGRKGRGRGPPSSSDSEPEAEL 405
           EE E   E A+    ++G+   S DE  +   DEP K++  KG                L
Sbjct: 110 EEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAKEKNEKG---------------AL 154

Query: 406 EREA----KKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSE-GFSMD 460
           +R A    + S K+P+      A  P  +EK     E ++  P++VE+    SE G    
Sbjct: 155 KRRAGDLLEDSPKRPKE-----AENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRG 209

Query: 461 RKVEKKKEPSVEEKLQKLHSE 481
              E+++E   EE+  K  +E
Sbjct: 210 PPQEEEEEEDEEEEATKEDAE 230



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 16/98 (16%)

Query: 556 EAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDL----------------S 599
           E  ++ N+ G  K +A + L       +EA   + E+K +  L                S
Sbjct: 143 EPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPS 202

Query: 600 APVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDL 637
            P +G    Q+ E  ED+E E  ++  E P     E L
Sbjct: 203 EPGSGRGPPQEEEEEEDEEEEATKEDAEAPGIRDHESL 240


>gi|110681712 hepatoma derived growth factor-like 1 [Homo sapiens]
          Length = 251

 Score =  147 bits (372), Expect = 2e-35
 Identities = 83/199 (41%), Positives = 110/199 (55%), Gaps = 27/199 (13%)

Query: 5   FKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC 64
           +K GDLVFAK+KGY HWPARI+ +        PN+Y +FFFGTHETAFL PK LFPY +C
Sbjct: 9   YKSGDLVFAKLKGYAHWPARIEHMTQ------PNRYQVFFFGTHETAFLSPKRLFPYKEC 62

Query: 65  KDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVS---SSDSEAPEANPADGSDADEDDE 121
           K+K+GKPNKR+GF+ GLWEI+NNP    S  P  S   S D   PE   A+G      DE
Sbjct: 63  KEKFGKPNKRRGFSAGLWEIENNPTVQASDCPLASEKGSGDGPWPEPEAAEG------DE 116

Query: 122 DRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQAS 181
           D+   A          +  + D D     +   LKR          KR ++A+ D +   
Sbjct: 117 DKPTHA-----GGGGDELGKPDDDKPTEEEKGPLKRSAGDPPEDAPKRPKEAAPDQE--- 168

Query: 182 VSPSEEENSESSSESEKTS 200
               EE  +E ++E+E+ +
Sbjct: 169 ----EEAEAERAAEAERAA 183



 Score = 30.8 bits (68), Expect = 4.2
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 9/79 (11%)

Query: 355 ERADRGEAERGSGGSSGDEL--REDDEPV-KKRGRKGRGRGPPSS------SDSEPEAEL 405
           E A+  E +    G  GDEL   +DD+P  +++G   R  G P         ++ P+ E 
Sbjct: 110 EAAEGDEDKPTHAGGGGDELGKPDDDKPTEEEKGPLKRSAGDPPEDAPKRPKEAAPDQEE 169

Query: 406 EREAKKSAKKPQSSSTEPA 424
           E EA+++A+  ++++   A
Sbjct: 170 EAEAERAAEAERAAAAAAA 188


>gi|186928819 hepatoma-derived growth factor isoform b [Homo
           sapiens]
          Length = 256

 Score =  129 bits (323), Expect = 1e-29
 Identities = 74/197 (37%), Positives = 106/197 (53%), Gaps = 16/197 (8%)

Query: 22  PARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKCKDKYGKPNKRKGFNEGL 81
           P  ID++ + AVK   NKY +FFFGTHETAFLGPKDLFPY++ K+K+GKPNKRKGF+EGL
Sbjct: 43  PHTIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEGL 102

Query: 82  WEIQNNP---HASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASD 138
           WEI+NNP    + Y +    S  +   PE   A+G D D+     G        ++    
Sbjct: 103 WEIENNPTVKASGYQSSQKKSCVEEPEPEPEAAEG-DGDKKGNAEG--------SSDEEG 153

Query: 139 RMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEK 198
           ++  D  + + ++   LKR+   L     KR ++A +   +   + + E       E EK
Sbjct: 154 KLVIDEPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEK 213

Query: 199 TSDQDFTPEKKAAVRAP 215
            S    TP +  + R P
Sbjct: 214 NS----TPSEPGSGRGP 226



 Score = 38.1 bits (87), Expect = 0.027
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 13/140 (9%)

Query: 227 KAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK 286
           KA     S  K+  +  +PEP A         ++  SSD +  +      ++  EK   K
Sbjct: 112 KASGYQSSQKKSCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAKEKNEKGALK 171

Query: 287 PRG--------RKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEE 338
            R         ++PK    P     ++ + EV+R    +    +   E  + R   QEEE
Sbjct: 172 RRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEE 231

Query: 339 LRRLREQEKEEKERRRERAD 358
                E+E EE+E  +E A+
Sbjct: 232 -----EEEDEEEEATKEDAE 246



 Score = 35.4 bits (80), Expect = 0.17
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 293 KPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKER 352
           +PE  P ++  D D       +E    +E +    E  + + ++  L+R      E+  +
Sbjct: 127 EPEPEPEAAEGDGDKKGN---AEGSSDEEGKLVIDEPAKEKNEKGALKRRAGDLLEDSPK 183

Query: 353 RRERADRGEAERGSGGSSGDE--LREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAK 410
           R + A+  E E     +   E  L  + E        G GRGPP   + E E E E   K
Sbjct: 184 RPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEEEE-EDEEEEATK 242

Query: 411 KSAKKP 416
           + A+ P
Sbjct: 243 EDAEAP 248



 Score = 35.0 bits (79), Expect = 0.22
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 27/141 (19%)

Query: 348 EEKERRRERADRGEAERGSGGSSGDELRE--DDEPVKKRGRKGRGRGPPSSSDSEPEAEL 405
           EE E   E A+    ++G+   S DE  +   DEP K++  KG                L
Sbjct: 126 EEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAKEKNEKG---------------AL 170

Query: 406 EREA----KKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSE-GFSMD 460
           +R A    + S K+P+      A  P  +EK     E ++  P++VE+    SE G    
Sbjct: 171 KRRAGDLLEDSPKRPKE-----AENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRG 225

Query: 461 RKVEKKKEPSVEEKLQKLHSE 481
              E+++E   EE+  K  +E
Sbjct: 226 PPQEEEEEEDEEEEATKEDAE 246



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 16/98 (16%)

Query: 556 EAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDL----------------S 599
           E  ++ N+ G  K +A + L       +EA   + E+K +  L                S
Sbjct: 159 EPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPS 218

Query: 600 APVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDL 637
            P +G    Q+ E  ED+E E  ++  E P     E L
Sbjct: 219 EPGSGRGPPQEEEEEEDEEEEATKEDAEAPGIRDHESL 256


>gi|186928821 hepatoma-derived growth factor isoform c [Homo
           sapiens]
          Length = 233

 Score =  127 bits (320), Expect = 3e-29
 Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 16/196 (8%)

Query: 23  ARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKCKDKYGKPNKRKGFNEGLW 82
           A ID++ + AVK   NKY +FFFGTHETAFLGPKDLFPY++ K+K+GKPNKRKGF+EGLW
Sbjct: 21  AVIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEGLW 80

Query: 83  EIQNNP---HASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDR 139
           EI+NNP    + Y +    S  +   PE   A+G D D+     G        ++    +
Sbjct: 81  EIENNPTVKASGYQSSQKKSCVEEPEPEPEAAEG-DGDKKGNAEG--------SSDEEGK 131

Query: 140 MESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKT 199
           +  D  + + ++   LKR+   L     KR ++A +   +   + + E       E EK 
Sbjct: 132 LVIDEPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKN 191

Query: 200 SDQDFTPEKKAAVRAP 215
           S    TP +  + R P
Sbjct: 192 S----TPSEPGSGRGP 203



 Score = 38.1 bits (87), Expect = 0.027
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 13/140 (9%)

Query: 227 KAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK 286
           KA     S  K+  +  +PEP A         ++  SSD +  +      ++  EK   K
Sbjct: 89  KASGYQSSQKKSCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAKEKNEKGALK 148

Query: 287 PRG--------RKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEE 338
            R         ++PK    P     ++ + EV+R    +    +   E  + R   QEEE
Sbjct: 149 RRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEE 208

Query: 339 LRRLREQEKEEKERRRERAD 358
                E+E EE+E  +E A+
Sbjct: 209 -----EEEDEEEEATKEDAE 223



 Score = 35.4 bits (80), Expect = 0.17
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 293 KPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKER 352
           +PE  P ++  D D       +E    +E +    E  + + ++  L+R      E+  +
Sbjct: 104 EPEPEPEAAEGDGDKKGN---AEGSSDEEGKLVIDEPAKEKNEKGALKRRAGDLLEDSPK 160

Query: 353 RRERADRGEAERGSGGSSGDE--LREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAK 410
           R + A+  E E     +   E  L  + E        G GRGPP   + E E E E   K
Sbjct: 161 RPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEEEE-EDEEEEATK 219

Query: 411 KSAKKP 416
           + A+ P
Sbjct: 220 EDAEAP 225



 Score = 35.0 bits (79), Expect = 0.22
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 27/141 (19%)

Query: 348 EEKERRRERADRGEAERGSGGSSGDELRE--DDEPVKKRGRKGRGRGPPSSSDSEPEAEL 405
           EE E   E A+    ++G+   S DE  +   DEP K++  KG                L
Sbjct: 103 EEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAKEKNEKG---------------AL 147

Query: 406 EREA----KKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSE-GFSMD 460
           +R A    + S K+P+      A  P  +EK     E ++  P++VE+    SE G    
Sbjct: 148 KRRAGDLLEDSPKRPKE-----AENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRG 202

Query: 461 RKVEKKKEPSVEEKLQKLHSE 481
              E+++E   EE+  K  +E
Sbjct: 203 PPQEEEEEEDEEEEATKEDAE 223



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 16/98 (16%)

Query: 556 EAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDL----------------S 599
           E  ++ N+ G  K +A + L       +EA   + E+K +  L                S
Sbjct: 136 EPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPS 195

Query: 600 APVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDL 637
            P +G    Q+ E  ED+E E  ++  E P     E L
Sbjct: 196 EPGSGRGPPQEEEEEEDEEEEATKEDAEAPGIRDHESL 233


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 135/588 (22%), Positives = 211/588 (35%), Gaps = 119/588 (20%)

Query: 60  PYDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPP-----PVSSSDSEAPEANPADGS 114
           P  K   K    +  +  +E   E+Q  P    + P      P   + ++A E++ ++ S
Sbjct: 73  PVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEES 132

Query: 115 DADEDDED-------RGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVS 167
             D+D+ED       +GV                SDSDSD SS++   K + P +     
Sbjct: 133 SDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTV 192

Query: 168 KRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKK 227
           K   KA     +A+   +  + + SSS S  +S  D + E+KAA    +  P    KK+ 
Sbjct: 193 KAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVP----KKQV 248

Query: 228 APSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKP 287
              A             P   A   +  SSSS  SSSD +   KKP + +      +P P
Sbjct: 249 VAKA-------------PVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPP 295

Query: 288 RGRKPKPE---RPPSSS--------SSDSDSDEVDRISEWKRRDEARRRELEARRRREQE 336
               PK     +PP  +        SS+  SDE D  SE +++   +    +A  +    
Sbjct: 296 SAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPA 355

Query: 337 EELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSS 396
           ++                       AE  S  S  D   +D+ P K  G           
Sbjct: 356 KK----------------------AAESSSDSSDSDSSEDDEAPSKPAG----------- 382

Query: 397 SDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEG 456
                        K S+ KP  ++  PA KP           KQ     +   TRK    
Sbjct: 383 -----------TTKNSSNKPAVTTKSPAVKPA-------AAPKQPVGGGQKLLTRKADSS 424

Query: 457 FSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKN 516
            S     E++   S EEK +K+         V +   K    A   L   Q        +
Sbjct: 425 SS-----EEESSSSEEEKTKKM---------VATTKPKATAKAALSLPAKQAPQGSRDSS 470

Query: 517 TDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLA 576
           +D  ++  +    K +K  ++K  +       +V G           A  +K KAE   +
Sbjct: 471 SDSDSSSSEEEEEKTSKSAVKKKPQ-------KVAG----GAAPSKPASAKKGKAESSNS 519

Query: 577 GEELAGEEAPQEKAEDKPSTDLSAP-VNGEA--TSQKGESAEDKEHEE 621
                  E  +EK + K S    AP  NG +  T+Q G++A++ E EE
Sbjct: 520 SSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEE 567



 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 119/533 (22%), Positives = 203/533 (38%), Gaps = 69/533 (12%)

Query: 171 RKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPS 230
           RK  ++   A  +  +  +S+S   SE+  +    P KKAAV A R G   G+   KA  
Sbjct: 66  RKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASE 125

Query: 231 ASDSDSKADSDGAKPE----------PVAMARSASSSSSSSSSSDSDVSVK-KPPRGRKP 279
           +S S+  +D D  + +          P A A  A    + SS SDSD S + +PP+ +KP
Sbjct: 126 SSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKP 185

Query: 280 AEKPL---------PKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEAR 330
              P+         PKP    PK     ++SSS S S            D++   +  A 
Sbjct: 186 KITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSS-------SSSDDSEEEKAAAT 238

Query: 331 RRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRG 390
            ++   ++    +   K      R+ +        S  SS DE  E  +P+K +      
Sbjct: 239 PKKTVPKKQVVAKAPVKAATTPTRKSS-------SSEDSSSDEEEEQKKPMKNKPGPYSS 291

Query: 391 RGPPSS-------SDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAK 443
             PPS+           P+  +E++    + +  S  ++ + +  +K        K   K
Sbjct: 292 VPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTK 351

Query: 444 PVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEEL 503
           P   ++  + S   S     E  + PS      K +S  K A+   SP VK      + +
Sbjct: 352 PPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTK-NSSNKPAVTTKSPAVKPAAAPKQPV 410

Query: 504 GTLQ---------------VTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKS 548
           G  Q                +S   +K   +VAT K     KA   +  K A   +R  S
Sbjct: 411 GGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSS 470

Query: 549 --RVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEA 606
                    E  +K +K+ ++K+        +++AG  AP + A  K     S+  N  +
Sbjct: 471 SDSDSSSSEEEEEKTSKSAVKKKP-------QKVAGGAAPSKPASAKKGKAESS--NSSS 521

Query: 607 TSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERA 659
           +    E  E+K   +G    + P+   +  L   + G        + +E+++A
Sbjct: 522 SDDSSEEEEEKLKGKGSPRPQAPKANGTSAL-TAQNGKAAKNSEEEEEEKKKA 573



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 71/318 (22%), Positives = 132/318 (41%), Gaps = 39/318 (12%)

Query: 88  PHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVT----AVTATAASDR---- 139
           P A  +A     SSDS++ E + A    A          AVT    AV   AA  +    
Sbjct: 353 PPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGG 412

Query: 140 ------MESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSP-----SEEE 188
                  ++DS S +   +S  + KT  +  +   +A   ++    A  +P     S  +
Sbjct: 413 GQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSD 472

Query: 189 NSESSS--ESEKTSDQDF--TPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAK 244
           +  SSS  E EKTS       P+K A   AP +     + K ++ ++S SD  ++ +  K
Sbjct: 473 SDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEK 532

Query: 245 ------PEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPP 298
                 P P A   + +S+ ++ +   +  S ++    +K A   + K    K   +R  
Sbjct: 533 LKGKGSPRPQAPKANGTSALTAQNGKAAKNS-EEEEEEKKKAAVVVSKSGSLK---KRKQ 588

Query: 299 SSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERAD 358
           + ++ ++++ +  +I         +R++ E R         RR+RE+E E   R  + + 
Sbjct: 589 NEAAKEAETPQAKKIKLQTPNTFPKRKKGEKR----ASSPFRRVREEEIEVDSRVADNS- 643

Query: 359 RGEAERGSGGSSGDELRE 376
             +A+RG+ G  G+   +
Sbjct: 644 -FDAKRGAAGDWGERANQ 660


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 90.5 bits (223), Expect = 5e-18
 Identities = 124/585 (21%), Positives = 230/585 (39%), Gaps = 38/585 (6%)

Query: 115 DADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLK-RKTPALKM--SVSKRAR 171
           D+ +DD D   +A     A AA ++    S   K  +       +   LK    +S  A+
Sbjct: 11  DSTKDDIDLDALAAEIEGAGAAKEQEPQKSKGKKKKEKKKQDFDEDDILKELEELSLEAQ 70

Query: 172 KASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSA 231
              +D +  +V P+E    E +S+ +K   Q    +      +        + KK A   
Sbjct: 71  GIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPK 130

Query: 232 SDSDSKADSD---GAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGR--------KPA 280
            +  S +D D      P+        S+     S  D D S K   R R          +
Sbjct: 131 VEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDES 190

Query: 281 EKPLPKPRGRKPKPERPPSSS--SSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEE 338
           ++ L   +G+K   +  P  +  S + D D   +I    ++ +A ++E E ++R E++ +
Sbjct: 191 DEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQK-KAEKKERERKKRDEEKAK 249

Query: 339 LRRLREQE------------KEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGR 386
           LR+L+E+E            KE + +  E   + +    +G     E + +     +   
Sbjct: 250 LRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDN 309

Query: 387 KGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPA-RKPGQKEKRVRPEEKQQAKPV 445
           +G  +          + E E+E KK   K    + + A  K  ++E+R + EE+++ K +
Sbjct: 310 EGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRL 369

Query: 446 -KVERTRKRSEGFSMDRKVEKK-KEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEEL 503
            ++E  RK  E    +++  KK KE   +E+L+K    +  + +      +  L  L+  
Sbjct: 370 EELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQ 429

Query: 504 GTLQVTSQILQKNTDVV--ATLKKIRRYKANKDVMEKAAEVYTRLKSRVLG-PKIEAVQK 560
           G    +   L K   +      KKI +   +K+V E + E+   ++    G P+ E    
Sbjct: 430 GVEVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSE-SMELCAAVEVMEQGVPEKEETPP 488

Query: 561 VNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHE 620
             +   E++  +  L   E    +   EK E      +    N E   ++ E  E+ E  
Sbjct: 489 PVEPEEEEDTEDAGLDDWEAMASDEETEKVEGN-KVHIEVKENPEEEEEEEEEEEEDEES 547

Query: 621 EGRDSEEGPRCGSSEDLHDVREGPDLDRPGS-DRQERERARGDSE 664
           E  + EEG   GS  D  D +   + D   + D++  +    DSE
Sbjct: 548 EEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSE 592



 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 80/359 (22%), Positives = 131/359 (36%), Gaps = 45/359 (12%)

Query: 122 DRGVMAVT---AVTATAASDRMESDSDS-DKSSDNSGLKRKTPALKMSVSKRARKASSDL 177
           D GV+  +   A T TAA D  E D    DK       + K    K   SK   KA   +
Sbjct: 288 DTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKA---M 344

Query: 178 DQASVSPSEEENSESSSESEKTSD-QDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDS 236
            +A     EEE  +   E E+    ++   ++K   R  +      RKK+K     +   
Sbjct: 345 QEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKR--ERKKQKEKERKERLK 402

Query: 237 KADSDGAKPEPVAMARSASS----SSSSSSSSDSDVSVKKPPRGRKPAEKPLPKP----- 287
           K      K +  A AR+ ++     +        D   KK P       K +P+      
Sbjct: 403 KEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLESKE 462

Query: 288 ---------------RGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRR 332
                          +G   K E PP     + +  E   + +W+    A   E E    
Sbjct: 463 VSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAM--ASDEETEKVEG 520

Query: 333 REQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRG 392
            +   E++   E+E+EE+E   E  +  E E   G S G E  E+DE V      G+   
Sbjct: 521 NKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGK--- 577

Query: 393 PPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTR 451
              + D +P  E+  +++  +       T+  R   + ++R+     + +K V  E+ R
Sbjct: 578 ---TLDKKPSKEMSSDSEYDS---DDDRTKEERAYDKAKRRIEKRRLEHSKNVNTEKLR 630


>gi|195976782 Paf1/RNA polymerase II complex component [Homo
           sapiens]
          Length = 710

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 84/353 (23%), Positives = 162/353 (45%), Gaps = 23/353 (6%)

Query: 111 ADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRA 170
           A G +       RG    T V       R+  DSD++ S  +  L ++     +S++KR 
Sbjct: 22  AGGQEGSPGGGRRGSRGTTMVKKRKG--RVVIDSDTEDSGSDENLDQEL----LSLAKRK 75

Query: 171 RKASSDLDQASVSPSEEENSESS-SESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAP 229
           R  S + +     P+   +SE+S S+ E T   +   +K  A +  ++G +  +  K A 
Sbjct: 76  RSDSEEKEPPVSQPAASSDSETSDSDDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTAS 135

Query: 230 S-ASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPR 288
           S +SD DS A+S    PE   ++ S S+SSSSSS SDS    ++   G     + L    
Sbjct: 136 SGSSDKDSSAESSA--PEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDG---YGEDLMGDE 190

Query: 289 GRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRR--------ELEARRRREQEEELR 340
             + + E+           + +++    KRR E +++        + E ++++E+E+E +
Sbjct: 191 EDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKK 250

Query: 341 RLRE-QEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPP-SSSD 398
           +L + QE +     +ER  + + +      + +EL+ + E  K R  +   +  P  +S+
Sbjct: 251 KLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSE 310

Query: 399 SEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTR 451
              + E E E  KS++K   SS   +    ++++ + P+ +  + P ++ R R
Sbjct: 311 VYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVR 363



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 93/453 (20%), Positives = 163/453 (35%), Gaps = 98/453 (21%)

Query: 208 KKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSD 267
           + AA  A    PL G ++      S    +  S G         R    S +  S SD +
Sbjct: 9   RAAAAAAAVAVPLAGGQE-----GSPGGGRRGSRGTTMVKKRKGRVVIDSDTEDSGSDEN 63

Query: 268 VSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRREL 327
           +  +     ++         R    + E P S  ++ SDS+  D   EW       +++ 
Sbjct: 64  LDQELLSLAKRK--------RSDSEEKEPPVSQPAASSDSETSDSDDEWTFGSNKNKKKG 115

Query: 328 EARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRK 387
           +AR+                E+K   +++A++  +   SG S  D   E   P +     
Sbjct: 116 KARKI---------------EKKGTMKKQANKTAS---SGSSDKDSSAESSAPEEGEVSD 157

Query: 388 GRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKV 447
                  SSSDS+  +E E       +       + AR     EK     E++Q    ++
Sbjct: 158 SDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEK-----EREQELFNRI 212

Query: 448 ERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQ 507
           E+       F + +K++  K+   +EK +K   E            K+ L  ++E    Q
Sbjct: 213 EKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEE----------QEKKKLTQIQE---SQ 259

Query: 508 VTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGME 567
           VTS              K RR K + + ++K ++    LK+                  E
Sbjct: 260 VTSH------------NKERRSKRD-EKLDKKSQAMEELKA------------------E 288

Query: 568 KEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEE 627
           +EK + + A  EL  ++ P + +E               +  + E  +DK  E+   S+ 
Sbjct: 289 REKRKNRTA--ELLAKKQPLKTSE-------------VYSDDEEEEEDDKSSEK---SDR 330

Query: 628 GPRCGSSEDLHDVREGPDLDRPGSDRQERERAR 660
             R  SS++  +  E P   +P S  +E  R R
Sbjct: 331 SSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVR 363



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 68/312 (21%), Positives = 115/312 (36%), Gaps = 66/312 (21%)

Query: 100 SSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKT 159
           S + E P + PA  SD++  D D               D     S+ +K    +    K 
Sbjct: 79  SEEKEPPVSQPAASSDSETSDSD---------------DEWTFGSNKNKKKGKARKIEKK 123

Query: 160 PALKMSVSKRARKASSDLDQAS---------VSPSEEENSESSSESEKTS-DQDFTP--- 206
             +K   +K A   SSD D ++         VS S+  +S SSS+S+ +S D++F     
Sbjct: 124 GTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYG 183

Query: 207 ---------------------EKKAAVRAPRRGPLGGR---KKK----KAPSASDSDSKA 238
                                E++   R  +R  L  R   KKK    K     +   K 
Sbjct: 184 EDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQ 243

Query: 239 DSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGR------KP 292
           + +  K +   +  S  +S +    S  D  + K  +  +  +    K + R      K 
Sbjct: 244 EEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKK 303

Query: 293 KPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKER 352
           +P +     S D + +E D+ SE  + D + R    +    E++EE+    +     +E 
Sbjct: 304 QPLKTSEVYSDDEEEEEDDKSSE--KSDRSSRTS--SSDEEEEKEEIPPKSQPVSLPEEL 359

Query: 353 RRERADRGEAER 364
            R R  R + ER
Sbjct: 360 NRVRLSRHKLER 371



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 62/299 (20%), Positives = 111/299 (37%), Gaps = 35/299 (11%)

Query: 29  ADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKCKDKYGKPNKRKGFNEGLWEIQNNP 88
           +D   K PP   P     + ++      D + +   K+K  K   RK   +G  + Q N 
Sbjct: 77  SDSEEKEPPVSQPA---ASSDSETSDSDDEWTFGSNKNKK-KGKARKIEKKGTMKKQANK 132

Query: 89  HASYSAPPPVSSSDSEAPE------------ANPADGSDADEDDEDRGVMAVTAVTATAA 136
            AS  +    SS++S APE            ++ +D   + ED+E         +     
Sbjct: 133 TASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEED 192

Query: 137 SDRMESDSDSDKSSD-------------NSGLKRKTPALKMSVSKRARKASSDLDQASVS 183
             R+E  ++ ++  +                +K+K    K    K  +K   +  +    
Sbjct: 193 RARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKL 252

