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Search of human proteins with 95007022
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|95007022 tescalcin [Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|95007022 tescalcin [Homo sapiens] 538 e-153
gi|6005731 calcium binding protein P22 [Homo sapiens] 115 4e-26
gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo sapi... 80 1e-15
gi|4506025 protein phosphatase 3, regulatory subunit B, alpha is... 72 7e-13
gi|22212896 protein phosphatase 3 regulatory subunit B, beta iso... 59 3e-09
gi|163644313 calcium and integrin binding 1 [Homo sapiens] 47 1e-05
gi|78190478 Kv channel interacting protein 1 isoform 3 [Homo sap... 41 0.001
gi|78190480 Kv channel interacting protein 1 isoform 1 [Homo sap... 41 0.001
gi|7657247 Kv channel interacting protein 1 isoform 2 [Homo sapi... 41 0.001
gi|71274156 calcium and integrin binding family member 4 [Homo s... 40 0.002
gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo sap... 39 0.004
gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo sap... 39 0.004
gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo sap... 39 0.004
gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo sap... 39 0.004
gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo sap... 39 0.004
gi|21624641 calcium binding protein 4 [Homo sapiens] 38 0.008
gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo sap... 37 0.014
gi|78190488 Kv channel interacting protein 4 isoform 3 [Homo sap... 37 0.024
gi|78190486 Kv channel interacting protein 4 isoform 5 [Homo sap... 37 0.024
gi|22212902 Kv channel interacting protein 4 isoform 4 [Homo sap... 37 0.024
gi|22212900 Kv channel interacting protein 4 isoform 3 [Homo sap... 37 0.024
gi|22212898 Kv channel interacting protein 4 isoform 2 [Homo sap... 37 0.024
gi|24586671 Kv channel interacting protein 4 isoform 1 [Homo sap... 37 0.024
gi|17738308 frequenin homolog isoform 1 [Homo sapiens] 36 0.031
gi|4757902 caltractin [Homo sapiens] 36 0.040
gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens] 36 0.040
gi|78190495 Kv channel interacting protein 3 isoform 2 [Homo sap... 36 0.040
gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo sapi... 36 0.040
gi|16930817 DNA-dependent protein kinase catalytic subunit-inter... 36 0.040
gi|169207282 PREDICTED: hypothetical protein [Homo sapiens] 35 0.052
>gi|95007022 tescalcin [Homo sapiens]
Length = 267
Score = 538 bits (1386), Expect = e-153
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MRPRSGPTRNPRLRAFAGVPTRGRTRGQSRRCAAEASAGPERDARPGAPAAGTMGAAHSA 60
MRPRSGPTRNPRLRAFAGVPTRGRTRGQSRRCAAEASAGPERDARPGAPAAGTMGAAHSA
Sbjct: 1 MRPRSGPTRNPRLRAFAGVPTRGRTRGQSRRCAAEASAGPERDARPGAPAAGTMGAAHSA 60
Query: 61 SEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNVPDLELNPIRSKIVRAFF 120
SEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNVPDLELNPIRSKIVRAFF
Sbjct: 61 SEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNVPDLELNPIRSKIVRAFF 120
Query: 121 DNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSD 180
DNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSD
Sbjct: 121 DNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSD 180
