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Search of human proteins with 14195605
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
(776 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 1527 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 1204 0.0
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 1203 0.0
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 1203 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 1197 0.0
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 1194 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 1192 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 1182 0.0
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 1179 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 1165 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 1163 0.0
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 1163 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 1153 0.0
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 1135 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 1129 0.0
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 797 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 656 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 656 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 652 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 652 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 649 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 649 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 643 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 643 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 642 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 642 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 641 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 641 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 637 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 637 0.0
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 1527 bits (3954), Expect = 0.0
Identities = 776/776 (100%), Positives = 776/776 (100%)
Query: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS
Sbjct: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
Query: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE
Sbjct: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
Query: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV
Sbjct: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
Query: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP
Sbjct: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
Query: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE
Sbjct: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
Query: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS
Sbjct: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
Query: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT
Sbjct: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
Query: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP
Sbjct: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 1204 bits (3116), Expect = 0.0
Identities = 601/774 (77%), Positives = 682/774 (88%)
Query: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
ME G RQRQVL+ FV L S AG+E YSV EE E+G +ANL KDLGL + E++
Sbjct: 1 MEAGGERFLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELA 60
Query: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
R A+++S+GNKQH QL QTGDLL+NEKLDREELCGPTEPCILHFQ+L++NPL+ E
Sbjct: 61 ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNE 120
Query: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
LR+ID+NDHSP+F E EM LKI E++ GT PL +A DLDVG N++QNY I+P+SHF V
Sbjct: 121 LRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHV 180
Query: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
L RDGRKYPELVLDK LDREE+P+L LTLTALDGGSPPRSGTAQ+ I+V+DINDNAP
Sbjct: 181 LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAP 240
Query: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
EF QP+Y+V + EN+P+ S++ TVSA DLD G+ G ISY F SE+I KT ++NP+TG+
Sbjct: 241 EFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD 300
Query: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
++L K ++FE + SYEV I+A DGGGLSGK T+++QVVDVNDNPP++T+S++ SPIPENS
Sbjct: 301 MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS 360
Query: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
E V+AVFSVSD DSG+NG+ + SI+ +LPF LKPSV+NFYTLV+E ALDRE R+EYNIT
Sbjct: 361 GETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNIT 420
Query: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+T+TD+GTPRLKT++NITV +SDVNDNAP FTQ SYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
GTNAQVTYSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQP+LPLPEAAP Q QA+ LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNF 774
SVGRCS+PEGPFPG++VDVSGTGTLSQSYQYEVCLTGGS T+EFKFLKPIIPNF
Sbjct: 721 SVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF 774
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 1203 bits (3113), Expect = 0.0
Identities = 599/774 (77%), Positives = 685/774 (88%)
Query: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
MEI + R+RQVL+F VLL LS AG E YSV EETE GSFVANL +DLGLG+ E+S
Sbjct: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
Query: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
+R+AR++S NK++L L TG+LL+NEKLDR+ELCG TEPC+LHFQV++ENPL+ F+ E
Sbjct: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
Query: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
L V DINDHSP F +KE+++KI E + +G F + A DLDVGSN++QNY ISP+SHF +
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
Query: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
I + D + YPELVLD+ LD E+E +LRLTLTA+DGGSPP+SGT V I+V+DINDNAP
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
Query: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
EF Q +Y+VQ+PE+ PLGS +AT+SA+DLD G GKISYT F SEDI KT E+NP++GE
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
Query: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
V LR +DFE++ SY + I+ATDGGGLSGKCTLL++V+D+NDNPP+VT+S++T IPEN+
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
Query: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
E +VA+FS+ D DSG+NG+ I SIQ++LPF LKP+ KNF+TLV+E+ALDRE++AEYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
Query: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+TVTD+GTPRLKTE+NITV +SDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
GTNAQV YSLLPPQD HLPLASLVSINADNGHLFALRSLDYEAL+EFEFRV ATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQP+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNF 774
SVGRCS+PEGPFPG LVDVSGTGTLSQSYQYEVCLTGGS T+EFKFLKPIIPNF
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF 774
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 1203 bits (3112), Expect = 0.0
Identities = 607/765 (79%), Positives = 676/765 (88%), Gaps = 1/765 (0%)
Query: 10 RQRQVLVFFVLLSLSGAGA-ELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIIS 68
RQRQVL F+LL LS AGA E SYSVVEETE SFV NL KDLGL E S R R++S
Sbjct: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
Query: 69 QGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDIND 128
+GNK HLQL +T DLL+NEKLDRE+LCG TEPC+L FQVL+E+P E FQAEL+VIDIND
Sbjct: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
Query: 129 HSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDG 188
HSP+F +K+M++K+ E+SP GT FPL +A DLD+G NN++NY ISP+S+FRVL + DG
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
Query: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYK 248
RKYPELVLD LDREEE +LRLTLTALDGGSPPRSGTAQV IEVVD+NDNAPEF+QP Y+
Sbjct: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
Query: 249 VQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVD 308
VQI E+SP+ LV VSA D+D G NG+ISY+LFQ S++ISKT +V+ +TGE+RL+KQ+D
Sbjct: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
Query: 309 FEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVF 368
FE SYEV I+A D GG SGKCT+L+QV+DVND+ P+VTMSA TSPIPEN+PE VVA+F
Sbjct: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
Query: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428
SVSD DSG NGK SIQEDLPFLLK SV NFYTL+TE LDRE+RAEYN+T+TVTD+GT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429
Query: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
PRL T N+TV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548
SLLPPQDPHLPLASLVSIN DNGHLFALRSLDYEAL+ FEFRV A+DRGSPALSSEALVR
Sbjct: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549
Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPP SATATLH+LLVDGFSQ
Sbjct: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669
Query: 669 PFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMP 728
P+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGRCS+P
Sbjct: 670 PYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVP 729
Query: 729 EGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPN 773
EGPFPG LVDV GTG+LSQ+YQYEVCL GGS T+EF+FLKP++PN
