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Search of human proteins with 94400932
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|94400932 syntaxin 5 [Homo sapiens]
(355 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|94400932 syntaxin 5 [Homo sapiens] 681 0.0
gi|239750049 PREDICTED: hypothetical protein XP_002347265 [Homo ... 154 9e-38
gi|47778943 syntaxin 16 isoform a [Homo sapiens] 60 3e-09
gi|198041692 syntaxin 16 isoform d [Homo sapiens] 60 3e-09
gi|198041688 syntaxin 16 isoform c [Homo sapiens] 60 3e-09
gi|34447229 syntaxin 16 isoform b [Homo sapiens] 60 3e-09
gi|37577162 syntaxin 2 isoform 2 [Homo sapiens] 53 5e-07
gi|37577287 syntaxin 2 isoform 1 [Homo sapiens] 52 1e-06
gi|50083279 centrosome protein 4 [Homo sapiens] 48 1e-05
gi|4759184 syntaxin 3 [Homo sapiens] 48 2e-05
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 45 1e-04
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 40 0.004
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 39 0.007
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 39 0.007
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 39 0.007
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 39 0.007
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 39 0.009
gi|20149560 syntaxin 4 [Homo sapiens] 39 0.009
gi|8394376 syntaxin 18 [Homo sapiens] 39 0.009
gi|71061468 centromere protein E [Homo sapiens] 37 0.027
gi|49258196 syntaxin 19 [Homo sapiens] 37 0.027
gi|63054866 leucine rich repeat containing 16A [Homo sapiens] 36 0.046
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 36 0.046
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 36 0.046
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 36 0.046
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 36 0.046
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 35 0.078
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 35 0.078
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 35 0.13
gi|146260271 hypothetical protein LOC129881 [Homo sapiens] 35 0.13
>gi|94400932 syntaxin 5 [Homo sapiens]
Length = 355
Score = 681 bits (1756), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVTLVPPPPDTMSCRDR 60
MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVTLVPPPPDTMSCRDR
Sbjct: 1 MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVTLVPPPPDTMSCRDR 60
Query: 61 TQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAK 120
TQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAK
Sbjct: 61 TQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAK 120
Query: 121 RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ 180
RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ
Sbjct: 121 RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ 180
Query: 181 SKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHAS 240
SKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHAS
Sbjct: 181 SKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHAS 240
Query: 241 KDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET 300
KDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET
Sbjct: 241 KDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET 300
Query: 301 IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA
Sbjct: 301 IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
>gi|239750049 PREDICTED: hypothetical protein XP_002347265 [Homo
sapiens]
Length = 85
Score = 154 bits (390), Expect = 9e-38
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVTLVPPPPDTMSCRDR 60
MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVTLVPPPPDTMSCRDR
Sbjct: 1 MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVTLVPPPPDTMSCRDR 60
Query: 61 TQEFLSACKSLQTRQ 75
TQEFLSACKSLQTRQ
Sbjct: 61 TQEFLSACKSLQTRQ 75
>gi|47778943 syntaxin 16 isoform a [Homo sapiens]
Length = 325
Score = 60.1 bits (144), Expect = 3e-09
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 29/255 (11%)
Query: 104 DLSNTFAKLEKLTILAKR---KSLFDDKAVE---IEELTYIIKQDINSLNKQIAQLQDFV 157
D+ K+++L L + + DD + E IE T I Q + + + L
Sbjct: 88 DVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRA 147
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVS 217
RA Q GR L +V SL L +S F+ ++ LK+ ++R E+ +
Sbjct: 148 RACSEQEGRLL----GNVVASLAQALQELSTSFR---HAQSGYLKRMKNREERSQHFFDT 200
Query: 218 ALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIE 277
++PL + G T QL L+++ ++ R ++ I
Sbjct: 201 SVPLMDDGDDNTLYHRGF----------------TEDQLVLVEQNTLMVEEREREIRQIV 244
