Guide to the Human Genome
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Name: DNAJB5 Sequence: fasta or formatted (420aa) NCBI GI: 201862587
Description:

DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [382aa] DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 2
alt prot [348aa] DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         24           2
 C cysteine            1.2          5           1
 D aspartate           6.7         28           2
 E glutamate           5.7         24           2
 F phenylalanine       6.7         28           2
 G glycine             8.8         37           3
 H histidine           2.6         11           1
 I isoleucine          5.0         21           1
 K lysine              8.1         34           2
 L leucine             7.4         31           1
 M methionine          1.4          6           1
 N asparagine          2.9         12           1
 P proline             9.0         38           3
 Q glutamine           1.9          8           1
 R arginine            7.6         32           3
 S serine              5.5         23           2
 T threonine           5.2         22           1
 V valine              5.2         22           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform... 
DNAJB5                0.906   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.825   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB4                0.521   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJB1                0.496   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB13               0.328   testis spermatogenesis apoptosis-related protein 6 [...
DNAJA2                0.201   DnaJ subfamily A member 2 
DNAJA1                0.194   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJA4                0.183   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.183   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB11               0.153   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJA4                0.125   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB6                0.118   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.118   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJA3                0.110   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.110   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJB3                0.105   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB2                0.100   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.100   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB12               0.099   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.099   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB8                0.097   DnaJ homolog, subfamily B, member 8 
DNAJB7                0.096   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB9                0.092   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJC7                0.079   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.079   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJB14               0.078   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC18               0.078   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJC16               0.073   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJC5                0.072   DnaJ (Hsp40) homolog, subfamily C, member 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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