Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 93352549
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93352549 DnaJ (Hsp40) homolog, subfamily C, member 28 [Homo
sapiens]
(388 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93352549 DnaJ (Hsp40) homolog, subfamily C, member 28 [Homo s... 783 0.0
gi|40254908 DnaJ (Hsp40) homolog, subfamily C, member 28 [Homo s... 783 0.0
gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform... 47 2e-05
gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo s... 47 3e-05
gi|22749377 DnaJ (Hsp40) homolog, subfamily C, member 18 [Homo s... 46 5e-05
gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform... 46 7e-05
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 45 9e-05
gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo sap... 45 9e-05
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 45 1e-04
gi|6005872 SEC63-like protein [Homo sapiens] 45 1e-04
gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ... 45 1e-04
gi|5031741 DnaJ subfamily A member 2 [Homo sapiens] 43 6e-04
gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo s... 43 6e-04
gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ... 42 0.001
gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ... 42 0.001
gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform... 42 0.001
gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform... 42 0.001
gi|157671935 DnaJ (Hsp40) homolog, subfamily C, member 4 [Homo s... 42 0.001
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap... 41 0.002
gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo sap... 41 0.002
gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform... 41 0.002
gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform... 40 0.003
gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sap... 39 0.006
gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo sap... 39 0.006
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 39 0.006
gi|72534740 DnaJ (Hsp40) homolog, subfamily B, member 14 isoform... 39 0.008
gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo sa... 38 0.014
gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ... 38 0.014
gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ... 38 0.014
gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo sa... 38 0.014
>gi|93352549 DnaJ (Hsp40) homolog, subfamily C, member 28 [Homo
sapiens]
Length = 388
Score = 783 bits (2021), Expect = 0.0
Identities = 388/388 (100%), Positives = 388/388 (100%)
Query: 1 MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEE 60
MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEE
Sbjct: 1 MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEE 60
Query: 61 GCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEE 120
GCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEE
Sbjct: 61 GCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEE 120
Query: 121 EDVEKFKYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFP 180
EDVEKFKYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFP
Sbjct: 121 EDVEKFKYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFP 180
Query: 181 DSVIVKNIRQSKQQKITQAIERLVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMT 240
DSVIVKNIRQSKQQKITQAIERLVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMT
Sbjct: 181 DSVIVKNIRQSKQQKITQAIERLVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMT 240
Query: 241 HNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQF 300
HNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQF
Sbjct: 241 HNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQF 300
Query: 301 QENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEVTDRNPNNLDQ 360
QENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEVTDRNPNNLDQ
Sbjct: 301 QENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEVTDRNPNNLDQ 360
Query: 361 GEGEKTPEIKKGFLNWMNLWKFIKIRSF 388
GEGEKTPEIKKGFLNWMNLWKFIKIRSF
Sbjct: 361 GEGEKTPEIKKGFLNWMNLWKFIKIRSF 388
>gi|40254908 DnaJ (Hsp40) homolog, subfamily C, member 28 [Homo
sapiens]
Length = 388
Score = 783 bits (2021), Expect = 0.0
Identities = 388/388 (100%), Positives = 388/388 (100%)
Query: 1 MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEE 60
MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEE
Sbjct: 1 MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEE 60
Query: 61 GCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEE 120
GCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEE
Sbjct: 61 GCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEE 120
Query: 121 EDVEKFKYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFP 180
EDVEKFKYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFP
Sbjct: 121 EDVEKFKYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFP 180
Query: 181 DSVIVKNIRQSKQQKITQAIERLVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMT 240
DSVIVKNIRQSKQQKITQAIERLVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMT
Sbjct: 181 DSVIVKNIRQSKQQKITQAIERLVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMT 240
Query: 241 HNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQF 300
HNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQF
Sbjct: 241 HNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQF 300
Query: 301 QENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEVTDRNPNNLDQ 360
QENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEVTDRNPNNLDQ
Sbjct: 301 QENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEVTDRNPNNLDQ 360
Query: 361 GEGEKTPEIKKGFLNWMNLWKFIKIRSF 388
GEGEKTPEIKKGFLNWMNLWKFIKIRSF
Sbjct: 361 GEGEKTPEIKKGFLNWMNLWKFIKIRSF 388
>gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 1
[Homo sapiens]
Length = 420
Score = 47.4 bits (111), Expect = 2e-05
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 12 LRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKI--REYYRLLNVEEGCSADEVRE 69
L S + K + P +++ G ++ R T + ++YY++L + G + DE+++
Sbjct: 35 LASLMFKIQLEPLKLRAWTLNGFVKFRNKETSAGPVAVMGKDYYKILGIPSGANEDEIKK 94
Query: 70 SFHKLAKQYHPDSGSNTADSATFIRIEKAY 99
++ K+A +YHPD F I +AY
Sbjct: 95 AYRKMALKYHPDKNKEPNAEEKFKEIAEAY 124
>gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo
sapiens]
Length = 782
Score = 47.0 bits (110), Expect = 3e-05
Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 53 YRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNA 112
YR+L V S ++++++ KLA+++HPD + FI+I KAY ++LS+ +++N
Sbjct: 31 YRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAY-EILSNEEKRSNY 89
Query: 113 SQ--SKGEEEEDVEKFKYKTPQHRHY 136
Q GE + ++ + + + RH+
Sbjct: 90 DQYGDAGENQGYQKQQQQREYRFRHF 115
>gi|22749377 DnaJ (Hsp40) homolog, subfamily C, member 18 [Homo
sapiens]
Length = 358
Score = 46.2 bits (108), Expect = 5e-05
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 47 KKIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHV 106
KK R YY +L V S +E+++++ KLA ++HPD N A AT A++ + +
Sbjct: 78 KKCRNYYEILGVSRDASDEELKKAYRKLALKFHPD--KNCAPGAT-----DAFKAIGNAF 130
Query: 107 IEQTNASQSKGEEEEDVEKFKYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQV 166
+N + +E E+ + P+ R Y +YR F AD E++
Sbjct: 131 AVLSNPDKRLRYDEYGDEQVTFTAPRARPY---------------NYYRDFEADITPEEL 175
>gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform
2 [Homo sapiens]
Length = 382
Score = 45.8 bits (107), Expect = 7e-05
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 16 LIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKI--REYYRLLNVEEGCSADEVRESFHK 73
+ K + P +++ G ++ R T + ++YY++L + G + DE+++++ K
Sbjct: 1 MFKIQLEPLKLRAWTLNGFVKFRNKETSAGPVAVMGKDYYKILGIPSGANEDEIKKAYRK 60
Query: 74 LAKQYHPDSGSNTADSATFIRIEKAY 99
+A +YHPD F I +AY
Sbjct: 61 MALKYHPDKNKEPNAEEKFKEIAEAY 86
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 45.4 bits (106), Expect = 9e-05
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 34 IIRNRMMSTHKSKKKIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFI 93
+++N + KSK+K +YY++L V++ S DE+++++ K A +HPD S A +
Sbjct: 366 LLKNAQLELRKSKRK--DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEVQK 422
Query: 94 RIEKAYRKV 102
EK +++V
Sbjct: 423 EEEKKFKEV 431
>gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo
sapiens]
Length = 223
Score = 45.4 bits (106), Expect = 9e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 50 REYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAY 99
+ YY +L V + S +++++FHKLA +YHPD + A F I +AY
Sbjct: 25 KSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAY 74
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 34 IIRNRMMSTHKSKKKIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFI 93
+++N + KSK+K +YY++L V++ S DE+++++ K A +HPD S A +
Sbjct: 310 LLKNAQLELKKSKRK--DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEVQK 366
Query: 94 RIEKAYRKV 102
EK +++V
Sbjct: 367 EEEKKFKEV 375
>gi|6005872 SEC63-like protein [Homo sapiens]
Length = 760
Score = 44.7 bits (104), Expect = 1e-04
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 44 KSKKKIREY--YRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAY 99
K+ ++ +EY Y +LN++ G + E+++ + L+ +YHPD G D F+RI KAY
Sbjct: 95 KTDREYQEYNPYEVLNLDPGATVAEIKKQYRLLSLKYHPDKG---GDEVMFMRIAKAY 149
>gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 3
[Homo sapiens]
Length = 348
Score = 44.7 bits (104), Expect = 1e-04
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 50 REYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAY 99