Query: 184 PSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSD----SKAD 239
              +E+  +S   E+ S +D   +KK+      +     RK + A   +       S+  
Sbjct: 253 TQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVY 312

Query: 240 SDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKP--LPKPRGRKPKPER 296
           SD  + E    +   S  SS +SSSD +   ++ P   +P   P  L + R  + K ER
Sbjct: 313 SDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLER 371



 Score = 38.9 bits (89), Expect = 0.016
 Identities = 64/315 (20%), Positives = 117/315 (37%), Gaps = 15/315 (4%)

Query: 365 GSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTE-- 422
           G  GS G   R        + RKGR      + DS  +  L++E    AK+ +S S E  
Sbjct: 24  GQEGSPGGGRRGSRGTTMVKKRKGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKE 83

Query: 423 -PARKPGQKEKRVRPEEKQQ-----AKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQ 476
            P  +P         +   +      K  K  + RK  +  +M ++  K       +K  
Sbjct: 84  PPVSQPAASSDSETSDSDDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDS 143

Query: 477 KLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVM 536
              S      +V   D     ++ +   + +          D++   +   R +   +  
Sbjct: 144 SAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTE-K 202

Query: 537 EKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPST 596
           E+  E++ R++ R +  +   ++K  K   +KEK E+K   E    EE  ++K      +
Sbjct: 203 EREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQE----EEQEKKKLTQIQES 258

Query: 597 DLSAPVNGEATSQKGESAEDKEHE-EGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQE 655
            +++  N E  S++ E  + K    E   +E   R   + +L   ++        SD +E
Sbjct: 259 QVTSH-NKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEE 317

Query: 656 RERARGDSEALDEES 670
            E     SE  D  S
Sbjct: 318 EEEDDKSSEKSDRSS 332


>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
          Length = 1564

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 146/667 (21%), Positives = 258/667 (38%), Gaps = 64/667 (9%)

Query: 35   PPPNKYPIFFFGTHETAFLGPKDLFPYDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSA 94
            PP ++ P+   G H+           +++ +D  GK ++ K   E     Q+        
Sbjct: 388  PPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQ------- 440

Query: 95   PPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSG 154
                SSS     +  P DG D  +  + R    +        S  M   S   K S +  
Sbjct: 441  ----SSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPR 496

Query: 155  LKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRA 214
              R T   + +   R R+      +    P E  +   +   E++S  +   E +   R+
Sbjct: 497  DSRST---RDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRS 553

Query: 215  PRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPP 274
              R    GR + + P   +  S+           + +    S  + SS  + D   ++  
Sbjct: 554  EIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDN 613

Query: 275  RG--------RKPAEKPLPKPRGRKPKPERP--PSSSSSDSDSDE------VDRISEWKR 318
            R         R+  E+     R R  +P  P      + + + DE      VDR+ +  R
Sbjct: 614  RDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDD--R 671

Query: 319  RDEARR---RELEARRRREQEEELRRLREQEKE---------EKERRRERADRGEAERGS 366
            RDE  R   RE E  R RE+E E  R RE+EKE         E+ER RE+    E +R  
Sbjct: 672  RDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDR 731

Query: 367  GGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARK 426
                  E   + +  K+R R+   R      + E E E ERE +++ ++ +    +   +
Sbjct: 732  DHDRERERERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWE 791

Query: 427  PGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFAL 486
               K +  R E++++ +  +  R            + E    P    K ++ HS    A 
Sbjct: 792  DKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDA- 850

Query: 487  KVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRL 546
              +S D K   N    L +  V  Q  +  +    T  +  R+K  +D   +  E   R 
Sbjct: 851  -YNSGDDK---NEKHRLLSQVVRPQESRSLSPSHLTEDRQGRWK-EEDRKPERKESSRRY 905

Query: 547  KSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVN-GE 605
            + + L  K+ +V K      ++E+ E   +    A +     ++ED+ ++D +   N  +
Sbjct: 906  EEQELKEKVSSVDK------QREQTEILESSRMRAQDIIGHHQSEDRETSDRAHDENKKK 959

Query: 606  ATSQKGESAEDKEHEEGRDSEEGPRCGSSED--LHDVREGPDLDRPGSDRQERERARGDS 663
            A  QK    + KE + G   E G    +SED  +   ++G    +  S  ++R++++GDS
Sbjct: 960  AKIQKKPIKKKKEDDVG--IERGNIETTSEDGQVFSPKKG---QKKKSIEKKRKKSKGDS 1014

Query: 664  EALDEES 670
            +  DEE+
Sbjct: 1015 DISDEEA 1021



 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 98/419 (23%), Positives = 145/419 (34%), Gaps = 70/419 (16%)

Query: 115 DADEDDEDRGVMAVTAVTATAAS-DRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKA 173
           + + DD D G +    V   +    R +   +  K    +  KR+   +K  VS    ++
Sbjct: 145 ETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRS 204

Query: 174 ----SSDLDQASVSPSEEENSESSSESEKTS--------------DQDFTPEKKAAVRAP 215
               S  L ++S SP  + + +SSS S+K                +      KK   R P
Sbjct: 205 KLSPSPSLRKSSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTP 264

Query: 216 RRGP------LGGRKKKKAPSASDSDSKADSDGA--------------KPE---PVAMAR 252
              P        G+K K+     D   +   DG               KP    P     
Sbjct: 265 SPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHH 324

Query: 253 SASSSSSSSSSSDSDVSVKK----PPRGRKPA---EKPLPKP--RGRKPKPERPPSSSSS 303
           S  SS   SSSS S  S+++    P R R P+   ++ L  P  R   P P    SS   
Sbjct: 325 SPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQR 384

Query: 304 DSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAE 363
                        K R +  R      RR E+ E+ R  R++EK+ +E R    D+    
Sbjct: 385 KQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQ---- 440

Query: 364 RGSGGSSGDELREDDEPVKKRGRKGRG--------RGPPSSSDSEPEAELEREAKKSAKK 415
                SS  + R+D EP   R R+           R      DS    +  R+ K+S   
Sbjct: 441 -----SSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDP 495

Query: 416 PQSSSTEPARKPGQKEKR--VRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVE 472
             S ST  A     +E R   R E+    +     R   R E    + + E + E   E
Sbjct: 496 RDSRSTRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSE 554



 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 80/395 (20%), Positives = 146/395 (36%), Gaps = 39/395 (9%)

Query: 116  ADEDDEDRGVMAVTAVTATAASDRMESD------------SDSDKSSDNSGLKRKTPALK 163
            +DED  DR  +     TATA +                  + +  ++  + L   T A  
Sbjct: 1068 SDEDVPDRTEVTEAEHTATATTPGSTPSPLSSLLPPPPPVATATATTVPATLAATTAAAA 1127

Query: 164  MSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGR 223
             S S  A   S+     + + +   N +S  +  +T  +           A  R P+   
Sbjct: 1128 TSFSTSAITISTSATPTNTTNNTFANEDSHRKCHRTRVEKVETPHVTIEDAQHRKPMD-- 1185

Query: 224  KKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKP 283
            +K+ +   S+  +++ + G         RS S+ S+  S  D     +    G +  EK 
Sbjct: 1186 QKRSSSLGSNRSNRSHTSGR-------LRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKT 1238

Query: 284  --LPKPRGRKPK--------PERPPSSSSSDSDSDEVDRIS-EWKRRDEARRRELEARRR 332
              L     RK +        P R  SS   DS S    R S E  R+  +R    ++R R
Sbjct: 1239 KSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDR 1298

Query: 333  REQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRG 392
             ++ +     RE+E+E ++ R+   DR   +        D LRE +   ++  R+   R 
Sbjct: 1299 LQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDRE 1358

Query: 393  PPSSSDSEPEAELEREAKKSAKKPQSSSTE--PARKPGQKEKRVRPEEKQQ--AKPVKVE 448
                     E + +R+  ++ +  Q  S +   A+  G+ E+ +    +        +++
Sbjct: 1359 RERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDLESTSRDSLALDKERMD 1418

Query: 449  RTRKRSEGFSMDRKVEKKKEPSV---EEKLQKLHS 480
            +     +GF    K E+ +       E KL   HS
Sbjct: 1419 KDLGSVQGFEETNKSERTESLEAGDDESKLDDAHS 1453



 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 102/549 (18%), Positives = 185/549 (33%), Gaps = 69/549 (12%)

Query: 137 SDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQ-------ASVSPSEEEN 189
           S +      S KSS  S   RKT A+   +  + R + ++  +       +   P  E+ 
Sbjct: 215 SSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPEDI 274

Query: 190 SESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVA 249
           +      EK   +D   EK       R G   GR  ++     D        G    P++
Sbjct: 275 ALGKKYKEKYKVKDRIEEKT------RDGKDRGRDFERQREKRDKPRSTSPAGQHHSPIS 328

Query: 250 MARSASSSSSSSSSSDSDVSVKKPPRGRKPA---EKPLPKPRGRKPKPERPPSSSSSDSD 306
               +SSS S SS      S   P R R P+   ++ L  P  R   P    S SS    
Sbjct: 329 SRHHSSSSQSGSSIQRHSPS---PRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSP--- 382

Query: 307 SDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGS 366
                           +R++   R R    E+ R   E+  +  +RR ER +    +R  
Sbjct: 383 ----------------QRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDR 426

Query: 367 GGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARK 426
              S +E   + +    R  +          D EP    +R   +  +  +        +
Sbjct: 427 EKDSREEREYEQDQSSSRDHR---------DDREPRDGRDRRDARDTRDRRELRDSRDMR 477

Query: 427 PGQKEKRVRPEEKQQAKPVKVERTR-----KRSEGFSMDRKVEKKKEPSVEEKLQKLHSE 481
             ++ +    + K+   P     TR     +  EG    RK +   E S       L  E
Sbjct: 478 DSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLREE 537

Query: 482 -IKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA 540
             +  ++ +S +  R     + +G  +     L +     +   +I  + +N       +
Sbjct: 538 SSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSN-------S 590

Query: 541 EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSA 600
             +   ++R   P+ +   + +     ++ + E+  GE    +     + + +P    S+
Sbjct: 591 NYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGER---DRRDNRERDQRP----SS 643

Query: 601 PVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERAR 660
           P+  +   +  E   D+  EE R      R        D     D +R     +ER+R R
Sbjct: 644 PIRHQ--GRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDRER 701

Query: 661 GDSEALDEE 669
                L+ E
Sbjct: 702 EKERELERE 710



 Score = 38.5 bits (88), Expect = 0.020
 Identities = 100/573 (17%), Positives = 199/573 (34%), Gaps = 58/573 (10%)

Query: 136  ASDRMESDSDSDKSSDNSGLKRKTPALKMSVS---KRARKASSDLDQASVSPSEEENSES 192
            + DR  SD   D++   + +++K    K       +R    ++  D    SP + +  +S
Sbjct: 943  SEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKS 1002

Query: 193  SSESEKTS--DQDFTPEKKAAVRAPRRGP---------------------LGGRKKKKAP 229
              +  K S  D D + E+ A     +RGP                     L   +KK+  
Sbjct: 1003 IEKKRKKSKGDSDISDEEAAQQSKKKRGPRTPPITTKEELVEMCNGKNGILEDSQKKEDT 1062

Query: 230  SASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRG 289
            + SD   +   D  + E      +A++++  S+ S     +  PP         +P    
Sbjct: 1063 AFSDWSDEDVPD--RTEVTEAEHTATATTPGSTPSPLSSLLPPPPPVATATATTVPATLA 1120

Query: 290  RKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLR-EQEKE 348
                      S+S+ + S      +             +  R R ++ E   +  E  + 
Sbjct: 1121 ATTAAAATSFSTSAITISTSATPTNTTNNTFANEDSHRKCHRTRVEKVETPHVTIEDAQH 1180

Query: 349  EKERRRERADRGEAERGSGGSSGDELREDDEPVKKRG---RKGRGRGPPSSS-DSEPEAE 404
             K   ++R+    + R +   +   LR        R    + GR R   S S D E    
Sbjct: 1181 RKPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKTKS 1240

Query: 405  LEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGF-SMDRKV 463
            LE   ++ ++  Q    EP+R      +  R    +++ P    +   RS  F S DR  
Sbjct: 1241 LEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQ 1300

Query: 464  EKKKEPSVEEKLQKLHSEIKFALKVDSP-------DVKRCLNALEELGTLQVTSQILQKN 516
            E+ +     E+ ++     +     D+        D  R      E    +      ++ 
Sbjct: 1301 ERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDRERE 1360

Query: 517  TDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNK--AGMEKEKAEEK 574
              +  ++++ R    ++       E   R ++++ G     ++  ++    ++KE+ ++ 
Sbjct: 1361 RLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDLESTSRDSLALDKERMDKD 1420

Query: 575  LAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSS 634
            L   +   E    E+ E   + D              ES  D  H  G  + EG    S 
Sbjct: 1421 LGSVQGFEETNKSERTESLEAGD-------------DESKLDDAHSLGSGAGEGYEPISD 1467

Query: 635  EDLHDVREGPDLDRPGSDRQERERARGDSEALD 667
            ++L ++  G    R   D+Q+ E+     + +D
Sbjct: 1468 DELDEILAGDAEKR--EDQQDEEKMPDPLDVID 1498



 Score = 36.6 bits (83), Expect = 0.077
 Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 26/205 (12%)

Query: 385 GRKGRGRGPPSS---SDSEPEAELEREAKKSAK----KPQSSSTEPARKPGQKE-KRVRP 436
           G   RG+G  S+   S   P  +L    K   +    +PQ  +TE +  P +KE  R R 
Sbjct: 62  GPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGRH 121

Query: 437 EEKQQAKPVK----------VERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFAL 486
            EK+  K  K          VE    R +  + D   +   E S+E K QK+  E+   +
Sbjct: 122 REKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQREL---M 178

Query: 487 KVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRY-KANKDVMEKAAEVYTR 545
           K++  ++++     E +   +V+ ++++       +L+K  +  K        +A    R
Sbjct: 179 KLEQENMEK---REEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKSSSASKKDR 235

Query: 546 LKSRVLGPKIEAVQKVNKAGMEKEK 570
             S V  P ++  Q+ +K    K+K
Sbjct: 236 KTSAVSSPLLDQ-QRNSKTNQSKKK 259



 Score = 33.1 bits (74), Expect = 0.85
 Identities = 81/415 (19%), Positives = 146/415 (35%), Gaps = 64/415 (15%)

Query: 285 PKPRGR------KPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEE 338
           P PRG+      +  PERP         +   D  +E ++R+     E  +  R+E    
Sbjct: 63  PSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRNT---EESSSPVRKESS-- 117

Query: 339 LRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSD 398
             R R +EKE+ +  +ER    E E     ++ D+    D                 + D
Sbjct: 118 --RGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGD----------------INYD 159

Query: 399 SEPEAELEREAKKSAKKPQSSSTEPARKPGQ--KEKRVRPEE-----------KQQAKPV 445
              E  LE + +K  ++      E   K  +   +K V PE            ++ +K  
Sbjct: 160 YVHELSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSP 219

Query: 446 KVERTRKRSEGFSMDRKVEKKKEPSV-EEKLQKLHSEIKFALKVDSP------DVKRCLN 498
           K + + K S     DRK      P + +++  K +   K   +  SP      D+     
Sbjct: 220 KRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPEDIALGKK 279

Query: 499 ALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKD---VMEKAAEVYTRLKSRVLGPKI 555
             E+    +V  +I +K  D     +   R +  +D       A + ++ + SR      
Sbjct: 280 YKEK---YKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSS 336

Query: 556 EAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAE 615
           ++   + +      +        +       +  A   PS  LS+P   ++  +      
Sbjct: 337 QSGSSIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMR 396

Query: 616 DK-EHEEGRDSEEGPRCGSSEDLHDVREGP--DLDRPGSDRQERERARGDSEALD 667
           +K  H+  R S+      S +  H+ RE      DR    R+ERE  +  S + D
Sbjct: 397 EKGRHDHERTSQ------SHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRD 445


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 118/455 (25%), Positives = 173/455 (38%), Gaps = 87/455 (19%)

Query: 88   PHASYSAPPPVSSSDSEAPEAN-----PADGSDADEDDEDRGVMAVTAV----------- 131
            P A    P P S S S +PE N     P       E   D+  +A T +           
Sbjct: 1486 PKALPQTPRPRSRSPS-SPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQE 1544

Query: 132  --TATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASS-DLDQAS-VSPSEE 187
                 +AS +  S+SDS   S +S  K +TP     + +R+R  SS ++D  S +SP   
Sbjct: 1545 LDVKPSASPQERSESDS---SPDSKAKTRTP-----LRQRSRSGSSPEVDSKSRLSPRRS 1596

Query: 188  ENSESSSESEKT-------SDQDFTPEKKA-AVRA-PRRGPLGGRKKKKAPSASDSDSKA 238
             +  S    +K        S  D +PE KA A RA PRR   G   K + PS   S S  
Sbjct: 1597 RSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTE 1656

Query: 239  DS-------------DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLP 285
             S               + PEP   +R+     SS SS +     +   R R  +  P  
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPET 1716

Query: 286  KPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEE---LRRL 342
            + R   P+  R PS SS +    E  R S  +R   + R +  +RR R    +   L+R 
Sbjct: 1717 RSR-TPPRHRRSPSVSSPEPA--EKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRS 1773

Query: 343  REQEKEEKERRRERADRGEAER---------------------GSGGSSGDELREDDEPV 381
            R + + EK R   R DR  + +                     GSG  S    R++    
Sbjct: 1774 RSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRT 1833

Query: 382  KKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKK--PQSSSTEPARKPGQKEKRVRPEEK 439
              R R+GR R PP+S             K+S  +  P +     +R P    +R R    
Sbjct: 1834 SSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSR---- 1889

Query: 440  QQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEK 474
             +  PV   R+R R+   S+ R+  + +   V  +
Sbjct: 1890 SRTSPVSRRRSRSRT---SVTRRRSRSRASPVSRR 1921



 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 87/295 (29%), Positives = 115/295 (38%), Gaps = 34/295 (11%)

Query: 99   SSSDSEAPEANPADG---SDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGL 155
            S+ D     + PA G   SD  E     G    +A+ A   +    S S S  SS +S  
Sbjct: 2486 SAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSS- 2544

Query: 156  KRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAP 215
                       S  +  +SS    +S S SE  +     E         TP  K AVR  
Sbjct: 2545 -----------SSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREG 2593

Query: 216  RRG-PLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPP 274
            R   P   ++K+++ S+S S S + S  +     + + S+SSSSSSSSSS S  S    P
Sbjct: 2594 RPPEPTPAKRKRRSSSSSSSSSSSSSSSSS----SSSSSSSSSSSSSSSSSSSSSSSSSP 2649

Query: 275  RGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRRE 334
               KP  + LPKP   K KP  PP    S S    +D +     RD          RRR 
Sbjct: 2650 SPAKPGPQALPKPASPK-KP--PPGERRSRSPRKPIDSL-----RDSRSLSYSPVERRRP 2701

Query: 335  QEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGR 389
              +     R+Q+    ER   R  RG+    S   S    RE   P   R R  R
Sbjct: 2702 SPQP--SPRDQQSSSSERGSRRGQRGD----SRSPSHKRRRETPSPRPMRHRSSR 2750



 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 94/430 (21%), Positives = 159/430 (36%), Gaps = 40/430 (9%)

Query: 76   GFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATA 135
            GF+  + E  N P  +     P      ++  ++    S+   D  ++  M+     ++ 
Sbjct: 1346 GFSSEVKEDLNGPFLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSP 1405

Query: 136  ASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSD-LDQASVSPSEEENSESS- 193
              D +      ++SS  S  + K   L  + S+R+R  SS  L   S +PS    S SS 
Sbjct: 1406 VLDAVPRTPSRERSSSASSPEMKD-GLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSP 1464

Query: 194  -------SESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSK--------A 238
                   + S   S+ D +PE KA  + P       R + ++PS+ + ++K        +
Sbjct: 1465 GMKDIPRTPSRGRSECDSSPEPKALPQTP-------RPRSRSPSSPELNNKCLTPQRERS 1517

Query: 239  DSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPP 298
             S+ +  +           S S SS + DV     P+ R  ++   P  + +   P R  
Sbjct: 1518 GSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSS-PDSKAKTRTPLRQR 1576

Query: 299  SSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERAD 358
            S S S  + D   R+S  + R  +     +  R   + +       + K    R   R  
Sbjct: 1577 SRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRS 1636

Query: 359  R-GEAERGSG----GSSGDELREDDEPVKKRGRKG---------RGRGPPSSSDSEPEAE 404
            R G + +G G    GSS  E   +  P  +  R+G         + R PP    S    E
Sbjct: 1637 RSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPE 1696

Query: 405  LEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVE 464
            L R+A+ S +   +SS+   R       R  P         K   +R+R    S   K  
Sbjct: 1697 LTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTT 1756

Query: 465  KKKEPSVEEK 474
             ++  S   K
Sbjct: 1757 SRRGRSPSPK 1766



 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 72/323 (22%), Positives = 117/323 (36%), Gaps = 26/323 (8%)

Query: 148 KSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPE 207
           +S    G  R     +   S+ AR+  S     S SP+    S S + + +   +  TP 
Sbjct: 535 RSPQRPGWSRSRNTQRRGRSRSARRGRSH----SRSPATRGRSRSRTPARRGRSRSRTPA 590

Query: 208 KKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSD 267
           ++   R+  R P   R + + P+             +    +  R  S S S +  S   
Sbjct: 591 RR---RSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647

Query: 268 VSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRREL 327
            S     RGR  +  P  + R R   P R    S S + +      S   RR  +R R L
Sbjct: 648 RSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSL 707

Query: 328 EARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRK 387
             R R       RR R     E++ +        ++R S  +S  E+++     +   R+
Sbjct: 708 VRRGRSHSRTPQRRGRSGSSSERKNKSR-----TSQRRSRSNSSPEMKKS----RISSRR 758

Query: 388 GRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKV 447
            R    P S  ++    L R    S+  P+  S  P R+   +    +P+ K +  P   
Sbjct: 759 SRSLSSPRSK-AKSRLSLRRSLSGSSPCPKQKSQTPPRR--SRSGSSQPKAKSRTPP--- 812

Query: 448 ERTRKRSEGFSMDRKVEKKKEPS 470
               +RS   S     +K K PS
Sbjct: 813 ----RRSRSSSSPPPKQKSKTPS 831



 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 77/380 (20%), Positives = 123/380 (32%), Gaps = 34/380 (8%)

Query: 94  APPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNS 153
           A P    S  ++PE  P   S        +          T  S    S  +S K +   
Sbjct: 397 ASPTRDRSPPKSPEKLPQSSSSESSPPSPQ---------PTKVSRHASSSPESPKPAPAP 447

Query: 154 GLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVR 213
           G  R+  +   S ++   +A  D   +         S S + +++   +  TP K+   R
Sbjct: 448 GSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSR 507

Query: 214 APRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSS---SSSSSSDSDVSV 270
           +  R P   R +           +       P+    +RS ++     S S+      S 
Sbjct: 508 S--RSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSR 565

Query: 271 KKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEAR 330
               RGR  +  P  + R R   P R  S S + +      R    + R  +R       
Sbjct: 566 SPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRT----PA 621

Query: 331 RRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELR---EDDEPVKKRG-- 385
           RRR +     R R + +    R      R  A RG   S     R       P ++ G  
Sbjct: 622 RRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRS 681

Query: 386 ------RKGRGRGPPSSSDSEPEAELEREAKKSAKKPQ-----SSSTEPARKPGQKEKRV 434
                 R+GR R             L R  +  ++ PQ      SS+E   K    ++R 
Sbjct: 682 RSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRS 741

Query: 435 RPEEKQQAKPVKVERTRKRS 454
           R     + K  ++   R RS
Sbjct: 742 RSNSSPEMKKSRISSRRSRS 761



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 56/256 (21%), Positives = 97/256 (37%), Gaps = 15/256 (5%)

Query: 205 TPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSS 264
           TP ++ AV    +      KK +   A+   S +  DG+  +P   AR A   +      
Sbjct: 111 TPGQRPAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKP 170

Query: 265 DSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARR 324
            S V      R    +  P PK + +K K +R   S SS    +      + K R E+  
Sbjct: 171 YSLV------RESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESES 224

Query: 325 RELEAR------RRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDD 378
           ++ + R      +R+ ++++ +R R      K RR  R+   ++   S  +S    R   
Sbjct: 225 KKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSA-SSSDTSRSRSRSAA 283

Query: 379 EPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEE 438
                    GR   P S    E +A        S ++P  SS E A K        + ++
Sbjct: 284 AKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRP--SSPETATKQPSSPYEDKDKD 341

Query: 439 KQQAKPVKVERTRKRS 454
           K++    +   + +RS
Sbjct: 342 KKEKSATRPSPSPERS 357



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 77/395 (19%), Positives = 131/395 (33%), Gaps = 34/395 (8%)

Query: 95  PPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSG 154
           P P S     +   +P       +  +DRG  + ++   +   +R +S       S++  
Sbjct: 168 PKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESS---SPRRERKKSSKKKKHRSESES 224

Query: 155 LKRK----TPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKA 210
            KRK    TP  K     + RK S     A    S   +  +S++S  +SD   +  + A
Sbjct: 225 KKRKHRSPTPKSKRKSKDKKRKRSRSTTPAP--KSRRAHRSTSADSASSSDTSRSRSRSA 282

Query: 211 AVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEP-VAMARSASSSSSSSSSSDSDVS 269
           A +      L GR    A     S  + + D    EP     +  SS  +++    S   
Sbjct: 283 AAKT-HTTALAGRSPSPA-----SGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYE 336