Sbjct: 730 EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPN 774
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 1197 bits (3098), Expect = 0.0
Identities = 609/768 (79%), Positives = 675/768 (87%), Gaps = 2/768 (0%)
Query: 10 RQRQVLVFFVLLSLSGAGA-ELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIIS 68
RQRQVL F+LL LS AGA E SYSVVEETE SFV NL KDLGL E S R R++S
Sbjct: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
Query: 69 QGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDIND 128
+GNK HLQL +T DLL+NEKLDRE+LCG TEPC+L FQVL+E+P E FQAEL+VIDIND
Sbjct: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
Query: 129 HSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDG 188
HSP+F +K+M++K+ E+SP GT FPL +A DLDVG NN++NY ISP+S+FRVL + DG
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
Query: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYK 248
RKYPELVLDK LDREEE +LRLTLTALDGGSPPRSGTAQV IEV+D+NDNAPEFEQP Y+
Sbjct: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
Query: 249 VQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVD 308
VQI E+SP+G LV VSA D+D G NG+ISY+LFQ SE+I KT ++NP+TGE+ L+KQ+D
Sbjct: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
Query: 309 FEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVF 368
FE + SYEV I+A D G SGKCT+L+QV+DVND+ P+VTMSA TSPIPEN+PE VVA+F
Sbjct: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
Query: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428
SVSD DSG NGK SIQEDLPFLLK S +NFYTL+TER LDRE+RAEYNIT+TVTD+GT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428
Query: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
P L T+ N+TV I+DVNDNAP FTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTY
Sbjct: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488
Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548
SLLPPQDPHLPL SLVSINADNGHLFALRSLDYEAL+ F+FRV A+D GSPALSSEALVR
Sbjct: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548
Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
V+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
ATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
Query: 669 PFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMP 728
P+LPLPEAAP Q QA+ LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC +P
Sbjct: 669 PYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVP 728
Query: 729 EGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
EGP PG LVD+SGT TLSQSYQYEVCL GGS T+EFKFLKPIIPNF P
Sbjct: 729 EGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPP 776
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 1194 bits (3088), Expect = 0.0
Identities = 596/763 (78%), Positives = 674/763 (88%)
Query: 11 QRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQG 70
QRQVL+ +LL ++ AG E YSV+EETERGSFVANL DLGLG+ E++ R AR++S+
Sbjct: 11 QRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSED 70
Query: 71 NKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHS 130
N+Q LQL QTG L++NEKLDRE+LCGPTEPCI+HFQVL++ PLE+F+AEL V DINDHS
Sbjct: 71 NEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHS 130
Query: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRK 190
P F E+EM LKIPE S LGT FPL A DLDVGSNNVQNY ISP+SHF V DGRK
Sbjct: 131 PEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRK 190
Query: 191 YPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQ 250
YPELVLD ELDREE+ +LRLTLTA+DGGSPPRSGT Q+ I V+D NDNAPEF Q +Y+VQ
Sbjct: 191 YPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQ 250
Query: 251 IPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFE 310
+PENSP+GSLV VSARDLD G NG+ISY+L+ S++I K E++ ++GE+RL K++DFE
Sbjct: 251 VPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFE 310
Query: 311 MVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFSV 370
++SY++ I+A+DGGGLSGKC++ ++V+DVNDN P++++S+LTSPIPENSPE VA+F +
Sbjct: 311 TMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEVALFRI 370
Query: 371 SDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPR 430
D DSG NGK I SIQ+D+PF LKPSV+NFY LVTE ALDRE RAEYNIT+T+TD+GTPR
Sbjct: 371 RDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPR 430
Query: 431 LKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
LKTE +ITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL
Sbjct: 431 LKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
Query: 491 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVL 550
LPP+DPHLPL SLVSIN DNGHLFAL+SLDYEAL+ FEFRV ATDRG PALSSEALVRVL
Sbjct: 491 LPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVL 550
Query: 551 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT
Sbjct: 551 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
Query: 611 EPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPF 670
EPGLFGVWAHNGEVRTARLLSERD AK RLVVLVKDNGEPPRSATATL VLLVDGFSQP+
Sbjct: 611 EPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPY 670
Query: 671 LPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPEG 730
LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAASVGRCS+PEG
Sbjct: 671 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRCSVPEG 730
Query: 731 PFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPN 773
PFPG LVDVSGTGTLSQSYQYEVCLTGGSE+++FKFLKPI PN
Sbjct: 731 PFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN 773
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 1192 bits (3084), Expect = 0.0
Identities = 595/765 (77%), Positives = 673/765 (87%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
+QRQVL+FFVLL ++ A + YSV EETE GSFVANL KDLGL + E++ R AR++S+
Sbjct: 12 KQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVSK 71
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
G K HLQ QTGDLL+NEKLDREELCGPTEPC+L FQVL+ENPL+ FQAELR+ D+NDH
Sbjct: 72 GKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVNDH 131
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
SP+F +KE++LKIPE+ GT F + A DLDVG+N++QNY ISP+ HF + + + DG
Sbjct: 132 SPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDGI 191
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
P+LVL++ LDREE+P++RLTLTALDGGSPPRSGTA VRIEVVDINDN PEF + +Y+V
Sbjct: 192 ILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYEV 251
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
QIPE+SP+GS VA VSARDLD G NG+ISY Q SEDI KT ++ +GE+ LR+++DF
Sbjct: 252 QIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLDF 311
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369
E + +Y V I+ATDGGGLSG C + +QV+D+NDNPP++TMS L + IPEN + ++AVFS
Sbjct: 312 ESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVFS 371
Query: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
VSDPDSG+NG+ + SIQ+DLPF LKPSV+NFYTLV ALDRE R+EYNIT+TVTD GTP
Sbjct: 372 VSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGTP 431
Query: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
RLKTEHNITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS
Sbjct: 432 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 491
Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
LLPPQDPHLPLASLVSINADNGHLFAL+SLDYEAL+ FEFRV A DRGSPALSSEALVRV
Sbjct: 492 LLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVRV 551
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 552 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLL ERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 612 TEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 671
Query: 670 FLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPE 729
+L LPEAAP Q QA+ LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS+PE
Sbjct: 672 YLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 731
Query: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNF 774
GPFPG++VDVSGTGTLSQSYQYEVCLTGGS T+EFKFLKPIIPNF
Sbjct: 732 GPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF 776
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 1182 bits (3058), Expect = 0.0
Identities = 596/776 (76%), Positives = 666/776 (85%), Gaps = 1/776 (0%)
Query: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
ME ++RQV+ +LL L AG+E YS+ EETE G VANL KDLGLG+ E++
Sbjct: 1 METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
Query: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
TR AR+ +GNK+ LQL +TG+LL+ EKLDRE +CG TEPCILHFQ+L+ENP++ FQ +
Sbjct: 61 TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
Query: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
L++ DINDH+P F EKEM+LKIPE++ GT FPL A D D+GSN VQNY ISP+SHF V
Sbjct: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
Query: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
H DGRKYPELVLDK LDREE P+L LTLTALDGG+PPRSGT +RI V+D NDNAP
Sbjct: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
Query: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
EF Q Y+VQ+PENSPL SLV VSARDLD GA G ++Y LFQ +++++ ++ T E
Sbjct: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQ-GDEVTQPFVIDEKTAE 299
Query: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
