Guide to the Human Genome
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Name: PYGB Sequence: fasta or formatted (843aa) NCBI GI: 21361370
Description:

brain glycogen phosphorylase

Referenced in:

Additional Brain Proteins
Glycogen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         60           2
 C cysteine            1.4         12           1
 D aspartate           6.5         55           2
 E glutamate           7.2         61           2
 F phenylalanine       4.6         39           2
 G glycine             5.7         48           2
 H histidine           2.7         23           2
 I isoleucine          5.7         48           2
 K lysine              6.6         56           2
 L leucine             9.5         80           3
 M methionine          2.5         21           1
 N asparagine          4.9         41           2
 P proline             4.6         39           3
 Q glutamine           3.3         28           2
 R arginine            6.3         53           2
 S serine              3.8         32           2
 T threonine           4.3         36           1
 V valine              7.8         66           2
 W tryptophan          1.4         12           1
 Y tyrosine            3.9         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   brain glycogen phosphorylase 
PYGM                  0.863   muscle glycogen phosphorylase 
PYGL                  0.836   liver glycogen phosphorylase 
SARM1                 0.005   sterile alpha and TIR motif containing 1 
UGCGL2                0.004   UDP-glucose ceramide glucosyltransferase-like 2 [Ho...
PEPD                  0.004   peptidase D 
RICTOR                0.004   rapamycin-insensitive companion of mTOR 
CNNM4                 0.004   cyclin M4 
IL7                   0.003   interleukin 7 precursor 
RASGRF2               0.003   Ras protein-specific guanine nucleotide-releasing fa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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