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Search of human proteins with 9955941
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9955941 acrosomal vesicle protein 1 isoform h precursor
[Homo sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo... 318 1e-87
gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo... 298 1e-81
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo... 288 1e-78
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo... 271 2e-73
gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo... 234 2e-62
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 231 2e-61
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 203 4e-53
gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo... 148 2e-36
gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo... 95 3e-20
gi|38261962 activating transcription factor 7 interacting protei... 51 5e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 47 5e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 47 5e-06
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 42 2e-04
gi|239744892 PREDICTED: hypothetical protein XP_002344252 [Homo ... 42 3e-04
gi|49087132 sal-like 2 [Homo sapiens] 41 4e-04
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 41 5e-04
gi|149999615 variable charge, X-linked 3B [Homo sapiens] 40 8e-04
gi|139394599 hypermethylated in cancer 2 [Homo sapiens] 39 0.001
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 39 0.002
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 39 0.002
gi|66932943 variable charge, X chromosome [Homo sapiens] 39 0.002
gi|31657109 zinc finger protein 282 [Homo sapiens] 38 0.003
gi|4758216 dishevelled 2 [Homo sapiens] 37 0.007
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 37 0.009
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 37 0.009
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 37 0.009
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 37 0.009
gi|48762947 variable charge, X-linked 3A [Homo sapiens] 36 0.015
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 36 0.015
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 36 0.015
>gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo
sapiens]
Length = 155
Score = 318 bits (815), Expect = 1e-87
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQF 120
SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQF
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQF 120
Query: 121 MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 155
MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 121 MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 155
>gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo
sapiens]
Length = 195
Score = 298 bits (764), Expect = 1e-81
Identities = 155/195 (79%), Positives = 155/195 (79%), Gaps = 40/195 (20%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG----- 115
SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 120
Query: 116 -----------------------------------GKLQFMVQGCENMCPSMNLFSHGTR 140
GKLQFMVQGCENMCPSMNLFSHGTR
Sbjct: 121 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 180
Query: 141 MQIICCRNQSFCNKI 155
MQIICCRNQSFCNKI
Sbjct: 181 MQIICCRNQSFCNKI 195
>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
sapiens]
Length = 210
Score = 288 bits (738), Expect = 1e-78
Identities = 155/210 (73%), Positives = 155/210 (73%), Gaps = 55/210 (26%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE---------------QPS 45
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE QPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
Query: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS
Sbjct: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
Query: 106 GAPISSTSTG----------------------------------------GKLQFMVQGC 125
GAPISSTSTG GKLQFMVQGC
Sbjct: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
Query: 126 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 155
ENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
sapiens]
Length = 176
Score = 271 bits (692), Expect = 2e-73
Identities = 140/176 (79%), Positives = 143/176 (81%), Gaps = 21/176 (11%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG------------EHASGEQASGAP 108
SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG + + G
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGTILNCYTCAYMNDQGKCLRGEGTC 120
Query: 109 ISSTS---------TGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 155
I+ S GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 121 ITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 176
>gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo
sapiens]
Length = 170
Score = 234 bits (598), Expect = 2e-62
Identities = 130/195 (66%), Positives = 130/195 (66%), Gaps = 65/195 (33%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPS--------------- 45
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG----- 115
DEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG
Sbjct: 46 ----------DEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 95
Query: 116 -----------------------------------GKLQFMVQGCENMCPSMNLFSHGTR 140
GKLQFMVQGCENMCPSMNLFSHGTR
Sbjct: 96 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 155
Query: 141 MQIICCRNQSFCNKI 155
MQIICCRNQSFCNKI
Sbjct: 156 MQIICCRNQSFCNKI 170
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 231 bits (589), Expect = 2e-61
Identities = 143/265 (53%), Positives = 146/265 (55%), Gaps = 110/265 (41%)