++YY++L + G + DE+++++ K+A +YHPD F I +AY
Sbjct: 3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAY 52
>gi|5031741 DnaJ subfamily A member 2 [Homo sapiens]
Length = 412
Score = 42.7 bits (99), Expect = 6e-04
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 53 YRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSH 105
Y +L V G S +E+++++ KLAK+YHPD N D F I AY +VLS+
Sbjct: 10 YDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDK--FKEISFAY-EVLSN 59
>gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo
sapiens]
Length = 793
Score = 42.7 bits (99), Expect = 6e-04
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 50 REYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADS-ATFIRIEKAY 99
+++Y LL V + S+ E+R++F KLA + HPD N ++ F++I +AY
Sbjct: 34 QDFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAY 84
>gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
sapiens]
Length = 409
Score = 41.6 bits (96), Expect = 0.001
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 44 KSKKKIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAY 99
K K+ ++YY +L V G S +++++++ +LA ++HPD + F I AY
Sbjct: 137 KRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAY 192
>gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
sapiens]
Length = 409
Score = 41.6 bits (96), Expect = 0.001
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 44 KSKKKIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAY 99
K K+ ++YY +L V G S +++++++ +LA ++HPD + F I AY
Sbjct: 137 KRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAY 192
>gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 2
[Homo sapiens]
Length = 453
Score = 41.6 bits (96), Expect = 0.001
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 41 STHKSKKKIRE-YYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADS-ATFIRIEKA 98
S H S +E YY++L V S E+++++++LAK+YHPD+ + + F ++ +A
Sbjct: 82 SFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEA 141
Query: 99 YRKVLSHVIEQ 109
Y +VLS +++
Sbjct: 142 Y-EVLSDEVKR 151
>gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 1
[Homo sapiens]
Length = 480
Score = 41.6 bits (96), Expect = 0.001
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 41 STHKSKKKIRE-YYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADS-ATFIRIEKA 98
S H S +E YY++L V S E+++++++LAK+YHPD+ + + F ++ +A
Sbjct: 82 SFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEA 141
Query: 99 YRKVLSHVIEQ 109
Y +VLS +++
Sbjct: 142 Y-EVLSDEVKR 151
>gi|157671935 DnaJ (Hsp40) homolog, subfamily C, member 4 [Homo
sapiens]
Length = 241
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 52 YYRLLNVEEGCSADEVRESFHKLAKQYHPD-SGSNTADSATFIRIEKAYRKVLSHVIEQT 110
YY LL V G S +EV+ +F +K+ HPD N + + F+ + +AYR VLS EQ+
Sbjct: 35 YYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYR-VLSR--EQS 91
Query: 111 NAS 113
S
Sbjct: 92 RRS 94
>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
sapiens]
Length = 504
Score = 41.2 bits (95), Expect = 0.002
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 50 REYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTAD----SATFIRIEKAYRKVLSH 105
R+YY++L V+ E+ +++ KLA Q+HPD+ N + FI I A ++VLS
Sbjct: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAA-KEVLSD 451
Query: 106 VIEQTNASQSKGEEEEDVEKFK--YKTPQHRHYLSFEG 141
+ GE+ D E + P HR + S++G
Sbjct: 452 --PEMRKKFDDGEDPLDAESQQGGGGNPFHRSWNSWQG 487
>gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo
sapiens]
Length = 337
Score = 41.2 bits (95), Expect = 0.002
Identities = 17/55 (30%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 50 REYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLS 104
++YY +L +E+G S +++++++ K A ++HPD + F + +AY +VLS
Sbjct: 3 KDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAY-EVLS 56
>gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 1
[Homo sapiens]
Length = 426
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 43 HKSKKKIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKV 102
HK K+ +YY +L V+ S +E+++++ KLA +YHPD N + F I +AY +V
Sbjct: 28 HKMVKET-QYYDILGVKPSASPEEIKKAYRKLALKYHPD--KNPDEGEKFKLISQAY-EV 83
Query: 103 LS 104
LS
Sbjct: 84 LS 85
>gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 2
[Homo sapiens]
Length = 397
Score = 40.4 bits (93), Expect = 0.003
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 48 KIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLS 104
K +YY +L V+ S +E+++++ KLA +YHPD N + F I +AY +VLS
Sbjct: 3 KETQYYDILGVKPSASPEEIKKAYRKLALKYHPD--KNPDEGEKFKLISQAY-EVLS 56
>gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo
sapiens]
Length = 340
Score = 39.3 bits (90), Expect = 0.006