Query: 278 STIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMV 337
+I +L IF+ L M+ EQ + RID NV + + E ++ K Q NR ++V
Sbjct: 245 QSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLV 304
Query: 338 KIFLILIVFFIIFVV 352
+ L +I+ +I V+
Sbjct: 305 ILILFVIIIVLIVVL 319
>gi|198041692 syntaxin 16 isoform d [Homo sapiens]
Length = 308
Score = 60.1 bits (144), Expect = 3e-09
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 29/255 (11%)
Query: 104 DLSNTFAKLEKLTILAKR---KSLFDDKAVE---IEELTYIIKQDINSLNKQIAQLQDFV 157
D+ K+++L L + + DD + E IE T I Q + + + L
Sbjct: 71 DVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRA 130
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVS 217
RA Q GR L +V SL L +S F+ ++ LK+ ++R E+ +
Sbjct: 131 RACSEQEGRLL----GNVVASLAQALQELSTSFR---HAQSGYLKRMKNREERSQHFFDT 183
Query: 218 ALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIE 277
++PL + G T QL L+++ ++ R ++ I
Sbjct: 184 SVPLMDDGDDNTLYHRGF----------------TEDQLVLVEQNTLMVEEREREIRQIV 227
Query: 278 STIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMV 337
+I +L IF+ L M+ EQ + RID NV + + E ++ K Q NR ++V
Sbjct: 228 QSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLV 287
Query: 338 KIFLILIVFFIIFVV 352
+ L +I+ +I V+
Sbjct: 288 ILILFVIIIVLIVVL 302
>gi|198041688 syntaxin 16 isoform c [Homo sapiens]
Length = 321
Score = 60.1 bits (144), Expect = 3e-09
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 29/255 (11%)
Query: 104 DLSNTFAKLEKLTILAKR---KSLFDDKAVE---IEELTYIIKQDINSLNKQIAQLQDFV 157
D+ K+++L L + + DD + E IE T I Q + + + L
Sbjct: 84 DVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRA 143
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVS 217
RA Q GR L +V SL L +S F+ ++ LK+ ++R E+ +
Sbjct: 144 RACSEQEGRLL----GNVVASLAQALQELSTSFR---HAQSGYLKRMKNREERSQHFFDT 196
Query: 218 ALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIE 277
++PL + G T QL L+++ ++ R ++ I
Sbjct: 197 SVPLMDDGDDNTLYHRGF----------------TEDQLVLVEQNTLMVEEREREIRQIV 240
Query: 278 STIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMV 337
+I +L IF+ L M+ EQ + RID NV + + E ++ K Q NR ++V
Sbjct: 241 QSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLV 300
Query: 338 KIFLILIVFFIIFVV 352
+ L +I+ +I V+
Sbjct: 301 ILILFVIIIVLIVVL 315
>gi|34447229 syntaxin 16 isoform b [Homo sapiens]
Length = 304
Score = 60.1 bits (144), Expect = 3e-09
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 29/255 (11%)
Query: 104 DLSNTFAKLEKLTILAKR---KSLFDDKAVE---IEELTYIIKQDINSLNKQIAQLQDFV 157
D+ K+++L L + + DD + E IE T I Q + + + L
Sbjct: 67 DVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRA 126
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVS 217
RA Q GR L +V SL L +S F+ ++ LK+ ++R E+ +
Sbjct: 127 RACSEQEGRLL----GNVVASLAQALQELSTSFR---HAQSGYLKRMKNREERSQHFFDT 179
Query: 218 ALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIE 277
++PL + G T QL L+++ ++ R ++ I
Sbjct: 180 SVPLMDDGDDNTLYHRGF----------------TEDQLVLVEQNTLMVEEREREIRQIV 223
Query: 278 STIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMV 337
+I +L IF+ L M+ EQ + RID NV + + E ++ K Q NR ++V
Sbjct: 224 QSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLV 283
Query: 338 KIFLILIVFFIIFVV 352
+ L +I+ +I V+
Sbjct: 284 ILILFVIIIVLIVVL 298
>gi|37577162 syntaxin 2 isoform 2 [Homo sapiens]
Length = 288
Score = 52.8 bits (125), Expect = 5e-07
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 20/223 (8%)
Query: 139 IKQDINSLNKQIAQLQDFVRA--KGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEV 196
IK+++ LNK+I + + +RA K + N V L+ + S + +E
Sbjct: 70 IKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQHSVLSRKFVEA 129
Query: 197 RTE-----NLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSR 251
E L ++RS+ + ++ + L + G S + D+ D +R
Sbjct: 130 MAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDEL-EEMLESGKPSIFTSDIISDSQITR 188
Query: 252 TSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGA 311
Q ++E I+SR + +E++I EL +F +A V+ Q E I I+ NV+ A
Sbjct: 189 -----QALNE----IESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNA 239
Query: 312 QLDVEAAHSE---ILKYFQSVTSNRWLMVKIFLILIVFFIIFV 351
VE A E +KY +W+++ + ++L+ + +
Sbjct: 240 TDYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALII 282
>gi|37577287 syntaxin 2 isoform 1 [Homo sapiens]
Length = 287
Score = 51.6 bits (122), Expect = 1e-06
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 139 IKQDINSLNKQIAQLQDFVRA--KGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEV 196