Query: 270 VKKPPRGRKPAEKPLPKPRGRKPKPERP---PSSSSSDSDSDEVDRISEWKRRDEARRRE 326
            K   +  K A +P P P      PE P   P  +     S +    +   +       E
Sbjct: 337 DKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSE 396

Query: 327 LEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSS-------GDELREDDE 379
               R R   +   +L +    E      +  +      S   S       G        
Sbjct: 397 ASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSS 456

Query: 380 PVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEP-------ARKPGQKEK 432
           P  K    GR +   S S +         +  +AK+ +S S  P       +R P  +  
Sbjct: 457 PTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRS 516

Query: 433 RVRPEEKQQAKPVKVERTRK-RSEGFSMDRKVEKK 466
           R      +   P +  R+R  +  G+S  R  +++
Sbjct: 517 RSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRR 551



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 94/442 (21%), Positives = 158/442 (35%), Gaps = 78/442 (17%)

Query: 86   NNPHASYSAP---PPVSSSDSEAPEANPA-DGSDADEDDEDRGVMAVTAVTATAASDRME 141
            ++P     AP   P  S S S +    P+ +GS + E   +    + TA   + +S   +
Sbjct: 1620 SSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK 1679

Query: 142  SDSDSDKSSDNSGLKRKTPAL--KMSVSKRARKASSDLDQASVSPSEEENSESSSESEKT 199
            + S +     +S   R +P L  K  +S+R+R ASS  +  S +P     S S S  E  
Sbjct: 1680 TKSRTPPRRRSS---RSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPA 1736

Query: 200  SDQDFTPEKKAAV-----------RAPRRGPLG---------------GRKKKKAPSASD 233
                 +  +++A            R+P   P G                R++ ++ S+  
Sbjct: 1737 EKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQS 1796

Query: 234  SDSKADSDGAKPEPVAMARSASS---------SSSSSSSSDSDVSVKKPPRGRKPAEK-- 282
            +  +     ++       R  S           SS +SS       + PP  RK +    
Sbjct: 1797 TSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRT 1856

Query: 283  -PLP--------------KPRGRKP--KPERPPSSSSSDSDSDEVDRISEWKRRDEARRR 325
             P P              + R R P     R  S +S  S      R S  +RR  +R  
Sbjct: 1857 SPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRAS 1916

Query: 326  ELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDEL-----REDDEP 380
             +  RR R +   + R R + +    RRR R+      R    S    +     R    P
Sbjct: 1917 PVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSP 1976

Query: 381  VKKRGRKGRGRGPP-----SSSDSEPEAELEREAKKS--AKKPQSSSTEPA-RKPGQKEK 432
            + +  R+ R R  P     S S + P       ++ S   ++   S T PA R+  +   
Sbjct: 1977 ITR--RRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRT 2034

Query: 433  RVRPEEKQQAKPVKVERTRKRS 454
             + P ++ +++     R R RS
Sbjct: 2035 PLLPRKRSRSRSPLAIRRRSRS 2056



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 75/311 (24%), Positives = 107/311 (34%), Gaps = 66/311 (21%)

Query: 144  SDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQD 203
            SD  +   ++G ++ +    +  +K  R +SS    +S S S   +S SSS S  +S   
Sbjct: 2504 SDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDS 2563

Query: 204  FTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSS 263
               E  +    P          K+ PS + +  +A  +G  PEP    R   SSSSSSSS
Sbjct: 2564 ---EGSSLPVQPEVA------LKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614

Query: 264  SDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEAR 323
            S S  S          +                  SSSSS S S      S  K   +A 
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSS---------------SSSSSSSSSSSSSSPSPAKPGPQA- 2658

Query: 324  RRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKK 383
                           L +    +K     RR R+ R   +     S  D       PV++
Sbjct: 2659 ---------------LPKPASPKKPPPGERRSRSPRKPID-----SLRDSRSLSYSPVER 2698

Query: 384  RGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAK 443
            R    R    PS  D                  QSSS+E   + GQ+     P  K++ +
Sbjct: 2699 R----RPSPQPSPRDQ-----------------QSSSSERGSRRGQRGDSRSPSHKRRRE 2737

Query: 444  PVKVERTRKRS 454
                   R RS
Sbjct: 2738 TPSPRPMRHRS 2748



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 96/433 (22%), Positives = 155/433 (35%), Gaps = 77/433 (17%)

Query: 93   SAPPPVSS---SDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKS 149
            S  PP ++   S S  P+A PA  +               A + TAA+    S + +  +
Sbjct: 2314 SGTPPTAANYPSSSRTPQA-PASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMA 2372

Query: 150  SDNSGLKRKTPALKMSVSKRARKASSD--LDQASVSPSEEENSESSSESEKTSDQDFTPE 207
               SG    +P + +S  +R    +S   LD+A           + S+S  TS++  +P 
Sbjct: 2373 PALSGANLTSPRVPLSAYERVSGRTSPPLLDRAR----SRTPPSAPSQSRMTSERAPSPS 2428

Query: 208  KKAAVRAPRRG---PLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASS-----SSS 259
             +   +AP +    P   + +   PSA    S+     A+  PVA ++S SS     ++S
Sbjct: 2429 SRMG-QAPSQSLLPPAQDQPRSPVPSAFSDQSRCLI--AQTTPVAGSQSLSSGAVATTTS 2485

Query: 260  SSSSSDSDVSVKKP-----PRGRKPAEKPLPKPRGR---KPKPERPPSSSSSDSDSDEVD 311
            S+   +  +SV  P       G  PA     +P      +P  ER  SSSSS S S    
Sbjct: 2486 SAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSS 2545

Query: 312  RISEWKRRDEAR-------------RRELEARR----RREQEEELRRLREQEKEEKERRR 354
              S       +              + E+  +R        +E +R  R  E    +R+R
Sbjct: 2546 SSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKR 2605

Query: 355  ERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAK 414
              +    +   S  SS                        SSS S   +     +  S+ 
Sbjct: 2606 RSSSSSSSSSSSSSSSS-----------------------SSSSSSSSSSSSSSSSSSSS 2642

Query: 415  KPQSSSTEPARKPGQK-------EKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKK 467
               SSS  PA KPG +        K+  P E++   P K   + + S   S      ++ 
Sbjct: 2643 SSSSSSPSPA-KPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRP 2701

Query: 468  EPSVEEKLQKLHS 480
             P    + Q+  S
Sbjct: 2702 SPQPSPRDQQSSS 2714



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 62/307 (20%), Positives = 116/307 (37%), Gaps = 30/307 (9%)

Query: 346 EKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPP--------SSS 397
           E  EK+  R RA  G ++    GSS D  R      + R  K     PP        SSS
Sbjct: 126 ELNEKKNERLRAAFGISDSYVDGSSFDPQR------RAREAKQPAPEPPKPYSLVRESSS 179

Query: 398 DSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGF 457
              P  + +++ KK  +  +S S+ P R+  +  K+ +   + ++K  K      +S+  
Sbjct: 180 SRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRK 239

Query: 458 SMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNT 517
           S D+K ++ +  +   K ++ H     A    S D  R  +      T   T+ +  ++ 
Sbjct: 240 SKDKKRKRSRSTTPAPKSRRAHRSTS-ADSASSSDTSRSRSRSAAAKT--HTTALAGRSP 296

Query: 518 DVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAG 577
              +     RR + +    E       R  S     K  +    +K   +KEK+  + + 
Sbjct: 297 SPASG----RRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSP 352

Query: 578 EELAGEEAPQ---------EKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEG 628
                   P+         E+    P    + P++ E  +   E++  ++    +  E+ 
Sbjct: 353 SPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKL 412

Query: 629 PRCGSSE 635
           P+  SSE
Sbjct: 413 PQSSSSE 419



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 21/186 (11%)

Query: 146 SDKSSDNSGLKRKTPALKMSVSKRARKASSDLD-QASVSPSEEENSESSSESEKTSDQDF 204
           S   S     K +TP       +R+R +SS    Q S +PS + +S SS   +  S    
Sbjct: 797 SRSGSSQPKAKSRTPP------RRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSG--- 847

Query: 205 TPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSS 264
           TP ++ ++ +P+           A   S +  +     + P+P   +R+ S  S S SS 
Sbjct: 848 TPPRQGSITSPQ-----------ANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSP 896

Query: 265 DSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARR 324
               S   P +    +  P PK +      +R  S SSS S S    R +  + R  +  
Sbjct: 897 PRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPC 956

Query: 325 RELEAR 330
             +E+R
Sbjct: 957 SNVESR 962



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 95/402 (23%), Positives = 142/402 (35%), Gaps = 66/402 (16%)

Query: 91   SYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSS 150
            S S+PP V SS    P  +P+  S             V A+     S R  S S S   S
Sbjct: 892  SGSSPPRVKSSTP--PRQSPSRSSSPQPK--------VKAII----SPRQRSHSGSSSPS 937

Query: 151  DNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSES--EKTSDQDFTPEK 208
             +    R TP    SVS  +   S  L + S S S   +++   E+   ++     +P  
Sbjct: 938  PSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYP 997

Query: 209  KAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDV 268
            K   + P  GP     K   P     DS   S    P  +++     SS+    S     
Sbjct: 998  KVKAQTP-PGPSLSGSKSPCPQEKSKDSLVQS---CPGSLSLCAGVKSSTPPGESYFGVS 1053

Query: 269  SVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELE 328
            S++      K   +  P  R              SD+ S EV       R+  +    L+
Sbjct: 1054 SLQ-----LKGQSQTSPDHR--------------SDTSSPEV-------RQSHSESPSLQ 1087

Query: 329  ARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKG 388
            ++ +   +    R      E   R   R DRGE       S+   L+    P + R +  
Sbjct: 1088 SKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEF------SASPMLKSGMSPEQSRFQSD 1141

Query: 389  RGRGPPSSSDS---EPEAELEREAKKSAKKPQSSSTEPARKPGQKEK------RVRPEEK 439
                P   S+S   +   E     +K A  PQ  +T  A  P QK+K      + RPE  
Sbjct: 1142 SSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDAT--ASPPRQKDKFSPFPVQDRPESS 1199

Query: 440  QQAKPVKVERTRKRS-EGFSMDRKVEKKKEP--SVEEKLQKL 478
               K       R+RS  G S + K +    P  S +E+L ++
Sbjct: 1200 LVFKDTLRTPPRERSGAGSSPETKEQNSALPTSSQDEELMEV 1241



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 82/334 (24%), Positives = 120/334 (35%), Gaps = 63/334 (18%)

Query: 315 EWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRER-ADRGEAERGSGG----S 369
           E KRR E R  ELE     EQ  E ++++E+    +    E+  + G  E   G     +
Sbjct: 61  ERKRRVELRCLELE-EMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPAVT 119

Query: 370 SGDELREDDEPVKKRGRKGRGRGPP----SSSDSEPEAELEREAKKSAKKP--------- 416
              +L E +E   +R R   G        SS D +  A   REAK+ A +P         
Sbjct: 120 ETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRA---REAKQPAPEPPKPYSLVRE 176

Query: 417 QSSSTEPARKPGQK-EKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKL 475
            SSS  P  K  +K +K+ R    + + P    R RK+S         +KKK  S  E  
Sbjct: 177 SSSSRSPTPKQKKKKKKKDRGRRSESSSP---RRERKKSS--------KKKKHRSESESK 225

Query: 476 QKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDV 535
           ++ H       K  S D KR                   K +       K RR   +   
Sbjct: 226 KRKHRSPTPKSKRKSKDKKR-------------------KRSRSTTPAPKSRRAHRSTSA 266

Query: 536 MEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPS 595
              ++   +R +SR    K         AG     A  +  GE  A    P   +  +PS
Sbjct: 267 DSASSSDTSRSRSRSAAAKTHTTA---LAGRSPSPASGR-RGEGDAPFSEPGTTSTQRPS 322

Query: 596 TDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGP 629
           +  +      AT Q     EDK+ ++   S   P
Sbjct: 323 SPET------ATKQPSSPYEDKDKDKKEKSATRP 350



 Score = 29.6 bits (65), Expect = 9.4
 Identities = 39/182 (21%), Positives = 60/182 (32%), Gaps = 25/182 (13%)

Query: 139  RMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSS---- 194
            R  S S +   +      R +P  +     R    +    ++  SP     S S +    
Sbjct: 1967 RRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAI 2026

Query: 195  ESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSA 254
                 S     P K    R+  R PL  R++ ++ +   +  K      +  P    RSA
Sbjct: 2027 RRRSRSRTPLLPRK----RSRSRSPLAIRRRSRSRTPRTARGKRSL--TRSPPAIRRRSA 2080

Query: 255  SSSSSSSSSSDSDVSVKKPPRGR---------------KPAEKPLPKPRGRKPKPERPPS 299
            S SSS  S S +  + +     R               +P+  P P  R R P    P  
Sbjct: 2081 SGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLG 2140

Query: 300  SS 301
            SS
Sbjct: 2141 SS 2142


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 112/511 (21%), Positives = 199/511 (38%), Gaps = 71/511 (13%)

Query: 163 KMSVSKRARKAS----SDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRG 218
           K+ V +++ K +       ++  V+    E  E  ++ E+  +++   E++A        
Sbjct: 443 KIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAE------- 495

Query: 219 PLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRK 278
             GG ++ K+P A ++ S  + +   P        A + S     + S   VK P + + 
Sbjct: 496 --GGEEETKSPPAEEAASP-EKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKS 552

Query: 279 PAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRI---SEWKRRDEARRREL-------E 328
           PA++    P   K  PE+  + S ++  S E  +     E K   EA+  E        E
Sbjct: 553 PAKEEAKSPPEAK-SPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEE 611

Query: 329 ARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKG 388
           A+   E +  ++   +   E K   + ++   E  +    +   E  E   P K +    
Sbjct: 612 AKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVK 671

Query: 389 RGRGPPSSSDSEPEAELE---------REAKKSAKKPQSSSTEPARKPGQKEKRVRPEEK 439
                P  + S  +AE +         +E  KS +K +S   E A+ P + +  V+ E K
Sbjct: 672 AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 731

Query: 440 QQAK---PVK-----VERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSP 491
              K   PVK      E+ +   +  ++D K  + K P+ EE         KF  K  SP
Sbjct: 732 TPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPAD---KFPEKAKSP 788

Query: 492 DVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVL 551
                    EE+ + +     L+++             KA +  + K  EV + +K    
Sbjct: 789 -------VKEEVKSPEKAKSPLKEDA------------KAPEKEIPKKEEVKSPVKEEEK 829

Query: 552 GPKIEAVQKVNKAGMEK----EKAEEKLAG--EELAGEEAPQEKAEDKPSTDLSAPVNGE 605
             +++  +   KA  EK     K EEK     EE   +EAP+ K E+K    +  P   +
Sbjct: 830 PQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESK 889

Query: 606 ATSQKGESAEDKEHEEGRDSEEGPRCGSSED 636
             ++K E AEDK+     + E   +    ED
Sbjct: 890 VEAKK-EEAEDKKKVPTPEKEAPAKVEVKED 919



 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 114/573 (19%), Positives = 222/573 (38%), Gaps = 59/573 (10%)

Query: 129  TAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEE 188
            T VT     +  +   + +   +  G + +    +        + ++  ++ + SP +EE
Sbjct: 464  TQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEE 523

Query: 189  NSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSK--ADSDGAKPE 246
               + S +E  S +    +  A V++P +     +++ K+P  + S  K  A S      
Sbjct: 524  ---AKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKS 580

Query: 247  PVAMARSASSSSSSSSSSDSDVSVKKPPR--GRKPAEKPLP-KPRGRKPKPERPPSSSSS 303
            P      A   + S + + S    K P +   + PAE   P K   + P   + P  + S
Sbjct: 581  PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS 640

Query: 304  DSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAE 363
             +         E K  ++A+  E E  +  E+ +   +  E +  EK +   +A+    E
Sbjct: 641  PTK-------EEAKSPEKAKSPEKEEAKSPEKAKSPVK-AEAKSPEKAKSPVKAEAKSPE 692

Query: 364  RGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEP 423
            +               PVK+  +       P   +++   + +   K+ AK P+ + + P
Sbjct: 693  KAK------------SPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKS-P 739

Query: 424  ARKPGQKEKRVRPEEKQQAKPVKVERTR---KRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480
             ++  +  ++ +  EK +   VK    +   K       D+  EK K P  EE   K   
Sbjct: 740  VKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEE--VKSPE 797

Query: 481  EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKA--------N 532
            + K  LK D+   ++ +   EE+ +  V  +   +   V    KK    KA         
Sbjct: 798  KAKSPLKEDAKAPEKEIPKKEEVKS-PVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEK 856

Query: 533  KDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGME--KEKAEEKL----------AGEEL 580
            KD  ++ A      K +V   K  AV+K  ++ +E  KE+AE+K           A  E+
Sbjct: 857  KDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEV 916

Query: 581  AGEEAPQEKAE-DKPSTDLSAPVNGEATSQKGESA---EDKEHEEGRDSEEGPRCGSSED 636
              +  P+EK E  K   D +        ++K E+A   +D + E+ +  EE P+  +   
Sbjct: 917  KEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAK 976

Query: 637  LHDVREGPDLDRPGSDRQERERARGDSEALDEE 669
              D     +  +P +++ E+  +    ++   E
Sbjct: 977  EDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPE 1009



 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 83/423 (19%), Positives = 160/423 (37%), Gaps = 36/423 (8%)

Query: 87   NPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDS 146
            +P  + S     + S +EA      +     E        + T   A +       + + 
Sbjct: 600  SPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEE 659

Query: 147  DKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTP 206
             KS + +    K  A     +K   KA +   + + SP +EE            ++  +P
Sbjct: 660  AKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSP 719

Query: 207  EK-----KAAVRAPRRGPLGGRKKKKAPSASDSDSKAD-----SDGAKPEPVAMARSASS 256
            EK     K   + P +     +++ K+P  + S  KA      S  AK      ARS + 
Sbjct: 720  EKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPAD 779

Query: 257  SSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEW 316
                 + S     VK P + + P ++    P    PK E   S    +    EV      
Sbjct: 780  KFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPP 839

Query: 317  KRRDEAR-------RRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGS 369
            K+ +E +         + ++++    ++E  + + +EK+E    + +  + EA++     
Sbjct: 840  KKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAED 899

Query: 370  SGD------------ELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQ 417
                           E++ED +P +K   +   + P  +   EP    E+  K++A + +
Sbjct: 900  KKKVPTPEKEAPAKVEVKEDAKPKEKT--EVAKKEPDDAKAKEPSKPAEK--KEAAPEKK 955

Query: 418  SSSTEPARKPGQKEK---RVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEK 474
             +  E A+KP +K K   + + ++K  +K     +  K  +  S D+K  K  E + E+K
Sbjct: 956  DTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDK 1015

Query: 475  LQK 477
              K
Sbjct: 1016 AAK 1018



 Score = 76.6 bits (187), Expect = 7e-14
 Identities = 111/551 (20%), Positives = 206/551 (37%), Gaps = 66/551 (11%)

Query: 79   EGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASD 138
            EG  E   +P A  +A P   +      EA     + + E +E +    V +     +  
Sbjct: 495  EGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPA 554

Query: 139  RMESDSDSDKSSDN-----------SGLKRKTPALKMSVS----KRARKASSDLDQASVS 183
            + E+ S  +  S             S  K K+PA + + S    K   KA S + + + S
Sbjct: 555  KEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKS 614

Query: 184  PSEEEN---SESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS 240
            P+E ++    E+ S +E  S +      K   ++P +     +++ K+P  + S  KA++
Sbjct: 615  PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 674

Query: 241  DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPK------- 293
                PE       A + S   + S      K P + + P ++    P   K         
Sbjct: 675  KS--PEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKT 732

Query: 294  PERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERR 353
            PE+  S    ++ S E  +  E  +  + +  E +   + E      +  E+ K   +  
Sbjct: 733  PEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEE 792

Query: 354  RERADRGEAERGSGGSSGDELREDDE-PVKKRGRKGRGRGPPSSSDSEPEAELEREAKKS 412
             +  ++ ++           L+ED + P K+  +K   + P    +   E +++   KK+
Sbjct: 793  VKSPEKAKSP----------LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKA 842

Query: 413  A--KKPQSSSTEPARKPGQKE--KRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKE 468
               K P +  TE  +   ++E  K+  P+ K + K        K S+  +   + E KK+
Sbjct: 843  EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKK 902

Query: 469  PSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRR 528
                EK      E+K   K   P  K               +++ +K  D     +  + 
Sbjct: 903  VPTPEKEAPAKVEVKEDAK---PKEK---------------TEVAKKEPDDAKAKEPSKP 944

Query: 529  YKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKE----KAE--EKLAGEELAG 582
             +  +   EK      + K     PK EA  K +   + KE    KAE  EK +  +   
Sbjct: 945  AEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKD 1004

Query: 583  EEAPQEKAEDK 593
             + P++  EDK
Sbjct: 1005 SKPPEKATEDK 1015



 Score = 70.1 bits (170), Expect = 6e-12
 Identities = 77/401 (19%), Positives = 156/401 (38%), Gaps = 21/401 (5%)

Query: 63   KCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDED 122
            K  +K   P K +  +    E   +P    +  P  + S  +A   +P       + +  
Sbjct: 633  KSPEKAKSPTKEEAKSP---EKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAK 689

Query: 123  RGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASV 182
                A + V   A S   E      K    S  K K+P  + +  K   KA S + + + 
Sbjct: 690  SPEKAKSPVKEEAKSP--EKAKSPVKEEAKSPEKAKSPVKEEA--KTPEKAKSPVKEEAK 745

Query: 183  SPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRK--KKKAPSASDSDSKADS 240
            SP + ++ E +   +  S +  TP K+ A     + P   +   K++  S   + S    
Sbjct: 746  SPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKE 805

Query: 241  DGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSS 300
            D   PE     +    S         +V VK+PP+  +  + P        PK E    S
Sbjct: 806  DAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPAT------PKTEEKKDS 859

Query: 301  SSSDSDSDEVDR--ISEWKRRDEARRRELEARRRREQEEELRRLREQEKE---EKERRRE 355
               ++   E  +  + E K     + +E +   ++E+ E+ +++   EKE   + E + +
Sbjct: 860  KKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKED 919

Query: 356  RADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKK 415
               + + E         + +E  +P +K+      +        +PE + + EAK + + 
Sbjct: 920  AKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAK-AKED 978

Query: 416  PQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEG 456
             ++ S EP++   +K ++    +++ +KP +     K ++G
Sbjct: 979  DKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKG 1019



 Score = 63.9 bits (154), Expect = 5e-10
 Identities = 89/394 (22%), Positives = 149/394 (37%), Gaps = 33/394 (8%)

Query: 283 PLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRL 342
           P   P G    P+ P  S+     S+E  ++ E        + E E     EQ EE +  
Sbjct: 419 PFSLPEGL---PKIPSVSTHIKVKSEEKIKVVE--------KSEKETVIVEEQTEETQVT 467

Query: 343 RE-QEKEEKERRRERA---DRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSD 398
            E  E+EEKE + E     + GE E   GG    E      P ++     +    P   +
Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGGEEEEAEGG----EEETKSPPAEEAASPEKEAKSPVKEE 523

Query: 399 SEPEAELEREAKKSAKKP-QSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGF 457
           ++  AE +   K+ AK P +  S E A+ P ++E +  PE K   K         +S   
Sbjct: 524 AKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEK 583

Query: 458 SMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNT 517
           +     E+ K P+  +  +K  S +K   K  SP   +     E     +V S    K+ 
Sbjct: 584 AKSPAKEEAKSPAEAKSPEKAKSPVKEEAK--SPAEAKSPVKEEAKSPAEVKSPEKAKSP 641

Query: 518 DVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAG 577
                    +     K+  +   +  + +K+    P+ +A   V       EKA+  +  
Sbjct: 642 TKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPE-KAKSPVKAEAKSPEKAKSPVKE 700

Query: 578 EELAGEEAPQE-KAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSED 636
           E  + E+A    K E K      +PV  EA +   E A+    EE +  E+      ++ 
Sbjct: 701 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTP--EKAKSPVKEEAKSPEKAKSPEKAKT 758

Query: 637 LHDVREGPDLDRPGSDRQERERARGDSEALDEES 670
           L       D+  P +    +E AR  ++   E++
Sbjct: 759 L-------DVKSPEAKTPAKEEARSPADKFPEKA 785



 Score = 39.3 bits (90), Expect = 0.012
 Identities = 83/408 (20%), Positives = 153/408 (37%), Gaps = 83/408 (20%)

Query: 302 SSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRR--LREQEKEEKERRRERADR 359
           ++D+     + I+E++R+ +AR  ELEA +  +   E +R  L ++ + +    +E   +
Sbjct: 307 NTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASYQEAIQQ 366

Query: 360 GEAE-RGSGGSSGDELREDDEPVKKR---------------GRKGR-GRGP--------- 393
            +AE R +      +LRE  + +  +               G + R G GP         
Sbjct: 367 LDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECRIGFGPIPFSLPEGL 426

Query: 394 ---PSSS---------------DSEPEAELERE--------------AKKSAK----KPQ 417
              PS S                SE E  +  E               +K AK    K +
Sbjct: 427 PKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEE 486

Query: 418 SSSTEPARKPGQKEKRVRP------EEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSV 471
               E   + G++E +  P       EK+   PVK E  +  +E  S ++  E+ K P+ 
Sbjct: 487 EGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVK-EEAKSPAEAKSPEK--EEAKSPAE 543

Query: 472 EEKLQKLHS----EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIR 527
            +  +K  S    E K   +  SP+ +   +  E     +  S   ++           +
Sbjct: 544 VKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEK 603