Query: 181 GRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEGITFEDF 240
GRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEGITFEDF
Sbjct: 181 GRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEGITFEDF 240
Query: 241 LKIWQGIDIETKMHVRFLNMETMALCH 267
LKIWQGIDIETKMHVRFLNMETMALCH
Sbjct: 241 LKIWQGIDIETKMHVRFLNMETMALCH 267
>gi|6005731 calcium binding protein P22 [Homo sapiens]
Length = 195
Score = 115 bits (288), Expect = 4e-26
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 26/214 (12%)
Query: 52 GTMGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLS-GDQPTIRKENFNNVPDLELNP 110
G+ + EE+ E++ +TGFS QI +L+ RF L G+ T+ +E+F +P+L +NP
Sbjct: 2 GSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINP 61
Query: 111 IRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVE-----LSRK 165
+ +I+ AFF P G D++NF F+ +++FRPI+ + V SR
Sbjct: 62 LGDRIINAFF--------PEG-EDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRS 112
Query: 166 EKLRFLFHMYDSDSDGRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQ 225
KL F F +YD D D +I+ +E V+ ++ N I E SIAD + EA
Sbjct: 113 NKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVN--ISDEQLGSIADRTIQEA------D 164
Query: 226 MEPDQVYEGITFEDFLKIWQGIDIETKMHVRFLN 259
+ D I+F +F+K+ + +D+E KM +RFL+
Sbjct: 165 QDGD---SAISFTEFVKVLEKVDVEQKMSIRFLH 195
>gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo
sapiens]
Length = 196
Score = 80.5 bits (197), Expect = 1e-15
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 29/197 (14%)
Query: 70 KTGFSSDQIEQLHRRFKQLSGDQPT-IRKENFNNVPDLELNPIRSKIVRAFFDNRNLRKG 128
+TGFS + +LH RF+ L ++ + + + + L +NP+ +I+ +FF
Sbjct: 20 ETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFF-------- 71
Query: 129 PSGLADEINFEDFLTIMSYFRPIDT----TMDEEQVEL--SRKEKLRFLFHMYDSDSDGR 182
P G + ++F F+ ++++FRP++ T D ++ E SR+ KL + F +YD D DG+
Sbjct: 72 PDG-SQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGK 130
Query: 183 ITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEG-ITFEDFL 241
I+ E V+ L + +E +IAD + EA D+ +G ++F +F
Sbjct: 131 ISRHEMLQVLR--LMVGVQVTEEQLENIADRTVQEA----------DEDGDGAVSFVEFT 178
Query: 242 KIWQGIDIETKMHVRFL 258
K + +D+E KM +R L
Sbjct: 179 KSLEKMDVEQKMSIRIL 195
>gi|4506025 protein phosphatase 3, regulatory subunit B, alpha
isoform 1 [Homo sapiens]
Length = 170
Score = 71.6 bits (174), Expect = 7e-13
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 31/190 (16%)
Query: 67 LEGKTGFSSDQIEQLHRRFKQLSGDQP-TIRKENFNNVPDLELNPIRSKIVRAFFDNRNL 125
LE + F +D+I++L +RFK+L D ++ E F ++P+L+ NP+ +++ F + N
Sbjct: 9 LEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGN- 67
Query: 126 RKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITL 185
E++F++F+ +S F V+ +++KLRF F +YD D DG I+
Sbjct: 68 --------GEVDFKEFIEGVSQF----------SVKGDKEQKLRFAFRIYDMDKDGYISN 109
Query: 186 EEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEGITFEDFLKIWQ 245
E V++ ++ N ++ + I D ++ A G+ I+FE+F +
Sbjct: 110 GELFQVLKMMVGNN--LKDTQLQQIVDKTIINADKDGDGR---------ISFEEFCAVVG 158
Query: 246 GIDIETKMHV 255
G+DI KM V
Sbjct: 159 GLDIHKKMVV 168
>gi|22212896 protein phosphatase 3 regulatory subunit B, beta
isoform [Homo sapiens]
Length = 173
Score = 59.3 bits (142), Expect = 3e-09
Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 73 FSSDQIEQLHRRFKQLSGDQP-TIRKENFNNVPDLELNPIRSKIVRAFFDNRNLRKGPSG 131
F +D+I++L RRFK+L D+ ++ E F ++P+L NP+ +++ F + +
Sbjct: 18 FDNDEIKRLGRRFKKLDLDKSGSLSVEEFMSLPELRHNPLVRRVIDVFDTDGD------- 70
Query: 132 LADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEYRNV 191
E++F++F+ S F DEEQ KLRF F +YD D DG I+ E V
Sbjct: 71 --GEVDFKEFILGTSQF---SVKGDEEQ-------KLRFAFSIYDMDKDGYISNGELFQV 118
Query: 192 VEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEGITFEDFLKIWQGIDIET 251
++ ++ N + D + + + ++ D + I+FE+F + + ++I
Sbjct: 119 LKMMVGNN----------LTDWQLQQLVDKTIIILDKDGDGK-ISFEEFSAVVRDLEIHK 167
Query: 252 KM 253
K+
Sbjct: 168 KL 169
>gi|163644313 calcium and integrin binding 1 [Homo sapiens]
Length = 191
Score = 47.4 bits (111), Expect = 1e-05
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 54 MGAAHS--ASEEVRELEGKTGFSSDQIEQLHRRFKQL---------SGDQPTIRKENFNN 102
MG + S + E + E + T + +I HRRF +L S + + E +
Sbjct: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
Query: 103 VPDLELNPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVEL 162
+P+L+ NP + +I R F S D ++FEDFL ++S F DT +
Sbjct: 61 LPELKANPFKERICRVF--------STSPAKDSLSFEDFLDLLSVFS--DTATPD----- 105
Query: 163 SRKEKLRFLFHMYDSDSDGRITLEEYRNVV 192
K + F ++D D DG + E+ +V
Sbjct: 106 ---IKSHYAFRIFDFDDDGTLNREDLSRLV 132
>gi|78190478 Kv channel interacting protein 1 isoform 3 [Homo
sapiens]
Length = 225
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +LE +T F+ +++ L+R FK + ++ F + P + + +
Sbjct: 46 EGLEQLEAQTNFTKRELQVLYRGFKN-ECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLF 104
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF + + FEDF+T +S + + EKLR+ F++YD
Sbjct: 105 NAFDTTQT---------GSVKFEDFVTALSIL-----------LRGTVHEKLRWTFNLYD 144
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG I EE ++V+ +
Sbjct: 145 INKDGYINKEEMMDIVKAI 163
>gi|78190480 Kv channel interacting protein 1 isoform 1 [Homo
sapiens]
Length = 227
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +LE +T F+ +++ L+R FK + ++ F + P + + +
Sbjct: 48 EGLEQLEAQTNFTKRELQVLYRGFKN-ECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLF 106
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF + + FEDF+T +S + + EKLR+ F++YD
Sbjct: 107 NAFDTTQT---------GSVKFEDFVTALSIL-----------LRGTVHEKLRWTFNLYD 146
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG I EE ++V+ +
Sbjct: 147 INKDGYINKEEMMDIVKAI 165
>gi|7657247 Kv channel interacting protein 1 isoform 2 [Homo
sapiens]
Length = 216
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +LE +T F+ +++ L+R FK + ++ F + P + + +
Sbjct: 37 EGLEQLEAQTNFTKRELQVLYRGFKN-ECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLF 95
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF + + FEDF+T +S + + EKLR+ F++YD
Sbjct: 96 NAFDTTQT---------GSVKFEDFVTALSIL-----------LRGTVHEKLRWTFNLYD 135
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG I EE ++V+ +
Sbjct: 136 INKDGYINKEEMMDIVKAI 154
>gi|71274156 calcium and integrin binding family member 4 [Homo
sapiens]
Length = 185
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 26/143 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGD-----QPTIRKENFNNVPDLELNPIRSKIV 116