Query: 1 MNRFLLLMSLYLLGSARG---------------------------------------TSS 21
MNRFLLLMSLYLLGSARG TSS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEFFSLENPSDAEALYETSS 60
Query: 22 QPNELS--GSIDHQTSVQQLP-----------------------------GEQPSGEQPS 50
N LS GS +H +S + GEQPSGEQPS
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 51 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS 110
GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS
Sbjct: 121 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS 180
Query: 111 STSTG----------------------------------------GKLQFMVQGCENMCP 130
STSTG GKLQFMVQGCENMCP
Sbjct: 181 STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP 240
Query: 131 SMNLFSHGTRMQIICCRNQSFCNKI 155
SMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 241 SMNLFSHGTRMQIICCRNQSFCNKI 265
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 203 bits (517), Expect = 4e-53
Identities = 128/246 (52%), Positives = 134/246 (54%), Gaps = 91/246 (36%)
Query: 1 MNRFLLLMSLYLLGSARG---------------------------------------TSS 21
MNRFLLLMSLYLLGSARG TSS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEFFSLENPSDAEALYETSS 60
Query: 22 QPNELS--GSIDHQTSVQQLP-----------------------------GEQPSGEQPS 50
N LS GS +H +S + GEQPSGEQPS
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 51 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG------------EH 98
GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG +
Sbjct: 121 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGTILNCYTCAYMNDQ 180
Query: 99 ASGEQASGAPISSTS---------TGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQ 149
+ G I+ S GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQ
Sbjct: 181 GKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQ 240
Query: 150 SFCNKI 155
SFCNKI
Sbjct: 241 SFCNKI 246
>gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo
sapiens]
Length = 121
Score = 148 bits (374), Expect = 2e-36
Identities = 88/155 (56%), Positives = 95/155 (61%), Gaps = 34/155 (21%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG +
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGT-----------------I 43
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQF 120
+ +D+ G+ GE Q S + + GGKLQF
Sbjct: 44 LNCYTCAYMNDQ--------GKCLRGEGTCITQNSQQ---------CMLKKIFEGGKLQF 86
Query: 121 MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 155
MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 87 MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
>gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo
sapiens]
Length = 81
Score = 94.7 bits (234), Expect = 3e-20
Identities = 46/64 (71%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
Query: 96 GEHASGEQASGAPISSTST----GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSF 151
G + + SG+ TS GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSF
Sbjct: 18 GTSSQPNELSGSIDHQTSVQQLPGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSF 77
Query: 152 CNKI 155
CNKI
Sbjct: 78 CNKI 81
Score = 83.2 bits (204), Expect = 8e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|38261962 activating transcription factor 7 interacting protein
[Homo sapiens]
Length = 1270
Score = 50.8 bits (120), Expect = 5e-07
Identities = 33/100 (33%), Positives = 46/100 (46%)
Query: 12 LLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD 71
+L S TS P S S G+ PSG+ G+ SG+ +L SG+ S
Sbjct: 148 VLASGDSTSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTSS 207
Query: 72 EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
+ GE E SG+ A+ + S E S + ASGAP S+
Sbjct: 208 DPIPGEPVPVEPISGDCAADDIASSEITSVDLASGAPAST 247
Score = 50.1 bits (118), Expect = 8e-07
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 40 PGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHA 99
PG+ +G+ SG SG+ + S E S + SG+ SG+ PSG+ + G+ SG+
Sbjct: 136 PGDLDAGDPASGVLASGDSTSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDAT 195
Query: 100 SGEQASGAPISSTSTGGK 117
+ + +SG P SS G+
Sbjct: 196 ADDLSSGDPTSSDPIPGE 213
Score = 48.9 bits (115), Expect = 2e-06
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 36 VQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPS 95
V +LP E SG+ G+ +G+ L SG+ S + S E S + SG+ SG+ PS
Sbjct: 122 VSKLPAEPVSGDPAPGDLDAGDPASGVLASGDSTSGDPTSSEPSSSDAASGDATSGDAPS 181
Query: 96 GEHASGEQASGAPISSTSTGG 116
G+ + G+ SG + + G
Sbjct: 182 GDVSPGDATSGDATADDLSSG 202
Score = 44.3 bits (103), Expect = 4e-05
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHAS 100
G SG+ SG+ S E S+ SG+ S + PSG+ G+ SG+ + + SG+ S
Sbjct: 147 GVLASGDSTSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTS 206
Query: 101 GEQASGAPI 109
+ G P+
Sbjct: 207 SDPIPGEPV 215
Score = 36.2 bits (82), Expect = 0.012
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
G A + ++LS TS +PGE E SG+ + + SE+ S + S
Sbjct: 187 GDATSGDATADDLSSG--DPTSSDPIPGEPVPVEPISGDCAADDIASSEITSVDLASGAP 244
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTST 114
S + S + SG+ +S E S + A+GE AS ++S ST
Sbjct: 245 ASTDPASDDLASGDLSSSELASDDLATGELASD-ELTSEST 284
Score = 35.8 bits (81), Expect = 0.015
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 34 TSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQ 93
TS E S + SG+ SG+ P ++ G+ S + + + SG+ S + GE
Sbjct: 155 TSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTSSDPIPGEP 214
Query: 94 PSGEHASGEQASGAPISSTST 114
E SG+ A+ SS T
Sbjct: 215 VPVEPISGDCAADDIASSEIT 235