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 50 REYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAY 99
++YY+ L + G S +E++ ++ + A +YHPD F I +AY
Sbjct: 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAY 52
>gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo
sapiens]
Length = 397
Score = 39.3 bits (90), Expect = 0.006
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 52 YYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLS 104
YY +L V+ + +E+++++ KLA +YHPD N + F +I +AY +VLS
Sbjct: 7 YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEK--FKQISQAY-EVLS 56
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 39.3 bits (90), Expect = 0.006
Identities = 61/284 (21%), Positives = 113/284 (39%), Gaps = 59/284 (20%)
Query: 96 EKAYRKVLSHVIEQTNASQSKGEE----------------EEDVEKFKYKTPQHRHYLSF 139
EKA R+V+ ++Q A K + E++ + K K Q R+ L
Sbjct: 1213 EKAEREVVVRQLQQELADTLKKQSMSEASLEVTSRYRINLEDETQDLKKKLGQIRNQL-- 1270
Query: 140 EGIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFPDSVIVKNIRQSKQQKITQA 199
+E R A R AE++ ++ KQKL+ V VK K
Sbjct: 1271 ----------QEAQDRHTEAVRCAEKMQDH-KQKLEKDNAKLKVTVK--------KQMDK 1311
Query: 200 IERLVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMTHNLNRILIDNGYQPEWILK 259
IE L ++L+ ++++ + + L K LK+ +C+ M N+
Sbjct: 1312 IEELQKNLLNANLSEDEKEQLK-KLMELKQSLECNLDQEMKKNV---------------- 1354
Query: 260 QKEISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQFQENIR--KLNKRINDFNLI 317
E+ I + + ++RKKL + QF+ +I+ KL +I+D
Sbjct: 1355 --ELEREITGFKNLLKMTRKKLNEYENGEFSFHGDLKTSQFEMDIQINKLKHKIDDLTAE 1412
Query: 318 VPILTRQKVHFDAQKEIVRAQKI-YETLIKTKEVTDRNPNNLDQ 360
+ + +H D + +I++ + + +T+ K E +N L+Q
Sbjct: 1413 LETAGSKCLHLDTKNQILQEELLSMKTVQKKCEKLQKNKKKLEQ 1456
>gi|72534740 DnaJ (Hsp40) homolog, subfamily B, member 14 isoform 1
[Homo sapiens]
Length = 379
Score = 38.9 bits (89), Expect = 0.008
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 45 SKKKIREYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLS 104
S K + YY +L V + +++++++ KLA ++HPD + F +I AY VLS
Sbjct: 102 SINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAY-AVLS 160
Query: 105 HVIEQTNASQSKGEEE 120
+ ++ + EE+
Sbjct: 161 NPEKRKQYDLTGNEEQ 176
>gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo
sapiens]
Length = 309
Score = 38.1 bits (87), Expect = 0.014
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 51 EYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSA--TFIRIEKAYRKVLSH 105
+YY +L ++ S +++++++HK+A ++HPD + A F + +AY +VLS+
Sbjct: 3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAY-EVLSN 58
>gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform a
[Homo sapiens]
Length = 277
Score = 38.1 bits (87), Expect = 0.014
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 52 YYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSA--TFIRIEKAYRKVLS 104
YY +L+V SAD++++++ + A Q+HPD + + A F + +AY +VLS
Sbjct: 4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAY-EVLS 57
>gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform b
[Homo sapiens]
Length = 324
Score = 38.1 bits (87), Expect = 0.014
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 52 YYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSA--TFIRIEKAYRKVLS 104
YY +L+V SAD++++++ + A Q+HPD + + A F + +AY +VLS
Sbjct: 4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAY-EVLS 57
>gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo
sapiens]
Length = 304
Score = 38.1 bits (87), Expect = 0.014
Identities = 35/181 (19%), Positives = 72/181 (39%), Gaps = 19/181 (10%)
Query: 51 EYYRLLNVEEGCSADEVRESFHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQT 110
+ Y LL +EE + EV++++ + A HPD + +A +VL+ +
Sbjct: 11 DLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALEVLTDAAARA 70
Query: 111 NASQSKGEEEEDVEKF-KYKTPQHRHYLSFEGIGFGTPTQREKHYRQFRADRAAEQVMEY 169
+ + +++ E+ K + + L E Q + + R+ R EQ +E
Sbjct: 71 AYDKVRKAKKQAAERTQKLDEKRKKVKLDLEARERQAQAQESEEEEESRSTRTLEQEIER 130
Query: 170 QKQKLQSQYFPDSVIVK-NIRQSKQQKITQAIERLVEDLIQESMAKGDFDNLSGKGKPLK 228
+++ Q +++ IRQ + Q++ +G +N G+G P
Sbjct: 131 LREEGSRQLEEQQRLIREQIRQERDQRL-----------------RGKAENTEGQGTPKL 173
Query: 229 K 229
K
Sbjct: 174 K 174
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,991,080
Number of Sequences: 37866
Number of extensions: 602555
Number of successful extensions: 2442
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 2317
Number of HSP's gapped (non-prelim): 198
length of query: 388
length of database: 18,247,518
effective HSP length: 104
effective length of query: 284
effective length of database: 14,309,454
effective search space: 4063884936
effective search space used: 4063884936
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.