E++ E + T + ++I +H F +L + T+ + +++P L +NP R +I
Sbjct: 12 EDLEEYQALTFLTRNEILCIHDTFLKLCPPGKYYKEATLTMDQVSSLPALRVNPFRDRIC 71
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
R F KG +FED L + S F EQ S K+ + F +YD
Sbjct: 72 RVF-----SHKG------MFSFEDVLGMASVF--------SEQACPSL--KIEYAFRIYD 110
Query: 177 SDSDGRITLEEYRNVVEELLSGN 199
+ +G I E+ + ++ LL+ +
Sbjct: 111 FNENGFIDEEDLQRIILRLLNSD 133
>gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo
sapiens]
Length = 225
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +L+ +T F+ +++ L+R FK + +ENF + P + + + +
Sbjct: 46 EGLEQLQEQTKFTRKELQVLYRGFKN-ECPSGIVNEENFKQIYSQFFPQGDSSTYATFLF 104
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF N + ++FEDF+ +S + T+D+ +L + F++YD
Sbjct: 105 NAFDTNHD---------GSVSFEDFVAGLSVI--LRGTVDD---------RLNWAFNLYD 144
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG IT EE ++++ +
Sbjct: 145 LNKDGCITKEEMLDIMKSI 163
Score = 28.1 bits (61), Expect = 8.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E NF+ I S F P + FLF+ +D++ DG ++ E++
Sbjct: 74 PSGIVNEENFKQ---IYSQFFP----------QGDSSTYATFLFNAFDTNHDGSVSFEDF 120
Query: 189 RNVVEELLSG 198
+ +L G
Sbjct: 121 VAGLSVILRG 130
>gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo
sapiens]
Length = 220
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +L+ +T F+ +++ L+R FK + +ENF + P + + + +
Sbjct: 41 EGLEQLQEQTKFTRKELQVLYRGFKN-ECPSGIVNEENFKQIYSQFFPQGDSSTYATFLF 99
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF N + ++FEDF+ +S + T+D+ +L + F++YD
Sbjct: 100 NAFDTNHD---------GSVSFEDFVAGLSVI--LRGTVDD---------RLNWAFNLYD 139
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG IT EE ++++ +
Sbjct: 140 LNKDGCITKEEMLDIMKSI 158
Score = 28.1 bits (61), Expect = 8.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E NF+ I S F P + FLF+ +D++ DG ++ E++
Sbjct: 69 PSGIVNEENFKQ---IYSQFFP----------QGDSSTYATFLFNAFDTNHDGSVSFEDF 115
Query: 189 RNVVEELLSG 198
+ +L G
Sbjct: 116 VAGLSVILRG 125
>gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo
sapiens]
Length = 252
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +L+ +T F+ +++ L+R FK + +ENF + P + + + +
Sbjct: 73 EGLEQLQEQTKFTRKELQVLYRGFKN-ECPSGIVNEENFKQIYSQFFPQGDSSTYATFLF 131
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF N + ++FEDF+ +S + T+D+ +L + F++YD
Sbjct: 132 NAFDTNHD---------GSVSFEDFVAGLSVI--LRGTVDD---------RLNWAFNLYD 171
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG IT EE ++++ +
Sbjct: 172 LNKDGCITKEEMLDIMKSI 190
Score = 28.1 bits (61), Expect = 8.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E NF+ I S F P + FLF+ +D++ DG ++ E++
Sbjct: 101 PSGIVNEENFKQ---IYSQFFP----------QGDSSTYATFLFNAFDTNHDGSVSFEDF 147
Query: 189 RNVVEELLSG 198
+ +L G
Sbjct: 148 VAGLSVILRG 157
>gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo
sapiens]
Length = 285
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +L+ +T F+ +++ L+R FK + +ENF + P + + + +
Sbjct: 106 EGLEQLQEQTKFTRKELQVLYRGFKN-ECPSGIVNEENFKQIYSQFFPQGDSSTYATFLF 164
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF N + ++FEDF+ +S + T+D+ +L + F++YD
Sbjct: 165 NAFDTNHD---------GSVSFEDFVAGLSVI--LRGTVDD---------RLNWAFNLYD 204