IK+++ LNK+I + + +RA K + N V L+ + S + +E
Sbjct: 70 IKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQHSVLSRKFVEA 129
Query: 197 RTE-----NLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSR 251
E L ++RS+ + ++ + L + G S + D+ D +R
Sbjct: 130 MAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDEL-EEMLESGKPSIFTSDIISDSQITR 188
Query: 252 TSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGA 311
Q ++E I+SR + +E++I EL +F +A V+ Q E I I+ NV+ A
Sbjct: 189 -----QALNE----IESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNA 239
Query: 312 QLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
VE A E K + + R ++ I + +IV +I + LA
Sbjct: 240 TDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGIILA 283
>gi|50083279 centrosome protein 4 [Homo sapiens]
Length = 1140
Score = 48.1 bits (113), Expect = 1e-05
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 87 AVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSL 146
A+R++ E GK S +E LT + + + + E++ I+K+ I SL
Sbjct: 587 ALREKLEHIEEVSLFGK--SELEKTIEHLTCVNHQ---LESEKYELKSKVLIMKETIESL 641
Query: 147 -NKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQR 205
NK Q Q F G S H +T N++ + + +L +D++ L ++ L+
Sbjct: 642 ENKLKVQAQKFSHVAGDSS--HQKTEVNSLRI-VNEQLQRSVDDYQHRLSIKRGELES-- 696
Query: 206 SRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSY 265
++A + L + L E+H K I ++D + +DE+
Sbjct: 697 ------AQAQIKILEEKIDELNLKMTSQDEEAHVMKKT-IGVIDKEKDFLQETVDEKTEK 749
Query: 266 IQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEI 322
I + + + N E + ++ + + V + +ET+ D + + ++AAH E+
Sbjct: 750 IANLQENLANKEKAVAQMKIMISECESSVNQLKETLVNRDREINSLRRQLDAAHKEL 806
>gi|4759184 syntaxin 3 [Homo sapiens]
Length = 289
Score = 47.8 bits (112), Expect = 2e-05
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 8/218 (3%)
Query: 140 KQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTE 199
K D+ L +I + + VR K +H++ L+ + + S + +EV T+
Sbjct: 74 KDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTK 133
Query: 200 NLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLI 259
+ Q RE+ L + + ES ++DS+ S+Q
Sbjct: 134 YNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQAL-- 191
Query: 260 DEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAH 319
S I+ R + +ES+I EL +F +A +V+ Q E + I+ NV+ VE A
Sbjct: 192 ----SEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKAR 247
Query: 320 SEILK--YFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
E K +QS + +++ + +++++ + ++ L+
Sbjct: 248 DETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLS 285
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin
(with transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 45.1 bits (105), Expect = 1e-04
Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 12/230 (5%)
Query: 118 LAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVV 177
L + KS + + + I +++++ K+I+ L + + + + + T +
Sbjct: 686 LERLKSQILELELNFHKAQEIYEKNLDEKAKEISNLNQLIEEFKKNADNN--SSAFTALS 743
Query: 178 SLQSKLASMSNDFKSVLEVRTE--NLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGA 235
+ +L S + V E+R + L+ + E+ R + N L L
Sbjct: 744 EERDQLLSQVKELSMVTELRAQVKQLEMNLAEAERQRRLDYESQTAHDNLLTEQIHSLSI 803
Query: 236 ESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVE-------LGSIFQ 288
E+ SKDV I+++ + EQ + I+S +QN ES ++E + S +
Sbjct: 804 EAK-SKDVKIEVLQNELDDVQLQFSEQSTLIRSLQSQLQNKESEVLEGAERVRHISSKVE 862
Query: 289 QLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVK 338
+L+ + ++E I ++D+ +L + DVE I + Q VT + M +
Sbjct: 863 ELSQALSQKELEITKMDQLLLEKKRDVETLQQTIEEKDQQVTEISFSMTE 912
Score = 32.3 bits (72), Expect = 0.66
Identities = 50/282 (17%), Positives = 113/282 (40%), Gaps = 42/282 (14%)
Query: 69 KSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDK 128
+SL+T + + + +L+ + S+ + ++L +L+KL ++K++
Sbjct: 1354 ESLKTVSHEAEVHAESLQQKLESSQLQIAGLEHLRELQPKLDELQKL--ISKKE------ 1405
Query: 129 AVEIEELTYIIKQ------DINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSK 182
E+++Y+ Q + + +I + +D ++A +Q + H I LQ +
Sbjct: 1406 ----EDVSYLSGQLSEKEAALTKIQTEIIEQEDLIKALHTQLEMQAKEHDERIK-QLQVE 1460
Query: 183 LASMSND-----------------FKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNH 225
L M ++ L R E LK+ +S +E+ S A + L +
Sbjct: 1461 LCEMKQKPEEIGEESRAKQQIQRKLQAALISRKEALKENKSLQEELSLARGTIERLTKSL 1520
Query: 226 LGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGS 285
+ V + + KD + + ++ +LI E D + + ES + L
