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Search of human proteins with 9910382
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9910382 mitochondrial import receptor Tom22 [Homo sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9910382 mitochondrial import receptor Tom22 [Homo sapiens] 281 2e-76
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 36 0.012
gi|24497589 aristaless related homeobox [Homo sapiens] 36 0.012
gi|4503249 DEK oncogene isoform 1 [Homo sapiens] 34 0.036
gi|197927454 DEK oncogene isoform 2 [Homo sapiens] 34 0.047
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 33 0.079
gi|158631177 homeodomain leucine zipper protein [Homo sapiens] 33 0.079
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 33 0.079
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 32 0.14
gi|17402873 BRCA2 and CDKN1A-interacting protein isoform C [Homo... 32 0.18
gi|17402871 BRCA2 and CDKN1A-interacting protein isoform BCCIPbe... 32 0.18
gi|7706581 BRCA2 and CDKN1A-interacting protein isoform BCCIPalp... 32 0.18
gi|46276887 WD repeat domain 78 isoform 1 [Homo sapiens] 32 0.23
gi|46276885 WD repeat domain 78 isoform 2 [Homo sapiens] 32 0.23
gi|56786136 sperm-specific sodium proton exchanger [Homo sapiens] 31 0.30
gi|51477718 TATA box binding protein-associated factor, RNA poly... 31 0.30
gi|239756451 PREDICTED: hypothetical protein XP_002344991 [Homo ... 31 0.39
gi|239750982 PREDICTED: hypothetical protein XP_002347636 [Homo ... 31 0.39
gi|239745387 PREDICTED: hypothetical protein XP_002343486 [Homo ... 31 0.39
gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens] 31 0.39
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 31 0.39
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 31 0.39
gi|55741655 anoctamin 8 [Homo sapiens] 30 0.52
gi|124244056 family with sequence similarity 123B [Homo sapiens] 30 0.52
gi|49087132 sal-like 2 [Homo sapiens] 30 0.52
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 30 0.67
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 30 0.67
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens] 30 0.67
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens] 30 0.67
gi|4505419 nucleolar protein 3 [Homo sapiens] 30 0.67
>gi|9910382 mitochondrial import receptor Tom22 [Homo sapiens]
Length = 142
Score = 281 bits (718), Expect = 2e-76
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MAAAVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTEMFPERVR 60
MAAAVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTEMFPERVR
Sbjct: 1 MAAAVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTEMFPERVR 60
Query: 61 SAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQIL 120
SAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQIL
Sbjct: 61 SAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQIL 120
Query: 121 LGPNTGLSGGMPGALPSLPGKI 142
LGPNTGLSGGMPGALPSLPGKI
Sbjct: 121 LGPNTGLSGGMPGALPSLPGKI 142
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 35.8 bits (81), Expect = 0.012
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 14/74 (18%)
Query: 3 AAVAAAGAGEPQSPDELLPKGDAEKPEEELE----EDDDEELDETLSER-------LWGL 51
AA AAA AGE DE + + E PEEE E EDDDE+ D+ +
Sbjct: 1663 AAAAAAAAGESSQEDE---EEELELPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDS 1719
Query: 52 TEMFPERVRSAAGA 65
E PE AAGA
Sbjct: 1720 EESLPEAAAEAAGA 1733
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 35.8 bits (81), Expect = 0.012
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 2 AAAVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDE 42
+A A G G +ELL + E EEEL EDD+EEL E