Query: 528 RYKANKDVMEKAAEVYTRLKSRVLGP-KIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAP 586
                K+  +  AE  + +K     P ++++ +K      E+ K+ EK    E    ++P
Sbjct: 604 AKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSP 663

Query: 587 QE-----KAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGP 629
           ++     KAE K      +PV  EA S +   +  KE  +  +  + P
Sbjct: 664 EKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSP 711



 Score = 36.2 bits (82), Expect = 0.10
 Identities = 37/216 (17%), Positives = 85/216 (39%), Gaps = 14/216 (6%)

Query: 148  KSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPE 207
            K    S +K +    ++ V +  +KA  +   A+    E+++S+     +K + +    E
Sbjct: 817  KEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEE 876

Query: 208  KKA-AVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDS 266
            KK  AV  P+   +  +K++           A+     P P   A +       +   + 
Sbjct: 877  KKEPAVEKPKESKVEAKKEE-----------AEDKKKVPTPEKEAPAKVEVKEDAKPKEK 925

Query: 267  DVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRE 326
                KK P   K A++P      ++  PE+  +        +E  +     + D+    +
Sbjct: 926  TEVAKKEPDDAK-AKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSK 984

Query: 327  LEARRRREQEEELRRLREQEKEEKERRRE-RADRGE 361
              ++ + E+ E+     +++ +  E+  E +A +G+
Sbjct: 985  EPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 1020


>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
           [Homo sapiens]
          Length = 624

 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 84/330 (25%), Positives = 138/330 (41%), Gaps = 40/330 (12%)

Query: 221 GGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPA 280
           GGR +    S S S SK+ S           R  S S   S S +   S +K  R  K  
Sbjct: 305 GGRSRSHTRSKSRSSSKSHS----------RRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 354

Query: 281 EKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELR 340
            K   K R R+    R  S        +++      K +D  + RE E  R +E+E    
Sbjct: 355 HKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 414

Query: 341 RLREQEKE-------EKERRRERADRGEAERG---SGGSSGDELREDD---EPVKKRGRK 387
           + R++E+E       EK+R RER    E +R          ++ RE D   E  +KR + 
Sbjct: 415 KDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 474

Query: 388 GRGRGPPSS------SDSEPEAELEREAKKSAKKPQSSST---EPARKPGQKEKRVRPEE 438
            + R PP S      S S       R ++ S++ P++S T   + +R P  + +  + ++
Sbjct: 475 KKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKK 534

Query: 439 KQQAKP-VKVERTRKRSEGF---SMDRKVEKKKE---PSVEEKLQKLHSEIKFALKVDSP 491
           +++ +  +   R R+RS      S DR  ++K E    S++EK      +   + +VD  
Sbjct: 535 REKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDK 594

Query: 492 DVKRC-LNALEELGTLQVTSQILQKNTDVV 520
           D  R   N ++  G  Q+  + L   T+ V
Sbjct: 595 DAPRTEENKIQHNGNCQLNEENLSTKTEAV 624



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 67/320 (20%), Positives = 119/320 (37%), Gaps = 18/320 (5%)

Query: 321 EARRRELEA--RRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDD 378
           +A  +ELE   +R RE +  +    E E  +   R+    R      S  SS    R   
Sbjct: 269 QAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKR 328

Query: 379 EPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEE 438
              K R R    R      D        ++  KS ++ +S S   +R   +K+ R + +E
Sbjct: 329 SQSKHRSRS-HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK-RKDTREKIKE 386

Query: 439 KQQAKPVKVERTRKRSE--------GFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDS 490
           K++ K    E+ R+R +        G + DR  E++K+   +++  +     K   K D 
Sbjct: 387 KERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK-DR 445

Query: 491 PDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAE-VYTRLKSR 549
              K      E+      + +I +K      +    R Y A++     + E    R +S 
Sbjct: 446 DKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSS 505

Query: 550 VLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQ 609
              P+     K   +     ++  K   +     +   E+ E + ST +    N     +
Sbjct: 506 SRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKE 565

Query: 610 KGE----SAEDKEHEEGRDS 625
           K E    S ++KEH +  DS
Sbjct: 566 KLEKNSTSLKEKEHNKEPDS 585



 Score = 39.7 bits (91), Expect = 0.009
 Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 21/226 (9%)

Query: 141 ESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTS 200
           E D + ++  +    K K         K   K      +       E+  E   + EK  
Sbjct: 392 EKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 451

Query: 201 DQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSS 260
           +QD   E++      R   +  ++KK   S +   S   S  ++       R  S SSS 
Sbjct: 452 EQDKEKEREK----DRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSR 507

Query: 261 SSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRD 320
           S  +   +        RK +  P P+ R +K K          + + D +    E +R  
Sbjct: 508 SPRTSKTIK-------RKSSRSPSPRSRNKKDK--------KREKERDHISERRERERST 552

Query: 321 EARRRELEARRRREQEEELRRLREQE--KEEKERRRERADRGEAER 364
             R+   +   + + E+    L+E+E  KE      +  D  +A R
Sbjct: 553 SMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 598



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 527 RRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAP 586
           ++   +++  +  +  ++R K +    KI+  ++V +   EKE+  EK         E  
Sbjct: 356 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREK-------EREKE 408

Query: 587 QEKAEDKPSTDLSAPVNGEATSQKGESAE-DKEHEEGRDSEE 627
           +E+ ++K   D     + E   +K    E +KEHE+ RD E+
Sbjct: 409 KERGKNK-DRDKEREKDREKDKEKDREREREKEHEKDRDKEK 449


>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
           [Homo sapiens]
          Length = 508

 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 84/330 (25%), Positives = 138/330 (41%), Gaps = 40/330 (12%)

Query: 221 GGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPA 280
           GGR +    S S S SK+ S           R  S S   S S +   S +K  R  K  
Sbjct: 189 GGRSRSHTRSKSRSSSKSHS----------RRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 238

Query: 281 EKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELR 340
            K   K R R+    R  S        +++      K +D  + RE E  R +E+E    
Sbjct: 239 HKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 298

Query: 341 RLREQEKE-------EKERRRERADRGEAERG---SGGSSGDELREDD---EPVKKRGRK 387
           + R++E+E       EK+R RER    E +R          ++ RE D   E  +KR + 
Sbjct: 299 KDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 358

Query: 388 GRGRGPPSS------SDSEPEAELEREAKKSAKKPQSSST---EPARKPGQKEKRVRPEE 438
            + R PP S      S S       R ++ S++ P++S T   + +R P  + +  + ++
Sbjct: 359 KKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKK 418

Query: 439 KQQAKP-VKVERTRKRSEGF---SMDRKVEKKKE---PSVEEKLQKLHSEIKFALKVDSP 491
           +++ +  +   R R+RS      S DR  ++K E    S++EK      +   + +VD  
Sbjct: 419 REKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDK 478

Query: 492 DVKRC-LNALEELGTLQVTSQILQKNTDVV 520
           D  R   N ++  G  Q+  + L   T+ V
Sbjct: 479 DAPRTEENKIQHNGNCQLNEENLSTKTEAV 508



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 67/320 (20%), Positives = 119/320 (37%), Gaps = 18/320 (5%)

Query: 321 EARRRELEA--RRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDD 378
           +A  +ELE   +R RE +  +    E E  +   R+    R      S  SS    R   
Sbjct: 153 QAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKR 212

Query: 379 EPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEE 438
              K R R    R      D        ++  KS ++ +S S   +R   +K+ R + +E
Sbjct: 213 SQSKHRSRS-HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK-RKDTREKIKE 270

Query: 439 KQQAKPVKVERTRKRSE--------GFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDS 490
           K++ K    E+ R+R +        G + DR  E++K+   +++  +     K   K D 
Sbjct: 271 KERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK-DR 329

Query: 491 PDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAE-VYTRLKSR 549
              K      E+      + +I +K      +    R Y A++     + E    R +S 
Sbjct: 330 DKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSS 389

Query: 550 VLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQ 609
              P+     K   +     ++  K   +     +   E+ E + ST +    N     +
Sbjct: 390 SRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKE 449

Query: 610 KGE----SAEDKEHEEGRDS 625
           K E    S ++KEH +  DS
Sbjct: 450 KLEKNSTSLKEKEHNKEPDS 469



 Score = 39.7 bits (91), Expect = 0.009
 Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 21/226 (9%)

Query: 141 ESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTS 200
           E D + ++  +    K K         K   K      +       E+  E   + EK  
Sbjct: 276 EKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 335

Query: 201 DQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSS 260
           +QD   E++      R   +  ++KK   S +   S   S  ++       R  S SSS 
Sbjct: 336 EQDKEKEREK----DRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSR 391

Query: 261 SSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRD 320
           S  +   +        RK +  P P+ R +K K          + + D +    E +R  
Sbjct: 392 SPRTSKTIK-------RKSSRSPSPRSRNKKDK--------KREKERDHISERRERERST 436

Query: 321 EARRRELEARRRREQEEELRRLREQE--KEEKERRRERADRGEAER 364
             R+   +   + + E+    L+E+E  KE      +  D  +A R
Sbjct: 437 SMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 482



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 527 RRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAP 586
           ++   +++  +  +  ++R K +    KI+  ++V +   EKE+  EK         E  
Sbjct: 240 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREK-------EREKE 292

Query: 587 QEKAEDKPSTDLSAPVNGEATSQKGESAE-DKEHEEGRDSEE 627
           +E+ ++K   D     + E   +K    E +KEHE+ RD E+
Sbjct: 293 KERGKNK-DRDKEREKDREKDKEKDREREREKEHEKDRDKEK 333


>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
          Length = 1441

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 89/359 (24%), Positives = 142/359 (39%), Gaps = 50/359 (13%)

Query: 136  ASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSE 195
            + D+ E   DS KS  N  L+R++   +  +S R  +    +D+A     +E +      
Sbjct: 990  SEDQEEKKKDSKKSKANL-LERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGVGR 1048

Query: 196  SEKTSD---------QDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKAD------- 239
             +  S               E++   + P+R     RKK++  +  DSDS  D       
Sbjct: 1049 GKDISTITGHRGKDISTILDEERKENKRPQRAAAARRKKRRRLNDLDSDSNLDEEESEDE 1108

Query: 240  ---SDGAKPEPVAMARSASSSSSSS-SSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE 295
               SDG++ E V    +   S     S+ DSD         R P+       R R+  P+
Sbjct: 1109 FKISDGSQDEFVVSDENPDESEEDPPSNDDSDTDFCSRRLRRHPSRPMRQSRRLRRKTPK 1168

Query: 296  RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEE-----K 350
            +  S    + +S+E  R SE    D+     +E RRRR +  + R++  +E  E     K
Sbjct: 1169 KKYSDDDEEEESEENSRDSESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDSESDGSQK 1228

Query: 351  ERRRERADRGEAERGSGGSSGDEL-----REDDEPVKKRGRKGRGRGPPSSSDSEPEAEL 405
              RR +  R   +R    S  +E       EDDE  K+  R  R RG  +   SE + E 
Sbjct: 1229 SLRRGKEIRRVHKRRLSSSESEESYLSKNSEDDELAKESKRSVRKRGRSTDEYSEADEEE 1288

Query: 406  EREAKKSAKK---------------PQSSSTEPARKPGQKEKRVRPEEKQQA-KPVKVE 448
            E E  K ++K                   + +PAR     + RV P E++   KP ++E
Sbjct: 1289 EEEEGKPSRKRLHRIETDEEESCDNAHGDANQPAR---DSQPRVLPSEQESTKKPYRIE 1344



 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 81/384 (21%), Positives = 139/384 (36%), Gaps = 60/384 (15%)

Query: 98  VSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKR 157
           + S  ++  E +P +     E   D   MA    + TA S         ++ S  +   +
Sbjct: 522 IHSQKAQIEEPDPPEM----ETSLDSSEMAKDLSSKTALSSTESCTMKGEEKSPKTKKDK 577

Query: 158 KTPALK-MSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFT----------- 205
           + P L+ +   ++++K   D D   +SP  EE  +S+ ESEK    +             
Sbjct: 578 RPPILECLEKLEKSKKTFLDKDAQRLSPIPEEVPKSTLESEKPGSPEAAETSPPSNIIDH 637

Query: 206 ----PEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASS----- 256
                 +K  V       +GG+  KK    +    K DS+  K E   +  + +S     
Sbjct: 638 CEKLASEKEVVECQSTSTVGGQSVKKVDLET---LKEDSEFTKVEMDNLDNAQTSGIEEP 694

Query: 257 SSSSSSSSDSDVSVKKPP--------------RGRKPAEKPLPKPRGRKPKPERPPSSSS 302
           S +  S   S    K  P                +K   K   +   RK KP+ PP    
Sbjct: 695 SETKGSMQKSKFKYKLVPEEETTASENTEITSERQKEGIKLTIRISSRKKKPDSPPKVLE 754

Query: 303 SDSDSDEVDRISEWKRRDEARRRELEARR--------RREQEEELRRLREQEKEEKERRR 354
            ++  ++ ++  E        RR     R        R ++ ++ R   E E EE+    
Sbjct: 755 PENKQEKTEKEEEKTNVGRTLRRSPRISRPTAKVAEIRDQKADKKRGEGEDEVEEESTAL 814

Query: 355 ERADRGEAERGSGGSSGDELREDDEPVKKR--GRKGRGRGPPSSSD--------SEPEAE 404
           ++ D+ E  + S   +  ++ +     K R  G + RGR   SS+D            A 
Sbjct: 815 QKTDKKEILKKSEKDTNSKVSKVKPKGKVRWTGSRTRGRWKYSSNDESEGSGSEKSSAAS 874

Query: 405 LEREAKKSAKKPQSSSTEPARKPG 428
            E E K+S +   +   EP +K G
Sbjct: 875 EEEEEKESEEAILADDDEPCKKCG 898



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 96/479 (20%), Positives = 173/479 (36%), Gaps = 99/479 (20%)

Query: 185 SEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKAD----- 239
           ++EE+   S +    ++ + T    + + + + G L   +K+ AP   D+DS        
Sbjct: 467 TKEESYSPSKDRNIITEGNGTESLNSVITSMKTGEL---EKETAPLRKDADSSISVLEIH 523

Query: 240 ---SDGAKPEPVAMARSASSS-------SSSSSSSDSDVSVK---KPPRGRKPAEKPL-- 284
              +   +P+P  M  S  SS       S ++ SS    ++K   K P+ +K    P+  
Sbjct: 524 SQKAQIEEPDPPEMETSLDSSEMAKDLSSKTALSSTESCTMKGEEKSPKTKKDKRPPILE 583

Query: 285 ---------------------------PKPRGRKPKPERPPSSSSSDSDS--DEVDRISE 315
                                      PK      KP  P ++ +S   +  D  ++++ 
Sbjct: 584 CLEKLEKSKKTFLDKDAQRLSPIPEEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKLAS 643

Query: 316 WKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELR 375
            K   E +       +  ++ +      E  KE+ E  +   D  +  + SG        
Sbjct: 644 EKEVVECQSTSTVGGQSVKKVD-----LETLKEDSEFTKVEMDNLDNAQTSG-------- 690

Query: 376 EDDEPVKKRGRKGRGRG-----PPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQK 430
             +EP + +G   + +      P   + +    E+  E +K   K     +   +KP   
Sbjct: 691 -IEEPSETKGSMQKSKFKYKLVPEEETTASENTEITSERQKEGIKLTIRISSRKKKPDSP 749

Query: 431 EKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDS 490
            K + PE KQ       E+T K  E  ++ R +  ++ P +     K+ +EI+       
Sbjct: 750 PKVLEPENKQ-------EKTEKEEEKTNVGRTL--RRSPRISRPTAKV-AEIR------- 792

Query: 491 PDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRV 550
            D K      E    ++  S  LQK TD    LK     K+ KD   K ++V  + K R 
Sbjct: 793 -DQKADKKRGEGEDEVEEESTALQK-TDKKEILK-----KSEKDTNSKVSKVKPKGKVRW 845

Query: 551 LGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKA----EDKPSTDLSAPVNGE 605
            G +     K +     +    EK +      EE   E+A    +D+P      P + E
Sbjct: 846 TGSRTRGRWKYSSNDESEGSGSEKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPE 904



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 76/352 (21%), Positives = 124/352 (35%), Gaps = 66/352 (18%)

Query: 101  SDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTP 160
            SDS   E    D     +  +D  V++      +        DSD+D  S      R+ P
Sbjct: 1096 SDSNLDEEESEDEFKISDGSQDEFVVSDENPDESEEDPPSNDDSDTDFCSRRL---RRHP 1152

Query: 161  ALKMSVSKRARKASSDL---DQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRR 217
            +  M  S+R R+ +      D      SEE + +S S+       DF   ++   R  ++
Sbjct: 1153 SRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVETRRRRSRRNQK 1212

Query: 218  GPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSS---SSSSDSDVSVKKPP 274
              +      K  S SD   K+   G +   V   R +SS S     S +S+ D   K+  
Sbjct: 1213 RQI----NYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYLSKNSEDDELAKESK 1268

Query: 275  RGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRRE 334
            R          + RGR         S+   S++DE                E E    + 
Sbjct: 1269 RS--------VRKRGR---------STDEYSEADE----------------EEEEEEGKP 1295

Query: 335  QEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPP 394
              + L R+   E+E  +        G+A + +  S    L  + E  KK          P
Sbjct: 1296 SRKRLHRIETDEEESCDNA-----HGDANQPARDSQPRVLPSEQESTKK----------P 1340

Query: 395  SSSDSEPEAELEREAKKSAKKPQSSSTEPA---RKPGQKEKRV--RPEEKQQ 441
               +S+ E + E   K  +    S    P+   + PG+  + +  +P EK Q
Sbjct: 1341 YRIESDEEEDFENVGKVGSPLDYSLVDLPSTNGQSPGKAIENLIGKPTEKSQ 1392



 Score = 37.0 bits (84), Expect = 0.059
 Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 42/253 (16%)

Query: 395 SSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKE-------------KRVRPEEKQQ 441
           S S  + E + E E  K  ++ +S   +   +P   E             K+ + +EK+ 
Sbjct: 227 SPSLEDEETKKEEETPKQEEQKESEKMKSEEQPMDLENRSTANVLEETTVKKEKEDEKEL 286

Query: 442 AK-PVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCL--- 497
            K PV V+  +   E  + ++K+ K++  S +E ++ +  E+K   + D  D K  +   
Sbjct: 287 VKLPVIVKLEKPLPE--NEEKKIIKEESDSFKENVKPIKVEVK-ECRADPKDTKSSMEKP 343

Query: 498 -----NALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLG 552
                  +E  G ++ + +I +K+T+    LK  ++ K    + ++  ++     S V G
Sbjct: 344 VAQEPERIEFGGNIKSSHEITEKSTEETEKLKNDQQAKI--PLKKREIKLSDDFDSPVKG 401

Query: 553 PKIEAVQKVNKAGMEKEKAEEKLA------------GEELAGEEAPQEKAEDKPSTDLSA 600
           P  ++V    +   ++ K EE+              G++L   E   E+      T+   
Sbjct: 402 PLCKSVTPTKEFLKDEIKQEEETCKRISTITALGHEGKQLVNGEVSDERVAPNFKTE--- 458

Query: 601 PVNGEATSQKGES 613
           P+  +    K ES
Sbjct: 459 PIETKFYETKEES 471


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 82/382 (21%), Positives = 147/382 (38%), Gaps = 45/382 (11%)

Query: 133 ATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSES 192
           A+    + + D + +   + S L R+      S+ KR    +S   + S S + E + +S
Sbjct: 409 ASPVQKKEKKDKERENEKEKSALARER-----SLKKRQSLPASPRARLSASTASELSPKS 463

Query: 193 SSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMAR 252
            +     S    T   + A   P  GP G     K PS   + +       + E    + 
Sbjct: 464 KARPSSPS----TSWHRPASPCPSPGP-GHTLPPKPPSPRGTTASPKGRVRRKEEAKESP 518

Query: 253 SASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDS------- 305
           SA+     S S     + K+      PA  P P P    P+ E+PP+ + +D+       
Sbjct: 519 SAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPP 578

Query: 306 ----------------DSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQE--K 347
                           D +E  R+   KRR    +RE E + RR Q E  +R+RE++  +
Sbjct: 579 APAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAR 638

Query: 348 EEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELER 407
           E + R    A+    E           +E+ E ++K+  +   R    +     E E   
Sbjct: 639 EAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHF 698

Query: 408 EAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAK--------PVKVERTRKRSEGFSM 459
           + ++  ++ +    E   K  +K +    ++KQ +K        P  V+    RS G  +
Sbjct: 699 QQQEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPG--L 756

Query: 460 DRKVEKKKEPSVEEKLQKLHSE 481
            ++  +K+EP  +E    L S+
Sbjct: 757 QKEAVQKEEPIPQEPQWSLPSK 778



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 49/278 (17%), Positives = 108/278 (38%), Gaps = 34/278 (12%)

Query: 171 RKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPS 230
           RK  +    ++  P ++  S+  + +EK S    +P    A       P    +K++ P+
Sbjct: 510 RKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPP----QKEQPPA 565

Query: 231 ASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKK----PPRGRKPAEKPLPK 286
            + +D+   +    P P        + ++    +   ++ K+      R R+  E+ L  
Sbjct: 566 ETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQA 625

Query: 287 PRGRKPKPER--------------------PPSSSSSDSDSDEVDRISEWKR------RD 320
            R ++ + E+                      +   + ++ +E +R+ + K       R+
Sbjct: 626 ERDKRMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSRE 685

Query: 321 EARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEP 380
           EA R+ LE  +  +Q+E+ R+ R +  EE  +R  +++  E ++       +      EP
Sbjct: 686 EAERQRLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEP 745

Query: 381 VKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQS 418
           VK    +  G    +    EP  +  + +  S + P S
Sbjct: 746 VKAVEARSPGLQKEAVQKEEPIPQEPQWSLPSKELPAS 783



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 14/136 (10%)

Query: 226 KKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLP 285
           K A S+     + +S   +  P    R A     S SS         P  G + A  P  
Sbjct: 56  KNATSSKQLPLEPESPSGQVGP----RPAPPQEESPSSEAKSRGPTPPAMGPRDARPPR- 110

Query: 286 KPRGRKPKPERPPSSSSSDSDSDEVDRISEW----KRRDEARRRELEARRR--REQEEEL 339
             R  +P P   P+S S  +   EV +  E     K R E R + L A++    E+EE+ 
Sbjct: 111 --RSSQPSPTAVPASDSPPT-KQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKA 167

Query: 340 RRLREQEKEEKERRRE 355
           + LRE++ +E+ RR E
Sbjct: 168 KALREKQLQERRRRLE 183



 Score = 35.4 bits (80), Expect = 0.17
 Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 25/236 (10%)

Query: 262 SSSDSDVSVKKPPR--GRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRR 319
           S   +++    PP    R P E P P P G    P  P S+   D+  D    +   K  
Sbjct: 3   SGPRAELGAGAPPAVVARTPPE-PRPSPEGDPSPPPPPMSALVPDTPPDTPPAM---KNA 58

Query: 320 DEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEA--------ERGSGGSSG 371
             +++  LE      Q    R    QE+      + R     A         R S   S 
Sbjct: 59  TSSKQLPLEPESPSGQVGP-RPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSP 117

Query: 372 DELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKE 431
             +   D P  K+  K  G     + +   E      AKK+    +    +  R+   +E
Sbjct: 118 TAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQE 177

Query: 432 KRVRPEEK----QQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIK 483
           +R R EE+    +Q +    ER R++ E      K +++ E +++  ++K  +EI+
Sbjct: 178 RRRRLEEQRLKAEQRRAALEERQRQKLE------KNKERYEAAIQRSVKKTWAEIR 227



 Score = 34.3 bits (77), Expect = 0.38
 Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 23/160 (14%)

Query: 206 PEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSD 265
           PE  +    PR  P         P      S+A S G  P P    R A     SS  S 
Sbjct: 68  PESPSGQVGPRPAP---------PQEESPSSEAKSRGPTP-PAMGPRDARPPRRSSQPSP 117

Query: 266 SDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEA--- 322
           + V     P  ++  +K   + +  K + E      ++          + W  ++E    
Sbjct: 118 TAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKK--------AVWLEKEEKAKA 169

Query: 323 -RRRELEARRRREQEEELRRLREQEKEEKERRRERADRGE 361
            R ++L+ RRRR +E+ L+  + +   E ER+R++ ++ +
Sbjct: 170 LREKQLQERRRRLEEQRLKAEQRRAALE-ERQRQKLEKNK 208


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 95/487 (19%), Positives = 191/487 (39%), Gaps = 68/487 (13%)

Query: 197 EKTSDQDFTPEKKAAVRAPRRGPLGG-------------------RKKKKAPSASDSDSK 237
           E T   DF+  +  +  +PRR  LG                    R+++K  +  ++D K
Sbjct: 19  EVTIPLDFSRRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRK 78

Query: 238 ADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERP 297
            +    K       R            +     ++  +  K   +   + R  + + ER 
Sbjct: 79  RERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERG 138

Query: 298 PSSSSSDSDSDEVDRISEWKRR---DEARRRELEARRRREQEEELRRLREQEKEEKERRR 354
               +      E  R +E +R    D  R+R+ E  R++E+E E  R   QE+ E+ER+R
Sbjct: 139 RDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNR---QERRERERQR 195

Query: 355 ERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAK 414
           E+ ++ E      G   +  RE +   +++ +  R R        + + + ERE +K A+
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRER--------DRQRKTEREREKQAE 247

Query: 415 KPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERT-RKRSEGFSMDRKVEKKKEPSVEE 473
           + ++S  E  R   ++ +R R  ++ + +  +  +T RKR      DR+ E+K+E   E 
Sbjct: 248 RERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRER 307