Sbjct: 1521 ADVESQV--SAQNKEKDTVLGRLALLQEERDKLITEMDRSLLENQSLSSSCESLKLALEG 1578
Query: 286 IFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQ 327
+ + +VKE I+ + + + + + H E+ K ++
Sbjct: 1579 LTEDKEKLVKE----IESLKSSKIAESTEWQEKHKELQKEYE 1616
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 39.7 bits (91), Expect = 0.004
Identities = 56/283 (19%), Positives = 126/283 (44%), Gaps = 38/283 (13%)
Query: 69 KSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKD-LSNTFAKLEK-LTILAKRKSLFD 126
+ L+ + G+Q ++ R + L+A + + L+N F+ ++ + +L + + +
Sbjct: 455 EELKKKAAGLQAEIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKE 514
Query: 127 DKAV----EIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSK 182
+A E++ L +++ LNK+ Q+QD KG+Q+G + H ++ ++ +
Sbjct: 515 QRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAG---EIHDLKDMLDVKER 571
Query: 183 LASMSNDFKSVLEVRTENLKQQ-RSRREQFS--RAPVSALPLAPNHLGGGAVVLGAESHA 239
+VL+ + ENL++Q R + +Q S + V +L + L E+ A
Sbjct: 572 KV-------NVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTL-EEALA 623
Query: 240 SKDVAID-MMDSRTSQQLQLIDEQDSYIQSRADTMQNI----------ESTIVELGSIFQ 288
K+ I+ + + R + + +E D+Y + D + + E+++++L
Sbjct: 624 EKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHAS 683
Query: 289 QLA-------HMVKEQEETIQRIDENVLGAQLDVEAAHSEILK 324
LA +K E +++ E L + ++ AH L+
Sbjct: 684 SLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEAALE 726
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 38.9 bits (89), Expect = 0.007
Identities = 49/233 (21%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 113 EKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHS 172
E LT +R ++ E++ L +++ LNK+ Q+QD KG+Q+G + H
Sbjct: 480 ESLTAKEQRAAILQ---TEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAG---EIHD 533
Query: 173 NTIVVSLQSKLASMSNDFKSVLEVRTENLKQQ-RSRREQFS--RAPVSALPLAPNHLGGG 229
++ ++ + +VL+ + ENL++Q R + +Q S + V +L +
Sbjct: 534 LKDMLDVKERKV-------NVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTA 586
Query: 230 AVVLGAESHASKDVAID-MMDSRTSQQLQLIDEQDSYIQSRADTMQNI----------ES 278
L E+ A K+ I+ + + R + + +E D+Y + D + + E+
Sbjct: 587 LTTL-EEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQGDLSEKEA 645
Query: 279 TIVELGSIFQQLA-------HMVKEQEETIQRIDENVLGAQLDVEAAHSEILK 324
++++L LA +K E +++ E L + ++ AH L+
Sbjct: 646 SLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEAALE 698
Score = 29.6 bits (65), Expect = 4.3
Identities = 33/174 (18%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 156 FVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDF---KSVLEVRTENLKQQRSRREQFS 212
F++ K Q + L + +T +++LQ+KL +++N F K +EV E+L + +R
Sbjct: 435 FMKNKIGQVKQEL-SRKDTELLALQTKLETLTNQFSDSKQHIEVLKESL-TAKEQRAAIL 492
Query: 213 RAPVSALPLAPNH--------------LGGGAVVLGAESHASKDV------AIDMMDSRT 252
+ V AL L + E H KD+ ++++ +
Sbjct: 493 QTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKI 552
Query: 253 SQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDE 306
+ + +++ + S + ++++++ + L + E+E TI+R+ E
Sbjct: 553 ENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKE 606
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 38.9 bits (89), Expect = 0.007
Identities = 47/250 (18%), Positives = 108/250 (43%), Gaps = 33/250 (13%)
Query: 85 LRAVRQRSEFTL--MAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQD 142
L +R + E + + +R+ K+ T +LEK AKRK D + ++++ ++
Sbjct: 1025 LAKIRNKQEVMISDLEERLKKE-EKTRQELEK----AKRK--LDGETTDLQDQIAELQAQ 1077
Query: 143 INSLNKQIAQLQDFVR---AKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTE 199
I+ L Q+A+ ++ ++ A+G H + ++ +V LQ+++A + DF+S R +
Sbjct: 1078 IDELKLQLAKKEEELQGALARGDDETLH-KNNALKVVRELQAQIAELQEDFESEKASRNK 1136
Query: 200 NLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLI 259
KQ+R E+ L E + D + RT ++ ++
Sbjct: 1137 AEKQKRDLSEELE-------------------ALKTELEDTLDTTAAQQELRTKREQEVA 1177
Query: 260 DEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAH 319
+ + + + + I+ + ++L+ +++ + +++N G + D +
Sbjct: 1178 ELKKALEEETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLEKNKQGLETDNKELA 1237
Query: 320 SEILKYFQSV 329
E+ K Q V
Sbjct: 1238 CEV-KVLQQV 1246
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 38.9 bits (89), Expect = 0.007
Identities = 46/219 (21%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 99 KRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVR 158
K++ DL K +KL + + L E+E L +++ +N+ N++I LQD VR