Sbjct: 213 SAPAAGGGTGTEDDEEELLEDEEDEDEEEELLEDDEEELLE 253
>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
Length = 375
Score = 34.3 bits (77), Expect = 0.036
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 2 AAAVAAAGAGEPQSP-DELLPK--GDAEKPEEELEEDDDEELDETLSERL 48
A+A AA G G P P E P+ G E+ EEE +EDD+EE +E + L
Sbjct: 3 ASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEKEKSL 52
>gi|197927454 DEK oncogene isoform 2 [Homo sapiens]
Length = 341
Score = 33.9 bits (76), Expect = 0.047
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 2 AAAVAAAGAGEPQSP-DELLPK--GDAEKPEEELEEDDDEELDE 42
A+A AA G G P P E P+ G E+ EEE +EDD+EE +E
Sbjct: 3 ASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEE 46
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 33.1 bits (74), Expect = 0.079
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 9 GAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTEMFPERVRSAAGAT 66
G GE ++ E P+ ++ E+E EE+DDEE ++ S G E E + ++G +
Sbjct: 75 GGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLVGSSGGS 132
Score = 27.7 bits (60), Expect = 3.3
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 13 PQSPDELLPKGDAEKPEEELEEDDDEE 39
P SP +G AE PEEE EE+++EE
Sbjct: 22 PGSPGSAA-RGRAEPPEEEEEEEEEEE 47
>gi|158631177 homeodomain leucine zipper protein [Homo sapiens]
Length = 550
Score = 33.1 bits (74), Expect = 0.079
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 12 EPQSPDELLPKGDAEKPEEELEEDDDEELDETLSE 46
E + +E LP+ D E+ EEE E+DDD++ D + +
Sbjct: 516 EEEEEEEELPEDDEEEEEEEEEDDDDDDDDVIIQD 550
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.079
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 9 GAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTEMFPERVRSAAGAT 66
G GE ++ E P+ ++ E+E EE+DDEE ++ S G E E + ++G +
Sbjct: 75 GGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLVGSSGGS 132
Score = 27.7 bits (60), Expect = 3.3
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 13 PQSPDELLPKGDAEKPEEELEEDDDEE 39
P SP +G AE PEEE EE+++EE
Sbjct: 22 PGSPGSAA-RGRAEPPEEEEEEEEEEE 47
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 32.3 bits (72), Expect = 0.14
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 7 AAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTE 53
++ AG P SP+E + E+ EEE EE++DEE +E LS+ + ++E
Sbjct: 259 SSSAGTP-SPEE-----EEEEEEEEEEEEEDEEEEEGLSQSISRISE 299
Score = 30.0 bits (66), Expect = 0.67
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 12 EPQSPDELLPKGDA--EKPEEELEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDL 69
+P P P A PEEE EE+++EE +E E GL++ + AG D
Sbjct: 249 DPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGIYDDN 308
Query: 70 SL 71
SL
Sbjct: 309 SL 310
Score = 27.7 bits (60), Expect = 3.3
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 14 QSPDELLPKGDAEKPEEELEEDDDEELDE 42
++ +E +G AE+ EEE EE+++EE +E
Sbjct: 1010 EATEEAGVRGGAEEEEEEEEEEEEEEEEE 1038
Score = 26.6 bits (57), Expect = 7.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 4 AVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDE 38
+V AG P LLP GD+E E E+ + ++E
Sbjct: 368 SVEVVTAGGAALPPPLLPPGDSEIEEGEIVQPEEE 402
>gi|17402873 BRCA2 and CDKN1A-interacting protein isoform C [Homo
sapiens]
Length = 292
Score = 32.0 bits (71), Expect = 0.18
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 7 AAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSE 46
A +G PQ PD + + + E+ E E E++DD++ D+ E
Sbjct: 9 AVESGVPQPPDPPVQRDEEEEKEVENEDEDDDDSDKEKDE 48
>gi|17402871 BRCA2 and CDKN1A-interacting protein isoform
BCCIPbeta [Homo sapiens]
Length = 314
Score = 32.0 bits (71), Expect = 0.18
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 7 AAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSE 46