+RL++ +DFE Y V I ATDGGGLSGKCT+ ++VVDVNDN P++TMS L+SP PEN+
Sbjct: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
Query: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
PE VVAVFSVSDPDSG+NG+ I SIQ DLPFLLKP++KNFYTLVT+R LDRE++AEYNIT
Sbjct: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
Query: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+TVTDMGTPRLKTEHNITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
GTNAQVTYSLLPPQ+PHL LASLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPA
Sbjct: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
Query: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQP+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
Query: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
SVGRCS+PEGPFPG LVDVSGTGTLSQSY YEVCLTG S EFKFLKPIIPN P
Sbjct: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLP 775
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 1179 bits (3049), Expect = 0.0
Identities = 592/767 (77%), Positives = 672/767 (87%), Gaps = 1/767 (0%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
++RQV F +L+ G+E YSV+EETE G+FVANL KDLGL + E+++R AR++ +
Sbjct: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
GN+QHLQ QT DLL+NEKLDREELCG TEPC+L FQVL+ENPL+ FQA LRV DINDH
Sbjct: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
+P F +EM+LKI E + G FPL A DLD GSN +Q Y IS + HF VL +GR
Sbjct: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
K+PELVLDK LDREE+PQLRLTL ALDGGSPPRSGT++++I+V+DINDN PEF Q +Y+
Sbjct: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Q+PEN+PLGSLV TVSARDLD G+ GK+SY LFQ +D+++ E+N +TGE+RLRK +DF
Sbjct: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDF 307
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369
E + SY+V ++ATDGGGLSGKC+L+++V+DVNDN P++TMS S IPEN PEI VAVFS
Sbjct: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
Query: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
VSD DSG+N + I SI+ +LPFLL+PSV+NFYTLVTE ALDRE+RAEYNIT+TVTD+GTP
Sbjct: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
Query: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
RLKT+ +ITVQ+SDVNDN P FTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYS
Sbjct: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
LLPPQDPHLPL+SLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPALSSEALVR+
Sbjct: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
Query: 670 FLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPE 729
+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR S+PE
Sbjct: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
Query: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
GPFPG LVDVSGTGTLSQSYQY+VCLTGGSET+EFKFLKPI+PNF P
Sbjct: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPP 774
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 1165 bits (3013), Expect = 0.0
Identities = 583/762 (76%), Positives = 656/762 (86%)
Query: 12 RQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGN 71
RQVL F +++ LS E YSV+EETE GSFVA+L KDLGLG+ E+++R AR++S +
Sbjct: 11 RQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDDD 70
Query: 72 KQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSP 131
KQ LQL QTGDLL+ EKLDREELCGP EPC+LHFQV +E P++ FQ EL + DINDHSP
Sbjct: 71 KQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHSP 130
Query: 132 MFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKY 191
+F E+E++LKI ENS GT FPL A DLDVGSN +Q Y ISP+SHF +L +G+KY
Sbjct: 131 IFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKKY 190
Query: 192 PELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQI 251
P+LV DK LDREE+P+ LTL ALDGGSPPRSGT VRI ++DINDNAPEF Y VQ+
Sbjct: 191 PDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQV 250
Query: 252 PENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEM 311
ENSPL S + V ARD+D G G +SY LFQ S++I +T +N +TGE+ L+K++DFE
Sbjct: 251 LENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFEK 310
Query: 312 VTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFSVS 371
+ SY V I+ATDGGGLSGK T++++VVDVNDNPP++ +S+LTS IPEN+PE VV++F +
Sbjct: 311 IKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVSIFRIR 370
Query: 372 DPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPRL 431
D DSG NGK I SI ++LPF+LKP++KNFYTLVTER LDRE AEYNIT+ VTD+GTPRL
Sbjct: 371 DRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTPRL 430
Query: 432 KTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
KT+ NITVQ+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL
Sbjct: 431 KTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLV 551
PPQDPHLPLASLVSINADNGHLFALRSLDYEAL+ FEFRV A+DRGSPALSSEALVRVLV
Sbjct: 491 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLV 550
Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
LD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 551 LDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 610
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPFL 671
PGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP+L
Sbjct: 611 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 670
Query: 672 PLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPEGP 731
PLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS+PEGP
Sbjct: 671 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGP 730
Query: 732 FPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPN 773
FPG LVDVSGTGTLSQSYQYEVCLTG S T EFKFLKPI PN
Sbjct: 731 FPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPN 772
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 1163 bits (3009), Expect = 0.0
Identities = 587/776 (75%), Positives = 660/776 (85%)
Query: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
ME G + RQVL+FFVLL +S AG+E G++ V+EE + GSFV NL K LGL ++E+S
Sbjct: 1 MENGGAGTLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELS 60
Query: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
+R AR++S NK+ LQL TGDLL+ E LDREELCG EPC+L+FQVLM+NP + Q E
Sbjct: 61 SRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIE 120
Query: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
L+V DINDHSP+F EKEM+L+IPENSP+G F L A DLDVG N V++Y I+P+SHF V
Sbjct: 121 LQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHV 180
Query: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
I D RKYPELVLDK LD EE P+L LTALDGGSPPRSGTA VR+ VVDINDN+P
Sbjct: 181 KIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
EFEQ Y+V+I ENS LGSLV TVSA DLD G N ++SYT SEDI KT E+N +G+
Sbjct: 241 EFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGD 300
Query: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
+ L +DFE + SY + I+ATDGGGL GK T+ +QV+DVNDN P++T+S++TSPIPEN+
Sbjct: 301 ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENT 360
Query: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
PE VV VF + D DSG+NGK + SI ED+PF+LK SV N+YTL TER LDRE+RAEYNIT
Sbjct: 361 PETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNIT 420
Query: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+TVTD+GTPRLKTEHNITV +SDVNDNAP FTQTSY LFVRENNSPALHIGS+SATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDS 480
Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
GTNAQV YSLLP QDPHLPLASLVSINADNGHLFALRSLDYEAL+ F+FRV ATD GSPA
Sbjct: 481 GTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQP+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
VGRCS+PEGPFPG LVDVSGTGTLSQSY YEVC+TGGS +++FKFLKPIIPNF P
Sbjct: 721 PVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLP 776
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 1163 bits (3008), Expect = 0.0
Identities = 586/773 (75%), Positives = 659/773 (85%)
Query: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
ME ++ RQVL+ FVLL +S AG+E S+SV EE + GSFV NL KDLGL + E+S
Sbjct: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
Query: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
+R AR++S KQ LQL TGDLL++E LDREELCG EPC+LH QVLM+NP + Q E
Sbjct: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
Query: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
L+V DINDHSP+F+EK+M+L+IPENSP+G F L A DLDVG N V++Y ISP+SHF +
Sbjct: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
Query: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
+ D RKYPELVLDK LD EE P+L L+ALDGGSPPRSGTA VR+ VVDINDN+P
Sbjct: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
EFEQ Y+V+I ENS LGSL+ VSA DLD G NG+I YT SEDI KT E+N +GE
Sbjct: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
Query: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
+ LR +DFE + SY + I+ATDGGGL GK T+++ V+DVNDN P++T+S++TSPIPEN+
Sbjct: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
Query: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
PE VV VFS+ D DSG+NG+ + SI EDLPF+LK SV+N+YTL TER LDRE+ AEYNIT
Sbjct: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
Query: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+TVTD+G PRLKTEHN TV +SDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