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG IT EE ++++ +
Sbjct: 205 LNKDGCITKEEMLDIMKSI 223
Score = 28.1 bits (61), Expect = 8.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E NF+ I S F P + FLF+ +D++ DG ++ E++
Sbjct: 134 PSGIVNEENFKQ---IYSQFFP----------QGDSSTYATFLFNAFDTNHDGSVSFEDF 180
Query: 189 RNVVEELLSG 198
+ +L G
Sbjct: 181 VAGLSVILRG 190
>gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo
sapiens]
Length = 270
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 26/139 (18%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLELNPIRSKIV 116
E + +L+ +T F+ +++ L+R FK + +ENF + P + + + +
Sbjct: 91 EGLEQLQEQTKFTRKELQVLYRGFKN-ECPSGIVNEENFKQIYSQFFPQGDSSTYATFLF 149
Query: 117 RAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYD 176
AF N + ++FEDF+ +S + T+D+ +L + F++YD
Sbjct: 150 NAFDTNHD---------GSVSFEDFVAGLSVI--LRGTVDD---------RLNWAFNLYD 189
Query: 177 SDSDGRITLEEYRNVVEEL 195
+ DG IT EE ++++ +
Sbjct: 190 LNKDGCITKEEMLDIMKSI 208
Score = 28.1 bits (61), Expect = 8.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E NF+ I S F P + FLF+ +D++ DG ++ E++
Sbjct: 119 PSGIVNEENFKQ---IYSQFFP----------QGDSSTYATFLFNAFDTNHDGSVSFEDF 165
Query: 189 RNVVEELLSG 198
+ +L G
Sbjct: 166 VAGLSVILRG 175
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 38.1 bits (87), Expect = 0.008
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 132 LADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEYRNV 191
+ ++FE+F+ + I + EE + +LR F +D D DGRIT+ E R
Sbjct: 181 MGGRVDFEEFVEL------IGPKLREETAHMLGVRELRIAFREFDRDRDGRITVAELREA 234
Query: 192 VEELLSGNP 200
V LL G P
Sbjct: 235 VPALL-GEP 242
>gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo
sapiens]
Length = 227
Score = 37.4 bits (85), Expect = 0.014
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 31/145 (21%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSG------DQPTIRKENFNNV-----PDLELNP 110
E + +L+ +T F+ +++ L+R FK + +ENF + P + +
Sbjct: 41 EGLEQLQEQTKFTRKELQVLYRGFKNPGALSFQECPSGIVNEENFKQIYSQFFPQGDSST 100
Query: 111 IRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRF 170
+ + AF N + ++FEDF+ +S + T+D+ +L +
Sbjct: 101 YATFLFNAFDTNHD---------GSVSFEDFVAGLSVI--LRGTVDD---------RLNW 140
Query: 171 LFHMYDSDSDGRITLEEYRNVVEEL 195
F++YD + DG IT EE ++++ +
Sbjct: 141 AFNLYDLNKDGCITKEEMLDIMKSI 165
Score = 28.1 bits (61), Expect = 8.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E NF+ I S F P + FLF+ +D++ DG ++ E++
Sbjct: 76 PSGIVNEENFKQ---IYSQFFP----------QGDSSTYATFLFNAFDTNHDGSVSFEDF 122
Query: 189 RNVVEELLSG 198
+ +L G
Sbjct: 123 VAGLSVILRG 132
>gi|78190488 Kv channel interacting protein 4 isoform 3 [Homo
sapiens]
Length = 188
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 54 MGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLEL 108
M E + LE ++ F+ +++ L+R FK + +E F + P +
Sbjct: 1 MATVRHRPEALELLEAQSKFTKKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDS 59
Query: 109 NPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKL 168
+ AF + N ++FEDF+ +S + + +EKL
Sbjct: 60 TTYAHFLFNAFDTDHN---------GAVSFEDFIKGLSIL-----------LRGTVQEKL 99
Query: 169 RFLFHMYDSDSDGRITLEEYRNVVEEL 195
+ F++YD + DG IT EE ++++ +
Sbjct: 100 NWAFNLYDINKDGYITKEEMLDIMKAI 126