A +G PQ PD + + + E+ E E E++DD++ D+ E
Sbjct: 9 AVESGVPQPPDPPVQRDEEEEKEVENEDEDDDDSDKEKDE 48
>gi|7706581 BRCA2 and CDKN1A-interacting protein isoform
BCCIPalpha [Homo sapiens]
Length = 322
Score = 32.0 bits (71), Expect = 0.18
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 7 AAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSE 46
A +G PQ PD + + + E+ E E E++DD++ D+ E
Sbjct: 9 AVESGVPQPPDPPVQRDEEEEKEVENEDEDDDDSDKEKDE 48
>gi|46276887 WD repeat domain 78 isoform 1 [Homo sapiens]
Length = 848
Score = 31.6 bits (70), Expect = 0.23
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 12 EPQSPDELLPKGDAEKPEEELEEDDDEELDETLS------ERLWGLT 52
EP+ P+++L E+ EEE +++++EE+ S ERLW +
Sbjct: 433 EPEEPEDVLESAKHEEVEEESKKEEEEEIHAEESTIPANLERLWSFS 479
>gi|46276885 WD repeat domain 78 isoform 2 [Homo sapiens]
Length = 545
Score = 31.6 bits (70), Expect = 0.23
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 12 EPQSPDELLPKGDAEKPEEELEEDDDEELDETLS------ERLWGLT 52
EP+ P+++L E+ EEE +++++EE+ S ERLW +
Sbjct: 433 EPEEPEDVLESAKHEEVEEESKKEEEEEIHAEESTIPANLERLWSFS 479
>gi|56786136 sperm-specific sodium proton exchanger [Homo sapiens]
Length = 1177
Score = 31.2 bits (69), Expect = 0.30
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 64 GATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQME 109
G +F++ F + ++ R++ A W+ F + PVVF T M+
Sbjct: 51 GCSFEVLSFTSSQVQRYANAIQWMSPDLFFRIFTPVVFFTTAFDMD 96
>gi|51477718 TATA box binding protein-associated factor, RNA
polymerase II, Q [Homo sapiens]
Length = 462
Score = 31.2 bits (69), Expect = 0.30
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 24 DAEKPEEELEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRA 83
D ++ +E+ +ED+DE+ DE E +E + ER A F+ YR +
Sbjct: 335 DEDEDDEDEDEDEDEDEDEDKEEEEEDCSEEYLERQLQAE--------FIESGQYRANE- 385
Query: 84 ALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILL 121
GT+S ++ + + + EK + Q + Q+++ L+
Sbjct: 386 ----GTSSIVMEIQKQIEKKEKKLHKIQNKAQRQKDLI 419
>gi|239756451 PREDICTED: hypothetical protein XP_002344991 [Homo
sapiens]
Length = 197
Score = 30.8 bits (68), Expect = 0.39
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 2 AAAVAAAGAGEPQSPDELLPK-----GDAEKPEEELEEDDDEE 39
+A G EP EL P+ D ++ EEELE+DDDEE
Sbjct: 112 SATSGCTGRLEPSESLELEPEEEEDDDDDDEEEEELEDDDDEE 154
>gi|239750982 PREDICTED: hypothetical protein XP_002347636 [Homo
sapiens]
Length = 206
Score = 30.8 bits (68), Expect = 0.39
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 2 AAAVAAAGAGEPQSPDELLPK-----GDAEKPEEELEEDDDEE 39
+A G EP EL P+ D ++ EEELE+DDDEE
Sbjct: 121 SATSGCTGRLEPSESLELEPEEEEDDDDDDEEEEELEDDDDEE 163
>gi|239745387 PREDICTED: hypothetical protein XP_002343486 [Homo
sapiens]
Length = 197
Score = 30.8 bits (68), Expect = 0.39
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 2 AAAVAAAGAGEPQSPDELLPK-----GDAEKPEEELEEDDDEE 39
+A G EP EL P+ D ++ EEELE+DDDEE
Sbjct: 112 SATSGCTGRLEPSESLELEPEEEEDDDDDDEEEEELEDDDDEE 154
>gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]
Length = 1007
Score = 30.8 bits (68), Expect = 0.39
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 3 AAVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTEMFPERVRSA 62
AAV AGAGEP P LL + E+ +E E L++ + T PE + +
Sbjct: 421 AAVTGAGAGEPSRPVCLLLEQAMERATQEPSEHGPWTLEQLRA------TLKRPEVIATC 474
Query: 63 AGATFDLSLFVAQKMYRFSRAALWIG 88
A + L L A ++R RA + +G
Sbjct: 475 GVALWLLLLGTAVCIHRRRRARVHLG 500
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 30.8 bits (68), Expect = 0.39
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 4 AVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDEE 39