Query: 474 KLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANK 533
           + ++  +  +   +    + +R                  Q+ T+     ++ R+ K   
Sbjct: 308 ERERERNRKRERERERERERER------------------QRETERDREKERERKRKRQT 349

Query: 534 DVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDK 593
           ++         R ++R  G       +  +   E+E+  E+    + A E   +E+  D+
Sbjct: 350 EM--------DRERNRQTG-------REGRRQAERERERERERDRQSAREREERERDRDR 394

Query: 594 PSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDR 653
                      +    + E+ + +E E+ R+SE G   G   +    RE  D +R    +
Sbjct: 395 DRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRE-RDRERQTDRQ 453

Query: 654 QERERAR 660
             R+R R
Sbjct: 454 AGRQRKR 460



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 80/351 (22%), Positives = 155/351 (44%), Gaps = 32/351 (9%)

Query: 141 ESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLD-QASVSPSEEENSESSSESEKT 199
           E +   D+ +D    +R+    + +  +R R+   +   Q   +  +E   E + +  + 
Sbjct: 134 EGERGRDRQTDG---QRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRE 190

Query: 200 SDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSS 259
            ++    E K   R   RG     ++++  + ++++ K  +D  +       R     + 
Sbjct: 191 RERQREKENKTEDRHSERGR---ERERERETETETERKRQTDRERDRQRKTEREREKQAE 247

Query: 260 SSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKR- 318
              +S+ +    K     +  E+   + R R+ K ER   +        E DR +E KR 
Sbjct: 248 RERASERETERDK----ERERERDRDRDRDRRQK-ERERQTDRKRQRRTERDRETERKRE 302

Query: 319 RDEARRRELEARRRREQEEELRRLREQEKE-------EKERRRERADRGEAERGSGGSSG 371
           R   R RE E  R+RE+E E  R RE+++E       E+ER+R+R  + E +R     +G
Sbjct: 303 RQRERERERERNRKRERERERERERERQRETERDREKERERKRKR--QTEMDRERNRQTG 360

Query: 372 DELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKE 431
            E R   E  ++R R+   R   S+ + E   E ER+  +  +K +   TE  R  GQ+E
Sbjct: 361 REGRRQAERERERERE---RDRQSARERE---ERERDRDRDRQKERERQTEKDR-DGQRE 413

Query: 432 ---KRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLH 479
              +R R ++++  +  +  R R++ +G   DR+ +  ++   + K   L+
Sbjct: 414 TEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLY 464



 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 69/340 (20%), Positives = 138/340 (40%), Gaps = 6/340 (1%)

Query: 141 ESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENS-ESSSESEKT 199
           E +  +D+  D    K +    K    +  R+     D+ +    E E   ++  E E+ 
Sbjct: 104 ERERQTDRERDRQREKERNRQ-KERERETEREGERGRDRQTDGQRERERQRDAEKERERQ 162

Query: 200 SDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSS 259
           +D++   + +   +  R      +++++     + ++K + D          R   + + 
Sbjct: 163 TDRERQRQTERNRQKEREREKNRQERRERERQREKENKTE-DRHSERGRERERERETETE 221

Query: 260 SSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRR 319
           +     +D    +  +  +  EK   + R  + + ER            + DR  + + R
Sbjct: 222 TERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERER 281

Query: 320 DEARRRELEARRRREQEEELRRLREQEKE-EKERRRERADRGEAER-GSGGSSGDELRED 377
              R+R+    R RE E +  R RE+E+E E+ R+RER    E ER     +  D  +E 
Sbjct: 282 QTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKER 341

Query: 378 DEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPE 437
           +   K++    R R   +  +   +AE ERE ++   + QS+     R+  +   R +  
Sbjct: 342 ERKRKRQTEMDRERNRQTGREGRRQAERERERERERDR-QSAREREERERDRDRDRQKER 400

Query: 438 EKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQK 477
           E+Q  K    +R  ++      DR+ E+ +E   E + QK
Sbjct: 401 ERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQK 440



 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 76/363 (20%), Positives = 145/363 (39%), Gaps = 31/363 (8%)

Query: 115 DADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKAS 174
           DAD DD +R              +R      +++ +D    KR+    K    KR R   
Sbjct: 48  DADGDDRERN--------RQKERERRREKRQTERETDR---KRERRREKDRHRKRDRHRE 96

Query: 175 SDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDS 234
              D+      +E   ++  E ++  +++   +K+      R G  G  ++       + 
Sbjct: 97  RQRDR-----EKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERER 151

Query: 235 DSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKP-PRGRKPAEKPLPKPRGRKPK 293
              A+ +  +       R    +       + +   ++   R R+   K   +   R  +
Sbjct: 152 QRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRE 211

Query: 294 PERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERR 353
            ER   + +      + DR  + +R+ E R RE +A R R  E E  R +E+E+E ++R 
Sbjct: 212 RERERETETETERKRQTDRERDRQRKTE-REREKQAERERASERETERDKERERE-RDRD 269

Query: 354 RERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSA 413
           R+R DR + ER          R+ D   K++ R  R R      + + E E ERE  +  
Sbjct: 270 RDR-DRRQKERE---------RQTDR--KRQRRTERDRETERKRERQRERERERERNRKR 317

Query: 414 KKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEE 473
           ++ +    E  R+   +  R +  E+++ +  +++R R R  G    R+ E+++E   E 
Sbjct: 318 ERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERER 377

Query: 474 KLQ 476
             Q
Sbjct: 378 DRQ 380



 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 56/289 (19%), Positives = 115/289 (39%), Gaps = 18/289 (6%)

Query: 141 ESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENS---ESSSESE 197
           E ++ ++      G +R+      + ++R R+   + D+   +  E E     E +SE E
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERE 255

Query: 198 KTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSS 257
              D++   E+       RR     +K+++  +      + + D          R     
Sbjct: 256 TERDKERERERDRDRDRDRR-----QKERERQTDRKRQRRTERDRETERKRERQRERERE 310

Query: 258 SSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWK 317
              +   + +   ++    ++  E+   K R RK K +       ++ D +   +     
Sbjct: 311 RERNRKRERERERERERERQRETERDREKERERKRKRQ-------TEMDRERNRQTGREG 363

Query: 318 RRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAER-GSGGSSGDELRE 376
           RR   R RE E  R R+   E R  RE++++ ++R++ER  + E +R G   +     RE
Sbjct: 364 RRQAERERERERERDRQSARE-REERERDRD-RDRQKERERQTEKDRDGQRETEKQRERE 421

Query: 377 DDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPAR 425
            D   ++   +GR R      + + E + +R+A +  K+       P R
Sbjct: 422 KDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPR 470



 Score = 36.2 bits (82), Expect = 0.10
 Identities = 51/296 (17%), Positives = 101/296 (34%), Gaps = 49/296 (16%)

Query: 141 ESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTS 200
           E D D D+       +R+T   +   ++R R+     ++       E   E + + E+  
Sbjct: 265 ERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQR---ERERERERNRKRERER 321

Query: 201 DQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSS 260
           +++   E++      R      ++K++     + + +   +G         R A      
Sbjct: 322 ERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGR--------RQAERERER 373

Query: 261 SSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRD 320
               D   + ++  R R   ++   K R R+ + +R     +      E DR SE + R+
Sbjct: 374 ERERDRQSAREREERERD-RDRDRQKERERQTEKDRDGQRETEKQREREKDRESE-RGRE 431

Query: 321 EARRRELEARRRREQEEELRRLREQEK--------------------------------- 347
             R RE +  R R++E +  R   +++                                 
Sbjct: 432 RGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWK 491

Query: 348 ---EEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSE 400
              E+ +    R   G   + S G      R +    +KRG+ G GR P     +E
Sbjct: 492 SSPEDPKAASTRFPWGRPAKASRGRVAGRRRWEPRLGEKRGQGGEGRRPSGGFGTE 547


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 12/188 (6%)

Query: 290 RKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEE 349
           ++ K ER         + ++  R  E +R+ E  ++E +  R++E+ E  +R RE+E +E
Sbjct: 49  KEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKE 108

Query: 350 KERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREA 409
            E + +R  + + ERG     G E RE  E  K+  RK R R        E E E ER+ 
Sbjct: 109 GEEKEKRKKKEKKERGRTSKEGKE-RERKEERKREERKERER-----KKEEREKERERKE 162

Query: 410 KKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEP 469
           +K  ++ Q    E  RK  +KE++ R + ++  K  K ER RK       +RK E+KK+ 
Sbjct: 163 RKKRERKQVGEKEEERK--EKERKERKKRERNRKERKKERERKERR----ERKKERKKKE 216

Query: 470 SVEEKLQK 477
             +++ QK
Sbjct: 217 ERKKERQK 224



 Score = 80.1 bits (196), Expect = 6e-15
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 7/168 (4%)

Query: 317 KRRDEARRRELEARRRREQEEELRRLREQEKEEK--ERRRERADRGEAERGSGGSSGDEL 374
           K R+  R++E   R +R++E E  R RE+ K+EK  ER++E  +R +  R      G   
Sbjct: 53  KERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEG--- 109

Query: 375 REDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKS-AKKPQSSSTEPARKPGQKEKR 433
            E+ E  KK+ +K RGR      + E + E +RE +K   +K +    E  RK  +K +R
Sbjct: 110 -EEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRER 168

Query: 434 VRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSE 481
            +  EK++ +  K  + RK+ E    +RK E++++   E K ++   E
Sbjct: 169 KQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKE 216



 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 12/181 (6%)

Query: 271 KKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEAR 330
           +K  RG+K  EK   + +  + + +R     + + +  E  +  E K R    +   E  
Sbjct: 77  RKRERGKK--EKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERE 134

Query: 331 RRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRG 390
           R+ E++ E R+ RE++KEE+E+ RER +R + ER   G   +E +E +   +K+  + R 
Sbjct: 135 RKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNR- 193

Query: 391 RGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERT 450
                    E E +  RE KK  KK      E  +K  QK+++    EK++ K  + ER 
Sbjct: 194 ----KERKKERERKERRERKKERKK-----KEERKKERQKDRQTNWREKERGKRERKERK 244

Query: 451 R 451
           +
Sbjct: 245 K 245



 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 4/184 (2%)

Query: 186 EEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKP 245
           +E  SE   E  +   +    EK+      ++   G RKK++         K + +G + 
Sbjct: 53  KERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEK 112

Query: 246 EPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDS 305
           E            +S    + +   ++    RK  E+   +    + + ER         
Sbjct: 113 EKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVG 172

Query: 306 DSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADR----GE 361
           + +E  +  E K R +  R   E ++ RE++E   R +E++K+E+ ++  + DR     E
Sbjct: 173 EKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWRE 232

Query: 362 AERG 365
            ERG
Sbjct: 233 KERG 236



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 26/171 (15%), Positives = 66/171 (38%)

Query: 186 EEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKP 245
           E+E      + EK  ++     ++   R  +    G  K+K+         +   +G + 
Sbjct: 74  EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKER 133

Query: 246 EPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDS 305
           E     +            + +   ++  R ++  ++   K   RK K  +       + 
Sbjct: 134 ERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNR 193

Query: 306 DSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRER 356
              + +R  + +R  +  R++ E R++  Q++     RE+E+ ++ER+  +
Sbjct: 194 KERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERK 244



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 15/215 (6%)

Query: 379 EPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEE 438
           +P  + G +   R      ++  E + ERE+++  ++ +    +  R+  +K +R + E+
Sbjct: 27  KPCTQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEK 86

Query: 439 KQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLN 498
           K + K  K ER RK+      +++ E+K++   +EK ++  +  +   +    + KR   
Sbjct: 87  KGERK--KEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKR--- 141

Query: 499 ALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAV 558
             EE    +   +  +K  +     +K R+ +  K V EK  E   + K R    K E  
Sbjct: 142 --EERKERERKKEEREKERE-----RKERKKRERKQVGEKEEE--RKEKERKERKKRERN 192

Query: 559 QKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDK 593
           +K  K   E+++  E+   E    EE  +E+ +D+
Sbjct: 193 RKERKKERERKERRER-KKERKKKEERKKERQKDR 226



 Score = 38.9 bits (89), Expect = 0.016
 Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 51/257 (19%)

Query: 402 EAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDR 461
           E E E E +K  KK + S  +  R+  +K KR R            E+ RKR  G     
Sbjct: 40  EREREIETRKEGKKERESERKKERREREKRKRER------------EKERKRERG----- 82

Query: 462 KVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVA 521
           K EKK E   EE+ +K     K                               +N +   
Sbjct: 83  KKEKKGERKKEERERKKRRREK-------------------------------ENKEGEE 111

Query: 522 TLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELA 581
             K+ ++ K  +    K  +   R + R    + E  +K  +   E+E+ E K    +  
Sbjct: 112 KEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQV 171

Query: 582 GEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVR 641
           GE+  + K +++         N +   ++ E  E +E ++ R  +E  +    +D     
Sbjct: 172 GEKEEERKEKERKERK-KRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQ--T 228

Query: 642 EGPDLDRPGSDRQERER 658
              + +R   +R+ER++
Sbjct: 229 NWREKERGKRERKERKK 245



 Score = 33.5 bits (75), Expect = 0.65
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 25/145 (17%)

Query: 524 KKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELA-- 581
           KK R  +  K+  E+      R K R    K E  +K  K   +KE+ E K    E    
Sbjct: 52  KKERESERKKERREREKRKREREKER----KRERGKKEKKGERKKEERERKKRRREKENK 107

Query: 582 -GEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDV 640
            GEE  + K ++K             TS++G+  E KE  +  + +E  R          
Sbjct: 108 EGEEKEKRKKKEKKERG--------RTSKEGKERERKEERKREERKERER---------K 150

Query: 641 REGPDLDRPGSDRQERERAR-GDSE 664
           +E  + +R   +R++RER + G+ E
Sbjct: 151 KEEREKERERKERKKRERKQVGEKE 175


>gi|217330641 IWS1 homolog [Homo sapiens]
          Length = 819

 Score = 79.7 bits (195), Expect = 8e-15
 Identities = 98/430 (22%), Positives = 174/430 (40%), Gaps = 43/430 (10%)

Query: 72  NKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAV 131
           N+     +GL +  +   +    P  +++SDSE+ E +     D+D + E+R        
Sbjct: 51  NETSDREDGLPKGHHVTDSENDEPLNLNASDSESEELHRQ--KDSDSESEERA------- 101

Query: 132 TATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASV-----SPSE 186
               ASD    D +   S   S   RK P       +     +SD +   V     S SE
Sbjct: 102 -EPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSE 160

Query: 187 EENSESSSESEKTSDQDFTPE-KKAAVRAPRRGPLGGRKKKKAPSASDSDSKAD------ 239
            E  + S  S+  ++    P+   +    P R      + ++ P    SDS+++      
Sbjct: 161 IEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQ 220

Query: 240 -SDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKP--AEKPLPKPRGRKPKPER 296
            SD    EP     S S +        SD   + PPR +      + LPKPR    + E 
Sbjct: 221 VSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESED 280

Query: 297 PPSSSSSDSDSDEV------DRISEWKRRDEARRRELE--ARRRREQEEELRRLREQEKE 348
           PP + +SDS+++E+      D  SE  ++  A   E E  +R +++ E +    RE + E
Sbjct: 281 PPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGE 340

Query: 349 EKERRRER-ADRGEAERGSGGSSGDELRE------DDEPVKKRGRKGRGRGPPSSSDSEP 401
           + E + +        +R    SS  E  E      D +  +K G + +     ++  S+ 
Sbjct: 341 DTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDS 400

Query: 402 EAELEREAKKS---AKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFS 458
           E E +  AKKS   +    S S   + K G++EK +  + +++A     ++  +  + F 
Sbjct: 401 EDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFG 460

Query: 459 MDRKVEKKKE 468
            D +   ++E
Sbjct: 461 SDSESGNEEE 470


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 121/551 (21%), Positives = 230/551 (41%), Gaps = 69/551 (12%)

Query: 139  RMESDSDSDKSSDNSG-LKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESE 197
            ++ES++D+ +S   S   K++    +    ++ R+  S+L        +EE      + E
Sbjct: 707  QLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQW------QEEERAHRQQQE 760

Query: 198  KTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSS 257
            +   +DFT + +A  ++ R     GR++  A               + +     R+    
Sbjct: 761  EEQRRDFTWQWQAEEKSER-----GRQRLSARPP-----------LREQRERQLRAEERQ 804

Query: 258  SSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDS----DEVDRI 313
                     +   ++  R R+  EK L      +    R  +    + +     D+  R 
Sbjct: 805  QREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRR 864

Query: 314  SEWKRRDEARRRELEARRRREQ---------EEELRRLRE--QEKEEKERRRERADRGEA 362
            S+ +RRD+  R +LE  R+R +         +E+LR+ ++  QE+EE+ +R ER  R   
Sbjct: 865  SQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQ 924

Query: 363  ERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTE 422
            E+       ++L++++E + +  R+ R R        E E +  ++ K   K+ Q    E
Sbjct: 925  EQERQYREEEQLQQEEEQLLREEREKRRR-------QERERQYRKDKKLQQKEEQLLGEE 977

Query: 423  P-ARKPGQKEKRVRPEEK-QQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480
            P  R+  ++EK+ R EE+ QQ +   +   R++      +R+  KK E   EE+ Q L  
Sbjct: 978  PEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEE-QLLRE 1036

Query: 481  EIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA 540
            E +   K    + +R     EEL   Q   Q+L +  +     +  R+Y+  +++ ++  
Sbjct: 1037 ERE---KRRLQERERQYREEEEL--QQEEEQLLGEERETRRRQELERQYRKEEELQQEEE 1091

Query: 541  EVYTRLKSRVLGPKIEAVQKVNKAGMEKE-KAEEKLAGEELAGEEAPQEKAEDKPSTDLS 599
            ++             E  +K  +   E++ + EE+L  EE   E+  +E+ E +   +L 
Sbjct: 1092 QLLR-----------EEPEKRRRQERERQCREEEELQQEE---EQLLREEREKRRRQELE 1137

Query: 600  APVNGEATSQKGESAEDKEHEEGRDSEEGPR-CGSSEDLHDVREGPDLDRPGSDRQERER 658
                 E   Q+ E    +E  E R  +E  R     E+L    E    +     RQERER
Sbjct: 1138 RQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERER 1197

Query: 659  ARGDSEALDEE 669
               + E L  +
Sbjct: 1198 QYREEEELQRQ 1208



 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 88/413 (21%), Positives = 170/413 (41%), Gaps = 34/413 (8%)

Query: 277  RKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRIS------EWKRRDEARRRELEAR 330
            R+  E+ L +   R+ + ER     + +      +RI       +W+   EA  R+ +  
Sbjct: 661  REEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVY 720

Query: 331  RRREQEEELRRLREQEKEEKERRRE-RADRGEAERGSGGSSGDELRED------DEPVKK 383
             R  ++E  RR   QE+EEK RRRE      E ER       +E R D       E   +
Sbjct: 721  SRPRKQEGQRR--RQEQEEKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQAEEKSE 778

Query: 384  RGRKGRGRGPPSSSDSE----PEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEK 439
            RGR+     PP     E     E   +RE +   ++ +       R+  +KE +   EE+
Sbjct: 779  RGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEE 838

Query: 440  QQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNA 499
            Q  +  + ++ ++  +G   D++  + +E       Q+   + ++ L+ +    +  L A
Sbjct: 839  QLQRRERAQQLQEEEDGLQEDQERRRSQE-------QRRDQKWRWQLEEERKRRRHTLYA 891

Query: 500  LEEL-GTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAV 558
               L   L+   Q+LQ+  + +   ++ +R +  ++   +  E   + + ++L  + E  
Sbjct: 892  KPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKR 951

Query: 559  QKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKE 618
            ++  +    ++  + +   E+L GEE  + + +++           E   Q+ E    +E
Sbjct: 952  RRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQER-----EKKYREEEELQQEEEQLLRE 1006

Query: 619  HEEGRDSEEGPRCGSSEDLHDVREGPDL--DRPGSDRQERERARGDSEALDEE 669
              E R  +E  R    +D     E   L  +R     QERER   + E L +E
Sbjct: 1007 EREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQE 1059



 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 76/373 (20%), Positives = 146/373 (39%), Gaps = 18/373 (4%)

Query: 290 RKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEE 349
           R+ + ER       +     + R  E +R    R  E E   +  ++++L+R +E+E+ E
Sbjct: 427 REQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRE 486

Query: 350 KERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREA 409
           +  + E  +R E +         E  E  E   KR  +         S+ +   E E   
Sbjct: 487 RWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERR 546

Query: 410 KKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEP 469
           ++  K+ +    E  R+  Q+ KR + E + Q    + ER ++R +    +R  ++ K  
Sbjct: 547 EQLLKREEEKRLEQERRE-QRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKRE 605

Query: 470 SVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRR- 528
            VE   Q+   E +  LK + P+ +R               Q+L+         +++RR 
Sbjct: 606 EVERLEQEERREQR--LKREEPEEER-------------RQQLLKSEEQEERRQQQLRRE 650

Query: 529 YKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQE 588
            +  ++   K  E   RL+ R+     E  ++   A  E+E+A E++       +   + 
Sbjct: 651 QQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLES 710

Query: 589 KAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGR-DSEEGPRCGSSEDLHDVREGPDLD 647
           +A+ + S   S P   E   ++ E  E +   E     +E  R    +   + R      
Sbjct: 711 EADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQ 770

Query: 648 RPGSDRQERERAR 660
               ++ ER R R
Sbjct: 771 WQAEEKSERGRQR 783



 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 91/449 (20%), Positives = 188/449 (41%), Gaps = 64/449 (14%)

Query: 274 PRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEV----DRI----------SEWKRR 319
           PR R+  E+P  + R ++ + ER  +     S+  E     DR            EW+ R
Sbjct: 124 PRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQER 183

Query: 320 DEARRRE--LEARRRREQEE----------ELRRLREQEKEEK-ERRRERADRGEAERGS 366
           +E R  E  L++ +  E EE          EL  LR + +EEK ++RRER DR   E   
Sbjct: 184 EERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQE--- 240

Query: 367 GGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAE----LEREAKKSAKKPQSSSTE 422
                 E R+ +  ++K   K +   P    + + E E    LER+  +  ++ +    +
Sbjct: 241 --EEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQ 298

Query: 423 PARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEI 482
             R+  Q  ++   E ++Q +  + ++ R+  +    ++++ +++E   E++L++   E 
Sbjct: 299 RLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEE 358

Query: 483 K--FALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAA 540
           +    L+ +  + +R      E    Q+  +   +    +   +++RR +  +   +   
Sbjct: 359 RREQQLRREQEEERREQQLRRE---QQLRREQQLRREQQLRREQQLRREQQLRREQQLRR 415

Query: 541 EVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEE------LAGEEAPQEKAEDKP 594
           E   R + ++   + E  ++ ++   E+E+ E++L  E+      L  EE  +   +++ 
Sbjct: 416 EQQLRREQQL---RREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERR 472

Query: 595 STDLSAPVNGE--------ATSQKGESAEDKEHEEGRDSEEG-----PRCGSSEDLHD-V 640
              L      E           ++ E  E +E +  R+ EE       R    E L   +
Sbjct: 473 KQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRL 532

Query: 641 REGPDLDRPGSDRQERERARGDSEALDEE 669
           R    L R   +R+E+   R + + L++E
Sbjct: 533 RSEQQLRREQEERREQLLKREEEKRLEQE 561



 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 89/504 (17%), Positives = 194/504 (38%), Gaps = 75/504 (14%)

Query: 186  EEENSESSSESEKTSDQD--------FTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSK 237
            EEE  +     ++  D+D        + PEK+ AVR                     D+K
Sbjct: 1201 EEEELQRQKRKQRYRDEDQRSDLKWQWEPEKENAVR---------------------DNK 1239

Query: 238  ADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK-----PRGRKP 292
                G + E       +      S      +  ++  R R+   +   +     P   + 
Sbjct: 1240 VYCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQL 1299

Query: 293  KPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRRE----QEEELRRLREQEKE 348
            + E    +   D  S E  ++   +R ++ RR+E + + R E    QE E + LR QE++
Sbjct: 1300 EREEQKEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERD 1359

Query: 349  EKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSS---SDSEPEAEL 405
             K R  E   +           G +  E+++ ++++ R+ +           + E +   
Sbjct: 1360 RKFREEELRHQ---------EQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQLRQ 1410

Query: 406  EREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEK 465
            +R+ K   ++ Q S  E  RK  ++E++VR +E++  +    E  + R E     R+ E+
Sbjct: 1411 DRDRKFREEEQQLSRQERDRKFREEEQQVRRQERE--RKFLEEEQQLRQERHRKFREEEQ 1468

Query: 466  KKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKK 525
              +   E++L +   + KF                     L+   Q+ ++  D     ++
Sbjct: 1469 LLQEREEQQLHRQERDRKF---------------------LEEEQQLRRQERDRKFREQE 1507

Query: 526  IRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEA 585
            +R  +  +  +E+  +++ + + R    + + +++  +    ++  + K   EE   +E 
Sbjct: 1508 LRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQER 1567

Query: 586  PQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPD 645
             +E+   +   D    +  +   ++ +  +  E E+    +EG +    E     RE   
Sbjct: 1568 -EEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQ 1626

Query: 646  LDRPGSDRQERERARGDSEALDEE 669
            L +   + Q+  R   D + L+EE
Sbjct: 1627 LLQE-REEQQLHRQERDRKFLEEE 1649



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 69/389 (17%), Positives = 167/389 (42%), Gaps = 44/389 (11%)

Query: 291 KPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEK 350
           K + E P        + +++ ++   + R E R+ E + ++R  +E++LRR  +QE+E +
Sbjct: 259 KLQEEEPQRQRELQEEEEQLRKLERQELRRE-RQEEEQQQQRLRREQQLRR--KQEEERR 315