Sbjct: 386 KKLQMDLEEQHNK-DKLNLEEDKNQLQQ----ELENLKEVLEDKLNTANQEIGHLQDMVR 440
Query: 159 AK----GSQSG--RHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFS 212
GS G LQ + L S+ ++L V E L+Q+R + E+
Sbjct: 441 KSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDALLNVEGE-LEQERQQHEETI 499
Query: 213 RAPVSALPLAPNHLGGGAVVLGAE------SHASKDVAIDMMDSRTSQQLQLIDEQDSYI 266
A L + + + E S +++ + + + S QL+ +D
Sbjct: 500 AAMKEEEKLKVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQLKDREK 559
Query: 267 QSRADTMQ-NIESTIVELGSIFQQLAHMVKEQEETIQRI 304
+ D+ Q +E + ++ + Q L + + + ++Q++
Sbjct: 560 NAARDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQL 598
Score = 32.3 bits (72), Expect = 0.66
Identities = 44/235 (18%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 92 SEFTLMAKRIGKDLSNTFAKLEKLTI-LAKRKSLFDDKAVEIEELTYIIKQDINSLNKQI 150
++ +L+ + + LS + L++L + + + E+EE + + +
Sbjct: 575 NQISLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLA 634
Query: 151 AQLQDFVRAKGSQS-GRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRRE 209
Q + + K ++ HLQ + + SL+ F+ +E + L+ R E
Sbjct: 635 FQTMEEEKEKEQRALENHLQQKHSAELQSLKDAHRESMEGFRIEME---QELQTLRFELE 691
Query: 210 QFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSR 269
+A +++L NH A+ L +H +++A M+ S + SR
Sbjct: 692 DEGKAMLASLRSELNHQHAAAIDLLRHNH-HQELAAAKMELERSIDI-----------SR 739
Query: 270 ADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILK 324
+ ++I I +L + H + E ++ +Q + EN+ ++E EIL+
Sbjct: 740 RQSKEHI-CRITDLQEELRHREHHISELDKEVQHLHENISALTKELEFKGKEILR 793
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 38.9 bits (89), Expect = 0.007
Identities = 46/219 (21%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 99 KRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVR 158
K++ DL K +KL + + L E+E L +++ +N+ N++I LQD VR
Sbjct: 506 KKLQMDLEEQHNK-DKLNLEEDKNQLQQ----ELENLKEVLEDKLNTANQEIGHLQDMVR 560
Query: 159 AK----GSQSG--RHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFS 212
GS G LQ + L S+ ++L V E L+Q+R + E+
Sbjct: 561 KSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDALLNVEGE-LEQERQQHEETI 619
Query: 213 RAPVSALPLAPNHLGGGAVVLGAE------SHASKDVAIDMMDSRTSQQLQLIDEQDSYI 266
A L + + + E S +++ + + + S QL+ +D
Sbjct: 620 AAMKEEEKLKVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQLKDREK 679
Query: 267 QSRADTMQ-NIESTIVELGSIFQQLAHMVKEQEETIQRI 304
+ D+ Q +E + ++ + Q L + + + ++Q++
Sbjct: 680 NAARDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQL 718
Score = 32.3 bits (72), Expect = 0.66
Identities = 44/235 (18%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 92 SEFTLMAKRIGKDLSNTFAKLEKLTI-LAKRKSLFDDKAVEIEELTYIIKQDINSLNKQI 150
++ +L+ + + LS + L++L + + + E+EE + + +
Sbjct: 695 NQISLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLA 754
Query: 151 AQLQDFVRAKGSQS-GRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRRE 209
Q + + K ++ HLQ + + SL+ F+ +E + L+ R E
Sbjct: 755 FQTMEEEKEKEQRALENHLQQKHSAELQSLKDAHRESMEGFRIEME---QELQTLRFELE 811
Query: 210 QFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSR 269
+A +++L NH A+ L +H +++A M+ S + SR
Sbjct: 812 DEGKAMLASLRSELNHQHAAAIDLLRHNH-HQELAAAKMELERSIDI-----------SR 859
Query: 270 ADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILK 324
+ ++I I +L + H + E ++ +Q + EN+ ++E EIL+
Sbjct: 860 RQSKEHI-CRITDLQEELRHREHHISELDKEVQHLHENISALTKELEFKGKEILR 913
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 38.5 bits (88), Expect = 0.009
Identities = 52/250 (20%), Positives = 103/250 (41%), Gaps = 23/250 (9%)
Query: 89 RQRSEFTL---MAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINS 145
RQR E+T MA R+ + + K K +R+ +A + EEL + Q +
Sbjct: 298 RQRQEWTAAIQMAIRLQAEGKTSLHKDLKQKRREQREQRERRRAAKEEELLRL--QQLQE 355
Query: 146 LNKQIAQLQDFVRAKGSQSGRHLQ-------THSNTIVVSLQSKLASMSN---DFKSVLE 195
++ Q + ++ Q+ R LQ + + +L+ +L ++ +E
Sbjct: 356 EKERKLQELELLQEAQRQAERLLQEEEERRRSQHRELQQALEGQLREAEQARASMQAEME 415
Query: 196 VRTENLKQQRSR---REQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRT 252
++ E +QR R E+ + AL L V A++ ++ + +
Sbjct: 416 LKEEEAARQRQRIKELEEMQQRLQEALQLEVKARRDEESVRIAQTRL-----LEEEEEKL 470
Query: 253 SQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQ 312
Q +QL +EQ+ YI+ + ++ + + QQ ++E + QR DE+V AQ
Sbjct: 471 KQLMQLKEEQERYIERAQQEKEELQQEMAQQSRSLQQAQQQLEEVRQNRQRADEDVEAAQ 530
Query: 313 LDVEAAHSEI 322
+ A + +
Sbjct: 531 RKLRQASTNV 540
>gi|20149560 syntaxin 4 [Homo sapiens]
Length = 297
Score = 38.5 bits (88), Expect = 0.009