GTNAQV YSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEAL+ F+FRV ATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQP+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPN 773
SVG CS+P+GPFPG LVDVSGTGTLSQSYQYEVCLTGGSET+EFKFLKP+IPN
Sbjct: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPN 773
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 1153 bits (2982), Expect = 0.0
Identities = 572/767 (74%), Positives = 657/767 (85%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
RQRQVL F+ +S AG+ G YSV EETE+GSFV NL KDLGL E++ R R++S
Sbjct: 10 RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
NKQ+L L + TG+LL NEKLDRE+LCGP EPC+L+FQ+LM++P +I++AELRV DINDH
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
SP+F KEM+LKI EN+ GT F L A D D G N++QNY IS +S F + I +G
Sbjct: 130 SPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGM 189
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
YPELVLDK LDREE+ +L LTLTALDGGSP RSGT+ +RI V+D+NDNAP+F Q +Y+
Sbjct: 190 IYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYET 249
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Q PENSP+GSL+ VSA D D G N ++SY+ F SEDI T ++NP +GE+ LR+ +D+
Sbjct: 250 QAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDY 309
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369
E+V SY++ I+A DGGGLS +CT+L++V+D NDNPP++ +S+L++ + ENSP IV+AVF
Sbjct: 310 ELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVFK 369
Query: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
+ D DSG NGKTI +Q++LPF LKPSV NFY L+TE ALDRE++AEYNIT+TVTD+GTP
Sbjct: 370 IKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTP 429
Query: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
RLKTEH+IT+Q+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS
Sbjct: 430 RLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
LLPPQDPHLPLASLVSINADNGHLFALRSLDYEAL+ F+FRV A+DRGSPALSSEALVRV
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRV 549
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
Query: 670 FLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPE 729
+LPLPEAAP Q QA+ LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCS+PE
Sbjct: 670 YLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 729
Query: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
GPFPG LVDVSGTGTL QSYQYEVCLTGGSET EFKFLKPI P+ P
Sbjct: 730 GPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPP 776
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 1135 bits (2936), Expect = 0.0
Identities = 572/767 (74%), Positives = 655/767 (85%), Gaps = 2/767 (0%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
++RQVL V L +S AGAE Y V EETERG+F+ NL KDLGLG+ E+ R RI+S
Sbjct: 10 QKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSD 69
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
N Q L L + TGDLL+NEKLDREELCGP EPC+L FQ+L+E P +IF+AEL V DINDH
Sbjct: 70 QNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDH 129
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
+P+F ++E+ LKI E++ G F L A D DVG+N++ NY ISP+++F + +H+ +G
Sbjct: 130 APVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGN 189
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
YPELVL++ LDREE P+ LTLTALDGGSPPRSGTA VRI V+D+NDNAP+F + +YKV
Sbjct: 190 IYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKV 249
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Q+PENSP+GS+V +VSARDLD G+NG+I+Y +E I KT ++NP +G + L+ Q+D+
Sbjct: 250 QVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDY 309
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369
E + +Y + I+A DGGGLSGKCT+++ V D+NDN P++ +S+LTSPI ENSPE VVAVF
Sbjct: 310 EAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVVAVFR 369
Query: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
+ D DSGNNGKT+ SIQ+D+PF+LKPSV+NFYTLVTE+ LDRE EYNIT+TVTD+GTP
Sbjct: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429
Query: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
RLKTEHNITV +SDVNDNAP FTQTSYTLFVRENNSPAL IGSVSATDRDSGTNAQV YS
Sbjct: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489
Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
LLP QDPHLPLASLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPALSSEALVRV
Sbjct: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
Query: 670 FLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPE 729
+L LPEAAP QANSLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA VGRCS+PE
Sbjct: 670 YLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRCSVPE 727
Query: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
GPFP LVD+SGTGTLSQSYQYEVCLTGGS T+EFKFLKPIIPN P
Sbjct: 728 GPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLP 774
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 1129 bits (2920), Expect = 0.0
Identities = 564/764 (73%), Positives = 647/764 (84%), Gaps = 2/764 (0%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
RQRQVL F+ +S AG+ G YSV EETE+GSFV NL KDLGL E++ R R++S
Sbjct: 10 RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
NKQ+L L + TG+LL NEKLDRE+LCGP EPC+L+FQ+LM++P +I++AELRV DINDH
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
+P+F +KE +LKI EN+ GT F L A D D G N +QNY ISP+S F + I +G
Sbjct: 130 APVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGM 189
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
YPELVLDK LDREE+ +L LTLTALDGGSP RSGT+ VRI V+D+NDNAP+F Q +Y+
Sbjct: 190 IYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYET 249
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Q PENSP+G L+ V A D+D G N ++SY+ F SE+I T ++NP +GE+ LR+ +D+
Sbjct: 250 QAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDY 309
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369
E+V SY++ I+A DGGGLS +C +L++V+D NDNPP++ +S+ ++ + ENSPE +AVF
Sbjct: 310 ELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFK 369
Query: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
++D DSG NGK + IQE+LPFLLKPSV+NFY L+TE ALDRE RAEYNIT+TVTD+GTP
Sbjct: 370 INDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTP 429
Query: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
RLKTEHNITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS
Sbjct: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
LLPPQDPHLPLASLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPALS EALVRV
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRV 549
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLH+LLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQP 669
Query: 670 FLPLPEAAPGQTQANS--LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSM 727
+LPLPEAAP Q QA + LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCS+
Sbjct: 670 YLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSV 729
Query: 728 PEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPII 771
PEGPFPG LVDV G TLSQSYQYEVCLTGG TSEFKFLKP+I
Sbjct: 730 PEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVI 773
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 797 bits (2058), Expect = 0.0
Identities = 400/769 (52%), Positives = 546/769 (71%), Gaps = 4/769 (0%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
+ RQV + L +S A YSV EE E GSFVAN+ KDLGL + +++ R AR++S+
Sbjct: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
GNK H +L +TGDL + EKLDRE LCG +PC+LHF+V++ PL+ F+AE+RV DIND+
Sbjct: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
+P+F KE +LKIPE++PLG+ FPL A DLDVG N +QNY +S + +F + G
Sbjct: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
KY ELVL+K LDREE+P++ LT+TA+DGGSPP+SGTA + + V+D+ND+ P+F + +Y+
Sbjct: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Q+ ENSP GSLVATV+A DLD G N I+Y+L Q E I KT +++P GEVRLR +DF
Sbjct: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS-PEIVVAVF 368
E + +Y++ I+ATDGGGLS +L++VVDVNDNPP+V +S+++SP+PE+S P+ VVA+F
Sbjct: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
Query: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428
++ D D GK ++EDLPF++KP+ N Y+LVT+R+LDRE + YNIT+ D G
Sbjct: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
Query: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
P L E I V ISDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548
SLLPP++ L + + +SIN+ NG L+ALR++DYEA+++F+F V ATD G +LSS+ VR
Sbjct: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
AT+ GLF V NGE+ T R +SERD Q+L++LV+D+G+P S T +L++LLVDGFS+
Sbjct: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
Query: 669 PFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGRC 725
P+L + + N T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
Query: 726 SMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNF 774
+ F LV G G+LS+ YE+C G+ SEF+FLK +PNF
Sbjct: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNF 778
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 656 bits (1693), Expect = 0.0
Identities = 360/765 (47%), Positives = 496/765 (64%), Gaps = 16/765 (2%)
Query: 17 FFVLLSLSGAGAELGS----YSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGNK 72
FF+L L G E + YSV EET++GSFV ++ KDLGL E++ R RIIS+G
Sbjct: 13 FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRT 72