Query: 351 ERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAK 410
           E++ ER ++ E           +LR + E  +++  +          +   E +L RE +
Sbjct: 316 EQQEERREQQERREQQEERREQQLRREQEERREQQLR------REQEEERREQQLRREQE 369

Query: 411 KSAKKPQSSSTEPARKPGQ--KEKRVRPEEK-QQAKPVKVERTRKRSEGFSMDRKVEKKK 467
           +  ++ Q    +  R+  Q  +E+++R E++ ++ + ++ E+  +R +    ++++ +++
Sbjct: 370 EERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQ 429

Query: 468 EPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIR 527
           E   EE+ ++ H + +   ++     +R                 L++  +     ++ R
Sbjct: 430 E---EERHEQKHEQERREQRLKREQEER--------------RDWLKREEETERHEQERR 472

Query: 528 RYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGME-------KEKAEEKLAGEEL 580
           + +  +D  E+  E + +L+      + E  ++  +   E       K + EE+   + L
Sbjct: 473 KQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRL 532

Query: 581 AGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDV 640
             E+  + + E++    L          ++ E    +E EE RD              + 
Sbjct: 533 RSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRD--------QLLKREEE 584

Query: 641 REGPDLDRPGSDRQERERARGDSEALDEE 669
           R    L R   +R E+   R + E L++E
Sbjct: 585 RRQQRLKREQEERLEQRLKREEVERLEQE 613



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 78/376 (20%), Positives = 162/376 (43%), Gaps = 40/376 (10%)

Query: 308 DEVDRISEWKRRDEARRRELEARRR-----REQEE----ELRRLREQEKEEKERRRERAD 358
           +E  R  + +RR++  RRE +  RR     REQEE    +LRR +E+E+ E++ RRE+  
Sbjct: 311 EEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQ-- 368

Query: 359 RGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELERE-----AKKSA 413
             E ER       ++    ++ +++  +  R +          E +L RE      ++  
Sbjct: 369 --EEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLR 426

Query: 414 KKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEE 473
           ++ +    E   +  ++E+R++ E++++   +K E   +R E     +++++ +E    E
Sbjct: 427 REQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRE 486

Query: 474 KLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANK 533
           +  KL  E +   +      ++ L   +E    +   Q L++  +     +++R  +  +
Sbjct: 487 RWLKLEEEER---REQQERREQQLRREQE----ERREQRLKRQEEEERLQQRLRSEQQLR 539

Query: 534 DVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDK 593
              E+  E   +L  R    ++E  ++  +   E+E+  ++L   E   EE  Q++ + +
Sbjct: 540 REQEERRE---QLLKREEEKRLEQERREQRLKREQEERRDQLLKRE---EERRQQRLKRE 593

Query: 594 PSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDL-----HDVREGPDLDR 648
               L   +  E      E  E +E  E R   E P     + L      + R    L R
Sbjct: 594 QEERLEQRLKREEV----ERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRR 649

Query: 649 PGSDRQERERARGDSE 664
              +R+E+   R + E
Sbjct: 650 EQQERREQRLKREEEE 665



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 79/404 (19%), Positives = 169/404 (41%), Gaps = 49/404 (12%)

Query: 289  GRKPKPERPPSSSSSDSDSDEVDRISEW---KRRDEARRRELEARRRRE---QEEELRRL 342
            G +P+  R         + +E+ +  E    + R++ RR+E E + R++   Q+EE + L
Sbjct: 975  GEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLL 1034

Query: 343  REQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPE 402
            RE+ ++ + + RER  R E E        ++L  ++   ++R    R          E E
Sbjct: 1035 REEREKRRLQERERQYREEEEL---QQEEEQLLGEERETRRRQELERQYRKEEELQQEEE 1091

Query: 403  AELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRK 462
              L  E +K  ++ +        +  Q+E+++  EE+++ +  ++ER  +  E    + +
Sbjct: 1092 QLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEE 1151

Query: 463  VEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVAT 522
               ++EP   EK ++   E ++  + +    +  L   E+    Q   +  ++  ++   
Sbjct: 1152 QLLREEP---EKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEELQRQ 1208

Query: 523  LKKIR------------RYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEK 570
             +K R            +++  K+   +  +VY +      G + E  +++  + +   +
Sbjct: 1209 KRKQRYRDEDQRSDLKWQWEPEKENAVRDNKVYCK------GRENEQFRQLEDSQLRDRQ 1262

Query: 571  AEEKLAGEELAGEEAPQEKAEDK-----------PSTDLSAPVNGEATSQKGESAEDK-- 617
            +++ L  + L GE+  +++ +++               L      EA  +  +S E+K  
Sbjct: 1263 SQQDL--QHLLGEQQERDREQERRRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQL 1320

Query: 618  ---EHEEGRDSEEGPR-CGSSEDLHDVREGPDLDRPGSDRQERE 657
               E EE R  +E  R     E L   RE   L R   DR+ RE
Sbjct: 1321 LREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFRE 1364



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 92/434 (21%), Positives = 183/434 (42%), Gaps = 57/434 (13%)

Query: 281  EKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELR 340
            E+ L + R RK + E       S  + D   R  E + R + R R+     ++ ++E  R
Sbjct: 1405 EQQLRQDRDRKFREEE---QQLSRQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHR 1461

Query: 341  RLRE-----QEKEEKERRRERADRG--EAERGSGGSSGD------ELR---------EDD 378
            + RE     QE+EE++  R+  DR   E E+       D      ELR         E++
Sbjct: 1462 KFREEEQLLQEREEQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPERKFLEEE 1521

Query: 379  EPVKKRGR-----------KGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKP 427
            + + ++ R           + + RG     D + +   E + ++  ++ Q S  E  RK 
Sbjct: 1522 QQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERDRKF 1581

Query: 428  GQKEKRVRPEEKQQAKPVKVERTRKRSEGFSM-----DRKVEKKKEPSVEEKLQKLHSEI 482
              +E++VR +E Q+ K ++ E+  +R EG        DRK  + ++   E + Q+LH + 
Sbjct: 1582 RLEEQKVRRQE-QERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQE 1640

Query: 483  KFALKVDSPDVKRCLNALEEL-----GTLQVTSQILQKNTDVVATLKKIRRYKANKDVME 537
            +    ++     R     ++L        +   Q+LQ+  +     +++RR + ++   E
Sbjct: 1641 RDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEE-----QQLRRQERDRKFRE 1695

Query: 538  KAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEE-APQEKAEDKPST 596
            +  ++  + + R     ++  Q++ +  +E++  EE+   +E   E+   QE+       
Sbjct: 1696 EEQQLRRQERERKF---LQEEQQLRRQELERKFREEEQLRQETEQEQLRRQERYRKILEE 1752

Query: 597  DLSAPVNGEATSQKGE-SAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQE 655
            +   P   E   ++ E   + +E E+ R   E  +  S E     RE   L +   ++Q 
Sbjct: 1753 EQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEEQLRQEREEQQL 1812

Query: 656  RERARGDSEALDEE 669
            R + R      +EE
Sbjct: 1813 RPQQRDGKYRWEEE 1826



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 74/359 (20%), Positives = 160/359 (44%), Gaps = 42/359 (11%)

Query: 317  KRRDEARRRELEARRRREQEEELRRLREQ---EKEEKERRRERADRGEAERGSGGSSGDE 373
            + R++ RR+E E  R+  ++++L++  EQ   E+ EK RR+ER  +   E          
Sbjct: 946  EEREKRRRQERE--RQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQL 1003

Query: 374  LREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKR 433
            LRE+ E  ++R    R          E E  L  E +K   + +        +  Q+E++
Sbjct: 1004 LREEREK-RRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQ 1062

Query: 434  VRPEEKQQAKPVKVERTRKRSEGFSMD------------RKVEKKKEPSVEEKLQKLHSE 481
            +  EE++  +  ++ER  ++ E    +            R+ E++++   EE+LQ+   +
Sbjct: 1063 LLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQ 1122

Query: 482  I--KFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKA 539
            +  +   K    +++R     EE+   Q   Q+L++  +     +  R+Y+  +++ ++ 
Sbjct: 1123 LLREEREKRRRQELERQYREEEEV--QQEEEQLLREEPEKRRRQELERQYREEEELQQEE 1180

Query: 540  AEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLS 599
             ++            +   Q+  +   E++  EE    EEL  ++  Q   ++   +DL 
Sbjct: 1181 EQL------------LREEQEKRRQERERQYREE----EELQRQKRKQRYRDEDQRSDLK 1224

Query: 600  APVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERER 658
                 E   ++    ++K + +GR++E+  +   S+ L D +   DL     ++QER+R
Sbjct: 1225 WQWEPE---KENAVRDNKVYCKGRENEQFRQLEDSQ-LRDRQSQQDLQHLLGEQQERDR 1279



 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 76/352 (21%), Positives = 142/352 (40%), Gaps = 49/352 (13%)

Query: 320 DEARRRELEARRR----REQEEELRRL--REQEKEEKERRRERADRGEAERGSGGSSGDE 373
           DE +R   + +      R QEE+ RR   R+++ EE+  +R R  R E ER    + G+E
Sbjct: 96  DEEKRARCDGKESLLQDRRQEEDQRRFEPRDRQLEEEPGQRRRQKRQEQEREL--AEGEE 153

Query: 374 LREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKR 433
             E  E +++R R+ R            E E  R  ++  +  +   TE      Q  +R
Sbjct: 154 QSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRR 213

Query: 434 VRPEEKQQAKPVKVERTRKRSEG-FSMDRKVEKKKEPSV----EEKLQKLHSEIKFALKV 488
              E +++ +  K ++ R+R +  F  + + E +K  +V    EEKLQ+           
Sbjct: 214 ELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQE----------- 262

Query: 489 DSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKS 548
           + P  +R L   EE                    L+K+ R +  ++  E+  +     + 
Sbjct: 263 EEPQRQRELQEEEE-------------------QLRKLERQELRRERQEEEQQQQRLRRE 303

Query: 549 RVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATS 608
           + L  K E  ++  +   E+ + +E+   +E   E+  + + E++    L      E   
Sbjct: 304 QQLRRKQEEERREQQE--ERREQQERREQQEERREQQLRREQEERREQQL----RREQEE 357

Query: 609 QKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERAR 660
           ++ E    +E EE R  ++  R         +R    L R    R+E++  R
Sbjct: 358 ERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRR 409



 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 56/317 (17%), Positives = 126/317 (39%), Gaps = 21/317 (6%)

Query: 186  EEENSESSSESEKTS----DQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSD 241
            EEE      E ++ S    D+ F  E++   R  +       +++          + + D
Sbjct: 1559 EEEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERD 1618

Query: 242  GAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSS 301
                E   + +            D     ++P   R+  E+ L   R RK + E      
Sbjct: 1619 RKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQE 1678

Query: 302  SSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRR------LREQEKEEKERRRE 355
              +      +R  +++  ++  RR+   R+  ++E++LRR       RE+E+  +E  +E
Sbjct: 1679 GEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQE 1738

Query: 356  RADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELE--------R 407
            +  R E  R            +++ ++++ R  + R          E +L         R
Sbjct: 1739 QLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFR 1798

Query: 408  EAKKSAKKPQSSSTEPARKPGQ---KEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVE 464
            E ++  ++ +     P ++ G+   +E++++ EE++Q    + +R  +  E F+   K  
Sbjct: 1799 EEEQLRQEREEQQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSR 1858

Query: 465  KKKEPSVEEKLQKLHSE 481
            ++++   +E+ QK   E
Sbjct: 1859 REEQELWQEEEQKRRQE 1875



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 75/401 (18%), Positives = 155/401 (38%), Gaps = 56/401 (13%)

Query: 278 KPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEE 337
           K  E+   + R ++ + ER       + +  +     E + R E R +  E  R  ++E 
Sbjct: 556 KRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEER 615

Query: 338 ELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSS 397
             +RL+ +E EE+ R++      + ER        +LR + +  +++  K          
Sbjct: 616 REQRLKREEPEEERRQQLLKSEEQEERRQ-----QQLRREQQERREQRLK---------- 660

Query: 398 DSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGF 457
             E E  LE+  K+  ++ +        +  Q  +R++    +    ++ E   ++S+ +
Sbjct: 661 REEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVY 720

Query: 458 SMDRKVE-KKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKN 516
           S  RK E +++    EEK ++  SE+++                EE    Q   +     
Sbjct: 721 SRPRKQEGQRRRQEQEEKRRRRESELQW--------------QEEERAHRQQQEE----- 761

Query: 517 TDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLA 576
                  ++ R +       EK+     RL +R   P +   ++      E+++ E++  
Sbjct: 762 -------EQRRDFTWQWQAEEKSERGRQRLSAR---PPLREQRERQLRAEERQQREQRFL 811

Query: 577 GEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSED 636
            EE   E+  +++ E +        +  E   Q+ E A+  + EE    E+  R  S E 
Sbjct: 812 PEEEEKEQRRRQRREREKELQF---LEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQ 868

Query: 637 LHDVREGPDLDRPGSDRQE--------RERARGDSEALDEE 669
             D +    L+     R+         +E+ R + + L EE
Sbjct: 869 RRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEE 909



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 69/352 (19%), Positives = 149/352 (42%), Gaps = 40/352 (11%)

Query: 288  RGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEK 347
            R RK + E        +      +R  +++  ++  RR+ + R+  E E++LRR   Q++
Sbjct: 1553 RDRKFREEEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQ 1612

Query: 348  EEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELER 407
              +ER R                  + RED++ +++R  +   R        E E +L R
Sbjct: 1613 LRQERDR------------------KFREDEQLLQEREEQQLHRQERDRKFLEEEPQLRR 1654

Query: 408  EAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRK-RSEGFSMDRKVEKK 466
            +     ++ Q    +  RK  ++E+ ++  E+QQ +  + ER RK R E   + R+  ++
Sbjct: 1655 Q-----EREQQLRHDRDRKFREEEQLLQEGEEQQLR--RQERDRKFREEEQQLRRQERER 1707

Query: 467  KEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQIL-------QKNTDV 519
            K    E++L++   E KF       +  R     E+L   +   +IL       ++    
Sbjct: 1708 KFLQEEQQLRRQELERKFR----EEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQ 1763

Query: 520  VATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEE 579
            +   ++ R+++  + + ++  E   +L+S+    K    +++ +   E++   ++  G+ 
Sbjct: 1764 LRRQERDRKFREEEQLRQEREE--QQLRSQESDRKFREEEQLRQEREEQQLRPQQRDGKY 1821

Query: 580  LAGEEAPQ-EKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPR 630
               EE  Q E+ E +   +       E      E +  +E E  ++ E+  R
Sbjct: 1822 RWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQKRR 1873



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 68/371 (18%), Positives = 147/371 (39%), Gaps = 54/371 (14%)

Query: 317  KRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELRE 376
            +  ++  R E E RRR+E E + R     E+EE ++  E+  R E E+        + RE
Sbjct: 1118 QEEEQLLREEREKRRRQELERQYR-----EEEEVQQEEEQLLREEPEKRRRQELERQYRE 1172

Query: 377  DDEPVKKRGRKGRGRGPPSSSDSE----PEAELEREAKKSAKKPQSSST------EPARK 426
            ++E  ++  +  R        + E     E EL+R+ +K   + +   +      EP ++
Sbjct: 1173 EEELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEKE 1232

Query: 427  PGQKEKRV--RPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKF 484
               ++ +V  +  E +Q + ++  + R R     +   + +++E   E++ ++     + 
Sbjct: 1233 NAVRDNKVYCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRH 1292

Query: 485  ALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYT 544
              + +  + +    A       Q   Q+L++  +     +K RR + ++   E+      
Sbjct: 1293 FPEEEQLEREEQKEAKRRDRKSQEEKQLLREERE-----EKRRRQETDRKFREEE----- 1342

Query: 545  RLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNG 604
                       + +Q+  +  + +++ + K   EEL  +E  ++  E++           
Sbjct: 1343 -----------QLLQEREEQPLRRQERDRKFREEELRHQEQGRKFLEEEQ---------- 1381

Query: 605  EATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERE------R 658
                Q+ E    KE ++ R  E   +     D     E   L R   DR+ RE      R
Sbjct: 1382 RLRRQERERKFLKEEQQLRCQEREQQLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRR 1441

Query: 659  ARGDSEALDEE 669
               + + L+EE
Sbjct: 1442 QERERKFLEEE 1452



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 46/219 (21%), Positives = 101/219 (46%), Gaps = 14/219 (6%)

Query: 265  DSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKR--RDEA 322
            + +  +++  R RK  ++     R    +  R       +++ +++ R   +++   +E 
Sbjct: 1695 EEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLRRQERYRKILEEEQ 1754

Query: 323  RRRELEARRRREQEEELRRLREQE--KEEKERRRERADRGEAERGSGGSSGDELREDDEP 380
             R E E ++ R QE + R+ RE+E  ++E+E ++ R+   E++R            +++ 
Sbjct: 1755 LRPEREEQQLRRQERD-RKFREEEQLRQEREEQQLRSQ--ESDRKFREEEQLRQEREEQQ 1811

Query: 381  VKKRGRKGRGRGPPSSSD-SEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEK 439
            ++ + R G+ R         E E  L +E  +  +  +  +T+   K  ++E+ +  EE+
Sbjct: 1812 LRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQ--EKSRREEQELWQEEE 1869

Query: 440  QQAKPVKVERTRK-RSEGFSMDRKVEKKKEPSVEEKLQK 477
            Q+ +    ER RK R E     +K E++     E K Q+
Sbjct: 1870 QKRRQ---ERERKLREEHIRRQQKEEQRHRQVGEIKSQE 1905



 Score = 33.5 bits (75), Expect = 0.65
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 317  KRRDEARRRELEARRRREQEEELR--RLREQEKEEKERRRERADRGEAERGSG 367
            +R ++   +E E +RR+E+E +LR   +R Q+KEE+  R+    + +  +G G
Sbjct: 1858 RREEQELWQEEEQKRRQERERKLREEHIRRQQKEEQRHRQVGEIKSQEGKGHG 1910



 Score = 30.4 bits (67), Expect = 5.5
 Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 263  SSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEA 322
            S +SD   ++  + R+  E+   +P+ R  K            + +++    + +R  + 
Sbjct: 1790 SQESDRKFREEEQLRQEREEQQLRPQQRDGKYRW---------EEEQLQLEEQEQRLRQE 1840

Query: 323  RRRELEARRRREQEEELRRLREQ--EKEEKERRRERADRGEAERGSGGSSGDELREDDEP 380
            R R+  A  +   +E+ RR  ++  ++EE++RR+ER  +   E        ++       
Sbjct: 1841 RDRQYRAEEQFATQEKSRREEQELWQEEEQKRRQERERKLREEHIRRQQKEEQRHRQVGE 1900

Query: 381  VKKRGRKGRGR 391
            +K +  KG GR
Sbjct: 1901 IKSQEGKGHGR 1911


>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
          Length = 2454

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 95/361 (26%), Positives = 152/361 (42%), Gaps = 25/361 (6%)

Query: 142  SDSDSDK-SSDNSGLKRKTPALKMSVSKRARKASSDLDQASV-SPSEEENSESSSESEKT 199
            S SD++K S    G       LK    +  R  SS  +   + S S   ++E SSE  K 
Sbjct: 1070 SSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSDAEESSEDNKK 1129

Query: 200  SDQDFTPEKKAA-VRAPRRGPLGGRKKKKAP---SASDSDSKAD---------SDGAKPE 246
              Q  + +KKA  V+  +R  L    K+K     S+S SD + D         SD  K +
Sbjct: 1130 KKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIK 1189

Query: 247  PVAMARSASSSSS-SSSSSDSDVSVKKPPRGRKPAEKPLPKPR-GRKPKPERPPSSSSSD 304
            PV      SS +    SS D  +S   P       +   P+ R  +K   E   ++ SSD
Sbjct: 1190 PVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSD 1249

Query: 305  SDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAER 364
             D    D   E K+R   +  E       + +       + E+ +K R R R  R +   
Sbjct: 1250 EDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTV 1309

Query: 365  GSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEP----EAELEREAKKSAKKPQSSS 420
             S G SG+E +   +P + +  KGR R   SS DSE     E+ +  E  +S  + Q   
Sbjct: 1310 -SDGESGEEKKT--KPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDE-QRPR 1365

Query: 421  TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480
            T  A+K   +E +   ++K++ + +KV+         + + + E+K+E   EE+ ++   
Sbjct: 1366 TRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEE 1425

Query: 481  E 481
            E
Sbjct: 1426 E 1426



 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 133/668 (19%), Positives = 232/668 (34%), Gaps = 118/668 (17%)

Query: 84   IQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVT-----AVTATAASD 138
            + N  H +       SS D+E  +      S     D+D  +M +         A+A++D
Sbjct: 822  MDNQGHKNLKTSQEGSSDDAERKQERETFSSAEGTVDKDTTIMELRDRLPKKQQASASTD 881

Query: 139  RMESDSDSDKSSDN------SGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSES 192
             ++  S  ++S  +      +  K K+  LK    K+ +   SD+ +  +   +++ S+ 
Sbjct: 882  GVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTCKKVQDGLSDIAEKFL---KKDQSDE 938

Query: 193  SSESEKTSDQDFTPEKK---------------------AAVRAPRRG-----PLGGRKKK 226
            +SE +K   +  T EKK                        + P R      P G ++ K
Sbjct: 939  TSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKGIKQIK 998

Query: 227  KAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK 286
               +  +  SK   D    +   ++  A  S+    S DS    KK   G    EK   K
Sbjct: 999  NGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSED-KKSKNGAYGREKKRCK 1057

Query: 287  PRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQE 346
              G+  +  +  SSS ++  S + D  +   +R                   L+R+    
Sbjct: 1058 LLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKR-------------------LKRI---- 1094

Query: 347  KEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELE 406
             E +ERR   + R   E  SG SS D   E  E  KK+ ++   +        +    L 
Sbjct: 1095 -ELRERRNLSSKRNTKEIQSGSSSSD-AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLR 1152

Query: 407  REAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGF---SMDRKV 463
               K+      SSS+       Q        ++Q+ KPV          GF   S D  +
Sbjct: 1153 TSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEAL 1212

Query: 464  EKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEE--------------------- 502
             K    +V++       E + A K+   ++K  L++ E+                     
Sbjct: 1213 SKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEEN 1272

Query: 503  LGTLQVTSQILQKNTDVVATLKKIR------RYKANKDVMEKAAEVYTRLKSRVLGPKIE 556
             G  +  +Q+  ++       KK R      R+K      E   E  T+ K        +
Sbjct: 1273 PGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEH------K 1326

Query: 557  AVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATS-------- 608
             V+  N+  +  E +E+    E    EE  + + E +P T  +     E           
Sbjct: 1327 EVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKK 1386

Query: 609  ------QKGESAEDKEH--EEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERAR 660
                  Q+  S+E+K +  EE  + EE       E+  +  E  D   PG  R++  +  
Sbjct: 1387 RRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKIL 1446

Query: 661  GDSEALDE 668
             D +   E
Sbjct: 1447 KDDKLRTE 1454



 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 118/509 (23%), Positives = 197/509 (38%), Gaps = 91/509 (17%)

Query: 131  VTATAASDRMESDSDS--DKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEE 188
            +T++++SD  + D +S  + SSD   +K  T  L +S      ++S D          E 
Sbjct: 1162 ITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGD----------EA 1211

Query: 189  NSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSD------- 241
             S+S   +    D D  PE + A +          ++ KA  +SD D  +D +       
Sbjct: 1212 LSKSVPVTVDDDDDDNDPENRIAKKMLL-------EEIKANLSSDEDGSSDDEPEEGKKR 1264

Query: 242  -GAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGR-------------------KPAE 281
             G + E       A +  +S S SDS+ S K   R R                   KP E
Sbjct: 1265 TGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKE 1324

Query: 282  KPLPKPRGRKPKPERPPSSSSSDSDSDEV---DRISEWK-----RRDEARRRELEARRRR 333
                K R R+    +  S  S DSD  E    + +SE +     R   A++ ELE  +R 
Sbjct: 1325 HKEVKGRNRR----KVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRS 1380

Query: 334  -EQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRG 392
             +Q+++ RR++ QE    E +    +  E E        +E  E++E  +    K  G+G
Sbjct: 1381 YKQKKKRRRIKVQEDSSSENKSNSEE--EEEEKEEEEEEEEEEEEEEEDENDDSKSPGKG 1438

Query: 393  PPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRK 452
                     + +L  E + + K+ +      A +  ++EK     E + A P K   T K
Sbjct: 1439 RKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTK 1498

Query: 453  RSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKR-----CLNALEEL---- 503
                  +D   E+ KEP V+     +H  +   LK    D  +     C  ++++     
Sbjct: 1499 ----LVLDED-EETKEPLVQ-----VHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSP 1548

Query: 504  --GTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKV 561
              G +      L K   VV+ L  +        ++    +  T L    L   +  + + 
Sbjct: 1549 GSGCILAHCMGLGKTLQVVSFLHTV--------LLCDKLDFSTALVVCPLNTALNWMNEF 1600

Query: 562  NKAGMEKEKAEEKLAGEELAGEEAPQEKA 590
             K   E  K +EKL   ELA  + PQE++
Sbjct: 1601 EK-WQEGLKDDEKLEVSELATVKRPQERS 1628



 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 125/582 (21%), Positives = 208/582 (35%), Gaps = 102/582 (17%)

Query: 138  DRMESDSDSDKSSDNSGL--KRKTPALKMSVSKRARKASSDLDQASVSPSEEE------- 188
            D+ +  S+ DK     G   K+K    K  V K  ++  S  D     P  EE       
Sbjct: 934  DQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKG 993

