Guide to the Human Genome
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Name: DNAH12 Sequence: fasta or formatted (457aa) NCBI GI: 89274173
Description:

dynein heavy chain domain 2 isoform 2

Referenced in:

Dynein and Dynactin

Other entries for this name:
alt prot [3092aa] dynein heavy chain domain 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         20           2
 C cysteine            0.9          4           1
 D aspartate           6.3         29           3
 E glutamate           9.2         42           2
 F phenylalanine       3.5         16           1
 G glycine             3.5         16           2
 H histidine           2.2         10           1
 I isoleucine          4.8         22           2
 K lysine              7.7         35           3
 L leucine            12.0         55           2
 M methionine          2.4         11           1
 N asparagine          4.6         21           1
 P proline             6.1         28           3
 Q glutamine           4.4         20           3
 R arginine            3.7         17           2
 S serine              5.9         27           2
 T threonine           6.6         30           2
 V valine              6.6         30           2
 W tryptophan          1.8          8           1
 Y tyrosine            3.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynein heavy chain domain 2 isoform 2 
DNAH12                0.968   dynein heavy chain domain 2 isoform 1 
DNAH7                 0.124   dynein, axonemal, heavy chain 7 
DNAH3                 0.067   dynein, axonemal, heavy chain 3 
DNAH17                0.013   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.013   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.013   PREDICTED: dynein, axonemal, heavy chain 17 
PDE9A                 0.008   phosphodiesterase 9A isoform f 
PDE9A                 0.008   phosphodiesterase 9A isoform b 
HAUS2                 0.008   centrosomal protein 27kDa isoform 2 
HAUS2                 0.008   centrosomal protein 27kDa isoform 1 
MYH3                  0.007   myosin, heavy chain 3, skeletal muscle, embryonic [H...
BRCA1                 0.007   breast cancer 1, early onset isoform 2 
BRCA1                 0.007   breast cancer 1, early onset isoform 3 
BRCA1                 0.007   breast cancer 1, early onset isoform 1 
DIDO1                 0.007   death inducer-obliterator 1 isoform c 
LRSAM1                0.006   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.006   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.006   leucine rich repeat and sterile alpha motif containi...
C10orf118             0.006   CTCL tumor antigen L14-2 
CEP72                 0.006   centrosomal protein 72 kDa 
ZNF532                0.006   zinc finger protein 532 
ESR1                  0.006   estrogen receptor alpha isoform 4 
ESR1                  0.006   estrogen receptor alpha isoform 3 
ESR1                  0.006   estrogen receptor alpha isoform 2 
ESR1                  0.006   estrogen receptor alpha isoform 1 
C1orf113              0.006   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.006   SH3 domain-containing protein C1orf113 isoform 2 [H...
CCDC110               0.006   coiled-coil domain containing 110 isoform b 
CCDC110               0.006   coiled-coil domain containing 110 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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