Query: 73 QHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSPM 132
Q L ++G L+ ++DREE+C + C+++F +LME+ + ++ ++ +IDIND+ P
Sbjct: 73 QLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPR 132
Query: 133 FTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKYP 192
F +E+ +KI EN+ G FPL+ A D DVG+N++Q+Y++SP+ HF + + D KYP
Sbjct: 133 FLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYP 192
Query: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
ELVL++ LDREEE L LTA DGG PPRS TA +++ VVD+ND+ P F P Y+V +P
Sbjct: 193 ELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVP 252
Query: 253 ENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEMV 312
EN P+G+ + TV A DLD G NG+++Y+ + + + K +N +TGE+ + +D+E
Sbjct: 253 ENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEET 312
Query: 313 TSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVS 371
YE+ ++A DG G K +L+ V+DVNDN P+VTM++L+S IPE++P V+A+F +
Sbjct: 313 AFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQ 372
Query: 372 DPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPRL 431
D DSG NG+ +I E+LPF L+ S+ N+Y LVT + LDRE + YNITL TD GTP L
Sbjct: 373 DRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPL 432
Query: 432 KTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
E +I +Q++D NDN PTF +SY++++ ENN I V+A D DS NAQ+TYSL
Sbjct: 433 SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLA 492
Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLV 551
P++S VSIN+D G L+AL+S DYE LRE + RV+A D G P LSS + + V
Sbjct: 493 EDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFV 552
Query: 552 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
LD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+
Sbjct: 553 LDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKAS 612
Query: 611 EPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPF 670
EPGLF V + GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D +
Sbjct: 613 EPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 671 LPLPEAAPGQTQAN-SLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGR 724
L P N LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A+ G
Sbjct: 673 ADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
Query: 725 CSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
++P F G + G Q+Y +EV LT S S F +P
Sbjct: 733 ANVPTSHFVG----MDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 656 bits (1693), Expect = 0.0
Identities = 360/765 (47%), Positives = 496/765 (64%), Gaps = 16/765 (2%)
Query: 17 FFVLLSLSGAGAELGS----YSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGNK 72
FF+L L G E + YSV EET++GSFV ++ KDLGL E++ R RIIS+G
Sbjct: 13 FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRT 72
Query: 73 QHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSPM 132
Q L ++G L+ ++DREE+C + C+++F +LME+ + ++ ++ +IDIND+ P
Sbjct: 73 QLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPR 132
Query: 133 FTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKYP 192
F +E+ +KI EN+ G FPL+ A D DVG+N++Q+Y++SP+ HF + + D KYP
Sbjct: 133 FLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYP 192
Query: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
ELVL++ LDREEE L LTA DGG PPRS TA +++ VVD+ND+ P F P Y+V +P
Sbjct: 193 ELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVP 252
Query: 253 ENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEMV 312
EN P+G+ + TV A DLD G NG+++Y+ + + + K +N +TGE+ + +D+E
Sbjct: 253 ENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEET 312
Query: 313 TSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVS 371
YE+ ++A DG G K +L+ V+DVNDN P+VTM++L+S IPE++P V+A+F +
Sbjct: 313 AFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQ 372
Query: 372 DPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPRL 431
D DSG NG+ +I E+LPF L+ S+ N+Y LVT + LDRE + YNITL TD GTP L
Sbjct: 373 DRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPL 432
Query: 432 KTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
E +I +Q++D NDN PTF +SY++++ ENN I V+A D DS NAQ+TYSL
Sbjct: 433 SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLA 492
Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLV 551
P++S VSIN+D G L+AL+S DYE LRE + RV+A D G P LSS + + V
Sbjct: 493 EDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFV 552
Query: 552 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
LD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+
Sbjct: 553 LDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKAS 612
Query: 611 EPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPF 670
EPGLF V + GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D +
Sbjct: 613 EPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 671 LPLPEAAPGQTQAN-SLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGR 724
L P N LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A+ G
Sbjct: 673 ADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
Query: 725 CSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
++P F G + G Q+Y +EV LT S S F +P
Sbjct: 733 ANVPTSHFVG----MDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 652 bits (1683), Expect = 0.0
Identities = 363/771 (47%), Positives = 493/771 (63%), Gaps = 12/771 (1%)
Query: 7 HNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARI 66
H +R QVL+ +L +L GA A YS+ EE E+GSFV N+ KDLGL E++ RI
Sbjct: 7 HPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRI 66
Query: 67 ISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDI 126
+S+G Q L + G L+ ++DREELC + C++ F +L+E+ L ++ E+ ++DI
Sbjct: 67 VSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDI 126
Query: 127 NDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFR 186
ND++P F ++E+ +KI EN+ + FPL D DVG N++Q +K+S +SHF V +
Sbjct: 127 NDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEA 186
Query: 187 DGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPI 246
G KYPELVL+ LDRE E RL LTA+DGG P RS AQ+ + V+D+NDN P F QP+
Sbjct: 187 HGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPV 246
Query: 247 YKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQ 306
Y+V +PEN P+G+ V V+A D D G +G+++Y+ + +E IS+ +N +TGE+
Sbjct: 247 YRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSAN 306
Query: 307 VDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPE-IVV 365
+D+E + YE+ ++A DG GL + +L+ ++DVNDN P+V +++ + I E++P V+
Sbjct: 307 LDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVI 366
Query: 366 AVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTD 425
A+F V D DSG NG SI LPF L+ SV N+Y LVT ALDRE YNIT+T TD
Sbjct: 367 ALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATD 426
Query: 426 MGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 485
GTP L TE I++ ++D NDN PTF +SY+++V ENN I SV+A D D NAQ
Sbjct: 427 KGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQ 486
Query: 486 VTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEA 545
V+YSL PL+S VSIN+D G L+ALRS DYE LR+ + V+A+D G P LSS
Sbjct: 487 VSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNV 546
Query: 546 LVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 604
+ + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 547 SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY 606
Query: 605 QLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVD 664
+LLKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D
Sbjct: 607 RLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 666
Query: 665 GFSQPFLPLPEAAPGQTQANS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR--- 718
L P +S LT+YLVVA+A+VS +FL V++ +A+RL R +SR
Sbjct: 667 RIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQ 726
Query: 719 AASVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
A+ G SMP F G V G Q+Y +EV LT S S F +P
Sbjct: 727 ASGGGLASMPGSHFVG----VEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 652 bits (1683), Expect = 0.0
Identities = 363/771 (47%), Positives = 493/771 (63%), Gaps = 12/771 (1%)
Query: 7 HNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARI 66
H +R QVL+ +L +L GA A YS+ EE E+GSFV N+ KDLGL E++ RI
Sbjct: 7 HPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRI 66
Query: 67 ISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDI 126
+S+G Q L + G L+ ++DREELC + C++ F +L+E+ L ++ E+ ++DI
Sbjct: 67 VSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDI 126
Query: 127 NDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFR 186
ND++P F ++E+ +KI EN+ + FPL D DVG N++Q +K+S +SHF V +
Sbjct: 127 NDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEA 186
Query: 187 DGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPI 246
G KYPELVL+ LDRE E RL LTA+DGG P RS AQ+ + V+D+NDN P F QP+
Sbjct: 187 HGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPV 246
Query: 247 YKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQ 306
Y+V +PEN P+G+ V V+A D D G +G+++Y+ + +E IS+ +N +TGE+
Sbjct: 247 YRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSAN 306
