Guide to the Human Genome
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Name: KCNIP4 Sequence: fasta or formatted (229aa) NCBI GI: 22212902
Description:

Kv channel interacting protein 4 isoform 4

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [216aa] Kv channel interacting protein 4 isoform 2
alt prot [188aa] Kv channel interacting protein 4 isoform 3
alt prot [250aa] Kv channel interacting protein 4 isoform 1
alt prot [225aa] Kv channel interacting protein 4 isoform 5
alt prot [188aa] Kv channel interacting protein 4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         11           1
 C cysteine            1.3          3           1
 D aspartate           6.6         15           1
 E glutamate          11.4         26           2
 F phenylalanine       7.4         17           2
 G glycine             5.2         12           1
 H histidine           1.7          4           1
 I isoleucine          7.0         16           1
 K lysine              7.4         17           2
 L leucine            10.0         23           2
 M methionine          4.4         10           2
 N asparagine          4.8         11           1
 P proline             2.2          5           1
 Q glutamine           4.4         10           1
 R arginine            2.6          6           1
 S serine              3.9          9           1
 T threonine           4.8         11           2
 V valine              6.6         15           2
 W tryptophan          0.4          1           1
 Y tyrosine            3.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kv channel interacting protein 4 isoform 4 
KCNIP4                0.864   Kv channel interacting protein 4 isoform 5 
KCNIP4                0.864   Kv channel interacting protein 4 isoform 2 
KCNIP4                0.862   Kv channel interacting protein 4 isoform 1 
KCNIP4                0.829   Kv channel interacting protein 4 isoform 3 
KCNIP4                0.829   Kv channel interacting protein 4 isoform 3 
KCNIP3                0.765   Kv channel interacting protein 3 isoform 2 
KCNIP2                0.728   Kv channel interacting protein 2 isoform 6 
KCNIP2                0.728   Kv channel interacting protein 2 isoform 3 
KCNIP2                0.726   Kv channel interacting protein 2 isoform 5 
KCNIP2                0.726   Kv channel interacting protein 2 isoform 1 
KCNIP2                0.726   Kv channel interacting protein 2 isoform 2 
KCNIP2                0.712   Kv channel interacting protein 2 isoform 4 
KCNIP1                0.707   Kv channel interacting protein 1 isoform 3 
KCNIP1                0.705   Kv channel interacting protein 1 isoform 2 
KCNIP1                0.703   Kv channel interacting protein 1 isoform 1 
KCNIP3                0.696   Kv channel interacting protein 3 isoform 1 
KCNIP2                0.484   Kv channel interacting protein 2 isoform 7 
FREQ                  0.355   frequenin homolog isoform 1 
FREQ                  0.334   frequenin homolog isoform 2 
VSNL1                 0.325   visinin-like 1 
HPCA                  0.325   hippocalcin 
HPCAL4                0.313   hippocalcin-like protein 4 
NCALD                 0.311   neurocalcin delta 
NCALD                 0.311   neurocalcin delta 
NCALD                 0.311   neurocalcin delta 
NCALD                 0.311   neurocalcin delta 
NCALD                 0.311   neurocalcin delta 
NCALD                 0.311   neurocalcin delta 
NCALD                 0.311   neurocalcin delta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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