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 47.4 bits (111), Expect = 5e-06
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 18 GTSSQPNELSGSID---HQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQP 74
G + P++L G Q + P +QP +P + +P + +PS +QP
Sbjct: 465 GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 75 SGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQ 119
+QP + S +QPS S +Q S P+S T +G LQ
Sbjct: 525 GSTKPPSQQPGSAKPSAQQPSPAKPSAQQ-STKPVSQTGSGKPLQ 568
Score = 35.8 bits (81), Expect = 0.015
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GSA+ S QP + QQ +PS +QP +QP S S +QPS +
Sbjct: 495 GSAKPPSQQPGST------KPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK 548
Query: 74 PSGEH--------GSGE--QPSGEQASGEQPSGE 97
PS + GSG+ QP S +QP +
Sbjct: 549 PSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 34.7 bits (78), Expect = 0.034
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGS 80
+QP+ L+ + Q + P + P +P + L +P ++ E+PS EQP + +
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK--A 390
Query: 81 GEQPSGEQASGEQPSGEHASGEQASGAP 108
QP G + Q G Q G P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Score = 31.2 bits (69), Expect = 0.37
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GS + +S QP + + V + P +QP +P + + +PL+ +QP +
Sbjct: 377 GSEKPSSEQPGPKA--LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLA-----QQPGLQS 429
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
P+ G + P + G+ P+ + G+ ++
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Score = 31.2 bits (69), Expect = 0.37
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 33 QTSVQQ-----LPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE 87
+T VQQ +P +Q + S + +P S+L +P +QP +QP
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Query: 88 QASGEQPSGEHASGEQASGAPISSTSTG 115
+ +QP +Q A S G
Sbjct: 498 KPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Score = 26.9 bits (58), Expect = 7.0
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 33 QTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE 92
+TS QQ +P + P +QP +P +QP +QP + +
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQP-----GPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 93 QPSGEHASGEQASGAPISSTSTG 115
QP S +Q S G
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPG 535
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 47.4 bits (111), Expect = 5e-06
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 18 GTSSQPNELSGSID---HQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQP 74
G + P++L G Q + P +QP +P + +P + +PS +QP
Sbjct: 465 GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 75 SGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQ 119
+QP + S +QPS S +Q S P+S T +G LQ
Sbjct: 525 GSTKPPSQQPGSAKPSAQQPSPAKPSAQQ-STKPVSQTGSGKPLQ 568
Score = 35.8 bits (81), Expect = 0.015
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GSA+ S QP + QQ +PS +QP +QP S S +QPS +
Sbjct: 495 GSAKPPSQQPGST------KPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK 548
Query: 74 PSGEH--------GSGE--QPSGEQASGEQPSGE 97
PS + GSG+ QP S +QP +
Sbjct: 549 PSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 34.7 bits (78), Expect = 0.034
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGS 80
+QP+ L+ + Q + P + P +P + L +P ++ E+PS EQP + +
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK--A 390
Query: 81 GEQPSGEQASGEQPSGEHASGEQASGAP 108
QP G + Q G Q G P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Score = 31.2 bits (69), Expect = 0.37
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GS + +S QP + + V + P +QP +P + + +PL+ +QP +
Sbjct: 377 GSEKPSSEQPGPKA--LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLA-----QQPGLQS 429
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
P+ G + P + G+ P+ + G+ ++
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Score = 31.2 bits (69), Expect = 0.37
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 33 QTSVQQ-----LPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE 87
+T VQQ +P +Q + S + +P S+L +P +QP +QP
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Query: 88 QASGEQPSGEHASGEQASGAPISSTSTG 115
+ +QP +Q A S G
Sbjct: 498 KPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Score = 26.9 bits (58), Expect = 7.0
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 33 QTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE 92
+TS QQ +P + P +QP +P +QP +QP + +
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQP-----GPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 93 QPSGEHASGEQASGAPISSTSTG 115
QP S +Q S G
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPG 535
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 42.0 bits (97), Expect = 2e-04
Identities = 20/54 (37%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 40 PGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQ 93
P E+P+ E+P+ E + E+ L+E E+ E+P+ E+P+ E S E+P+ E+A+ +
Sbjct: 204 PAEEPAEEKPTEE--AAEEELAE-EAAEEPAKEEPAAEEESAEEPATEEAAAPE 254
Score = 29.3 bits (64), Expect = 1.4
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 64 ESGEQPSDEQPSGEHG-------SGEQPSGEQASGEQPSGEHASGEQAS 105
E E+P++E+P+ E + E+P+ E+ + E+ S E + E+A+
Sbjct: 203 EPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAA 251
>gi|239744892 PREDICTED: hypothetical protein XP_002344252 [Homo
sapiens]
Length = 557
Score = 41.6 bits (96), Expect = 3e-04