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E F++ + +F D+T FLF+ +D+D +G ++ E++
Sbjct: 37 PSGVVNEETFKEIYS--QFFPQGDSTT-----------YAHFLFNAFDTDHNGAVSFEDF 83
Query: 189 RNVVEELLSG 198
+ LL G
Sbjct: 84 IKGLSILLRG 93
>gi|78190486 Kv channel interacting protein 4 isoform 5 [Homo
sapiens]
Length = 225
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 54 MGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLEL 108
M E + LE ++ F+ +++ L+R FK + +E F + P +
Sbjct: 38 MATVRHRPEALELLEAQSKFTKKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDS 96
Query: 109 NPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKL 168
+ AF + N ++FEDF+ +S + + +EKL
Sbjct: 97 TTYAHFLFNAFDTDHN---------GAVSFEDFIKGLSIL-----------LRGTVQEKL 136
Query: 169 RFLFHMYDSDSDGRITLEEYRNVVEEL 195
+ F++YD + DG IT EE ++++ +
Sbjct: 137 NWAFNLYDINKDGYITKEEMLDIMKAI 163
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E F++ + +F D+T FLF+ +D+D +G ++ E++
Sbjct: 74 PSGVVNEETFKEIYS--QFFPQGDSTT-----------YAHFLFNAFDTDHNGAVSFEDF 120
Query: 189 RNVVEELLSG 198
+ LL G
Sbjct: 121 IKGLSILLRG 130
>gi|22212902 Kv channel interacting protein 4 isoform 4 [Homo
sapiens]
Length = 229
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 54 MGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLEL 108
M E + LE ++ F+ +++ L+R FK + +E F + P +
Sbjct: 42 MATVRHRPEALELLEAQSKFTKKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDS 100
Query: 109 NPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKL 168
+ AF + N ++FEDF+ +S + + +EKL
Sbjct: 101 TTYAHFLFNAFDTDHN---------GAVSFEDFIKGLSIL-----------LRGTVQEKL 140
Query: 169 RFLFHMYDSDSDGRITLEEYRNVVEEL 195
+ F++YD + DG IT EE ++++ +
Sbjct: 141 NWAFNLYDINKDGYITKEEMLDIMKAI 167
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E F++ + +F D+T FLF+ +D+D +G ++ E++
Sbjct: 78 PSGVVNEETFKEIYS--QFFPQGDSTT-----------YAHFLFNAFDTDHNGAVSFEDF 124
Query: 189 RNVVEELLSG 198
+ LL G
Sbjct: 125 IKGLSILLRG 134
>gi|22212900 Kv channel interacting protein 4 isoform 3 [Homo
sapiens]
Length = 188
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 54 MGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLEL 108
M E + LE ++ F+ +++ L+R FK + +E F + P +
Sbjct: 1 MATVRHRPEALELLEAQSKFTKKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDS 59
Query: 109 NPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKL 168
+ AF + N ++FEDF+ +S + + +EKL
Sbjct: 60 TTYAHFLFNAFDTDHN---------GAVSFEDFIKGLSIL-----------LRGTVQEKL 99
Query: 169 RFLFHMYDSDSDGRITLEEYRNVVEEL 195
+ F++YD + DG IT EE ++++ +
Sbjct: 100 NWAFNLYDINKDGYITKEEMLDIMKAI 126
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E F++ + +F D+T FLF+ +D+D +G ++ E++
Sbjct: 37 PSGVVNEETFKEIYS--QFFPQGDSTT-----------YAHFLFNAFDTDHNGAVSFEDF 83
Query: 189 RNVVEELLSG 198
+ LL G
Sbjct: 84 IKGLSILLRG 93
>gi|22212898 Kv channel interacting protein 4 isoform 2 [Homo
sapiens]
Length = 216
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 54 MGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLEL 108
M E + LE ++ F+ +++ L+R FK + +E F + P +
Sbjct: 29 MATVRHRPEALELLEAQSKFTKKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDS 87
Query: 109 NPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKL 168