+VA+ + DE + KG+AE+ EEE +E+D E
Sbjct: 992 SVASGDDRAEEDMDEAIEKGEAEQSEEEADEEDKAE 1027
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 30.8 bits (68), Expect = 0.39
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 1 MAAAVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDD-EELDE 42
+AA + AGA + Q P + K EK +++ +EDD +EL+E
Sbjct: 22 LAAEIEGAGAAKEQEPQKSKGKKKKEKKKQDFDEDDILKELEE 64
Score = 27.7 bits (60), Expect = 3.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 26 EKPEEELEEDDDEELDETLSE 46
E PEEE EE+++EE DE E
Sbjct: 529 ENPEEEEEEEEEEEEDEESEE 549
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 30.4 bits (67), Expect = 0.52
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 2 AAAVAAAGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSE 46
AA V AGE + P G E ++E EED++EE DE E
Sbjct: 559 AALVERRRAGEGGEEGDGPPGGKEEDEDDEEEEDEEEEEDEEEGE 603
>gi|124244056 family with sequence similarity 123B [Homo sapiens]
Length = 1135
Score = 30.4 bits (67), Expect = 0.52
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 5 VAAAGAGE----PQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWGLTEMFP 56
V G GE P DE + + + EEE EE +EE D+ L E LW +M+P
Sbjct: 363 VTYQGGGEEMALPDDDDEEEEEEEEVELEEEEEEVKEEEEDDDL-EYLWETAQMYP 417
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 30.4 bits (67), Expect = 0.52
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 8 AGAGEPQSPDELLPKGDAEKPEEELEEDDDEELDETLSERLWG 50
+GAG P + E EEE EED++EE D T + L G
Sbjct: 743 SGAGSFPQQQSQQPSPEEELSEEEEEEDEEEEEDVTDEDSLAG 785
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 10/54 (18%)
Query: 95 LVLPVVFETEKLQMEQQQQLQQ--------RQILLGPNTGLSGGMPGALPSLPG 140
L +P++ E +L++ QQ+Q+ Q RQ+LL + G + G P + LPG
Sbjct: 177 LNIPLILE--ELRVLQQRQIHQMQMTEQICRQVLLLGSLGQTVGAPASPSELPG 228
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 30.0 bits (66), Expect = 0.67
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 4 AVAAAGAGEPQSPDELLPKGDA-EKPEEELEEDDDEELDETLSER 47
A+ G EP EL G+ E+P++E+E DD+E + + R
Sbjct: 1406 AINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEKEPEVDYR 1450
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 30.0 bits (66), Expect = 0.67
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 4 AVAAAGAGEPQSPDELLPKGDA-EKPEEELEEDDDEELDETLSER 47
A+ G EP EL G+ E+P++E+E DD+E + + R
Sbjct: 1406 AINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEKEPEVDYR 1450
>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
Length = 1794
Score = 30.0 bits (66), Expect = 0.67
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 4 AVAAAGAGEPQSPDELLPKGDA-EKPEEELEEDDDEELDETLSER 47
A+ G EP EL G+ E+P++E+E DD+E + + R
Sbjct: 1337 AINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEKEPEVDYR 1381
>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
Length = 1845
Score = 30.0 bits (66), Expect = 0.67
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 4 AVAAAGAGEPQSPDELLPKGDA-EKPEEELEEDDDEELDETLSER 47
A+ G EP EL G+ E+P++E+E DD+E + + R
Sbjct: 1337 AINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEKEPEVDYR 1381
>gi|4505419 nucleolar protein 3 [Homo sapiens]
Length = 208
Score = 30.0 bits (66), Expect = 0.67
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 12 EPQSPDELLPKGDAEKPEEELEEDDDEELDETLSER 47
EP+ EL P+ +AE PE ELE + D E + ER
Sbjct: 168 EPEPEPELEPEAEAE-PEPELEPEPDPEPEPDFEER 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,007,145
Number of Sequences: 37866
Number of extensions: 268598
Number of successful extensions: 4906
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 3219
Number of HSP's gapped (non-prelim): 1224
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.