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 13 LGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQP---SGEHLSGEQPLSELESGEQP 69
LG R P+ LSG H + +L G++ GE P SG+ G+ P S L G++
Sbjct: 228 LGGDRTHGDAPSRLSGDRTHGDAPSRLGGDRTHGEAPSRLSGDRTHGDAP-SRL-GGDRT 285
Query: 70 SDEQPS---GEHGSGEQP---SGEQASGEQPS---GEHASGEQAS 105
+ PS G+ G+ P SG++ G+ PS G+ GE S
Sbjct: 286 HGDAPSRLGGDRTHGDAPSRLSGDRTHGDAPSRLGGDRTHGEAPS 330
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 41.2 bits (95), Expect = 4e-04
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
G+A+ S+ + +SG+ S Q +QPS E E LS E+ + E E +DE
Sbjct: 730 GAAQENGSEQSTVSGA----GSFPQQQSQQPSPE----EELSEEEEEEDEEEEEDVTDED 781
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGK 117
G G + GE+A + E ASG + +++ +T GK
Sbjct: 782 SLA--GRGSESGGEKAISVRGDSEEASGAEEEVGTVAAAATAGK 823
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 40.8 bits (94), Expect = 5e-04
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLP-----------GEQPSGEQPSGEHLSGEQPL-- 60
G RG + + E S + + Q +Q P G+ E P G+++ E P
Sbjct: 119 GEPRGEAQREPEDSAAPERQEEAEQRPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPAGD 178
Query: 61 ---SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGG 116
+E G+ E P+G+ E P G+ E P+G+ E G + + G
Sbjct: 179 SVEAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAG 237
Score = 35.4 bits (80), Expect = 0.020
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GSA G + + G + + E P+G+ E G+ +E +G+ E
Sbjct: 150 GSASGEAGDSVDAEGPLG-----DNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEG 204
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGG 116
P G++ E P+G+ E G+ E +G + + G
Sbjct: 205 PLGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVG 247
Score = 35.4 bits (80), Expect = 0.020
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 16 ARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPS 75
A G E G + G+ E P+G+ + E PL G+ E P+
Sbjct: 162 AEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPL-----GDNIQAEGPA 216
Query: 76 GEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGG 116
G+ E G+ E P+G+ E G + + G
Sbjct: 217 GDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPAG 257
Score = 33.5 bits (75), Expect = 0.075
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 5/106 (4%)
Query: 16 ARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL-----SELESGEQPS 70
A G + E G + + G+ E P G+++ E P +E G+
Sbjct: 172 AEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVD 231
Query: 71 DEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGG 116
E P+G+ E G+ P+G+ +G + + G
Sbjct: 232 AEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEAEGPAG 277
Score = 29.6 bits (65), Expect = 1.1
Identities = 16/79 (20%), Positives = 32/79 (40%)
Query: 39 LPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEH 98
+ E P+G+ E G+ +E +G+ E G+ P+G+ P+G+
Sbjct: 210 IQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDS 269
Query: 99 ASGEQASGAPISSTSTGGK 117
E +G + + G+
Sbjct: 270 VEAEGPAGDSMDAEGPAGR 288
Score = 29.3 bits (64), Expect = 1.4
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 44 PSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG-----EHGSGEQPSGEQASGEQPSGEH 98
P E+P +G + +E G + ++E P G E G G G +A G H
Sbjct: 23 PLAERPGEPGAAGGE--AEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGPEAEARGTRGAH 80
Query: 99 ASGEQASGAP 108
E GAP
Sbjct: 81 GETEAEEGAP 90
Score = 29.3 bits (64), Expect = 1.4
Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 6/102 (5%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSG----EQPSGEHLSGEQPLSELESGEQP 69
G + G S P EL+ + V + G + + +GE G+ P E E+
Sbjct: 316 GESAGRS--PGELAWDAAEEAEVPGVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEER 373
Query: 70 SDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
+ P G E++ P GE + G A +S+
Sbjct: 374 RERSPEGPREEEAAGGEEESPDSSPHGEASRGAAEPEAQLSN 415
Score = 27.7 bits (60), Expect = 4.1
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 6/66 (9%)
Query: 43 QPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGE 102
+P G P G Q E+ + +P G E P G + + E P G A E
Sbjct: 6 EPEGVAP------GPQGPPEVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKE 59
Query: 103 QASGAP 108
G P
Sbjct: 60 AGGGGP 65
Score = 26.9 bits (58), Expect = 7.0
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 42 EQPSGEQPSGEHLSGEQPLSEL-----ESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG 96
E P G + + E G + E + G + G HG E G E P G
Sbjct: 39 EGPEGSEGAEEAPRGAAAVKEAGGGGPDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQG 98
Query: 97 EHASGEQASGA 107
GE+ SGA
Sbjct: 99 ----GEETSGA 105
>gi|149999615 variable charge, X-linked 3B [Homo sapiens]
Length = 216
Score = 40.0 bits (92), Expect = 8e-04
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-- 71
G+ SQ +EL + ++ V++ ++ E+P + E+PLS+ E+P
Sbjct: 98 GTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
Query: 72 ---EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTS 113
E+P + E+P +++ E+P + + E+ P+S S
Sbjct: 158 SEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEE----PLSQES 198
Score = 36.6 bits (83), Expect = 0.009
Identities = 18/88 (20%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-----EQPS 75
SQ +++ + ++ V++ ++ E+P + E+PLS+ E+P E+P
Sbjct: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPL 184
Query: 76 GEHGSGEQPSGEQASGEQPSGEHASGEQ 103
+ E+P +++ E+P + + E+
Sbjct: 185 SQESQVEEPLSQESEMEEPLSQESEMEE 212
Score = 32.7 bits (73), Expect = 0.13