Query: 307 VDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPE-IVV 365
+D+E + YE+ ++A DG GL + +L+ ++DVNDN P+V +++ + I E++P V+
Sbjct: 307 LDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVI 366
Query: 366 AVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTD 425
A+F V D DSG NG SI LPF L+ SV N+Y LVT ALDRE YNIT+T TD
Sbjct: 367 ALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATD 426
Query: 426 MGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 485
GTP L TE I++ ++D NDN PTF +SY+++V ENN I SV+A D D NAQ
Sbjct: 427 KGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQ 486
Query: 486 VTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEA 545
V+YSL PL+S VSIN+D G L+ALRS DYE LR+ + V+A+D G P LSS
Sbjct: 487 VSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNV 546
Query: 546 LVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 604
+ + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 547 SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY 606
Query: 605 QLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVD 664
+LLKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D
Sbjct: 607 RLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 666
Query: 665 GFSQPFLPLPEAAPGQTQANS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR--- 718
L P +S LT+YLVVA+A+VS +FL V++ +A+RL R +SR
Sbjct: 667 RIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQ 726
Query: 719 AASVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
A+ G SMP F G V G Q+Y +EV LT S S F +P
Sbjct: 727 ASGGGLASMPGSHFVG----VEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 649 bits (1675), Expect = 0.0
Identities = 354/751 (47%), Positives = 482/751 (64%), Gaps = 10/751 (1%)
Query: 26 AGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGNKQHLQLKAQTGDLL 85
AGA SYS+ EE E+GSFV N+ KDLGL E++ R RI+S+G Q L ++G L+
Sbjct: 30 AGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLI 89
Query: 86 INEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSPMFTEKEMILKIPEN 145
++DREELC + C++ F +L+E+ +++F E+ V DIND++P F + + +KI EN
Sbjct: 90 TAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINEN 149
Query: 146 SPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKYPELVLDKELDREEE 205
G FPL A+D DVG N++Q+Y++SP+ HF + + +G KYPELVL+ LDREEE
Sbjct: 150 VAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEE 209
Query: 206 PQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIPENSPLGSLVATVS 265
L LTA DGG P RSGT V + V D NDNAP F P Y+V +PEN P+G+ + TV+
Sbjct: 210 AIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVT 269
Query: 266 ARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATDGG 325
A D D GANG+++Y+ + + ++N TGE+++ + +D+E YE+ I+A DGG
Sbjct: 270 ATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGG 329
Query: 326 GLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNNGKTISS 384
+L+ V DVNDN P++T+++L SP+ E+SP VVA+ +V D DS NG+ S
Sbjct: 330 AYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCS 389
Query: 385 IQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDV 444
I LPF L+ S+ ++Y LV RALDRE + YNIT+T TD G+P L TE + +Q++D+
Sbjct: 390 ILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADI 449
Query: 445 NDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLV 504
NDN PTF+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL +PL+S +
Sbjct: 450 NDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYI 509
Query: 505 SINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLVLDANDNSPFVLYP 564
SIN+D G L+ALRS DYE E + +V+A+D G P LSS + + VLD NDN+P +LYP
Sbjct: 510 SINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYP 569
Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V H GE
Sbjct: 570 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGE 629
Query: 624 VRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPFLPLPE-AAPGQTQ 682
VRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D Q L +P ++
Sbjct: 630 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSE 689
Query: 683 ANSLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRCSMPEGPFPGRLVD 738
+ LT+YLVVA+A+VS +FL V++ +A RL R R AS G + G V
Sbjct: 690 TSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHFVG 746
Query: 739 VSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
V G Q+Y +EV LT S S F +P
Sbjct: 747 VDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 649 bits (1675), Expect = 0.0
Identities = 354/751 (47%), Positives = 482/751 (64%), Gaps = 10/751 (1%)
Query: 26 AGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGNKQHLQLKAQTGDLL 85
AGA SYS+ EE E+GSFV N+ KDLGL E++ R RI+S+G Q L ++G L+
Sbjct: 30 AGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLI 89
Query: 86 INEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSPMFTEKEMILKIPEN 145
++DREELC + C++ F +L+E+ +++F E+ V DIND++P F + + +KI EN
Sbjct: 90 TAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINEN 149
Query: 146 SPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKYPELVLDKELDREEE 205
G FPL A+D DVG N++Q+Y++SP+ HF + + +G KYPELVL+ LDREEE
Sbjct: 150 VAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEE 209
Query: 206 PQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIPENSPLGSLVATVS 265
L LTA DGG P RSGT V + V D NDNAP F P Y+V +PEN P+G+ + TV+
Sbjct: 210 AIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVT 269
Query: 266 ARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATDGG 325
A D D GANG+++Y+ + + ++N TGE+++ + +D+E YE+ I+A DGG
Sbjct: 270 ATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGG 329
Query: 326 GLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNNGKTISS 384
+L+ V DVNDN P++T+++L SP+ E+SP VVA+ +V D DS NG+ S
Sbjct: 330 AYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCS 389
Query: 385 IQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDV 444
I LPF L+ S+ ++Y LV RALDRE + YNIT+T TD G+P L TE + +Q++D+
Sbjct: 390 ILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADI 449
Query: 445 NDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLV 504
NDN PTF+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL +PL+S +
Sbjct: 450 NDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYI 509
Query: 505 SINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLVLDANDNSPFVLYP 564
SIN+D G L+ALRS DYE E + +V+A+D G P LSS + + VLD NDN+P +LYP
Sbjct: 510 SINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYP 569
Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V H GE
Sbjct: 570 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGE 629
Query: 624 VRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPFLPLPE-AAPGQTQ 682
VRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D Q L +P ++
Sbjct: 630 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSE 689
Query: 683 ANSLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRCSMPEGPFPGRLVD 738
+ LT+YLVVA+A+VS +FL V++ +A RL R R AS G + G V
Sbjct: 690 TSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHFVG 746
Query: 739 VSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
V G Q+Y +EV LT S S F +P
Sbjct: 747 VDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 643 bits (1658), Expect = 0.0
Identities = 354/766 (46%), Positives = 487/766 (63%), Gaps = 12/766 (1%)
Query: 12 RQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGN 71
R +L+ L L AGA YSV EET++GSFV N+ KDLGL E++ RI+S+G
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 KQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSP 131
L ++G L+ ++DREELC + PC++ F +L+E+ +++F E+ +IDIND++P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 MFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKY 191
F +E+ K+ E + GT L DLDVG N++Q+Y++S + HF + + + DG ++
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQI 251
PE+VL LDREEE L LTA DGG P RSGT ++ I+VVD NDN P F Q Y + +
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 PENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEM 311
PEN PLG+ + V+A D D GANG+++Y+ +++ ++ TGE+ ++ +DFE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 VTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPEN-SPEIVVAVFSV 370
Y + ++A DG GL K +L++V+DVNDN P+VT++++T+ +PEN P ++A+ SV
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 371 SDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPR 430
D DSG+NG T I +LPF L+ V N+Y LVTER LDRE + YNIT+T D GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 431 LKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
L TE +I++ ++D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+TYSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 491 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVL 550
+ PL++ +SIN+D G L+ALRS DYE R+ + +V A D G P LSS + +
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
+LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D S
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 670 FLPLPEAAPGQTQANS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVG 723
L P +S LT+YLVVA A+VS +FL V++ +A RL R +SR A+ G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