Query: 189  -----NSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGA 243
                 N  +  E +    +D T +KK  +        G  K     S+ D  SK  + G 
Sbjct: 994  IKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTG--KGDSCDSSEDKKSKNGAYGR 1051

Query: 244  KPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPK--------PE 295
            + +   +   +S      SSSD++    K   G   ++K L +   R+ +         E
Sbjct: 1052 EKKRCKLLGKSSRKRQDCSSSDTEKYSMKED-GCNSSDKRLKRIELRERRNLSSKRNTKE 1110

Query: 296  RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRE 355
                SSSSD++    D   + K+R  ++++ +  + ++         R+Q         +
Sbjct: 1111 IQSGSSSSDAEESSEDNKKK-KQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSD 1169

Query: 356  RADRGEAERGSGGSSGDELREDDEPV---------KKRGRKGRGRGPP-----SSSDSEP 401
              D  +   G G S   +++   E +         +  G +   +  P        D++P
Sbjct: 1170 IEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDP 1229

Query: 402  EAEL-------EREAKKSAKKPQSSSTEPAR-----------KPGQKEKR--VRPEEKQQ 441
            E  +       E +A  S+ +  SS  EP              PG +E +  V  E    
Sbjct: 1230 ENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSD 1289

Query: 442  AKPVKVERTRKR--------SEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFA--LKVDSP 491
            ++  K  R R R        S+G S + K  K KE          H E+K     KV S 
Sbjct: 1290 SEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKE----------HKEVKGRNRRKVSSE 1339

Query: 492  DVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVL 551
            D +   +  +E G  +  S+   +        ++ R   A K  +E+    Y + K R  
Sbjct: 1340 DSED--SDFQESGVSEEVSESEDE--------QRPRTRSAKKAELEENQRSYKQKKKRRR 1389

Query: 552  GPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQK- 610
                E     NK+  E+E+ E+    EE   EE  +E+ E+  + D  +P  G    +K 
Sbjct: 1390 IKVQEDSSSENKSNSEEEEEEK----EEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKI 1445

Query: 611  -------GESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPD 645
                    E+    + EE R      R    E L +V E  D
Sbjct: 1446 LKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIED 1487



 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 80/412 (19%), Positives = 154/412 (37%), Gaps = 33/412 (8%)

Query: 96   PPVSSSDSEAP-EANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSG 154
            P V ++    P E NP   +  +E +E        +V       R  SDS  D    N  
Sbjct: 619  PRVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPN-- 676

Query: 155  LKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRA 214
               K P  K S +      +SD D+      E      SS S+   ++  T  K      
Sbjct: 677  ---KLPKSKQSETV---DQNSDSDEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLK 730

Query: 215  PRRGPLGGRKKKKAPSASDSD-SKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKP 273
             + G     K+K+  S S SD        AK   ++  +  + S SS+  S+ +  +K  
Sbjct: 731  TQAGKDDKGKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSM 790

Query: 274  PR--GRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRE----- 326
             +    +  +K +P  +      +   S    D+   +  + S+    D+A R++     
Sbjct: 791  SKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETF 850

Query: 327  LEARRRREQEEELRRLREQ--EKEEKERRRERADRGEAERGSGGS----SGDELREDDEP 380
              A    +++  +  LR++  +K++     +  D+   +  S  S       E +E  + 
Sbjct: 851  SSAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKH 910

Query: 381  VKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQ-KEKRVRPEEK 439
            +K +  K    G    ++   + +   E  +  KK     TE  +KP   K+K ++ E++
Sbjct: 911  LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 970

Query: 440  QQAKPVKVERTRKRSEGFSMDRKVE---------KKKEPSVEEKLQKLHSEI 482
             ++     E+  +R E     + ++         +KK   + +K  K   E+
Sbjct: 971  YESSSDGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDEL 1022



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 59/240 (24%), Positives = 86/240 (35%), Gaps = 19/240 (7%)

Query: 100  SSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDK----------S 149
            SSD E  E     G   +E+  D    A   V + + SD  ES     +          S
Sbjct: 1253 SSDDEPEEGKKRTGKQNEENPGDEE--AKNQVNSESDSDSEESKKPRYRHRLLRHKLTVS 1310

Query: 150  SDNSGLKRKT-PALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEK 208
               SG ++KT P     V  R R+  S  D       E   SE  SESE          K
Sbjct: 1311 DGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAK 1370

Query: 209  KAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDV 268
            KA +   +R     +K+++     DS S+  S+  + E                  D + 
Sbjct: 1371 KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDEND 1430

Query: 269  SVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELE 328
              K P +GRK   K L      K    R  + ++   + +   RI+E +R  E  R  +E
Sbjct: 1431 DSKSPGKGRKKIRKIL------KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIE 1484


>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
          Length = 2492

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 95/361 (26%), Positives = 152/361 (42%), Gaps = 25/361 (6%)

Query: 142  SDSDSDK-SSDNSGLKRKTPALKMSVSKRARKASSDLDQASV-SPSEEENSESSSESEKT 199
            S SD++K S    G       LK    +  R  SS  +   + S S   ++E SSE  K 
Sbjct: 1108 SSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSDAEESSEDNKK 1167

Query: 200  SDQDFTPEKKAA-VRAPRRGPLGGRKKKKAP---SASDSDSKAD---------SDGAKPE 246
              Q  + +KKA  V+  +R  L    K+K     S+S SD + D         SD  K +
Sbjct: 1168 KKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIK 1227

Query: 247  PVAMARSASSSSS-SSSSSDSDVSVKKPPRGRKPAEKPLPKPR-GRKPKPERPPSSSSSD 304
            PV      SS +    SS D  +S   P       +   P+ R  +K   E   ++ SSD
Sbjct: 1228 PVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSD 1287

Query: 305  SDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAER 364
             D    D   E K+R   +  E       + +       + E+ +K R R R  R +   
Sbjct: 1288 EDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTV 1347

Query: 365  GSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEP----EAELEREAKKSAKKPQSSS 420
             S G SG+E +   +P + +  KGR R   SS DSE     E+ +  E  +S  + Q   
Sbjct: 1348 -SDGESGEEKKT--KPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDE-QRPR 1403

Query: 421  TEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHS 480
            T  A+K   +E +   ++K++ + +KV+         + + + E+K+E   EE+ ++   
Sbjct: 1404 TRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEE 1463

Query: 481  E 481
            E
Sbjct: 1464 E 1464



 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 133/668 (19%), Positives = 232/668 (34%), Gaps = 118/668 (17%)

Query: 84   IQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVT-----AVTATAASD 138
            + N  H +       SS D+E  +      S     D+D  +M +         A+A++D
Sbjct: 860  MDNQGHKNLKTSQEGSSDDAERKQERETFSSAEGTVDKDTTIMELRDRLPKKQQASASTD 919

Query: 139  RMESDSDSDKSSDN------SGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSES 192
             ++  S  ++S  +      +  K K+  LK    K+ +   SD+ +  +   +++ S+ 
Sbjct: 920  GVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTCKKVQDGLSDIAEKFL---KKDQSDE 976

Query: 193  SSESEKTSDQDFTPEKK---------------------AAVRAPRRG-----PLGGRKKK 226
            +SE +K   +  T EKK                        + P R      P G ++ K
Sbjct: 977  TSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKGIKQIK 1036

Query: 227  KAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK 286
               +  +  SK   D    +   ++  A  S+    S DS    KK   G    EK   K
Sbjct: 1037 NGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSED-KKSKNGAYGREKKRCK 1095

Query: 287  PRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQE 346
              G+  +  +  SSS ++  S + D  +   +R                   L+R+    
Sbjct: 1096 LLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKR-------------------LKRI---- 1132

Query: 347  KEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELE 406
             E +ERR   + R   E  SG SS D   E  E  KK+ ++   +        +    L 
Sbjct: 1133 -ELRERRNLSSKRNTKEIQSGSSSSD-AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLR 1190

Query: 407  REAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGF---SMDRKV 463
               K+      SSS+       Q        ++Q+ KPV          GF   S D  +
Sbjct: 1191 TSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEAL 1250

Query: 464  EKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEE--------------------- 502
             K    +V++       E + A K+   ++K  L++ E+                     
Sbjct: 1251 SKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEEN 1310

Query: 503  LGTLQVTSQILQKNTDVVATLKKIR------RYKANKDVMEKAAEVYTRLKSRVLGPKIE 556
             G  +  +Q+  ++       KK R      R+K      E   E  T+ K        +
Sbjct: 1311 PGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEH------K 1364

Query: 557  AVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATS-------- 608
             V+  N+  +  E +E+    E    EE  + + E +P T  +     E           
Sbjct: 1365 EVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKK 1424

Query: 609  ------QKGESAEDKEH--EEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERAR 660
                  Q+  S+E+K +  EE  + EE       E+  +  E  D   PG  R++  +  
Sbjct: 1425 RRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKIL 1484

Query: 661  GDSEALDE 668
             D +   E
Sbjct: 1485 KDDKLRTE 1492



 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 118/509 (23%), Positives = 197/509 (38%), Gaps = 91/509 (17%)

Query: 131  VTATAASDRMESDSDS--DKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEE 188
            +T++++SD  + D +S  + SSD   +K  T  L +S      ++S D          E 
Sbjct: 1200 ITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGD----------EA 1249

Query: 189  NSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSD------- 241
             S+S   +    D D  PE + A +          ++ KA  +SD D  +D +       
Sbjct: 1250 LSKSVPVTVDDDDDDNDPENRIAKKMLL-------EEIKANLSSDEDGSSDDEPEEGKKR 1302

Query: 242  -GAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGR-------------------KPAE 281
             G + E       A +  +S S SDS+ S K   R R                   KP E
Sbjct: 1303 TGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKE 1362

Query: 282  KPLPKPRGRKPKPERPPSSSSSDSDSDEV---DRISEWK-----RRDEARRRELEARRRR 333
                K R R+    +  S  S DSD  E    + +SE +     R   A++ ELE  +R 
Sbjct: 1363 HKEVKGRNRR----KVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRS 1418

Query: 334  -EQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRG 392
             +Q+++ RR++ QE    E +    +  E E        +E  E++E  +    K  G+G
Sbjct: 1419 YKQKKKRRRIKVQEDSSSENKSNSEE--EEEEKEEEEEEEEEEEEEEEDENDDSKSPGKG 1476

Query: 393  PPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRK 452
                     + +L  E + + K+ +      A +  ++EK     E + A P K   T K
Sbjct: 1477 RKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTK 1536

Query: 453  RSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKR-----CLNALEEL---- 503
                  +D   E+ KEP V+     +H  +   LK    D  +     C  ++++     
Sbjct: 1537 ----LVLDED-EETKEPLVQ-----VHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSP 1586

Query: 504  --GTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEAVQKV 561
              G +      L K   VV+ L  +        ++    +  T L    L   +  + + 
Sbjct: 1587 GSGCILAHCMGLGKTLQVVSFLHTV--------LLCDKLDFSTALVVCPLNTALNWMNEF 1638

Query: 562  NKAGMEKEKAEEKLAGEELAGEEAPQEKA 590
             K   E  K +EKL   ELA  + PQE++
Sbjct: 1639 EK-WQEGLKDDEKLEVSELATVKRPQERS 1666



 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 125/582 (21%), Positives = 208/582 (35%), Gaps = 102/582 (17%)

Query: 138  DRMESDSDSDKSSDNSGL--KRKTPALKMSVSKRARKASSDLDQASVSPSEEE------- 188
            D+ +  S+ DK     G   K+K    K  V K  ++  S  D     P  EE       
Sbjct: 972  DQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKG 1031

Query: 189  -----NSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGA 243
                 N  +  E +    +D T +KK  +        G  K     S+ D  SK  + G 
Sbjct: 1032 IKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTG--KGDSCDSSEDKKSKNGAYGR 1089

Query: 244  KPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPK--------PE 295
            + +   +   +S      SSSD++    K   G   ++K L +   R+ +         E
Sbjct: 1090 EKKRCKLLGKSSRKRQDCSSSDTEKYSMKED-GCNSSDKRLKRIELRERRNLSSKRNTKE 1148

Query: 296  RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRE 355
                SSSSD++    D   + K+R  ++++ +  + ++         R+Q         +
Sbjct: 1149 IQSGSSSSDAEESSEDNKKK-KQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSD 1207

Query: 356  RADRGEAERGSGGSSGDELREDDEPV---------KKRGRKGRGRGPP-----SSSDSEP 401
              D  +   G G S   +++   E +         +  G +   +  P        D++P
Sbjct: 1208 IEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDP 1267

Query: 402  EAEL-------EREAKKSAKKPQSSSTEPAR-----------KPGQKEKR--VRPEEKQQ 441
            E  +       E +A  S+ +  SS  EP              PG +E +  V  E    
Sbjct: 1268 ENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSD 1327

Query: 442  AKPVKVERTRKR--------SEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFA--LKVDSP 491
            ++  K  R R R        S+G S + K  K KE          H E+K     KV S 
Sbjct: 1328 SEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKE----------HKEVKGRNRRKVSSE 1377

Query: 492  DVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVL 551
            D +   +  +E G  +  S+   +        ++ R   A K  +E+    Y + K R  
Sbjct: 1378 DSED--SDFQESGVSEEVSESEDE--------QRPRTRSAKKAELEENQRSYKQKKKRRR 1427

Query: 552  GPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQK- 610
                E     NK+  E+E+ E+    EE   EE  +E+ E+  + D  +P  G    +K 
Sbjct: 1428 IKVQEDSSSENKSNSEEEEEEK----EEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKI 1483

Query: 611  -------GESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPD 645
                    E+    + EE R      R    E L +V E  D
Sbjct: 1484 LKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIED 1525



 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 80/412 (19%), Positives = 154/412 (37%), Gaps = 33/412 (8%)

Query: 96   PPVSSSDSEAP-EANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSG 154
            P V ++    P E NP   +  +E +E        +V       R  SDS  D    N  
Sbjct: 657  PRVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPN-- 714

Query: 155  LKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRA 214
               K P  K S +      +SD D+      E      SS S+   ++  T  K      
Sbjct: 715  ---KLPKSKQSETV---DQNSDSDEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLK 768

Query: 215  PRRGPLGGRKKKKAPSASDSD-SKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKP 273
             + G     K+K+  S S SD        AK   ++  +  + S SS+  S+ +  +K  
Sbjct: 769  TQAGKDDKGKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSM 828

Query: 274  PR--GRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRE----- 326
             +    +  +K +P  +      +   S    D+   +  + S+    D+A R++     
Sbjct: 829  SKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETF 888

Query: 327  LEARRRREQEEELRRLREQ--EKEEKERRRERADRGEAERGSGGS----SGDELREDDEP 380
              A    +++  +  LR++  +K++     +  D+   +  S  S       E +E  + 
Sbjct: 889  SSAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKH 948

Query: 381  VKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQ-KEKRVRPEEK 439
            +K +  K    G    ++   + +   E  +  KK     TE  +KP   K+K ++ E++
Sbjct: 949  LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008

Query: 440  QQAKPVKVERTRKRSEGFSMDRKVE---------KKKEPSVEEKLQKLHSEI 482
             ++     E+  +R E     + ++         +KK   + +K  K   E+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDEL 1060



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 59/240 (24%), Positives = 86/240 (35%), Gaps = 19/240 (7%)

Query: 100  SSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDK----------S 149
            SSD E  E     G   +E+  D    A   V + + SD  ES     +          S
Sbjct: 1291 SSDDEPEEGKKRTGKQNEENPGDEE--AKNQVNSESDSDSEESKKPRYRHRLLRHKLTVS 1348

Query: 150  SDNSGLKRKT-PALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEK 208
               SG ++KT P     V  R R+  S  D       E   SE  SESE          K
Sbjct: 1349 DGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAK 1408

Query: 209  KAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDV 268
            KA +   +R     +K+++     DS S+  S+  + E                  D + 
Sbjct: 1409 KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDEND 1468

Query: 269  SVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELE 328
              K P +GRK   K L      K    R  + ++   + +   RI+E +R  E  R  +E
Sbjct: 1469 DSKSPGKGRKKIRKIL------KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIE 1522


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 76.6 bits (187), Expect = 7e-14
 Identities = 103/479 (21%), Positives = 185/479 (38%), Gaps = 65/479 (13%)

Query: 172 KASSDLDQASVSPSEEENSESSSESEKTSDQD---------FTPEKKAAVRAPRRGPLGG 222
           KA       +  P    N +  +  E+T  +D            E  + + AP +     
Sbjct: 173 KAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSH 232

Query: 223 RKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEK 282
            +KKK     D   +       P P+      ++        D    + +     +   K
Sbjct: 233 PRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDL---ISREISKFRDTHK 289

Query: 283 PLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRL 342
            L + +G+K K            +  E+++  E + R+  R RE E RR RE+E E  R 
Sbjct: 290 KLEEEKGKKEK------------ERQEIEK--ERRERERERERERE-RRERERERERERE 334

Query: 343 REQEKE-EKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEP 401
           RE+EKE E+ER R+R DR   +        +  R+ D        K R R    S D E 
Sbjct: 335 REKEKERERERERDR-DRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRER 393

Query: 402 EAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDR 461
           E E ERE ++          E  R+  ++ +R R  E+++ K  K +R     + +   R
Sbjct: 394 ERERERERER--------EREREREREREREREREREREREKDKKRDREEDEEDAYER-R 444

Query: 462 KVEKK---KEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTD 518
           K+E+K   KE + +E+L+      +   +    + +R     EE           ++  +
Sbjct: 445 KLERKLREKEAAYQERLKNWEIRERKKTREYEKEAER-----EE-----------ERRRE 488

Query: 519 VVATLKKIRRYKANKDVMEKAAEVY--TRLKSRVLGPKIEAVQKVNKAGMEKEKAEE--- 573
           +    K+++ +  + D      + Y  + L+ R+   + E          EKE+ EE   
Sbjct: 489 MAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQ 548

Query: 574 KLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGE---SAEDKEHEEGRDSEEGP 629
           +L  E     +A  ++ E +        +  E  S++ E     ++++ EE  + EE P
Sbjct: 549 RLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEP 607



 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 85/447 (19%), Positives = 153/447 (34%), Gaps = 67/447 (14%)

Query: 82  WEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRME 141
           W+ +       + P  V++ D EA           DE+ + R  M   A+         E
Sbjct: 172 WKAKKKASNGNARPETVTNDDEEA----------LDEETKRRDQMIKGAIEVLIREYSSE 221

Query: 142 SDSDSDKSSDNSGLKRKTP-------------------------ALKMSVSKRA------ 170
            ++ S +S  +   K+K                           A++M   KR       
Sbjct: 222 LNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREI 281

Query: 171 ---RKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKK 227
              R     L++      +E         E+  +++   E++   R   R      ++K+
Sbjct: 282 SKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERER---EREKE 338

Query: 228 APSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKP 287
                + +   D D  K       R          SSD +    +     +  E+   + 
Sbjct: 339 KERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERE 398

Query: 288 RGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELR------- 340
           R R+ + ER            E +R  E  ++ +    E +A  RR+ E +LR       
Sbjct: 399 REREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQ 458

Query: 341 -RLREQEKEEKERRRE---RADRGEAERGSGGSSGDELRE--------DDEPVKKRGRKG 388
            RL+  E  E+++ RE    A+R E  R         L+E         D+P   RG   
Sbjct: 459 ERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSAL 518

Query: 389 RGRGPPSSSDSE-PEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKV 447
           + R      + E  E + +RE ++  +  Q    E    P  + +R+  E +++ +P   
Sbjct: 519 QKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIK 578

Query: 448 ERTRKRSEGFSMDRKVEKKKEPSVEEK 474
           +      E      K EK++EP  EE+
Sbjct: 579 QEPESEEEEEEKQEKEEKREEPMEEEE 605



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 71/347 (20%), Positives = 126/347 (36%), Gaps = 63/347 (18%)

Query: 140 MESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKT 199
           ME D     S + S  +     L+    K+ ++      +      E E      E E+ 
Sbjct: 269 MEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERE 328

Query: 200 SDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSS 259
            +++   EK+      R       + K+     D +   D D  +       RS S   S
Sbjct: 329 REREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKS 388

Query: 260 SSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVD-------- 311
                + +   ++     +  E+   + R R+ + ER       D + DE D        
Sbjct: 389 RDRERERERERERERERERERERERERERERERERERE-KDKKRDREEDEEDAYERRKLE 447

Query: 312 ------------RISEWK--------------RRDEARRREL--EARRRREQEEEL---- 339
                       R+  W+               R+E RRRE+  EA+R +E  E+     
Sbjct: 448 RKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDR 507

Query: 340 ------------RRLREQEKE----EKERRRERADRGEAER---GSGGSSGDELREDDEP 380
                       +RLR++EKE    E++R+RE+ +  E  +     G    D   +  E 
Sbjct: 508 DDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQ 567

Query: 381 VKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKP 427
             +R R+ + +  P   +SE E E ++E ++  ++P     EP +KP
Sbjct: 568 EAERRRQPQIKQEP---ESEEEEEEKQEKEEKREEPMEEEEEPEQKP 611



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 18/250 (7%)

Query: 428 GQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALK 487
           G+K+  V+ + K +A+  + +  +K S G +    V    E +++E+ ++    IK A++
Sbjct: 153 GEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIE 212

Query: 488 VDSPDVKRCLNALEELGTLQVTSQILQKNTDV-----VATL---KKIRRYKANKDVMEKA 539
           V   +    LNA  +        +  +K  D+     VA L     I +   N   ME+ 
Sbjct: 213 VLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEED 272

Query: 540 AEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLS 599
                  K  ++  +I   +  +K  +E+EK +++   +E+  E   +E+  ++      
Sbjct: 273 -------KRDLISREISKFRDTHKK-LEEEKGKKEKERQEIEKERRERERERERERERRE 324

Query: 600 APVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERERA 659
                E   ++ E  +++E E  RD +         D  D     D DR  S  + ++R+
Sbjct: 325 RERERERERER-EKEKERERERERDRDRDRTKERDRD-RDRERDRDRDRERSSDRNKDRS 382

Query: 660 RGDSEALDEE 669
           R   ++ D E
Sbjct: 383 RSREKSRDRE 392


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 84/382 (21%), Positives = 147/382 (38%), Gaps = 41/382 (10%)

Query: 88  PHASYSAPP--PVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSD 145
           P  S+++ P  P   S SE  E +  D  DA+ D+   G       T         + SD
Sbjct: 283 PPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQL------NFSD 336

Query: 146 SDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFT 205
            D+   NS                  K ++  DQ S +    EN + + E   T      
Sbjct: 337 DDEQGSNSP-----------------KENNSEDQGSKASENNENKKETDEVSNTKSSSQI 379

Query: 206 PEKKAAVRAPR-RGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSS 264
           P + +  + P  +GP   +++  +                P+  A+        S    +
Sbjct: 380 PAQPSVAKVPYGKGPSFNQERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVA 439

Query: 265 DSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEW-----KRR 319
           D D   K+  R +      + + R R+ + ER        + ++++ R+ E      K+ 
Sbjct: 440 DEDEIWKQRRRQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQP 499

Query: 320 DEARRRELEARRRREQEEELRRLREQEKE-EKERRRERADRGEAERGSGGSSGDEL---- 374
                RE E  + RE+E+EL + +EQE+E E+E+ RER    E E         E+    
Sbjct: 500 SPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKER 559

Query: 375 -REDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKR 433
            +E ++ ++++  K +        + E E E ERE  +   +P+  + EP  +  + E  
Sbjct: 560 KQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQESENS 619

Query: 434 VRPEEKQQAKPVKVERTRKRSE 455
              EE    +PV   +   RSE
Sbjct: 620 CNKEE----EPVFTRQDSNRSE 637



 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 31/277 (11%)

Query: 222 GRKKKKAPSASDSDSKADSDGA-KPEPVAMARSASSSSSSSSSSDSDVSVKKPP-----R 275
           G    K  ++ D  SKA  +   K E   ++ + SSS   +  S + V   K P     R
Sbjct: 341 GSNSPKENNSEDQGSKASENNENKKETDEVSNTKSSSQIPAQPSVAKVPYGKGPSFNQER 400

Query: 276 GRKPAEKPLPK-------PRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELE 328
           G      P PK       P  R+  P RP    S    +DE D I + +RR ++      
Sbjct: 401 GTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADE-DEIWKQRRRQQSEISAAV 459

Query: 329 ARRRREQEEELRRLREQEKEEKERRRERADR--GEAERGSGGSSGDELREDDEPVKKRGR 386
            R R+ +EEE RR+ EQ K     + +R D   G  E+     S +E+RE +   K+R R
Sbjct: 460 ERARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQP---SPEEIRERERE-KERER 515

Query: 387 KGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVK 446
                      + E E E E+E +K  +K +    E  ++  +++++ R  EK++ +  +
Sbjct: 516 -----------EKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKE 564

Query: 447 VERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIK 483
            E  R++ +   + +  E++KE  +E++ +KL  +I+
Sbjct: 565 KELERQKEKEKELQKMKEQEKECELEKEREKLEEKIE 601



 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 131/630 (20%), Positives = 232/630 (36%), Gaps = 83/630 (13%)

Query: 55  PKDLFPYDKCKDKYGKPNKRKGFNEGL-WEIQNNPHASYSAP--PPVSSSDSEA--PEAN 109
           P    P  K ++K   PN      +G  W  +   H     P  PP       A  PE  
Sbjct: 56  PPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKTPEVPPAQPKPGVAAPPEVA 115