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 30/118 (25%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQPSGE--------------QPSGEHLSGEQPL 60
+A G S QP++ + +LP E+P E +P + E+PL
Sbjct: 72 AAPGPSDQPSQ-------ELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPL 124
Query: 61 SELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTS 113
S+ E+P E+P + E+P +++ E+P + + E+ P+S S
Sbjct: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE----PLSQES 178
>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
Length = 615
Score = 39.3 bits (90), Expect = 0.001
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 19/118 (16%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGEQPSGE------------------QPSGEHLSGEQP 59
GT +P +L G+ D+ S+ + PG QP P +G +
Sbjct: 300 GTPDEPMDLEGAEDNHLSLLEAPGGQPRKSLRHSTRKKEWGKKEPVAGSPFERREAGPKG 359
Query: 60 LSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQP-SGEHASGEQASGAPISSTSTGG 116
E GE D P+G SG PSG P E +G+ AS S S GG
Sbjct: 360 PCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQSGSEGG 417
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQ---PSGEQPSGEHLSGEQPLSELESGEQPSD 71
SA G SG +TS ++ + PSG + SG + LS L SG++
Sbjct: 1424 SASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGKEDLV 1483
Query: 72 EQPSGEHGSGEQPSGEQASGEQP---------SGEHASGEQASGAP 108
SG+ G+ PSG SG+ P SGE++ + SG P
Sbjct: 1484 GSASGDLDLGKLPSGTLGSGQAPETSGLPSGFSGEYSGVDLGSGPP 1529
Score = 37.0 bits (84), Expect = 0.007
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 35 SVQQLPGEQPSGEQPSGE-HLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQ 93
SV Q P Q +GE PSG LSG + SGE SG +PSGE
Sbjct: 1830 SVTQAPTAQEAGEGPSGILELSGAHSGAPDMSGEHSGFLDLSGLQSGLIEPSGEPPGTPY 1889
Query: 94 PSGEHASGEQASGAPISSTSTGGK 117
SG+ AS SG + T G+
Sbjct: 1890 FSGDFASTTNVSGESSVAMGTSGE 1913
Score = 35.8 bits (81), Expect = 0.015
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 10 LYLLGSARGTSSQPNELSGSIDHQTSVQ-QLPG-----EQPSGEQPSGEHLSGEQPLSEL 63
L + G A G S ELSG V ++PG QPSG + SG LS L
Sbjct: 1586 LDISGRASGLPSG-TELSGQASGSPDVSGEIPGLFGVSGQPSGFPDTSGETSGVTELSGL 1644
Query: 64 ESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGG 116
SG+ + SG QP G + SG Q SG P S +T G
Sbjct: 1645 SSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGFSGATSG 1697
Score = 35.4 bits (80), Expect = 0.020
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHLS----GEQPLSELESGEQPSDEQPSGEHGS 80
++SG + PG + PSGE L G + +S L SGE P + S
Sbjct: 1257 DISGLPSGEVLETAAPGVEDISGLPSGEVLETTAPGVEEISGLPSGEVLETTAPGVDEIS 1316
Query: 81 GEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQFMVQGCE 126
G PSGE P E SG + +STS G L + G E
Sbjct: 1317 G-LPSGEVLETTAPGVEEISGLPSGEVLETSTSAVGDLSGLPSGGE 1361
Score = 32.3 bits (72), Expect = 0.17
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHL----SGEQPLSELESGEQPSDEQPSGEHGS 80
++SG + G + E PSGE L SG + LS L SGE+ + SG
Sbjct: 1372 DISGLPSGEVVETSASGIEDVSELPSGEGLETSASGVEDLSRLPSGEEVLEISASGFGDL 1431
Query: 81 GEQPSG----EQASGE-------QPSGEHASGEQASGAPISSTSTGGK 117
PSG E ++ E PSG ASGA S GK
Sbjct: 1432 SGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGK 1479
Score = 31.2 bits (69), Expect = 0.37
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 35 SVQQLPGEQPSGEQ---PSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASG 91
SV+ P E+P + PS E + E+P + ++ SGE SG+
Sbjct: 814 SVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGS 873
Query: 92 EQPSGE-----HASGEQASGAPISSTSTGG 116
SG SG++ASG P + G
Sbjct: 874 GDVSGHLDFSGQLSGDRASGLPSGDLDSSG 903
Score = 30.8 bits (68), Expect = 0.49
Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 21/94 (22%)
Query: 41 GEQPSGEQ---------------PSGEHL----SGEQPLSELESGEQPSDEQPSGEHGSG 81
GE PSG + PSGE L SG LS L SGE P E SG
Sbjct: 935 GELPSGAEILEGSASGVGDLSGLPSGEVLETSASGVGDLSGLPSGEVLETTAPGVEDISG 994
Query: 82 EQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 115
PSGE P E SG SG + +T+ G
Sbjct: 995 -LPSGEVLETTAPGVEDISG-LPSGEVLETTAPG 1026
Score = 30.0 bits (66), Expect = 0.83
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 15/109 (13%)
Query: 19 TSSQPNELSG----SIDHQTSVQQLPGEQP--SGEQ---PSGEHLSGEQPLSELESGEQP 69
T+S +EL G I + LP + SG PSG LSG+ S SGE P
Sbjct: 1557 TASTASELEGRGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIP 1616
Query: 70 SDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKL 118
G G QPSG + + SG +SG P S G L
Sbjct: 1617 ------GLFGVSGQPSGFPDTSGETSGVTELSGLSSGQPGISGEASGVL 1659
Score = 28.9 bits (63), Expect = 1.9
Identities = 28/106 (26%), Positives = 36/106 (33%), Gaps = 11/106 (10%)
Query: 27 SGSIDHQTSVQQLPGEQPSGEQ---------PSGEHLSGEQPLSELESGEQPSDEQPSGE 77
S S + S P E+PS + PS E E+P E PS+E + E
Sbjct: 782 SASEEPSPSEVPFPSEEPSPSEEPFPSVRPFPSVELFPSEEPFPSKEPS--PSEEPSASE 839
Query: 78 HGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQFMVQ 123
P + SGE + SG S G L F Q
Sbjct: 840 EPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGSGDVSGHLDFSGQ 885
Score = 27.3 bits (59), Expect = 5.4
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 17 RGTS--SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGE-----HLSGEQPLSELESGEQP 69
RGT S E+SG + + PSG + SG+ +SGE P SG+
Sbjct: 1567 RGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIPGLFGVSGQPS 1626
Query: 70 SDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGK 117
SGE + SG + SGE + + P T G+
Sbjct: 1627 GFPDTSGETSGVTELSGLSSGQPGISGEASGVLYGTSQPFGITDLSGE 1674
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQ---PSGEQPSGEHLSGEQPLSELESGEQPSD 71