Query: 724 RCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
SMP F G V G Q+Y +EV LT S S F +P
Sbjct: 732 LASMPGSHFVG----VDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 643 bits (1658), Expect = 0.0
Identities = 354/766 (46%), Positives = 487/766 (63%), Gaps = 12/766 (1%)
Query: 12 RQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGN 71
R +L+ L L AGA YSV EET++GSFV N+ KDLGL E++ RI+S+G
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 KQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSP 131
L ++G L+ ++DREELC + PC++ F +L+E+ +++F E+ +IDIND++P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 MFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKY 191
F +E+ K+ E + GT L DLDVG N++Q+Y++S + HF + + + DG ++
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQI 251
PE+VL LDREEE L LTA DGG P RSGT ++ I+VVD NDN P F Q Y + +
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 PENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEM 311
PEN PLG+ + V+A D D GANG+++Y+ +++ ++ TGE+ ++ +DFE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 VTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPEN-SPEIVVAVFSV 370
Y + ++A DG GL K +L++V+DVNDN P+VT++++T+ +PEN P ++A+ SV
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 371 SDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPR 430
D DSG+NG T I +LPF L+ V N+Y LVTER LDRE + YNIT+T D GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 431 LKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
L TE +I++ ++D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+TYSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 491 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVL 550
+ PL++ +SIN+D G L+ALRS DYE R+ + +V A D G P LSS + +
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
+LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D S
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 670 FLPLPEAAPGQTQANS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVG 723
L P +S LT+YLVVA A+VS +FL V++ +A RL R +SR A+ G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
Query: 724 RCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
SMP F G V G Q+Y +EV LT S S F +P
Sbjct: 732 LASMPGSHFVG----VDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 642 bits (1657), Expect = 0.0
Identities = 355/768 (46%), Positives = 492/768 (64%), Gaps = 12/768 (1%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
R R VL+ +L L A A YSV EETE+G V N+ KDL L E++ R+ RI+S+
Sbjct: 10 RGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSR 69
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
G Q L ++G L+ ++DREELC + C+++F+VL+E+ ++++ E+ V DIND
Sbjct: 70 GRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDS 129
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
+P F + + +KI E + G +PL A+D DVG N++Q+Y++SP+ HF + + +G
Sbjct: 130 APKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGA 189
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
PELVL++ LDREE L LTA DGG P RS T ++ + V+D NDNAP F Q IY+V
Sbjct: 190 INPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRV 249
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
++ EN P G+ + T +A DLD G NGK++Y ++ +E S ++N TGE+ K +D+
Sbjct: 250 KVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDY 309
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPE-IVVAVF 368
E + YE+ I+A DGGGL G +L+ V DVNDN P+VT+++L SP+ E++P+ V+ +F
Sbjct: 310 EECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLF 369
Query: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428
+ D DSG NG+ + SIQE+L F L+ S +++Y L+T + LDRE +EYNIT+T TD GT
Sbjct: 370 NAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGT 429
Query: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
P L TE +IT+Q++D+NDN P F+Q SY++++ ENN+ I SV A D DS N++V Y
Sbjct: 430 PPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIY 489
Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548
SL PL++ VSIN+D G L+AL S DYE R+ + +V+A+D GSP LSS +R
Sbjct: 490 SLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLR 549
Query: 549 VLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 550 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLF 609
Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
KA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIP 669
Query: 668 QPFLPLPE-AAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRRSRAAS 721
L P +A+ LT+YLVVA+A VS +FL V+ +A+RL RA S
Sbjct: 670 DILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATS 729
Query: 722 VGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
G +P F G V G Q+Y E LT S S F +P
Sbjct: 730 DGLAGVPTSHFVG----VDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 642 bits (1657), Expect = 0.0
Identities = 355/768 (46%), Positives = 492/768 (64%), Gaps = 12/768 (1%)
Query: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
R R VL+ +L L A A YSV EETE+G V N+ KDL L E++ R+ RI+S+
Sbjct: 10 RGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSR 69
Query: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
G Q L ++G L+ ++DREELC + C+++F+VL+E+ ++++ E+ V DIND
Sbjct: 70 GRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDS 129
Query: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
+P F + + +KI E + G +PL A+D DVG N++Q+Y++SP+ HF + + +G
Sbjct: 130 APKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGA 189
Query: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
PELVL++ LDREE L LTA DGG P RS T ++ + V+D NDNAP F Q IY+V
Sbjct: 190 INPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRV 249
Query: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
++ EN P G+ + T +A DLD G NGK++Y ++ +E S ++N TGE+ K +D+
Sbjct: 250 KVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDY 309
Query: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPE-IVVAVF 368
E + YE+ I+A DGGGL G +L+ V DVNDN P+VT+++L SP+ E++P+ V+ +F
Sbjct: 310 EECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLF 369
Query: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428
+ D DSG NG+ + SIQE+L F L+ S +++Y L+T + LDRE +EYNIT+T TD GT
Sbjct: 370 NAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGT 429
Query: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
P L TE +IT+Q++D+NDN P F+Q SY++++ ENN+ I SV A D DS N++V Y
Sbjct: 430 PPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIY 489
Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548
SL PL++ VSIN+D G L+AL S DYE R+ + +V+A+D GSP LSS +R
Sbjct: 490 SLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLR 549
Query: 549 VLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 550 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLF 609
Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
KA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL V + D
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIP 669
Query: 668 QPFLPLPE-AAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRRSRAAS 721
L P +A+ LT+YLVVA+A VS +FL V+ +A+RL RA S
Sbjct: 670 DILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATS 729
Query: 722 VGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
G +P F G V G Q+Y E LT S S F +P
Sbjct: 730 DGLAGVPTSHFVG----VDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 641 bits (1653), Expect = 0.0
Identities = 353/764 (46%), Positives = 484/764 (63%), Gaps = 6/764 (0%)
Query: 11 QRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQG 70
++ VL+ F+L +L A A YSV EE +RGSFV N+ KDLGL ++ + RI+S+G
Sbjct: 11 RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70
Query: 71 NKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHS 130
Q L ++G L+ ++DREELC + PC+L+F +L+E+ L I+ E+ + DIND++
Sbjct: 71 RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130
Query: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRK 190
P F +E+ LKI E + G PL +A D DVG N +Q Y ++P+ HF + + DG K
Sbjct: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190
Query: 191 YPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQ 250
YPELVL++ LDREEE L L A DGG P SGT+++ ++V+D NDNAP F QP Y++
Sbjct: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250
Query: 251 IPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFE 310
IPEN+ +G+ + TV+A D D G ++ Y L + + S+ E+ +GE+ + K +D+E
Sbjct: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310
Query: 311 MVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS-PEIVVAVFS 369
T +E+ I+A DG GL + +++ V+DVNDN P+ M++ TS + E+S P ++ +F+
Sbjct: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370
Query: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
V D DSG N T S+ EDLPF L+ SV N+Y LVT RALDRE + YNITLT D G P
Sbjct: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430
Query: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
L T+ +I +Q++D+NDNAP F++TSY+ ++ ENN + SV+A D DS NA VTYS
Sbjct: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490
Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
PL+S +SIN+D G L+ALRS DYE LR+ + V A D G+P LSS + +