+ AF + N ++FEDF+ +S + + +EKL
Sbjct: 88 TTYAHFLFNAFDTDHN---------GAVSFEDFIKGLSIL-----------LRGTVQEKL 127
Query: 169 RFLFHMYDSDSDGRITLEEYRNVVEEL 195
+ F++YD + DG IT EE ++++ +
Sbjct: 128 NWAFNLYDINKDGYITKEEMLDIMKAI 154
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E F++ + +F D+T FLF+ +D+D +G ++ E++
Sbjct: 65 PSGVVNEETFKEIYS--QFFPQGDSTT-----------YAHFLFNAFDTDHNGAVSFEDF 111
Query: 189 RNVVEELLSG 198
+ LL G
Sbjct: 112 IKGLSILLRG 121
>gi|24586671 Kv channel interacting protein 4 isoform 1 [Homo
sapiens]
Length = 250
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 54 MGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRKENFNNV-----PDLEL 108
M E + LE ++ F+ +++ L+R FK + +E F + P +
Sbjct: 63 MATVRHRPEALELLEAQSKFTKKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDS 121
Query: 109 NPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKL 168
+ AF + N ++FEDF+ +S + + +EKL
Sbjct: 122 TTYAHFLFNAFDTDHN---------GAVSFEDFIKGLSIL-----------LRGTVQEKL 161
Query: 169 RFLFHMYDSDSDGRITLEEYRNVVEEL 195
+ F++YD + DG IT EE ++++ +
Sbjct: 162 NWAFNLYDINKDGYITKEEMLDIMKAI 188
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 129 PSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEY 188
PSG+ +E F++ + +F D+T FLF+ +D+D +G ++ E++
Sbjct: 99 PSGVVNEETFKEIYS--QFFPQGDSTT-----------YAHFLFNAFDTDHNGAVSFEDF 145
Query: 189 RNVVEELLSG 198
+ LL G
Sbjct: 146 IKGLSILLRG 155
>gi|17738308 frequenin homolog isoform 1 [Homo sapiens]
Length = 190
Score = 36.2 bits (82), Expect = 0.031
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 54 MGAAHSA--SEEVRELEGKTGFSSDQIEQLHRRFKQ--LSG--DQPTIRKENFNNVPDLE 107
MG ++S E V EL KT F+ +++Q ++ F + SG D +K P +
Sbjct: 1 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD 60
Query: 108 LNPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEK 167
+ + F +N++ R I F +F+ +S T+DE K
Sbjct: 61 PTKFATFVFNVFDENKDGR---------IEFSEFIQALSVTSR--GTLDE---------K 100
Query: 168 LRFLFHMYDSDSDGRITLEEYRNVVEEL 195
LR+ F +YD D+DG IT E ++V+ +
Sbjct: 101 LRWAFKLYDLDNDGYITRNEMLDIVDAI 128
Score = 28.9 bits (63), Expect = 4.9
Identities = 10/42 (23%), Positives = 29/42 (69%)
Query: 148 FRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEYR 189
++ + T++ + E + ++++ +F M D ++DG++TL+E++
Sbjct: 129 YQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 35.8 bits (81), Expect = 0.040
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 10/61 (16%)
Query: 135 EINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEYRNVVEE 194
++NF DFLT+M+ ++ E KE++ F ++D D G+I+ + + V +E
Sbjct: 83 KMNFGDFLTVMT----------QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKE 132
Query: 195 L 195
L
Sbjct: 133 L 133
>gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens]
Length = 201
Score = 35.8 bits (81), Expect = 0.040
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 117 RAFFDNRNLRKGPSGLADEI------NFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRF 170
R FF +NL S +++ N + ++ M Y + + + +VE +KLR+
Sbjct: 40 RQFFGLKNLSPSASQYVEQMFETFDFNKDGYIDFMEYVAALSLVL-KGKVE----QKLRW 94
Query: 171 LFHMYDSDSDGRITLEEYRNVVEELLSGNPHIEKE-SARSIADGAMMEAASVCMGQMEPD 229
F +YD D +G I +E +++ + + NP + +A D + G++ +