SA G SG +TS ++ + PSG + SG + LS L SG++
Sbjct: 1424 SASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGKEDLV 1483
Query: 72 EQPSGEHGSGEQPSGEQASGEQP---------SGEHASGEQASGAP 108
SG+ G+ PSG SG+ P SGE++ + SG P
Sbjct: 1484 GSASGDLDLGKLPSGTLGSGQAPETSGLPSGFSGEYSGVDLGSGPP 1529
Score = 37.0 bits (84), Expect = 0.007
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 35 SVQQLPGEQPSGEQPSGE-HLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQ 93
SV Q P Q +GE PSG LSG + SGE SG +PSGE
Sbjct: 1830 SVTQAPTAQEAGEGPSGILELSGAHSGAPDMSGEHSGFLDLSGLQSGLIEPSGEPPGTPY 1889
Query: 94 PSGEHASGEQASGAPISSTSTGGK 117
SG+ AS SG + T G+
Sbjct: 1890 FSGDFASTTNVSGESSVAMGTSGE 1913
Score = 35.8 bits (81), Expect = 0.015
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 10 LYLLGSARGTSSQPNELSGSIDHQTSVQ-QLPG-----EQPSGEQPSGEHLSGEQPLSEL 63
L + G A G S ELSG V ++PG QPSG + SG LS L
Sbjct: 1586 LDISGRASGLPSG-TELSGQASGSPDVSGEIPGLFGVSGQPSGFPDTSGETSGVTELSGL 1644
Query: 64 ESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGG 116
SG+ + SG QP G + SG Q SG P S +T G
Sbjct: 1645 SSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGFSGATSG 1697
Score = 35.4 bits (80), Expect = 0.020
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHLS----GEQPLSELESGEQPSDEQPSGEHGS 80
++SG + PG + PSGE L G + +S L SGE P + S
Sbjct: 1257 DISGLPSGEVLETAAPGVEDISGLPSGEVLETTAPGVEEISGLPSGEVLETTAPGVDEIS 1316
Query: 81 GEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQFMVQGCE 126
G PSGE P E SG + +STS G L + G E
Sbjct: 1317 G-LPSGEVLETTAPGVEEISGLPSGEVLETSTSAVGDLSGLPSGGE 1361
Score = 32.3 bits (72), Expect = 0.17
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHL----SGEQPLSELESGEQPSDEQPSGEHGS 80
++SG + G + E PSGE L SG + LS L SGE+ + SG
Sbjct: 1372 DISGLPSGEVVETSASGIEDVSELPSGEGLETSASGVEDLSRLPSGEEVLEISASGFGDL 1431
Query: 81 GEQPSG----EQASGE-------QPSGEHASGEQASGAPISSTSTGGK 117
PSG E ++ E PSG ASGA S GK
Sbjct: 1432 SGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGK 1479
Score = 31.2 bits (69), Expect = 0.37
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 35 SVQQLPGEQPSGEQ---PSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASG 91
SV+ P E+P + PS E + E+P + ++ SGE SG+
Sbjct: 814 SVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGS 873
Query: 92 EQPSGE-----HASGEQASGAPISSTSTGG 116
SG SG++ASG P + G
Sbjct: 874 GDVSGHLDFSGQLSGDRASGLPSGDLDSSG 903
Score = 30.8 bits (68), Expect = 0.49
Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 21/94 (22%)
Query: 41 GEQPSGEQ---------------PSGEHL----SGEQPLSELESGEQPSDEQPSGEHGSG 81
GE PSG + PSGE L SG LS L SGE P E SG
Sbjct: 935 GELPSGAEILEGSASGVGDLSGLPSGEVLETSASGVGDLSGLPSGEVLETTAPGVEDISG 994
Query: 82 EQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 115
PSGE P E SG SG + +T+ G
Sbjct: 995 -LPSGEVLETTAPGVEDISG-LPSGEVLETTAPG 1026
Score = 30.0 bits (66), Expect = 0.83
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 15/109 (13%)
Query: 19 TSSQPNELSG----SIDHQTSVQQLPGEQP--SGEQ---PSGEHLSGEQPLSELESGEQP 69
T+S +EL G I + LP + SG PSG LSG+ S SGE P
Sbjct: 1557 TASTASELEGRGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIP 1616
Query: 70 SDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKL 118
G G QPSG + + SG +SG P S G L
Sbjct: 1617 ------GLFGVSGQPSGFPDTSGETSGVTELSGLSSGQPGISGEASGVL 1659
Score = 28.9 bits (63), Expect = 1.9
Identities = 28/106 (26%), Positives = 36/106 (33%), Gaps = 11/106 (10%)
Query: 27 SGSIDHQTSVQQLPGEQPSGEQ---------PSGEHLSGEQPLSELESGEQPSDEQPSGE 77
S S + S P E+PS + PS E E+P E PS+E + E
Sbjct: 782 SASEEPSPSEVPFPSEEPSPSEEPFPSVRPFPSVELFPSEEPFPSKEPS--PSEEPSASE 839
Query: 78 HGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQFMVQ 123
P + SGE + SG S G L F Q
Sbjct: 840 EPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGSGDVSGHLDFSGQ 885
Score = 27.3 bits (59), Expect = 5.4
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 17 RGTS--SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGE-----HLSGEQPLSELESGEQP 69
RGT S E+SG + + PSG + SG+ +SGE P SG+
Sbjct: 1567 RGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIPGLFGVSGQPS 1626
Query: 70 SDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGK 117
SGE + SG + SGE + + P T G+
Sbjct: 1627 GFPDTSGETSGVTELSGLSSGQPGISGEASGVLYGTSQPFGITDLSGE 1674
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 38.5 bits (88), Expect = 0.002
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-- 71
G+ SQ EL + ++ V++ ++ E+P + E+PLS+ E+P
Sbjct: 98 GTQHDPLSQEAELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
Query: 72 ---EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQ 103
E+P + E+P +++ E+P + + E+
Sbjct: 158 SEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEE 192
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-----EQPS 75
SQ +E+ + ++ V++ ++ E+P + E+PLS+ E+P E+P
Sbjct: 115 SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPL 174
Query: 76 GEHGSGEQPSGEQASGEQPSGEHASGEQ 103
+ E+P +++ E+P + + E+
Sbjct: 175 SQESEMEEPLSQESQVEEPPSQESEMEE 202
Score = 32.7 bits (73), Expect = 0.13
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 30/118 (25%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQPSGE--------------QPSGEHLSGEQPL 60
+A G S QP++ + +LP E+P E +P + E+PL
Sbjct: 72 AAPGPSDQPSQ-------ELPQHELPPEEPVSEGTQHDPLSQEAELEEPLSQESEVEEPL 124
Query: 61 SELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTS 113
S+ E+P E+P + E+P +++ E+P + + E+ P+S S
Sbjct: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE----PLSQES 178