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 266 IQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKY 325
I +R +Q +E +I EL IF LA V+ Q E I RI++N+L + VE +
Sbjct: 203 ISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKTA 262
Query: 326 FQSVTSNRWLMVKIFLILIVFFIIFVVFL 354
++ R V I + + + ++ V +
Sbjct: 263 LENQKKARKKKVLIAICVSITVVLLAVII 291
>gi|8394376 syntaxin 18 [Homo sapiens]
Length = 335
Score = 38.5 bits (88), Expect = 0.009
Identities = 23/108 (21%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 249 DSRTSQQLQLIDEQDSYI----QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRI 304
D + +++Q+ ++++ + S D ++ IE +VE+ + + V +QE I I
Sbjct: 225 DELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSI 284
Query: 305 DENVLGAQLDVEAAHSEILKYFQSVTSNR-WLMVKIFLILIVFFIIFV 351
+ V+GA +++ + +I + ++ R W++ FL++ F ++F+
Sbjct: 285 HQLVVGATENIKEGNEDIREAIKNNAGFRVWIL--FFLVMCSFSLLFL 330
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 37.0 bits (84), Expect = 0.027
Identities = 65/267 (24%), Positives = 108/267 (40%), Gaps = 41/267 (15%)
Query: 53 DTMSCRDRTQEFL-SACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAK 111
DT++ TQE L +A +SL+ Q I T K +I +++S
Sbjct: 954 DTVNMNIDTQEQLRNALESLKQHQETINTLK----------------SKISEEVSRNLHM 997
Query: 112 LEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQI--AQLQDFVRAKGSQSGRHLQ 169
E + K F K V I++ KQD+ + N Q A ++D + + L
Sbjct: 998 EENT---GETKDEFQQKMVGIDK-----KQDLEAKNTQTLTADVKDNEIIEQQRKIFSLI 1049
Query: 170 THSNTIVVSLQSKLAS---MSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHL 226
N + L+S +A + D K +E+ EN ++ R ++ + + NH
Sbjct: 1050 QEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQ-EIVAQEKNH- 1107
Query: 227 GGGAVVLGAESHASKDVAIDMMDS--RTSQQLQLIDEQDSYIQSRADTMQN----IESTI 280
A+ E + D ++ + SQQLQ +Q +Q MQ IE+
Sbjct: 1108 ---AIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLK 1164
Query: 281 VELGSIFQQLAHMVKEQEETIQRIDEN 307
EL + L HM E+ E Q+++EN
Sbjct: 1165 NELKNKELTLEHMETERLELAQKLNEN 1191
Score = 31.2 bits (69), Expect = 1.5
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 103 KDLSNTFAKLEKLTILAKRKSLFDDKA---VEIEELTYIIK-----QDINSLNKQ---IA 151
K++S T + +L +L ++ + D +E+E L K ++I SL K+ +
Sbjct: 1296 KEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLK 1355
Query: 152 QLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQF 211
+++ + K Q H++ I S QSK N ++ + + S EQF
Sbjct: 1356 TIKEALEVKHDQLKEHIRETLAKIQES-QSKQEQSLN-----MKEKDNETTKIVSEMEQF 1409
Query: 212 SRAPVSALPLAPNHLGGGAVVLGAESHAS-KDVAIDMMDSRTSQQLQLIDEQDSYIQSRA 270
+ L + LG + ESH K VA + D + Q++ +QS +
Sbjct: 1410 KPKDSALLRIEIEMLGLSKRL--QESHDEMKSVAKEKDDLQRLQEV---------LQSES 1458
Query: 271 DTM-QNIESTIVELGSIFQQL--AHM-VKEQEETIQRIDENVLGAQLDVEAAHSEI 322
D + +NI+ + + ++L AH +KEQEETI + N+ + ++ ++
Sbjct: 1459 DQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQL 1514
>gi|49258196 syntaxin 19 [Homo sapiens]
Length = 294
Score = 37.0 bits (84), Expect = 0.027
Identities = 38/210 (18%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 99 KRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVR 158
++ G+ + A + + ++L + ++ + ++ E I + +N L K++ + +
Sbjct: 69 QKFGQQQKSLVASMRRFSLLKRESTITKEIKIQAE----YINRSLNDLVKEVKKSE---- 120
Query: 159 AKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSA 218
++G S+ + L+S+ A+M F+ ++ + + + ++ + + F +
Sbjct: 121 ---VENGP-----SSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFI---LRQ 169
Query: 219 LPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIES 278
L +A + V H K ++ + ++ + Q S I+ R + N+E+
Sbjct: 170 LEVAGKEMSEEDV--NDMLHQGK---WEVFNESLLTEINITKAQLSEIEQRHKELVNLEN 224
Query: 279 TIVELGSIFQQLAHMVKEQEETIQRIDENV 308
I +L +F Q++ +V+EQ E+I I+ V
Sbjct: 225 QIKDLRDLFIQISLLVEEQGESINNIEMTV 254
>gi|63054866 leucine rich repeat containing 16A [Homo sapiens]
Length = 1326
Score = 36.2 bits (82), Expect = 0.046
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 175 IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPN--HLGGGAVV 232
I V +Q L S+ N ++ E+LK E+ R ++ L PN H+GG +
Sbjct: 694 ICVKVQDHLNSLRNCGGDAIQ---EDLKSA----ERLMRDAKNSKTLLPNLYHVGGASWA 746
Query: 233 LGAESHASKDVAIDMMDSRTSQQLQLIDEQ-DSYIQSRADTMQNIESTIVELGSIFQQLA 291
GA S + + ++S + +++DEQ + ++S D +N+ +++ I Q L
Sbjct: 747 -GASGLLSSPIQ-ETLESMAGEVTRVVDEQLKALLESMVDAAENLCPNVMKKAHIRQDLI 804
Query: 292 HMVKEQEETIQRIDENVLGAQ--LDVEAAHSEILKYFQSVTSNR 333
H E+ + +NVL Q +D+ SE+ S S+R
Sbjct: 805 HASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDR 848