Sbjct: 95 YFKLYDVDGNGCIDRDELLTIIQAIRAINPCSDTTMTAEEFTDTVFSKIDVNGDGELSLE 154
Query: 230 QVYEGITFEDFL 241
+ EG+ + L
Sbjct: 155 EFIEGVQKDQML 166
>gi|78190495 Kv channel interacting protein 3 isoform 2 [Homo
sapiens]
Length = 230
Score = 35.8 bits (81), Expect = 0.040
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSG----DQPTIRKENFNNVPDLELNPIRSKIVR 117
E + +L+ +T F+ +++ L+R FK D+ T + P + +
Sbjct: 51 EGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFN 110
Query: 118 AFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDS 177
AF + N I+FEDF+ +S + + EKL++ F++YD
Sbjct: 111 AFDADGN---------GAIHFEDFVVGLSIL-----------LRGTVHEKLKWAFNLYDI 150
Query: 178 DSDGRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEG-IT 236
+ DG IT EE +++ + + + + + + A E +M+ +Q +G +T
Sbjct: 151 NKDGYITKEEMLAIMKSIYD---MMGRHTYPILREDAPAEHVERFFEKMDRNQ--DGVVT 205
Query: 237 FEDFLKIWQ 245
E+FL+ Q
Sbjct: 206 IEEFLEACQ 214
>gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo
sapiens]
Length = 256
Score = 35.8 bits (81), Expect = 0.040
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSG----DQPTIRKENFNNVPDLELNPIRSKIVR 117
E + +L+ +T F+ +++ L+R FK D+ T + P + +
Sbjct: 77 EGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFN 136
Query: 118 AFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDS 177
AF + N I+FEDF+ +S + + EKL++ F++YD
Sbjct: 137 AFDADGN---------GAIHFEDFVVGLSIL-----------LRGTVHEKLKWAFNLYDI 176
Query: 178 DSDGRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEG-IT 236
+ DG IT EE +++ + + + + + + A E +M+ +Q +G +T
Sbjct: 177 NKDGYITKEEMLAIMKSIYD---MMGRHTYPILREDAPAEHVERFFEKMDRNQ--DGVVT 231
Query: 237 FEDFLKIWQ 245
E+FL+ Q
Sbjct: 232 IEEFLEACQ 240
>gi|16930817 DNA-dependent protein kinase catalytic
subunit-interacting protein 3 [Homo sapiens]
Length = 187
Score = 35.8 bits (81), Expect = 0.040
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 45/208 (21%)
Query: 62 EEVRELEGKTGFSSDQIEQLHRRFKQLSG-----DQPT-----IRKENFNNVPDLELNPI 111
E++ + T F+ +I +L R++ L+ D T + E ++P+L+ NP
Sbjct: 11 EQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPF 70
Query: 112 RSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFL 171
R +I + F ++ + G NF D ++MS P D K +
Sbjct: 71 RQRIAQVFSEDGD------GHMTLDNFLDMFSVMSEMAPRDL-------------KAYYA 111
Query: 172 FHMYDSDSDGRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQM-EPDQ 230
F +YD ++D I + V +L G E E + VC + E D
Sbjct: 112 FKIYDFNNDDYICAWDLEQTVTKLTRGGLSAE-------------EVSLVCEKVLDEADG 158
Query: 231 VYEG-ITFEDFLK-IWQGIDIETKMHVR 256
++G ++ EDF I + D + H+R
Sbjct: 159 DHDGRLSLEDFQNMILRAPDFLSTFHIR 186
>gi|169207282 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 35.4 bits (80), Expect = 0.052
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 4 RSGPTRNPRLRAFAGVPTRGRTRGQSRRCAAEASAGPERDARP 46
R GP R PR A GVP+RGR G +RR ++A G E+ A P
Sbjct: 55 RHGPRRAPRPPA-PGVPSRGRGSGDARR-GSQAQGGKEKGAGP 95
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,214,307
Number of Sequences: 37866
Number of extensions: 460729
Number of successful extensions: 2600
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 2409
Number of HSP's gapped (non-prelim): 215
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.