>gi|31657109 zinc finger protein 282 [Homo sapiens]
Length = 671
Score = 38.1 bits (87), Expect = 0.003
Identities = 38/144 (26%), Positives = 49/144 (34%), Gaps = 26/144 (18%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPS-- 75
G S P++ + + P QP QP + Q L + E P PS
Sbjct: 388 GLDSGPSDSLLMVKNPPPAPPQPQPQPQPPQPQLQSQPQPQSLPPIAVAENPGGP-PSRG 446
Query: 76 ----------GEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQFMVQGC 125
GE GSGE P G S G+ G G + T GG GC
Sbjct: 447 LLDDGFQVLPGERGSGEAPPGGDRSTGGGGGDGGGG---GGGAEAGTGAGG-------GC 496
Query: 126 ENMCPS---MNLFSHGTRMQIICC 146
+ CP +L HG R + C
Sbjct: 497 GSCCPGGLRRSLLLHGARSKPYSC 520
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 37.0 bits (84), Expect = 0.007
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 32 HQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGE--QPSDEQPSGEHGSGEQPSGEQA 89
H+ S G S + G SG S+ +G +P + P + GSG +
Sbjct: 569 HELSSYTYGGGSASSQHSEGSRSSGSTR-SDGGAGRTGRPEERAPESKSGSGSESEPSSR 627
Query: 90 SGEQPSGEHASGEQASGAPISSTSTGG 116
G G ASG G P S STGG
Sbjct: 628 GGSLRRGGEASGTSDGGPPPSRGSTGG 654
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 36.6 bits (83), Expect = 0.009
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 28 GSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE 87
G ++ ++ E+ GE+ GE GE+ E E E + GE G GE+ E
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEEEGE---GEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEE 873
Query: 88 -QASGEQPSGEHASGEQASG 106
+ GE+ GE E+ G
Sbjct: 874 GEGEGEEEEGEGEGEEEGEG 893
Score = 33.5 bits (75), Expect = 0.075
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEHGSGEQ 83
E S +H ++ GE+ G GE+ L+E E ++ +EQ E G Q
Sbjct: 661 EGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQ 720
Query: 84 PSGEQASGEQPSGEHASGEQASG 106
Q E EH GE+ G
Sbjct: 721 KERNQEMEEGGEEEHGEGEEEEG 743
Score = 33.5 bits (75), Expect = 0.075
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHAS 100
GE+ GE E GE E E GE +E+ G GE+ GE GE GE
Sbjct: 895 GEEEEGEGEGEEEGEGE---GEEEEGEGKGEEEGEEGEGEGEEEEGE-GEGEDGEGE--- 947
Query: 101 GEQASG 106
GE+ G
Sbjct: 948 GEEEEG 953
Score = 33.1 bits (74), Expect = 0.098
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 47 EQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 106
E+ GE + GE+ E E GE+ +E+ +G+ GE+ G+Q GE+ E E+ G
Sbjct: 757 EEGEGEEVEGER---EKEEGERKKEER-AGKEEKGEE-EGDQGEGEEEETEGRGEEKEEG 811
Query: 107 APISSTSTGGKLQ 119
+ GG+++
Sbjct: 812 GEVE----GGEVE 820
Score = 33.1 bits (74), Expect = 0.098
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
GE+ GE E+ E E GE +E E G GE GE+ GE+ E GE+
Sbjct: 957 GEEEEGEGEGEEEGEGEGEEGEGEGEE----EEGEGE---GEEEEGEEEGEEEGEGEE-E 1008
Query: 106 GAPISSTSTGGKLQFMVQGCE 126
G G+++ V+G E
Sbjct: 1009 GEGEGEEEEEGEVEGEVEGEE 1029
Score = 32.3 bits (72), Expect = 0.17
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 42 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEH--GSGEQPSGEQASGEQPSGEHA 99
E+ GE+ GE GE+ E E E+ + + GE G GE + GE+ GE
Sbjct: 845 EEGEGEEEEGEG-KGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGE 903
Query: 100 SGEQASG 106
E+ G
Sbjct: 904 GEEEGEG 910
Score = 32.3 bits (72), Expect = 0.17
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 41 GEQPSGE---QPSGEHLSGEQPLSELES-GEQPSDEQPSGEHGSGEQPSGEQASGEQPSG 96
GE+ GE + GE GE+ E E GE+ E E G GE GE+ GE
Sbjct: 849 GEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGE---GEEEEGEGEGE 905
Query: 97 EHASGE 102
E GE
Sbjct: 906 EEGEGE 911
Score = 32.3 bits (72), Expect = 0.17
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHAS 100
GE+ GE E GE E E GE +E+ GE GE+ GE E+
Sbjct: 878 GEEEEGEGEGEEEGEGE---GEEEEGEGEGEEEGEGE---GEEEEGEGKGEEEGEEGEGE 931
Query: 101 GEQASG 106
GE+ G
Sbjct: 932 GEEEEG 937
Score = 32.0 bits (71), Expect = 0.22
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 41 GEQPSGEQPSGEHLSGE-QPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHA 99
GE+ E+ + GE Q E E G Q Q E G E GE+ G++ E
Sbjct: 692 GEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEK 751
Query: 100 SGE 102
GE
Sbjct: 752 EGE 754
Score = 32.0 bits (71), Expect = 0.22
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPS-- 75
G + E G + + GE+ GE GE GE E E GE +E+
Sbjct: 902 GEGEEEGEGEGEEEEGEGKGEEEGEEGEGE---GEEEEGE---GEGEDGEGEGEEEEGEW 955
Query: 76 -GEHGSGEQPSGEQASGEQPSGEHASGEQASG 106
GE GE E+ GE GE GE+ G
Sbjct: 956 EGEEEEGEGEGEEEGEGEGEEGE-GEGEEEEG 986
Score = 31.6 bits (70), Expect = 0.29
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 42 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGE--HGSGEQPSGE---QASGEQPSG 96
++ GE GE G+ E E + +E+ GE G GE+ GE + GE+ G
Sbjct: 808 KEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEG 867
Query: 97 EHASGEQASG 106
E GE+ G
Sbjct: 868 EE-EGEEGEG 876
Score = 31.2 bits (69), Expect = 0.37
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 43 QPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGE 102
+ GE+ GE GE+ E E E + + GE G GE+ GE E+ GE GE
Sbjct: 859 EEEGEEGEGEE-EGEEGEGEGEEEEGEGEGEEEGE-GEGEEEEGEGEGEEEGEGE---GE 913
Query: 103 QASG 106
+ G
Sbjct: 914 EEEG 917
Score = 31.2 bits (69), Expect = 0.37
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELES---GEQPSDEQPSGEHGSGEQPSGEQASGEQPSGE 97
GE E+ GE GE E E GE+ E+ E G GE+ GE E+ GE
Sbjct: 962 GEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEE-EGEGEGEEEEEGE 1020
Query: 98 ---HASGEQASG 106
GE+ G
Sbjct: 1021 VEGEVEGEEGEG 1032