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 36.2 bits (82), Expect = 0.046
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 98 AKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFV 157
AK + K + + + +L + K++ + E+E+L ++ D + ++QIA LQ +
Sbjct: 1022 AKNLTKLKNKHESMISELEVRLKKE---EKSRQELEKLKRKLEGDASDFHEQIADLQAQI 1078
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVR------TENLKQQRSRREQF 211
Q + + + L ++A +N K + E+ E+L +R+ R +
Sbjct: 1079 AELKMQLAKK-EEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKA 1137
Query: 212 SRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDS-RTSQQLQLIDEQDSYIQSRA 270
+ LG E A K D +DS T Q+L+ EQ+ + +A
Sbjct: 1138 EKQKRD---------------LGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKA 1182
Query: 271 --DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENV 308
+ ++ E+ + E+ Q + EQ E +R N+
Sbjct: 1183 LDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKANL 1222
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 36.2 bits (82), Expect = 0.046
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 98 AKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFV 157
AK + K + + + +L + K++ + E+E+L ++ D + ++QIA LQ +
Sbjct: 1029 AKNLTKLKNKHESMISELEVRLKKE---EKSRQELEKLKRKLEGDASDFHEQIADLQAQI 1085
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVR------TENLKQQRSRREQF 211
Q + + + L ++A +N K + E+ E+L +R+ R +
Sbjct: 1086 AELKMQLAKK-EEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKA 1144
Query: 212 SRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDS-RTSQQLQLIDEQDSYIQSRA 270
+ LG E A K D +DS T Q+L+ EQ+ + +A
Sbjct: 1145 EKQKRD---------------LGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKA 1189
Query: 271 --DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENV 308
+ ++ E+ + E+ Q + EQ E +R N+
Sbjct: 1190 LDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKANL 1229
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 36.2 bits (82), Expect = 0.046
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 98 AKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFV 157
AK + K + + + +L + K++ + E+E+L ++ D + ++QIA LQ +
Sbjct: 1029 AKNLTKLKNKHESMISELEVRLKKE---EKSRQELEKLKRKLEGDASDFHEQIADLQAQI 1085
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVR------TENLKQQRSRREQF 211
Q + + + L ++A +N K + E+ E+L +R+ R +
Sbjct: 1086 AELKMQLAKK-EEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKA 1144
Query: 212 SRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDS-RTSQQLQLIDEQDSYIQSRA 270
+ LG E A K D +DS T Q+L+ EQ+ + +A
Sbjct: 1145 EKQKRD---------------LGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKA 1189
Query: 271 --DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENV 308
+ ++ E+ + E+ Q + EQ E +R N+
Sbjct: 1190 LDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKANL 1229
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 36.2 bits (82), Expect = 0.046
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 98 AKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFV 157
AK + K + + + +L + K++ + E+E+L ++ D + ++QIA LQ +
Sbjct: 1022 AKNLTKLKNKHESMISELEVRLKKE---EKSRQELEKLKRKLEGDASDFHEQIADLQAQI 1078
Query: 158 RAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVR------TENLKQQRSRREQF 211
Q + + + L ++A +N K + E+ E+L +R+ R +
Sbjct: 1079 AELKMQLAKK-EEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKA 1137
Query: 212 SRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDS-RTSQQLQLIDEQDSYIQSRA 270
+ LG E A K D +DS T Q+L+ EQ+ + +A
Sbjct: 1138 EKQKRD---------------LGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKA 1182
Query: 271 --DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENV 308
+ ++ E+ + E+ Q + EQ E +R N+
Sbjct: 1183 LDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKANL 1222
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 35.4 bits (80), Expect = 0.078
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 39/253 (15%)
Query: 93 EFTLMAKRIGKDLSNTFAKLEKLTILAKRKSLF--------------DDKAVEIEELTYI 138
E L+ RI + +N + EK LAK K+ + + E+E+
Sbjct: 993 EKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRK 1052
Query: 139 IKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRT 198
++ D L+ QIA+LQ + Q + + + ++ + A + K + E+ +
Sbjct: 1053 LEGDSTDLSDQIAELQAQIAELKMQLAKK-EEELQAALARVEEEAAQKNMALKKIRELES 1111
Query: 199 ------ENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRT 252
E+L+ +R+ R + + LG E A K D +DS
