Guide to the Human Genome
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Name: DNAJC4 Sequence: fasta or formatted (241aa) NCBI GI: 157671935
Description:

DnaJ (Hsp40) homolog, subfamily C, member 4

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         16           3
 C cysteine            0.8          2           1
 D aspartate           2.9          7           2
 E glutamate           5.0         12           2
 F phenylalanine       2.9          7           2
 G glycine             6.2         15           1
 H histidine           4.1         10           1
 I isoleucine          2.1          5           2
 K lysine              4.1         10           1
 L leucine            10.0         24           3
 M methionine          2.1          5           1
 N asparagine          2.9          7           1
 P proline            10.4         25           3
 Q glutamine           8.3         20           3
 R arginine           11.2         27           2
 S serine              8.7         21           2
 T threonine           3.3          8           2
 V valine              3.7          9           1
 W tryptophan          1.2          3           1
 Y tyrosine            3.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily C, member 4 
DNAJA3                0.082   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.082   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJC10               0.082   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJB11               0.076   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJA2                0.074   DnaJ subfamily A member 2 
DNAJC30               0.074   DnaJ (Hsp40) homolog subfamily C member 30 
DNAJA1                0.069   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJB2                0.069   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.069   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB8                0.067   DnaJ homolog, subfamily B, member 8 
DNAJC5B               0.065   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJB4                0.063   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJA4                0.063   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.063   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB7                0.063   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB5                0.063   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.063   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.063   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJC17               0.063   DnaJ (Hsp40) homolog, subfamily C, member 17 
DNAJB1                0.061   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB9                0.061   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJC16               0.061   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJB6                0.059   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.059   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJC12               0.057   J domain containing protein 1 isoform b 
DNAJC12               0.057   J domain containing protein 1 isoform a 
DNAJB12               0.057   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.057   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB3                0.053   DnaJ (Hsp40) homolog, subfamily B, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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