Score = 30.8 bits (68), Expect = 0.49
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE-QPSGEHA 99
GE+ GE GE GE E E E+ +E E G GE E+ E + GE
Sbjct: 974 GEEGEGE---GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEG 1030
Query: 100 SGE 102
GE
Sbjct: 1031 EGE 1033
Score = 30.4 bits (67), Expect = 0.64
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 31 DHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG---EHGSGEQPSG- 86
+ Q ++ G Q Q E E E E G++ +E+ G E G GE+ G
Sbjct: 708 EEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGE 767
Query: 87 -EQASGEQPSGEHASGEQ 103
E+ GE+ E A E+
Sbjct: 768 REKEEGERKKEERAGKEE 785
Score = 30.4 bits (67), Expect = 0.64
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGE-HGSGEQPSGEQASGEQPSGEHA 99
GE+ GE+ E GE E GE +E+ GE G E GE GE+ GE
Sbjct: 990 GEEEEGEEEGEEEGEGE------EEGEGEGEEEEEGEVEGEVEGEEGE-GEGEEEEGEEE 1042
Query: 100 SGEQ 103
E+
Sbjct: 1043 GEER 1046
Score = 29.6 bits (65), Expect = 1.1
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE---QASGEQPSGEHASGE 102
GE+ GE GE+ E E GE+ + + GE E+ GE + GE+ GE GE
Sbjct: 981 GEEEEGEG-EGEEEEGE-EEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGE---GE 1035
Query: 103 QASG 106
+ G
Sbjct: 1036 EEEG 1039
Score = 29.3 bits (64), Expect = 1.4
Identities = 22/95 (23%), Positives = 34/95 (35%)
Query: 32 HQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASG 91
HQ Q E E GE G++ E + GE + + G E+ GE+
Sbjct: 719 HQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKE 778
Query: 92 EQPSGEHASGEQASGAPISSTSTGGKLQFMVQGCE 126
E+ E E+ T G+ + +G E
Sbjct: 779 ERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGE 813
Score = 29.3 bits (64), Expect = 1.4
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 42 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG--------EHGSGE-QPSGEQASGE 92
E+ +G++ GE G+Q E E E +E+ G E G GE + E+ GE
Sbjct: 778 EERAGKEEKGEE-EGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGE 836
Query: 93 QPSGEHASGEQASG 106
+ GE GE+ G
Sbjct: 837 EEEGE---GEEEEG 847
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 36.6 bits (83), Expect = 0.009
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLS-ELESGEQPSDE 72
G +P S S + ++ +PG+ PS PS E GE+ S +L SG
Sbjct: 483 GKLNSAKKEPMAPSHSGIPKPGMKSMPGKSPSAPAPSKE---GERSRSGKLSSGLPQQKP 539
Query: 73 QPSGEHGSGEQPSGEQASGEQPSG---EHASGEQASGAPISSTSTGGKLQFMVQ 123
Q G H S S + G+ P G H+ Q + +T T G VQ
Sbjct: 540 QLDGRHSSSSS-SLASSEGKGPGGTTLNHSISSQTVSGSVGTTQTTGSNTVSVQ 592
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 36.6 bits (83), Expect = 0.009
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLS-ELESGEQPSDE 72
G +P S S + ++ +PG+ PS PS E GE+ S +L SG
Sbjct: 547 GKLNSAKKEPMAPSHSGIPKPGMKSMPGKSPSAPAPSKE---GERSRSGKLSSGLPQQKP 603
Query: 73 QPSGEHGSGEQPSGEQASGEQPSG---EHASGEQASGAPISSTSTGGKLQFMVQ 123
Q G H S S + G+ P G H+ Q + +T T G VQ
Sbjct: 604 QLDGRHSSSSS-SLASSEGKGPGGTTLNHSISSQTVSGSVGTTQTTGSNTVSVQ 656
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 36.6 bits (83), Expect = 0.009
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLS-ELESGEQPSDE 72
G +P S S + ++ +PG+ PS PS E GE+ S +L SG
Sbjct: 547 GKLNSAKKEPMAPSHSGIPKPGMKSMPGKSPSAPAPSKE---GERSRSGKLSSGLPQQKP 603
Query: 73 QPSGEHGSGEQPSGEQASGEQPSG---EHASGEQASGAPISSTSTGGKLQFMVQ 123
Q G H S S + G+ P G H+ Q + +T T G VQ
Sbjct: 604 QLDGRHSSSSS-SLASSEGKGPGGTTLNHSISSQTVSGSVGTTQTTGSNTVSVQ 656
>gi|48762947 variable charge, X-linked 3A [Homo sapiens]
Length = 186
Score = 35.8 bits (81), Expect = 0.015
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
G+ SQ +EL + ++ V++ ++ E+P + E+PLS+ E+P ++
Sbjct: 98 GTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQ 103
E+P +++ E+P + + E+
Sbjct: 158 -----SEVEEPLSQESQVEEPLSQESEMEE 182
Score = 32.7 bits (73), Expect = 0.13
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 30/118 (25%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQPSGE--------------QPSGEHLSGEQPL 60
+A G S QP++ + +LP E+P E +P + E+PL
Sbjct: 72 AAPGPSDQPSQ-------ELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPL 124
Query: 61 SELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTS 113
S+ E+P E+P + E+P +++ E+P + + E+ P+S S
Sbjct: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE----PLSQES 178
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 35.8 bits (81), Expect = 0.015
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 33 QTSVQQLPGEQPSGEQPSGEH-LSGEQPLSELES--GEQPSDEQPSGEHGSGEQPSGEQA 89
Q++ QQ P QP QP + +QP S +Q + QP + S ++
Sbjct: 538 QSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRF 597
Query: 90 SGEQPSGEHASGEQASGAPISSTSTGGK 117
Q + + G QAS AP ++S GG+
Sbjct: 598 PPPQELSQDSFGSQASSAPSMTSSKGGQ 625
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 35.8 bits (81), Expect = 0.015
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 33 QTSVQQLPGEQPSGEQPSGEH-LSGEQPLSELES--GEQPSDEQPSGEHGSGEQPSGEQA 89
Q++ QQ P QP QP + +QP S +Q + QP + S ++
Sbjct: 538 QSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRF 597
Query: 90 SGEQPSGEHASGEQASGAPISSTSTGGK 117
Q + + G QAS AP ++S GG+
Sbjct: 598 PPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.126 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,257,669
Number of Sequences: 37866
Number of extensions: 435048
Number of successful extensions: 4253
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 2833
Number of HSP's gapped (non-prelim): 1266
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.