Query: 110 PADGSDADEDDEDRG---------VMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTP 160
           PA  S A      +G              ++ A    ++ E +++ D       L+    
Sbjct: 116 PAPKSWASNKQGGQGDGIQVNSQFQQEFPSLQAAGDQEKKEKETNDDNYGPGPSLRPPNV 175

Query: 161 ALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPL 220
           A      K A   SS  DQ    P ++E++  +SE    +D     EK+ A   P +  L
Sbjct: 176 ACWRDGGKAAGSPSSS-DQDEKLPGQDESTAGTSEQ---NDILKVVEKRIAC-GPPQAKL 230

Query: 221 GGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPA 280
            G++   A  AS   +       +  P  M             S S+ +  K  RGR P 
Sbjct: 231 NGQQ---AALASQYRAMMPPYMFQQYP-RMTYPPLHGPMRFPPSLSETN--KGLRGRGP- 283

Query: 281 EKPLPKPRGRKPKPERPPSSSSSD-SDSDEVDRISEWKRRDEARRRELEARRRREQEEEL 339
                 P     +PERP   S+S+  + D+ D +       EA      A+   +  E+L
Sbjct: 284 ------PPSWASEPERPSILSASELKELDKFDNLDA-----EADEGWAGAQMEVDYTEQL 332

Query: 340 RRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGR---------- 389
               + E+     +   ++    ++GS  S  +E +++ + V       +          
Sbjct: 333 NFSDDDEQGSNSPKENNSE----DQGSKASENNENKKETDEVSNTKSSSQIPAQPSVAKV 388

Query: 390 --GRGPPSSSDSEPEAELEREAKKSAKK--PQSSSTEPARK-PGQKEKRVRPEE------ 438
             G+GP  + +    + L    K  A++  P      P R  P   +++V  E+      
Sbjct: 389 PYGKGPSFNQERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIWKQR 448

Query: 439 -KQQAK-PVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRC 496
            +QQ++    VER RKR E    +R++E++++ +  EKL++L  ++    K  SP+  R 
Sbjct: 449 RRQQSEISAAVERARKRRE--EEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEEIRE 506

Query: 497 LNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDV---------------MEKAAE 541
               +E    +   +  ++  +      + R+ +  K++                EK  E
Sbjct: 507 REREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKE 566

Query: 542 VYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAP 601
           +  + +      K++  +K  +   E+EK EEK+   E   E   +++  +        P
Sbjct: 567 LERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQESENSCNKEEEP 626

Query: 602 VNGEATSQKGE-SAEDKEHEEGRDSEEGPR 630
           V     S + E  A    HE   +S   PR
Sbjct: 627 VFTRQDSNRSEKEATPVVHETEPESGSQPR 656



 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 91/420 (21%), Positives = 156/420 (37%), Gaps = 72/420 (17%)

Query: 55   PKDLFPYDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGS 114
            PK L   D+ +   G PN  + F E +     +   S S P  +  SD   P A P   +
Sbjct: 767  PKPLMRRDQME---GSPNSSESF-EHIARSARDHAISLSEPRMLWGSDPY-PHAEPQQAT 821

Query: 115  D--ADEDDED-RGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRAR 171
               A E+ ED R   A+     TAA     +  ++   +D                   R
Sbjct: 822  TPKATEEPEDVRSEAALDQEQITAAYSVEHNQLEAHPKADF-----------------IR 864

Query: 172  KASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSA 231
            ++S    Q  +S S E+     +++   S     P++K  + AP+   +   + +  PS 
Sbjct: 865  ESSEAQVQKFLSRSVEDVRPHHTDANNQSACFEAPDQKT-LSAPQEERISAVESQ--PSR 921

Query: 232  SDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPR--- 288
              S S   +   KP+      SA     +S   DS          ++P E+P  KP+   
Sbjct: 922  KRSVSHGSNHTQKPDEQRSEPSAGIPKVTSRCIDS----------KEPIERPEEKPKKEG 971

Query: 289  ----GRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRR--L 342
                   PKPE+   S S           + W  R  + RRE    R   +   +++  L
Sbjct: 972  FIRSSEGPKPEKVYKSKSE----------TRWGPRPSSNRREEVNDRPVRRSGPIKKPVL 1021

Query: 343  REQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDS--E 400
            R+ ++E ++R+ +  ++ E          ++  + D P      +      P S     +
Sbjct: 1022 RDMKEEREQRKEKEGEKAEKVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPPPIQ 1081

Query: 401  PEAE---------LEREAKKSAKKP----QSSSTEPARKPGQKEKRVRPEEKQQAKPVKV 447
            PEAE         L ++  +  +KP     +   EPA K   ++    P  K++ +P KV
Sbjct: 1082 PEAEKFPSTETATLAQKPSQDTEKPLEPVSTVQVEPAVKTVNQQTMAAPVVKEEKQPEKV 1141



 Score = 35.4 bits (80), Expect = 0.17
 Identities = 65/314 (20%), Positives = 108/314 (34%), Gaps = 28/314 (8%)

Query: 166  VSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRA-----PRRGPL 220
            V KR R+  S+ D  S       + +S S+  K   ++  PE K  V+      P     
Sbjct: 1254 VPKRRRQRGSETDTDSEIHESASDKDSLSKG-KLPKREERPENKKPVKPHSSFKPDNHVR 1312

Query: 221  GGRKKKKAPSASDSDSKADSDGAKPEPVAMARSAS--SSSSSSSSSDSDVSVKKPPRGR- 277
               +  + P   D D        K EP    R  +            S  S  + P  R 
Sbjct: 1313 IDNRLLEKPYVRDDDKAKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRD 1372

Query: 278  ---KPAEKPLPKPR-GRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRR 333
                P +  +PKP  G  P+        ++D    + +R  +   R+  RR+      R+
Sbjct: 1373 NQWNPRQSEVPKPEDGEPPRRHEQFIPIAADKRPPKFERKFD-PARERPRRQRPTRPPRQ 1431

Query: 334  EQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGP 393
            ++    RRLRE+E   K            E  +  ++G       EPV   G     + P
Sbjct: 1432 DKPPRFRRLREREAASKSN----------EVVAVPTNGTVNNVAQEPVNTLGDISGNKTP 1481

Query: 394  P-SSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRK 452
              S+ +S  +A  E E    +           +K      +   +  +   P K E  ++
Sbjct: 1482 DLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQTVVKVGENVLPPKREIAKR 1541

Query: 453  RSEGFSMDRKVEKK 466
                FS  R V+++
Sbjct: 1542 ---SFSSQRPVDRQ 1552



 Score = 33.9 bits (76), Expect = 0.50
 Identities = 81/433 (18%), Positives = 151/433 (34%), Gaps = 54/433 (12%)

Query: 275  RGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRRE 334
            RG +   +  P+ R  KP+ E  PS      +  E         R E+   E+  +RRR+
Sbjct: 1209 RGGRGHTRDYPQYRDNKPRAEHIPSGPLRQREESET--------RSESSDFEVVPKRRRQ 1260

Query: 335  QEEEL-------RRLREQEKEEKERRRERADRGEAER----GSGGSSGDELREDDEPVKK 383
            +  E            +++   K +  +R +R E ++     S     + +R D+  ++K
Sbjct: 1261 RGSETDTDSEIHESASDKDSLSKGKLPKREERPENKKPVKPHSSFKPDNHVRIDNRLLEK 1320

Query: 384  RGRKGRGRGPPSSSDSEPEAELEREA-----KKSAKKPQSSSTEPA--RKPGQKEKRVRP 436
               +   +  P      P+ E  R       ++  + P    + P+  R+P  ++ +  P
Sbjct: 1321 PYVRDDDKAKPGFL---PKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNP 1377

Query: 437  EEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSP--DVK 494
             + +  KP   E  R+  +   +      K+ P  E K        +       P  D  
Sbjct: 1378 RQSEVPKPEDGEPPRRHEQFIPI---AADKRPPKFERKFDPARERPRRQRPTRPPRQDKP 1434

Query: 495  RCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANK--DVM-EKAAEVYTRLKSRVL 551
                 L E      +++++   T+   T+  + +   N   D+   K  ++  +  S   
Sbjct: 1435 PRFRRLREREAASKSNEVVAVPTN--GTVNNVAQEPVNTLGDISGNKTPDLSNQNSSDQA 1492

Query: 552  GPKIEAVQKVNKAGMEKEKAEEKLAGEEL-----AGEEA-PQEKAEDKPSTDLSAPV--- 602
              + E   + +     +E+ E+K A          GE   P ++   K S     PV   
Sbjct: 1493 NEEWETASESSDFNERRERDEKKNADLNAQTVVKVGENVLPPKREIAKRSFSSQRPVDRQ 1552

Query: 603  -----NGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGSDRQERE 657
                 NG   S +  S    E   G  S+ G R G  +D      G DL    S   +  
Sbjct: 1553 NRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKR-GPFDDQPAGTTGVDLINGSSAHHQEG 1611

Query: 658  RARGDSEALDEES 670
               G  +   ++S
Sbjct: 1612 VPNGTGQKNSKDS 1624



 Score = 33.1 bits (74), Expect = 0.85
 Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 17/152 (11%)

Query: 335  QEEELRRLREQEKEEKE-----RRRERADRGEAERGSGG--------SSGDELREDDEPV 381
            QEE +  +  Q   ++         ++ D   +E  +G          S + +   +E  
Sbjct: 908  QEERISAVESQPSRKRSVSHGSNHTQKPDEQRSEPSAGIPKVTSRCIDSKEPIERPEEKP 967

Query: 382  KKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEK---RVRPEE 438
            KK G      GP      + ++E     + S+ + +  +  P R+ G  +K   R   EE
Sbjct: 968  KKEGFIRSSEGPKPEKVYKSKSETRWGPRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEE 1027

Query: 439  KQQAKPVKVERTRKRSEGFSM-DRKVEKKKEP 469
            ++Q K  + E+  K +E   +   K EKK  P
Sbjct: 1028 REQRKEKEGEKAEKVTEKVVVKPEKTEKKDLP 1059



 Score = 30.8 bits (68), Expect = 4.2
 Identities = 38/180 (21%), Positives = 66/180 (36%), Gaps = 35/180 (19%)

Query: 222 GRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAE 281
           G  ++  P A+    KA++ G  P    + +  +  +S     + + + + PP   KP  
Sbjct: 49  GISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKTPEVPPAQPKPGV 108

Query: 282 KPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQE-EELR 340
                     P+    P S +S+    + D I              +   + +QE   L+
Sbjct: 109 -------AAPPEVAPAPKSWASNKQGGQGDGI--------------QVNSQFQQEFPSLQ 147

Query: 341 RLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSE 400
              +QEK+EKE   +               G  LR  +    + G  G+  G PSSSD +
Sbjct: 148 AAGDQEKKEKETNDDNY-----------GPGPSLRPPNVACWRDG--GKAAGSPSSSDQD 194



 Score = 30.0 bits (66), Expect = 7.2
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 7/132 (5%)

Query: 163  KMSVSKRARKASSDLDQ--ASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPL 220
            K + +++ R  +S L    A    +  + ++SS+     +     P   A+V A    PL
Sbjct: 1711 KKNANEKGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVPASTSAPL 1770

Query: 221  GGR-----KKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPR 275
                        AP  + + +   +  + P P +     S+S+S S+S  +  S      
Sbjct: 1771 PATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITS 1830

Query: 276  GRKPAEKPLPKP 287
               PA  P P P
Sbjct: 1831 SSAPASAPAPTP 1842


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 85/305 (27%), Positives = 123/305 (40%), Gaps = 33/305 (10%)

Query: 181 SVSPSEEENSESSSESEKTSDQ--DFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKA 238
           S +PS+E +   S  S K  D     +P K++      R   G   K++  S S S +KA
Sbjct: 356 SRNPSKERSHSHSRSSSKERDHRGSSSPRKESG-----RSQSGSPNKQRDHSRSRSPNKA 410

Query: 239 DSDGAKPEPV-AMARSASSSSSSS---SSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKP 294
                   P  A  RS S S + +   S S S    +   R R P  K     R R P  
Sbjct: 411 RDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSP-NKARDHSRSRSPNK 469

Query: 295 ERPPSSSSSDSDSDEVDRI-SEWKRRDEARRR----ELEARRRRE--QEEELRRLREQEK 347
            R  S S S S   +  ++ S  K RD  R R    E + R+ R   +E + RR R   K
Sbjct: 470 ARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSK 529

Query: 348 EEKERRRERADRGEAERGSGGSSGDEL--REDDEPVKKRGRKGRGRGPPSSSDSEPEAEL 405
           E ++RR+ R+   E +R    S  +E   R+   P K+R R+ R R P            
Sbjct: 530 E-RQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRR-RWRSPSK---------- 577

Query: 406 EREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEK 465
           ERE ++S    +      +R P ++    RP    + K     RT  +    S  R   K
Sbjct: 578 ERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSK 637

Query: 466 KKEPS 470
           + +PS
Sbjct: 638 ESDPS 642



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 91/377 (24%), Positives = 147/377 (38%), Gaps = 26/377 (6%)

Query: 133 ATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSES 192
           +T +  +  S S S + S +   KR    ++    KR    +    +  +      +S+S
Sbjct: 273 STRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQS 332

Query: 193 SSESE-KTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKA-DSDGAKPEPVAM 250
            S S+ K+ +Q  TP +  +    R        K+++ S S S SK  D  G+       
Sbjct: 333 RSHSKGKSQNQSRTPRRGRSHNWSRNP-----SKERSHSHSRSSSKERDHRGSSSPRKES 387

Query: 251 ARSASSSSSSS---SSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDS 307
            RS S S +     S S S    +   R R P  K   + R R P   R  S S S   +
Sbjct: 388 GRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPY-KARDRSRSRSPNKARDCSRSRSPYKA 446

Query: 308 DEVDRI-SEWKRRDEARRRELEARRRREQEEELRRLREQEK-----EEKERRRERADRGE 361
            +  R  S  K RD +R R     R R +     + R+  +     +E++ RR R+   E
Sbjct: 447 RDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKE 506

Query: 362 AERGSGGSSGDEL--REDDEPVKKRGRKGRGRGPPSSSD---SEPEAELEREAKKSAKKP 416
            +     SS  E   R    P K+R R+ + R P    D   S   +E ERE ++S    
Sbjct: 507 RQCRQSRSSSKERDHRRSRSPSKERQRR-QSRSPNKERDRSQSRSPSE-EREHRQSRSPS 564

Query: 417 QSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQ 476
           +       R P ++ +R +     + +     R+  +  G+S  R   K+K  S      
Sbjct: 565 KERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPS 624

Query: 477 K--LHSEIKFALKVDSP 491
           K   HS+ + + K   P
Sbjct: 625 KEGNHSQSRTSSKESDP 641



 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 108/616 (17%), Positives = 216/616 (35%), Gaps = 59/616 (9%)

Query: 86  NNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSD 145
           ++P  S      ++ S S  P A+P     A            + V    A+ R    S 
Sbjct: 2   SSPKRSSKPSMSLAPSGSSMPTADPKP--PASLKSTKSATPNRSLVPTKPATSRNSVMSP 59

Query: 146 SDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFT 205
           S   S  S   ++ P+ + S   R R  +        +PS       +S++ K SD    
Sbjct: 60  SSSKSTKSTSTKRAPSNRPSSRSRVRSKAR-------TPSRVSTDTRTSKASKASDVRCH 112

Query: 206 PEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSS-------- 257
             +    R    G  G R  K++PS + +  +  + GA+P   +  R+ +S         
Sbjct: 113 QRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKS 172

Query: 258 -----SSSSSSSDS---DVSVK--KPPRGR---KPAEKPLPKPRGRKPKPERPPSSSSSD 304
                +S+   SDS   ++S K  +PP G    + +E  +     +   P   PS   SD
Sbjct: 173 YGRPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKSD 232

Query: 305 SDSDEVDR-ISEW------KRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERA 357
           + S    R +  +       R       E+ +R +   +   R   +   + +  RR R+
Sbjct: 233 NPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRS 292

Query: 358 DRGEAERGSGGSSGDELREDDEPVKKRGRKG----RGRGPPSSSDSEPEAELEREAKKSA 413
             G  +R          + +    + R RKG     GR   S S S+ +++ +    +  
Sbjct: 293 --GSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRG 350

Query: 414 KKPQSSSTEPARKPGQKEKRVRPEEKQQ--AKPVKVERTRKRSEGFSMDRKVEKKKEPSV 471
           +   + S  P+++      R   +E+    +   + E  R +S   +  R   + + P+ 
Sbjct: 351 RS-HNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNK 409

Query: 472 EEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKA 531
                +  S  K   +  S    +  +        +   +   ++ +      + R    
Sbjct: 410 ARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNK 469

Query: 532 NKDVMEKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAE 591
            +D     +    R  S++  P  E   + +++  ++ +  +  +  +       +  ++
Sbjct: 470 ARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSK 529

Query: 592 DKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGS 651
           ++      +P      SQ    +E++EH + R         S     D R      R  S
Sbjct: 530 ERQRRQSRSPNKERDRSQSRSPSEEREHRQSR---------SPSKERDRRRW----RSPS 576

Query: 652 DRQERERARGDSEALD 667
             +ER ++R  SE  D
Sbjct: 577 KERERRQSRSSSEERD 592



 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 110/546 (20%), Positives = 190/546 (34%), Gaps = 44/546 (8%)

Query: 91  SYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSS 150
           SY  P   +   S++   N +  S         G  +  AVT + A  +  +   S + S
Sbjct: 172 SYGRPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKS 231

Query: 151 DNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKA 210
           DN      +P+    V    +      ++ S SP+E  +   S     T  +   P+  +
Sbjct: 232 DNP-----SPSSSRKVKSYGQMIIPSREK-SYSPTEMSSRVKSYNQASTRSR---PQSHS 282

Query: 211 AVRAPRRGPLGGRKKKKAPSASDS----DSKADSDGAKPEPVAMARSASSSSSSSSSSDS 266
             R+PRR   G +K+  +   S S     S+A S   K     M R + S S S   S +
Sbjct: 283 QSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQN 342

Query: 267 DVSVKKPPRGR-----KPAEKPLPKPRGRKPKPERPPSSSSSD-SDSDEVDRISEWKRRD 320
               + P RGR     +   K       R    ER    SSS   +S      S  K+RD
Sbjct: 343 QS--RTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRD 400

Query: 321 EARRRELEARRRREQEEELRRLREQEKEEKERRRERADRG----EAERGSGGSSGDELRE 376
            +R R     R R +     + R++ +     +     R     +A   S   S ++ R+
Sbjct: 401 HSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARD 460

Query: 377 DDE---PVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKR 433
                 P K R R  R R P    D        +E  +  ++ +S S E   +  +   +
Sbjct: 461 HSRSRSPNKARDRS-RSRSPSKERDHSQLGSPSKE--RDHRRSRSPSKERQCRQSRSSSK 517

Query: 434 VRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDV 493
            R   + ++   + +R + RS     DR   +      E +  +  S+ +   +  SP  
Sbjct: 518 ERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSK 577

Query: 494 KR----CLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSR 549
           +R      ++ EE    +  S   Q          K + +  ++   ++     +R  S+
Sbjct: 578 ERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSK 637

Query: 550 VLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQ 609
              P    V +        +          L+    P + +   PST    P  G+  SQ
Sbjct: 638 ESDPSQSTVPR------SPDWKRSPTRTSSLSQNRTPSKTSSHSPST---FPSGGQTLSQ 688

Query: 610 KGESAE 615
               A+
Sbjct: 689 DDSQAD 694



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 48/245 (19%), Positives = 80/245 (32%), Gaps = 10/245 (4%)

Query: 71  PNKRKGFNEGLWEIQNNPHASYSAPPPV-----SSSDSEAPEANPADGSDADEDDEDRGV 125
           PNK +  +      +   H+   +P        S S S+  +   +  S  + D      
Sbjct: 467 PNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRS 526

Query: 126 MAVTAVTATAASDRMESDSDSDKS-SDNSGLKRKTPALKMSVSKRARKASSDLDQASVSP 184
            +       + S   E D    +S S+    ++     K    +R R  S + ++     
Sbjct: 527 PSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRS 586

Query: 185 SEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAK 244
           S EE   S S S         P   +  +A  R     ++   + S + S     S    
Sbjct: 587 SSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTV 646

Query: 245 PEPVAMARSASSSSS-SSSSSDSDVSVKKP---PRGRKPAEKPLPKPRGRKPKPERPPSS 300
           P      RS + +SS S + + S  S   P   P G +   +   +      K   P   
Sbjct: 647 PRSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQADATTSKATLPGER 706

Query: 301 SSSDS 305
           SSS S
Sbjct: 707 SSSSS 711


>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 35/236 (14%)

Query: 283 PLPKPRGRKPKPERPPS----SSSSDSDSD----EVDRISEW--KRRDEARRRELEARRR 332
           PL   RGR    E P S     +  D+D D    E DR+ E   K RD  R+R+ E RR+
Sbjct: 46  PLDFSRGRLGSQESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRK 105

Query: 333 ---------REQEEELRRLREQEKE---------------EKERRRERADRGEAERGSGG 368
                    RE++ E+ R RE+EK+               +++R +ER  + E +R    
Sbjct: 106 EKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQR 165

Query: 369 SSGDELREDDEPVKKRGRKG-RGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKP 427
            +  E   D E  K++ R+  R R     ++ E E + +RE  +  K       E  R+ 
Sbjct: 166 ETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREG 225

Query: 428 GQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIK 483
            ++  R R  ++ + +  + +R R R E    +RK E+KKE   ++K +K   + K
Sbjct: 226 ERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKK 281



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 49/218 (22%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 264 SDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEAR 323
           +D D   ++  R R+  EK   + R R  +  R    ++ + D ++   I   + R++ +
Sbjct: 72  ADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQK 131

Query: 324 RRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGGSSGDELREDDEPVKK 383
            RE E  R RE+E      R++++E++  R+   DR            D  RE  +  + 
Sbjct: 132 GRERERDRGRERE------RDRDREKERERQTEKDRDGQRETETERERDREREKQKERET 185

Query: 384 RGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRP----EEK 439
              + R R      + + + E +R+ K   ++ + +  E  R+  ++ +R R     +E+
Sbjct: 186 ERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKER 245

Query: 440 QQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQK 477
            + +  K ER ++R +    +RK +KK+E   E+K +K
Sbjct: 246 DRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283



 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 33/257 (12%)

Query: 217 RGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRG 276
           RG LG ++  ++     +   AD D  + E   +              D +       R 
Sbjct: 51  RGRLGSQESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRE-------RR 103

Query: 277 RKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKR---RDEARRRELEARR-- 331
           RK  E    + R ++ + ER            E DR  E +R   R++ R R+ E  R  
Sbjct: 104 RKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDG 163

Query: 332 RREQEEELRRLREQEKE-----EKERRRERADRGEAERGSGGSSGDELREDDEPVKKRGR 386
           +RE E E  R RE+EK+     E++R R+R    E ER +      + +   E  ++  R
Sbjct: 164 QRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDR 223

Query: 387 KG-----RGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQ 441
           +G     R R      D   E + ER+ K+  KK +    +  RK  +KE++ R ++K  
Sbjct: 224 EGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKK-- 281

Query: 442 AKPVKVERTRKRSEGFS 458
                    RK  EG S
Sbjct: 282 ---------RKWGEGIS 289



 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 30/266 (11%)

Query: 176 DLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSD 235
           D  +  +   E   S    ++ K +D D    ++  VR            +K     D D
Sbjct: 48  DFSRGRLGSQESPRSWGLGQAHKDADGDDRQRERDRVR------------EKTEKERDRD 95

Query: 236 SKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE 295
            K D +  + E     R+      +    D +   +K     +   +   + R R+ + E
Sbjct: 96  RKRDRERRRKEKETN-RNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERE 154

Query: 296 RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRE 355
           R            E +R  + + R++ + RE E  R R+++ E  R R+ ++E ++R+R+
Sbjct: 155 RQTEKDRDGQRETETERERD-REREKQKERETERDRDRQRDTEKERERQTDRE-RDRQRK 212

Query: 356 RADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKK 415
                + E    G      RE D   +++  + RG+          E + ER+ K+  KK
Sbjct: 213 TQTERQRETDREGE-----RETDRRRERQRDRDRGK----------ERDRERDRKEERKK 257

Query: 416 PQSSSTEPARKPGQKEKRVRPEEKQQ 441
            +    +  RK  +KE++ R ++K++
Sbjct: 258 ERKKERKKERKEKKKEEKRREDKKRK 283



 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 6/221 (2%)

Query: 148 KSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPE 207
           K +D    +R+   ++    K  R      D+      +E N     E +   ++D   E
Sbjct: 70  KDADGDDRQRERDRVREKTEKE-RDRDRKRDRERRRKEKETNRNRDREKQTEIERDRERE 128

Query: 208 KKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSD 267
           K+      R       + +      +  ++ D DG +       R           ++ D
Sbjct: 129 KQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERD 188

Query: 268 VSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSD-EVDRISEWKRRDEARRRE 326
              ++     +  +    + R RK + ER      +D + + E DR  E ++RD  R +E
Sbjct: 189 RDRQRDTEKERERQTDRERDRQRKTQTER---QRETDREGERETDRRRE-RQRDRDRGKE 244

Query: 327 LEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSG 367
            +  R R++E +  R +E++KE KE+++E   R + +R  G
Sbjct: 245 RDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRKWG 285


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.302    0.123    0.335 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,422,962
Number of Sequences: 37866
Number of extensions: 1779997
Number of successful extensions: 41691
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 2026
Number of HSP's that attempted gapping in prelim test: 13167
Number of HSP's gapped (non-prelim): 13568
length of query: 670
length of database: 18,247,518
effective HSP length: 109
effective length of query: 561
effective length of database: 14,120,124
effective search space: 7921389564
effective search space used: 7921389564
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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