Sbjct: 1112 QISELQEDLESERASRNKAEKQKRD---------------LGEELEALKTELEDTLDSTA 1156
Query: 253 SQQ-LQLIDEQDSYIQSRA--DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVL 309
+QQ L+ EQ+ I + + + E+ I E+ Q + EQ E +R+ N+
Sbjct: 1157 AQQELRSKREQEVNILKKTLEEEAKTHEAQIQEMRQKHSQAVEELAEQLEQTKRVKANLE 1216
Query: 310 GAQLDVEAAHSEI 322
A+ +E E+
Sbjct: 1217 KAKQTLENERGEL 1229
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 35.4 bits (80), Expect = 0.078
Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 39/235 (16%)
Query: 70 SLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKL-EKLTILAKRKSLFDDK 128
SL QN IQ+ K L VR E I KDL + EK+ + + K +
Sbjct: 1388 SLTNNQNLIQSLKEDLNKVRTEKE------TIQKDLDAKIIDIQEKVKTITQVKKIGRRY 1441
Query: 129 AVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSN 188
+ EEL AQ + SG H + H + + + + +
Sbjct: 1442 KTQYEELK--------------AQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLNQAE 1487
Query: 189 DFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMM 248
LE + ENL++ S +E +R +L V L +E + D+
Sbjct: 1488 TKSKSLESQVENLQKTLSEKETEAR-----------NLQEQTVQLQSELSRLRQ---DLQ 1533
Query: 249 DSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQR 303
D RT+Q+ QL + + + +S I L + QL KE EE QR
Sbjct: 1534 D-RTTQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQL---TKENEELKQR 1584
Score = 33.9 bits (76), Expect = 0.23
Identities = 51/259 (19%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 72 QTRQNGIQTNKPALRAVRQRSE------FTLMAKRIGKDLSNTFAKLEK----------- 114
Q QN + TN ++ + +RSE + +++ ++S+ KLE
Sbjct: 809 QRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRN 868
Query: 115 --LTILAKRKSLFDDKAVEI--EELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQT 170
+ +L ++ L + + + +EL +++I +L + ++ ++ V ++ SQ Q
Sbjct: 869 LDVQLLDTKRQLDTETNLHLNTKELLKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQP 928
Query: 171 HSNTIVVSLQSKLASMS---NDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLG 227
+ V L S+L ND K L+ T N++Q + A V++L + N
Sbjct: 929 SNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQ--------AMVTSLEESLNK-- 978
Query: 228 GGAVVLGAESHASKDVAIDMMDS---RTSQQLQLIDEQDSYIQSRADTMQNIESTIVELG 284
K++ + + +S +T + +L++ + + + D + IES +L
Sbjct: 979 ----EKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLS 1034
Query: 285 SIFQQLAHMVKEQEETIQR 303
+ + L+ + E +E +QR
Sbjct: 1035 ELKKTLSSVQNEVQEALQR 1053
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 34.7 bits (78), Expect = 0.13
Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 111 KLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQT 170
KLE + + +S+ KA +E++ ++ ++ + ++Q + +Q R LQT
Sbjct: 1226 KLEIDDLSSSMESVSKSKA-NLEKICRTLEDQLSEARGKNEEIQRSLSELTTQKSR-LQT 1283
Query: 171 HSNTIVVSLQSK--LASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLG- 227
+ + L+ K + S + K +TE LK+Q + A AL + +
Sbjct: 1284 EAGELSRQLEEKESIVSQLSRSKQAFTQQTEELKRQLEEENKAKNALAHALQSSRHDCDL 1343
Query: 228 ----------GGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIE 277
G A + A S A+ +VA RT + I + +++ Q ++
Sbjct: 1344 LREQYEEEQEGKAELQRALSKANSEVA----QWRTKYETDAIQRTEELEEAKKKLAQRLQ 1399
Query: 278 STIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHS 320
+ ++ ++ + A + E+T QR+ V +DVE A+S
Sbjct: 1400 DSEEQVEAVNAKCASL----EKTKQRLQGEVEDLMVDVERANS 1438
>gi|146260271 hypothetical protein LOC129881 [Homo sapiens]
Length = 552
Score = 34.7 bits (78), Expect = 0.13
Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 69 KSLQTRQNGIQTNKPALRAVRQ-RSEFTLMAKRIGKDLSNTFAKLEKLTILAKRKSLFDD 127
K +Q + + LRA R+ + E L ++ + K +NT+A +++ + AK+K D
Sbjct: 56 KRIQDSLDRLTREAACLRAERKAKKEMHLRSQEVVKHWTNTYAGMKEQKLEAKKKR---D 112
Query: 128 KAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMS 187
+ +E E ++++I K+ +++ + + Q+ R HS + L+ +
Sbjct: 113 EEIEAERQILDLEEEIYKQGKRKKAIENAKQYQFYQTERVKNFHSGLL-------LSRVM 165
Query: 188 NDFKSVLEVRTENLKQQRSRREQ 210
+ + +E R +K + EQ
Sbjct: 166 KERDAQIEFRKSKIKSDKKWEEQ 188
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,823,280
Number of Sequences: 37866
Number of extensions: 523433
Number of successful extensions: 5066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 4686
Number of HSP's gapped (non-prelim): 467
length of query: 355
length of database: 18,247,518
effective HSP length: 103
effective length of query: 252
effective length of database: 14,347,320
effective search space: 3615524640
effective search space used: 3615524640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.