Sbjct: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550
Query: 550 LVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
VLD NDN+P +LYP + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
A+EPGLF V H GEVRTAR L +RDA KQ LVV ++D+G+PP SAT TL V + D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670
Query: 669 PFLPLPEAAPGQTQANS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRC 725
L P +S LT+YLVVA+A+VS +FL V++ +A RL R +SR
Sbjct: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 726 SMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
S+ G V V G Q+Y +EV LT S S F +P
Sbjct: 731 SL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 641 bits (1653), Expect = 0.0
Identities = 353/764 (46%), Positives = 484/764 (63%), Gaps = 6/764 (0%)
Query: 11 QRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQG 70
++ VL+ F+L +L A A YSV EE +RGSFV N+ KDLGL ++ + RI+S+G
Sbjct: 11 RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70
Query: 71 NKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHS 130
Q L ++G L+ ++DREELC + PC+L+F +L+E+ L I+ E+ + DIND++
Sbjct: 71 RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130
Query: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRK 190
P F +E+ LKI E + G PL +A D DVG N +Q Y ++P+ HF + + DG K
Sbjct: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190
Query: 191 YPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQ 250
YPELVL++ LDREEE L L A DGG P SGT+++ ++V+D NDNAP F QP Y++
Sbjct: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250
Query: 251 IPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFE 310
IPEN+ +G+ + TV+A D D G ++ Y L + + S+ E+ +GE+ + K +D+E
Sbjct: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310
Query: 311 MVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS-PEIVVAVFS 369
T +E+ I+A DG GL + +++ V+DVNDN P+ M++ TS + E+S P ++ +F+
Sbjct: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370
Query: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
V D DSG N T S+ EDLPF L+ SV N+Y LVT RALDRE + YNITLT D G P
Sbjct: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430
Query: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
L T+ +I +Q++D+NDNAP F++TSY+ ++ ENN + SV+A D DS NA VTYS
Sbjct: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490
Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
PL+S +SIN+D G L+ALRS DYE LR+ + V A D G+P LSS + +
Sbjct: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550
Query: 550 LVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
VLD NDN+P +LYP + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
A+EPGLF V H GEVRTAR L +RDA KQ LVV ++D+G+PP SAT TL V + D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670
Query: 669 PFLPLPEAAPGQTQANS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRC 725
L P +S LT+YLVVA+A+VS +FL V++ +A RL R +SR
Sbjct: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 726 SMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
S+ G V V G Q+Y +EV LT S S F +P
Sbjct: 731 SL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 637 bits (1642), Expect = 0.0
Identities = 353/760 (46%), Positives = 486/760 (63%), Gaps = 4/760 (0%)
Query: 14 VLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGNKQ 73
+L F +L +L G+ YS+ EE ++GSFV N+ KDLGL E++ R RI+S+G Q
Sbjct: 14 LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQ 73
Query: 74 HLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSPMF 133
L ++G L+ ++DREELC + C+++F +L+EN ++I+ E+ +IDIND+ P F
Sbjct: 74 LFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRF 133
Query: 134 TEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKYPE 193
++E+ +K+ EN+ GT L A D DVG N++++Y++S + HF + + DG+KYPE
Sbjct: 134 RDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPE 193
Query: 194 LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIPE 253
LVL++ LDRE+E L LTALDGG P SGT +R+ V+D NDNAP F Y V +PE
Sbjct: 194 LVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPE 253
Query: 254 NSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEMVT 313
N P+G+ + ++A D D G NGK++Y+ E IS+T +++ GE+ + +D+E
Sbjct: 254 NIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESR 313
Query: 314 SYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS-PEIVVAVFSVSD 372
Y + + A DGG L +++ V DVNDN P+V +++LTS I E+ P V+A+FSV D
Sbjct: 314 FYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHD 373
Query: 373 PDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPRLK 432
DSG NG+ SI +LPF L+ SV N+Y L+T R LDRE ++YNITLTV D GTP L
Sbjct: 374 GDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLS 433
Query: 433 TEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLP 492
TE +I ++++DVNDN P F Q SY+ V ENN + I SV+A D DSG NA+VTYSL
Sbjct: 434 TESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAE 493
Query: 493 PQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLVL 552
PL+S VSIN+D G L+ALRS DYE LR+ + V+A+D G+P LSS + + VL
Sbjct: 494 DTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVL 553
Query: 553 DANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
D NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E
Sbjct: 554 DQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASE 613
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPFL 671
PGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT T+ V + D
Sbjct: 614 PGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILA 673
Query: 672 PLPE-AAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASV-GRCSMPE 729
L P + LT+YLVVA+A+VS +FL V++ + +RL R ++ + S
Sbjct: 674 DLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLA 733
Query: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
G V V G Q+Y +EV LT S S F +P
Sbjct: 734 GVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 637 bits (1642), Expect = 0.0
Identities = 353/760 (46%), Positives = 486/760 (63%), Gaps = 4/760 (0%)
Query: 14 VLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGNKQ 73
+L F +L +L G+ YS+ EE ++GSFV N+ KDLGL E++ R RI+S+G Q
Sbjct: 14 LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQ 73
Query: 74 HLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHSPMF 133
L ++G L+ ++DREELC + C+++F +L+EN ++I+ E+ +IDIND+ P F
Sbjct: 74 LFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRF 133
Query: 134 TEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKYPE 193
++E+ +K+ EN+ GT L A D DVG N++++Y++S + HF + + DG+KYPE
Sbjct: 134 RDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPE 193
Query: 194 LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIPE 253
LVL++ LDRE+E L LTALDGG P SGT +R+ V+D NDNAP F Y V +PE
Sbjct: 194 LVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPE 253
Query: 254 NSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFEMVT 313
N P+G+ + ++A D D G NGK++Y+ E IS+T +++ GE+ + +D+E
Sbjct: 254 NIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESR 313
Query: 314 SYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS-PEIVVAVFSVSD 372
Y + + A DGG L +++ V DVNDN P+V +++LTS I E+ P V+A+FSV D
Sbjct: 314 FYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHD 373
Query: 373 PDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPRLK 432
DSG NG+ SI +LPF L+ SV N+Y L+T R LDRE ++YNITLTV D GTP L
Sbjct: 374 GDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLS 433
Query: 433 TEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLP 492
TE +I ++++DVNDN P F Q SY+ V ENN + I SV+A D DSG NA+VTYSL
Sbjct: 434 TESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAE 493
Query: 493 PQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLVL 552
PL+S VSIN+D G L+ALRS DYE LR+ + V+A+D G+P LSS + + VL
Sbjct: 494 DTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVL 553
Query: 553 DANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
D NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E
Sbjct: 554 DQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASE 613
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPFL 671
PGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT T+ V + D
Sbjct: 614 PGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILA 673
Query: 672 PLPE-AAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASV-GRCSMPE 729
L P + LT+YLVVA+A+VS +FL V++ + +RL R ++ + S
Sbjct: 674 DLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLA 733
Query: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKP 769
G V V G Q+Y +EV LT S S F +P
Sbjct: 734 GVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,953,142
Number of Sequences: 37866
Number of extensions: 1401953
Number of successful extensions: 10572
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3288
Number of HSP's gapped (non-prelim): 648
length of query: 776
length of database: 18,247,518
effective HSP length: 110
effective length of query: 666
effective length of database: 14,082,258
effective search space: 9378783828
effective search space used: 9378783828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.